kim init {modelname} metal unit_conversion_mode boundary f f f variable boxextent equal 25.0 region box block -${{boxextent}} ${{boxextent}} & -${{boxextent}} ${{boxextent}} & -${{boxextent}} ${{boxextent}} create_box 1 box create_atoms 1 single 0.0 0.0 0.0 change_box all x scale ${{_u_distance}} & y scale ${{_u_distance}} & z scale ${{_u_distance}} & remap variable mass_converted equal {mass}*${{_u_mass}} mass 1 ${{mass_converted}} atom_modify sort 0 0 kim interactions {symbol} # Use nsq neighlist method instead of binning since this is a small system variable neigh_skin equal 2.0*${{_u_distance}} neighbor ${{neigh_skin}} nsq # Variables used to rescale the positions and forces so that the quantities in the # dumpfile are in the original metal units (angstrom and eV/angstrom) even if we're # running with a Simulator Model that uses different units variable pe_metal equal "c_thermo_pe/v__u_energy" thermo_style custom v_pe_metal run 0 print "Isolated atom energy: ${{pe_metal}} eV"