# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.073291137814522*${_u_distance} variable latticeconst_converted equal 4.073291137814522*1 lattice fcc ${latticeconst_converted} lattice fcc 4.07329113781452 Lattice spacing in x,y,z = 4.07329 4.07329 4.07329 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (40.7329 40.7329 40.7329) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000509024 secs variable mass_converted equal 107.8682*${_u_mass} variable mass_converted equal 107.8682*1 kim_interactions Ag #=== BEGIN kim_interactions ================================== pair_style kim Morse_Shifted_GirifalcoWeizer_1959HighCutoff_Ag__MO_111986436268_004 pair_coeff * * Ag #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 107.8682 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 67582.8273956904 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 67582.8273956904/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 67582.8273956904/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 67582.8273956904/(1*1*${_u_distance}) variable V0_metal equal 67582.8273956904/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 67582.8273956904*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 67582.8273956904 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 12.3491 ghost atom cutoff = 12.3491 binsize = 6.17455, bins = 7 7 7 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 12.3491 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -11854.884 -11854.884 -12016.754 -12016.754 313.15 313.15 67582.827 67582.827 2558.2767 2558.2767 1000 -11679.9 -11679.9 -11846.163 -11846.163 321.64733 321.64733 68454.318 68454.318 -1175.0573 -1175.0573 Loop time of 38.4898 on 1 procs for 1000 steps with 4000 atoms Performance: 2.245 ns/day, 10.692 hours/ns, 25.981 timesteps/s 99.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.201 | 38.201 | 38.201 | 0.0 | 99.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.089202 | 0.089202 | 0.089202 | 0.0 | 0.23 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.17489 | 0.17489 | 0.17489 | 0.0 | 0.45 Other | | 0.02473 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.832e+06 ave 1.832e+06 max 1.832e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1832000 Ave neighs/atom = 458 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -11679.9 -11679.9 -11846.163 -11846.163 321.64733 321.64733 68454.318 68454.318 -1175.0573 -1175.0573 2000 -11694.459 -11694.459 -11857.58 -11857.58 315.56878 315.56878 68322.525 68322.525 122.05531 122.05531 Loop time of 35.3736 on 1 procs for 1000 steps with 4000 atoms Performance: 2.442 ns/day, 9.826 hours/ns, 28.270 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.11 | 35.11 | 35.11 | 0.0 | 99.26 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079648 | 0.079648 | 0.079648 | 0.0 | 0.23 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.16116 | 0.16116 | 0.16116 | 0.0 | 0.46 Other | | 0.02229 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13408 ave 13408 max 13408 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80572e+06 ave 1.80572e+06 max 1.80572e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1805722 Ave neighs/atom = 451.43 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -11694.459 -11694.459 -11857.58 -11857.58 315.56878 315.56878 68322.525 68322.525 122.05531 122.05531 3000 -11688.19 -11688.19 -11852.027 -11852.027 316.95405 316.95405 68359.036 68359.036 -114.49147 -114.49147 Loop time of 39.4094 on 1 procs for 1000 steps with 4000 atoms Performance: 2.192 ns/day, 10.947 hours/ns, 25.375 timesteps/s 96.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.126 | 39.126 | 39.126 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.086674 | 0.086674 | 0.086674 | 0.0 | 0.22 Output | 5.5075e-05 | 5.5075e-05 | 5.5075e-05 | 0.0 | 0.00 Modify | 0.17287 | 0.17287 | 0.17287 | 0.0 | 0.44 Other | | 0.02399 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13509 ave 13509 max 13509 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80966e+06 ave 1.80966e+06 max 1.80966e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1809660 Ave neighs/atom = 452.415 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -11688.19 -11688.19 -11852.027 -11852.027 316.95405 316.95405 68359.036 68359.036 -114.49147 -114.49147 4000 -11688.554 -11688.554 -11848.82 -11848.82 310.04538 310.04538 68403.028 68403.028 -677.95911 -677.95911 Loop time of 90.7203 on 1 procs for 1000 steps with 4000 atoms Performance: 0.952 ns/day, 25.200 hours/ns, 11.023 timesteps/s 54.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 90.04 | 90.04 | 90.04 | 0.0 | 99.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15247 | 0.15247 | 0.15247 | 0.0 | 0.17 Output | 5.9843e-05 | 5.9843e-05 | 5.9843e-05 | 0.0 | 0.00 Modify | 0.45481 | 0.45481 | 0.45481 | 0.0 | 0.50 Other | | 0.07299 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13507 ave 13507 max 13507 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80813e+06 ave 1.80813e+06 max 1.80813e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1808130 Ave neighs/atom = 452.033 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -11688.554 -11688.554 -11848.82 -11848.82 310.04538 310.04538 68403.028 68403.028 -677.95911 -677.95911 5000 -11692.807 -11692.807 -11852.669 -11852.669 309.26347 309.26347 68266.1 68266.1 1175.5896 1175.5896 Loop time of 92.6838 on 1 procs for 1000 steps with 4000 atoms Performance: 0.932 ns/day, 25.745 hours/ns, 10.789 timesteps/s 53.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 92.062 | 92.062 | 92.062 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21618 | 0.21618 | 0.21618 | 0.0 | 0.23 Output | 6.1035e-05 | 6.1035e-05 | 6.1035e-05 | 0.0 | 0.00 Modify | 0.37415 | 0.37415 | 0.37415 | 0.0 | 0.40 Other | | 0.03111 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13477 ave 13477 max 13477 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80724e+06 ave 1.80724e+06 max 1.80724e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1807240 Ave neighs/atom = 451.81 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 310.639620356872, Press = -48.2887930002476 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -11692.807 -11692.807 -11852.669 -11852.669 309.26347 309.26347 68266.1 68266.1 1175.5896 1175.5896 6000 -11688.821 -11688.821 -11851.512 -11851.512 314.73758 314.73758 68431.195 68431.195 -1169.7707 -1169.7707 Loop time of 83.8112 on 1 procs for 1000 steps with 4000 atoms Performance: 1.031 ns/day, 23.281 hours/ns, 11.932 timesteps/s 58.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 83.232 | 83.232 | 83.232 | 0.0 | 99.31 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17377 | 0.17377 | 0.17377 | 0.0 | 0.21 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.37438 | 0.37438 | 0.37438 | 0.0 | 0.45 Other | | 0.03084 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13566 ave 13566 max 13566 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.81082e+06 ave 1.81082e+06 max 1.81082e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1810816 Ave neighs/atom = 452.704 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.35631538823, Press = 6.53665599143443 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -11688.821 -11688.821 -11851.512 -11851.512 314.73758 314.73758 68431.195 68431.195 -1169.7707 -1169.7707 7000 -11689.551 -11689.551 -11852.512 -11852.512 315.25937 315.25937 68290.4 68290.4 888.55559 888.55559 Loop time of 119.158 on 1 procs for 1000 steps with 4000 atoms Performance: 0.725 ns/day, 33.099 hours/ns, 8.392 timesteps/s 41.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 118.25 | 118.25 | 118.25 | 0.0 | 99.24 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.29731 | 0.29731 | 0.29731 | 0.0 | 0.25 Output | 5.6028e-05 | 5.6028e-05 | 5.6028e-05 | 0.0 | 0.00 Modify | 0.55634 | 0.55634 | 0.55634 | 0.0 | 0.47 Other | | 0.05563 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13532 ave 13532 max 13532 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80678e+06 ave 1.80678e+06 max 1.80678e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1806784 Ave neighs/atom = 451.696 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.916576893979, Press = -8.95723504800902 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -11689.551 -11689.551 -11852.512 -11852.512 315.25937 315.25937 68290.4 68290.4 888.55559 888.55559 8000 -11688.969 -11688.969 -11851.14 -11851.14 313.73166 313.73166 68394.565 68394.565 -615.24057 -615.24057 Loop time of 109.139 on 1 procs for 1000 steps with 4000 atoms Performance: 0.792 ns/day, 30.316 hours/ns, 9.163 timesteps/s 44.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 108.26 | 108.26 | 108.26 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24615 | 0.24615 | 0.24615 | 0.0 | 0.23 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.56995 | 0.56995 | 0.56995 | 0.0 | 0.52 Other | | 0.06478 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13573 ave 13573 max 13573 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80982e+06 ave 1.80982e+06 max 1.80982e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1809816 Ave neighs/atom = 452.454 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.97046437947, Press = 3.33022866145972 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -11688.969 -11688.969 -11851.14 -11851.14 313.73166 313.73166 68394.565 68394.565 -615.24057 -615.24057 9000 -11691.049 -11691.049 -11852.045 -11852.045 311.45765 311.45765 68341.409 68341.409 105.25176 105.25176 Loop time of 108.83 on 1 procs for 1000 steps with 4000 atoms Performance: 0.794 ns/day, 30.231 hours/ns, 9.189 timesteps/s 45.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 108 | 108 | 108 | 0.0 | 99.23 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23415 | 0.23415 | 0.23415 | 0.0 | 0.22 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.48465 | 0.48465 | 0.48465 | 0.0 | 0.45 Other | | 0.1151 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13441 ave 13441 max 13441 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80739e+06 ave 1.80739e+06 max 1.80739e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1807390 Ave neighs/atom = 451.848 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.916105219293, Press = -1.39617805358596 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -11691.049 -11691.049 -11852.045 -11852.045 311.45765 311.45765 68341.409 68341.409 105.25176 105.25176 10000 -11688.189 -11688.189 -11851.522 -11851.522 315.97872 315.97872 68360.397 68360.397 -101.70964 -101.70964 Loop time of 111.242 on 1 procs for 1000 steps with 4000 atoms Performance: 0.777 ns/day, 30.901 hours/ns, 8.989 timesteps/s 44.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.46 | 110.46 | 110.46 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22725 | 0.22725 | 0.22725 | 0.0 | 0.20 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.44171 | 0.44171 | 0.44171 | 0.0 | 0.40 Other | | 0.1142 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13481 ave 13481 max 13481 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80844e+06 ave 1.80844e+06 max 1.80844e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1808436 Ave neighs/atom = 452.109 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.908608649679, Press = -3.44672243248269 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -11688.189 -11688.189 -11851.522 -11851.522 315.97872 315.97872 68360.397 68360.397 -101.70964 -101.70964 11000 -11693.171 -11693.171 -11854.929 -11854.929 312.9328 312.9328 68351.086 68351.086 -170.44313 -170.44313 Loop time of 110.388 on 1 procs for 1000 steps with 4000 atoms Performance: 0.783 ns/day, 30.663 hours/ns, 9.059 timesteps/s 44.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 109.62 | 109.62 | 109.62 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20451 | 0.20451 | 0.20451 | 0.0 | 0.19 Output | 4.4823e-05 | 4.4823e-05 | 4.4823e-05 | 0.0 | 0.00 Modify | 0.502 | 0.502 | 0.502 | 0.0 | 0.45 Other | | 0.0628 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13482 ave 13482 max 13482 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80821e+06 ave 1.80821e+06 max 1.80821e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1808206 Ave neighs/atom = 452.051 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.753076874539, Press = 5.5023483164694 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -11693.171 -11693.171 -11854.929 -11854.929 312.9328 312.9328 68351.086 68351.086 -170.44313 -170.44313 12000 -11687.289 -11687.289 -11850.98 -11850.98 316.67071 316.67071 68369.512 68369.512 -179.9623 -179.9623 Loop time of 102.267 on 1 procs for 1000 steps with 4000 atoms Performance: 0.845 ns/day, 28.408 hours/ns, 9.778 timesteps/s 47.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 101.51 | 101.51 | 101.51 | 0.0 | 99.26 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2169 | 0.2169 | 0.2169 | 0.0 | 0.21 Output | 4.9114e-05 | 4.9114e-05 | 4.9114e-05 | 0.0 | 0.00 Modify | 0.48196 | 0.48196 | 0.48196 | 0.0 | 0.47 Other | | 0.06082 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13529 ave 13529 max 13529 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80884e+06 ave 1.80884e+06 max 1.80884e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1808844 Ave neighs/atom = 452.211 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.829048945709, Press = -8.61122526441526 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -11687.289 -11687.289 -11850.98 -11850.98 316.67071 316.67071 68369.512 68369.512 -179.9623 -179.9623 13000 -11691.031 -11691.031 -11851.716 -11851.716 310.85503 310.85503 68331.127 68331.127 300.11211 300.11211 Loop time of 96.8404 on 1 procs for 1000 steps with 4000 atoms Performance: 0.892 ns/day, 26.900 hours/ns, 10.326 timesteps/s 50.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 96.114 | 96.114 | 96.114 | 0.0 | 99.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24829 | 0.24829 | 0.24829 | 0.0 | 0.26 Output | 4.8161e-05 | 4.8161e-05 | 4.8161e-05 | 0.0 | 0.00 Modify | 0.41582 | 0.41582 | 0.41582 | 0.0 | 0.43 Other | | 0.06268 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13578 ave 13578 max 13578 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80812e+06 ave 1.80812e+06 max 1.80812e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1808118 Ave neighs/atom = 452.029 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.865853411671, Press = 2.96738001383139 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -11691.031 -11691.031 -11851.716 -11851.716 310.85503 310.85503 68331.127 68331.127 300.11211 300.11211 14000 -11686.5 -11686.5 -11849.827 -11849.827 315.96787 315.96787 68364.963 68364.963 -59.767579 -59.767579 Loop time of 101.36 on 1 procs for 1000 steps with 4000 atoms Performance: 0.852 ns/day, 28.155 hours/ns, 9.866 timesteps/s 48.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 100.68 | 100.68 | 100.68 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17437 | 0.17437 | 0.17437 | 0.0 | 0.17 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.4463 | 0.4463 | 0.4463 | 0.0 | 0.44 Other | | 0.06147 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13623 ave 13623 max 13623 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.8095e+06 ave 1.8095e+06 max 1.8095e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1809498 Ave neighs/atom = 452.375 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.981467138565, Press = -3.83140302247579 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -11686.5 -11686.5 -11849.827 -11849.827 315.96787 315.96787 68364.963 68364.963 -59.767579 -59.767579 15000 -11692.025 -11692.025 -11853.491 -11853.491 312.36849 312.36849 68336.755 68336.755 121.96053 121.96053 Loop time of 112.242 on 1 procs for 1000 steps with 4000 atoms Performance: 0.770 ns/day, 31.178 hours/ns, 8.909 timesteps/s 43.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 111.56 | 111.56 | 111.56 | 0.0 | 99.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23343 | 0.23343 | 0.23343 | 0.0 | 0.21 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.37592 | 0.37592 | 0.37592 | 0.0 | 0.33 Other | | 0.06969 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13543 ave 13543 max 13543 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80846e+06 ave 1.80846e+06 max 1.80846e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1808464 Ave neighs/atom = 452.116 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.930559731941, Press = 0.583767536339692 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -11692.025 -11692.025 -11853.491 -11853.491 312.36849 312.36849 68336.755 68336.755 121.96053 121.96053 16000 -11692.007 -11692.007 -11854.223 -11854.223 313.81668 313.81668 68341.677 68341.677 14.7495 14.7495 Loop time of 97.9326 on 1 procs for 1000 steps with 4000 atoms Performance: 0.882 ns/day, 27.203 hours/ns, 10.211 timesteps/s 50.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 97.22 | 97.22 | 97.22 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19319 | 0.19319 | 0.19319 | 0.0 | 0.20 Output | 4.5776e-05 | 4.5776e-05 | 4.5776e-05 | 0.0 | 0.00 Modify | 0.44939 | 0.44939 | 0.44939 | 0.0 | 0.46 Other | | 0.06973 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13541 ave 13541 max 13541 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80896e+06 ave 1.80896e+06 max 1.80896e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1808958 Ave neighs/atom = 452.24 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.794128235585, Press = -0.836517983775524 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -11692.007 -11692.007 -11854.223 -11854.223 313.81668 313.81668 68341.677 68341.677 14.7495 14.7495 17000 -11689.568 -11689.568 -11853.361 -11853.361 316.86959 316.86959 68377.31 68377.31 -446.16074 -446.16074 Loop time of 106.542 on 1 procs for 1000 steps with 4000 atoms Performance: 0.811 ns/day, 29.595 hours/ns, 9.386 timesteps/s 46.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 105.68 | 105.68 | 105.68 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.27129 | 0.27129 | 0.27129 | 0.0 | 0.25 Output | 0.013081 | 0.013081 | 0.013081 | 0.0 | 0.01 Modify | 0.51785 | 0.51785 | 0.51785 | 0.0 | 0.49 Other | | 0.05698 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13497 ave 13497 max 13497 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80906e+06 ave 1.80906e+06 max 1.80906e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1809064 Ave neighs/atom = 452.266 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.711087935994, Press = -0.0110117931935576 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -11689.568 -11689.568 -11853.361 -11853.361 316.86959 316.86959 68377.31 68377.31 -446.16074 -446.16074 18000 -11690.319 -11690.319 -11852.118 -11852.118 313.01116 313.01116 68309.415 68309.415 607.50902 607.50902 Loop time of 109.563 on 1 procs for 1000 steps with 4000 atoms Performance: 0.789 ns/day, 30.434 hours/ns, 9.127 timesteps/s 44.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 108.81 | 108.81 | 108.81 | 0.0 | 99.31 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25144 | 0.25144 | 0.25144 | 0.0 | 0.23 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.46633 | 0.46633 | 0.46633 | 0.0 | 0.43 Other | | 0.03662 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13435 ave 13435 max 13435 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80781e+06 ave 1.80781e+06 max 1.80781e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1807812 Ave neighs/atom = 451.953 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.784880875541, Press = -0.212891941170887 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -11690.319 -11690.319 -11852.118 -11852.118 313.01116 313.01116 68309.415 68309.415 607.50902 607.50902 19000 -11690.57 -11690.57 -11852.269 -11852.269 312.81654 312.81654 68430.443 68430.443 -1190.9254 -1190.9254 Loop time of 110.246 on 1 procs for 1000 steps with 4000 atoms Performance: 0.784 ns/day, 30.624 hours/ns, 9.071 timesteps/s 44.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 109.39 | 109.39 | 109.39 | 0.0 | 99.23 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21523 | 0.21523 | 0.21523 | 0.0 | 0.20 Output | 3.7193e-05 | 3.7193e-05 | 3.7193e-05 | 0.0 | 0.00 Modify | 0.57298 | 0.57298 | 0.57298 | 0.0 | 0.52 Other | | 0.06557 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13583 ave 13583 max 13583 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80946e+06 ave 1.80946e+06 max 1.80946e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1809464 Ave neighs/atom = 452.366 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.884690018258, Press = -1.88424105805819 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -11690.57 -11690.57 -11852.269 -11852.269 312.81654 312.81654 68430.443 68430.443 -1190.9254 -1190.9254 20000 -11694.977 -11694.977 -11854.067 -11854.067 307.77025 307.77025 68250.863 68250.863 1296.3933 1296.3933 Loop time of 101.149 on 1 procs for 1000 steps with 4000 atoms Performance: 0.854 ns/day, 28.097 hours/ns, 9.886 timesteps/s 48.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 100.3 | 100.3 | 100.3 | 0.0 | 99.16 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26909 | 0.26909 | 0.26909 | 0.0 | 0.27 Output | 4.4107e-05 | 4.4107e-05 | 4.4107e-05 | 0.0 | 0.00 Modify | 0.52109 | 0.52109 | 0.52109 | 0.0 | 0.52 Other | | 0.05946 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13550 ave 13550 max 13550 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80684e+06 ave 1.80684e+06 max 1.80684e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1806838 Ave neighs/atom = 451.709 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.900428919244, Press = 1.32101740891319 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -11694.977 -11694.977 -11854.067 -11854.067 307.77025 307.77025 68250.863 68250.863 1296.3933 1296.3933 21000 -11692.304 -11692.304 -11853.709 -11853.709 312.24886 312.24886 68428.536 68428.536 -1263.4894 -1263.4894 Loop time of 99.4264 on 1 procs for 1000 steps with 4000 atoms Performance: 0.869 ns/day, 27.618 hours/ns, 10.058 timesteps/s 49.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 98.666 | 98.666 | 98.666 | 0.0 | 99.24 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19773 | 0.19773 | 0.19773 | 0.0 | 0.20 Output | 3.7909e-05 | 3.7909e-05 | 3.7909e-05 | 0.0 | 0.00 Modify | 0.50586 | 0.50586 | 0.50586 | 0.0 | 0.51 Other | | 0.05673 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13670 ave 13670 max 13670 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.81133e+06 ave 1.81133e+06 max 1.81133e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1811328 Ave neighs/atom = 452.832 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.884529143452, Press = -1.16909881422892 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -11692.304 -11692.304 -11853.709 -11853.709 312.24886 312.24886 68428.536 68428.536 -1263.4894 -1263.4894 22000 -11689.812 -11689.812 -11853.202 -11853.202 316.08745 316.08745 68282.697 68282.697 946.59951 946.59951 Loop time of 110.881 on 1 procs for 1000 steps with 4000 atoms Performance: 0.779 ns/day, 30.800 hours/ns, 9.019 timesteps/s 44.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.05 | 110.05 | 110.05 | 0.0 | 99.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25859 | 0.25859 | 0.25859 | 0.0 | 0.23 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.50167 | 0.50167 | 0.50167 | 0.0 | 0.45 Other | | 0.0701 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13597 ave 13597 max 13597 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80713e+06 ave 1.80713e+06 max 1.80713e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1807132 Ave neighs/atom = 451.783 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.852162228149, Press = -0.10575823567707 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -11689.812 -11689.812 -11853.202 -11853.202 316.08745 316.08745 68282.697 68282.697 946.59951 946.59951 23000 -11693.656 -11693.656 -11853.907 -11853.907 310.01547 310.01547 68376.308 68376.308 -522.15582 -522.15582 Loop time of 104.132 on 1 procs for 1000 steps with 4000 atoms Performance: 0.830 ns/day, 28.926 hours/ns, 9.603 timesteps/s 46.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 103.31 | 103.31 | 103.31 | 0.0 | 99.21 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2057 | 0.2057 | 0.2057 | 0.0 | 0.20 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.50559 | 0.50559 | 0.50559 | 0.0 | 0.49 Other | | 0.1138 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13532 ave 13532 max 13532 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.81051e+06 ave 1.81051e+06 max 1.81051e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1810506 Ave neighs/atom = 452.627 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.873600419041, Press = -0.470486304153872 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -11693.656 -11693.656 -11853.907 -11853.907 310.01547 310.01547 68376.308 68376.308 -522.15582 -522.15582 24000 -11689.828 -11689.828 -11852.709 -11852.709 315.10535 315.10535 68346.202 68346.202 60.055363 60.055363 Loop time of 102.59 on 1 procs for 1000 steps with 4000 atoms Performance: 0.842 ns/day, 28.497 hours/ns, 9.748 timesteps/s 47.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 101.87 | 101.87 | 101.87 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21049 | 0.21049 | 0.21049 | 0.0 | 0.21 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.47972 | 0.47972 | 0.47972 | 0.0 | 0.47 Other | | 0.03008 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13501 ave 13501 max 13501 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80836e+06 ave 1.80836e+06 max 1.80836e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1808356 Ave neighs/atom = 452.089 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.955852931211, Press = -0.53299753138998 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 13.12 | 13.12 | 13.12 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -11689.828 -11689.828 -11852.709 -11852.709 315.10535 315.10535 68346.202 68346.202 60.055363 60.055363 25000 -11687.107 -11687.107 -11852.08 -11852.08 319.15038 319.15038 68372.888 68372.888 -308.73216 -308.73216 Loop time of 102.226 on 1 procs for 1000 steps with 4000 atoms Performance: 0.845 ns/day, 28.396 hours/ns, 9.782 timesteps/s 47.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 101.36 | 101.36 | 101.36 | 0.0 | 99.15 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.32027 | 0.32027 | 0.32027 | 0.0 | 0.31 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.51669 | 0.51669 | 0.51669 | 0.0 | 0.51 Other | | 0.03057 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13523 ave 13523 max 13523 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.80894e+06 ave 1.80894e+06 max 1.80894e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1808944 Ave neighs/atom = 452.236 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 68350.8651316164 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0