simulation_name simulation_name_here ! output files will carry this name + their specific ext tabulate_long_range 10000 ! denotes the granularity of long range tabulation, 0 means no tabulation energy_update_freq 1 ! frequency (in nuber of steps) of writes into the partial energy file nbrhood_cutoff 4.5 ! near neighbors cutoff for bond calculations in A hbond_cutoff 6.0 ! cutoff distance for hydrogen bond interactions bond_graph_cutoff 0.3 ! threshold in Angstrom used in determining what is a physical bond thb_cutoff 0.001 ! cutoff value for three body interactions write_freq 1 ! frequency (in nuber of steps) of writes into the trajectory file traj_title trajectory_title_here ! (no white spaces) Title of the trajectory - not the trajectory file atom_info 0 ! 0: no atom info, 1: print atomic positions + charge in the trajectory file atom_forces 0 ! 0: basic atom format, 1: print (add) forces on each atom in the trajectory file atom_velocities 0 ! 0: basic atom format, 1: print (add) the velocity of each atom in the trajectory file bond_info 0 ! 0: do not print bonds, 1: print bonds in the trajectory file angle_info 0 ! 0: do not print angles, 1: print angles in the trajectory file