# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.090000152587891*${_u_distance} variable latticeconst_converted equal 4.090000152587891*1 lattice fcc ${latticeconst_converted} lattice fcc 4.09000015258789 Lattice spacing in x,y,z = 4.09 4.09 4.09 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (40.9 40.9 40.9) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.0304911 secs variable mass_converted equal 107.8682*${_u_mass} variable mass_converted equal 107.8682*1 # specify which KIM Model to use pair_style kim EAM_Dynamo_WilliamsMishinHamilton_2006_CuAg__MO_128703483589_005 pair_coeff * * Ag mass 1 ${mass_converted} mass 1 107.8682 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 68417.9366575167 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 68417.9366575167/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 68417.9366575167/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 68417.9366575167/(1*1*${_u_distance}) variable V0_metal equal 68417.9366575167/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 68417.9366575167*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 68417.9366575167 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 273.15*${_u_temperature} variable temp_converted equal 273.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 273.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "273.15 - 0.2" variable T_up equal "273.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.99501 ghost atom cutoff = 7.99501 binsize = 3.99751, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.99501 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -11258.806 -11258.806 -11400 -11400 273.15 273.15 68417.937 68417.937 2204.2726 2204.2726 1000 -11113.499 -11113.499 -11256.839 -11256.839 277.30129 277.30129 69526.131 69526.131 923.38043 923.38043 Loop time of 28.2969 on 1 procs for 1000 steps with 4000 atoms Performance: 3.053 ns/day, 7.860 hours/ns, 35.340 timesteps/s 36.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.637 | 27.637 | 27.637 | 0.0 | 97.67 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13886 | 0.13886 | 0.13886 | 0.0 | 0.49 Output | 4.5776e-05 | 4.5776e-05 | 4.5776e-05 | 0.0 | 0.00 Modify | 0.44036 | 0.44036 | 0.44036 | 0.0 | 1.56 Other | | 0.08035 | | | 0.28 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536000 ave 536000 max 536000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536000 Ave neighs/atom = 134 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -11113.499 -11113.499 -11256.839 -11256.839 277.30129 277.30129 69526.131 69526.131 923.38043 923.38043 2000 -11125.769 -11125.769 -11265.031 -11265.031 269.41137 269.41137 69533.588 69533.588 -227.23484 -227.23484 Loop time of 30.5711 on 1 procs for 1000 steps with 4000 atoms Performance: 2.826 ns/day, 8.492 hours/ns, 32.711 timesteps/s 36.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.015 | 30.015 | 30.015 | 0.0 | 98.18 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.07884 | 0.07884 | 0.07884 | 0.0 | 0.26 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.45727 | 0.45727 | 0.45727 | 0.0 | 1.50 Other | | 0.02006 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5856 ave 5856 max 5856 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535324 ave 535324 max 535324 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535324 Ave neighs/atom = 133.831 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -11125.769 -11125.769 -11265.031 -11265.031 269.41137 269.41137 69533.588 69533.588 -227.23484 -227.23484 3000 -11118.544 -11118.544 -11262.02 -11262.02 277.56477 277.56477 69505.195 69505.195 741.94606 741.94606 Loop time of 31.3633 on 1 procs for 1000 steps with 4000 atoms Performance: 2.755 ns/day, 8.712 hours/ns, 31.884 timesteps/s 35.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.797 | 30.797 | 30.797 | 0.0 | 98.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12897 | 0.12897 | 0.12897 | 0.0 | 0.41 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.3972 | 0.3972 | 0.3972 | 0.0 | 1.27 Other | | 0.04023 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5858 ave 5858 max 5858 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535514 ave 535514 max 535514 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535514 Ave neighs/atom = 133.879 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -11118.544 -11118.544 -11262.02 -11262.02 277.56477 277.56477 69505.195 69505.195 741.94606 741.94606 4000 -11122.575 -11122.575 -11263.273 -11263.273 272.18891 272.18891 69517.847 69517.847 257.75883 257.75883 Loop time of 30.6387 on 1 procs for 1000 steps with 4000 atoms Performance: 2.820 ns/day, 8.511 hours/ns, 32.638 timesteps/s 35.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.002 | 30.002 | 30.002 | 0.0 | 97.92 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.078644 | 0.078644 | 0.078644 | 0.0 | 0.26 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.4777 | 0.4777 | 0.4777 | 0.0 | 1.56 Other | | 0.08029 | | | 0.26 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5849 ave 5849 max 5849 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535434 ave 535434 max 535434 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535434 Ave neighs/atom = 133.858 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -11122.575 -11122.575 -11263.273 -11263.273 272.18891 272.18891 69517.847 69517.847 257.75883 257.75883 5000 -11124.265 -11124.265 -11265.609 -11265.609 273.44007 273.44007 69523.307 69523.307 -40.714466 -40.714466 Loop time of 29.4413 on 1 procs for 1000 steps with 4000 atoms Performance: 2.935 ns/day, 8.178 hours/ns, 33.966 timesteps/s 37.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.815 | 28.815 | 28.815 | 0.0 | 97.87 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.068171 | 0.068171 | 0.068171 | 0.0 | 0.23 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.51771 | 0.51771 | 0.51771 | 0.0 | 1.76 Other | | 0.04009 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5857 ave 5857 max 5857 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535508 ave 535508 max 535508 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535508 Ave neighs/atom = 133.877 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 269.016642959976, Press = 142.17575522791 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -11124.265 -11124.265 -11265.609 -11265.609 273.44007 273.44007 69523.307 69523.307 -40.714466 -40.714466 6000 -11119.855 -11119.855 -11263.338 -11263.338 277.57865 277.57865 69511.122 69511.122 424.95369 424.95369 Loop time of 29.0864 on 1 procs for 1000 steps with 4000 atoms Performance: 2.970 ns/day, 8.080 hours/ns, 34.380 timesteps/s 37.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.363 | 28.363 | 28.363 | 0.0 | 97.51 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16867 | 0.16867 | 0.16867 | 0.0 | 0.58 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.51397 | 0.51397 | 0.51397 | 0.0 | 1.77 Other | | 0.04052 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5857 ave 5857 max 5857 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535496 ave 535496 max 535496 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535496 Ave neighs/atom = 133.874 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.977928341173, Press = -0.899137202369053 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -11119.855 -11119.855 -11263.338 -11263.338 277.57865 277.57865 69511.122 69511.122 424.95369 424.95369 7000 -11122.639 -11122.639 -11264.828 -11264.828 275.07409 275.07409 69395.575 69395.575 2136.4627 2136.4627 Loop time of 29.5355 on 1 procs for 1000 steps with 4000 atoms Performance: 2.925 ns/day, 8.204 hours/ns, 33.858 timesteps/s 37.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.917 | 28.917 | 28.917 | 0.0 | 97.91 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.078823 | 0.078823 | 0.078823 | 0.0 | 0.27 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.47919 | 0.47919 | 0.47919 | 0.0 | 1.62 Other | | 0.06036 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5849 ave 5849 max 5849 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535498 ave 535498 max 535498 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535498 Ave neighs/atom = 133.875 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.961939021014, Press = 3.39413665095422 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -11122.639 -11122.639 -11264.828 -11264.828 275.07409 275.07409 69395.575 69395.575 2136.4627 2136.4627 8000 -11122.039 -11122.039 -11262.359 -11262.359 271.45733 271.45733 69550.7 69550.7 -53.583302 -53.583302 Loop time of 30.4647 on 1 procs for 1000 steps with 4000 atoms Performance: 2.836 ns/day, 8.462 hours/ns, 32.825 timesteps/s 36.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.932 | 29.932 | 29.932 | 0.0 | 98.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12688 | 0.12688 | 0.12688 | 0.0 | 0.42 Output | 2.718e-05 | 2.718e-05 | 2.718e-05 | 0.0 | 0.00 Modify | 0.33499 | 0.33499 | 0.33499 | 0.0 | 1.10 Other | | 0.07057 | | | 0.23 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5848 ave 5848 max 5848 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535852 ave 535852 max 535852 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535852 Ave neighs/atom = 133.963 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.019260585852, Press = -0.293087618671244 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -11122.039 -11122.039 -11262.359 -11262.359 271.45733 271.45733 69550.7 69550.7 -53.583302 -53.583302 9000 -11119.211 -11119.211 -11261.528 -11261.528 275.32268 275.32268 69526.684 69526.684 412.10309 412.10309 Loop time of 29.8619 on 1 procs for 1000 steps with 4000 atoms Performance: 2.893 ns/day, 8.295 hours/ns, 33.487 timesteps/s 37.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.286 | 29.286 | 29.286 | 0.0 | 98.07 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11328 | 0.11328 | 0.11328 | 0.0 | 0.38 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.40225 | 0.40225 | 0.40225 | 0.0 | 1.35 Other | | 0.06088 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5849 ave 5849 max 5849 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535436 ave 535436 max 535436 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535436 Ave neighs/atom = 133.859 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.037857850713, Press = 2.89742165144923 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -11119.211 -11119.211 -11261.528 -11261.528 275.32268 275.32268 69526.684 69526.684 412.10309 412.10309 10000 -11126.07 -11126.07 -11264.654 -11264.654 268.09989 268.09989 69573.761 69573.761 -749.12877 -749.12877 Loop time of 28.0867 on 1 procs for 1000 steps with 4000 atoms Performance: 3.076 ns/day, 7.802 hours/ns, 35.604 timesteps/s 39.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.685 | 27.685 | 27.685 | 0.0 | 98.57 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.078536 | 0.078536 | 0.078536 | 0.0 | 0.28 Output | 7.987e-05 | 7.987e-05 | 7.987e-05 | 0.0 | 0.00 Modify | 0.30306 | 0.30306 | 0.30306 | 0.0 | 1.08 Other | | 0.0201 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5848 ave 5848 max 5848 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535492 ave 535492 max 535492 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535492 Ave neighs/atom = 133.873 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.848259519238, Press = 1.81655192845257 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -11126.07 -11126.07 -11264.654 -11264.654 268.09989 268.09989 69573.761 69573.761 -749.12877 -749.12877 11000 -11125.688 -11125.688 -11262.965 -11262.965 265.57237 265.57237 69526.991 69526.991 119.06347 119.06347 Loop time of 31.0282 on 1 procs for 1000 steps with 4000 atoms Performance: 2.785 ns/day, 8.619 hours/ns, 32.229 timesteps/s 35.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.486 | 30.486 | 30.486 | 0.0 | 98.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098526 | 0.098526 | 0.098526 | 0.0 | 0.32 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.38281 | 0.38281 | 0.38281 | 0.0 | 1.23 Other | | 0.0604 | | | 0.19 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5856 ave 5856 max 5856 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535484 ave 535484 max 535484 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535484 Ave neighs/atom = 133.871 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.786896755914, Press = -2.10444491528818 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -11125.688 -11125.688 -11262.965 -11262.965 265.57237 265.57237 69526.991 69526.991 119.06347 119.06347 12000 -11121.345 -11121.345 -11263.432 -11263.432 274.87791 274.87791 69471.384 69471.384 1032.971 1032.971 Loop time of 28.2698 on 1 procs for 1000 steps with 4000 atoms Performance: 3.056 ns/day, 7.853 hours/ns, 35.373 timesteps/s 39.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.756 | 27.756 | 27.756 | 0.0 | 98.18 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.078707 | 0.078707 | 0.078707 | 0.0 | 0.28 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.39527 | 0.39527 | 0.39527 | 0.0 | 1.40 Other | | 0.04013 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5857 ave 5857 max 5857 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535368 ave 535368 max 535368 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535368 Ave neighs/atom = 133.842 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.745383808078, Press = -3.84124316213764 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -11121.345 -11121.345 -11263.432 -11263.432 274.87791 274.87791 69471.384 69471.384 1032.971 1032.971 13000 -11121.512 -11121.512 -11263.024 -11263.024 273.76483 273.76483 69490.134 69490.134 801.22999 801.22999 Loop time of 29.8462 on 1 procs for 1000 steps with 4000 atoms Performance: 2.895 ns/day, 8.291 hours/ns, 33.505 timesteps/s 37.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.251 | 29.251 | 29.251 | 0.0 | 98.01 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11878 | 0.11878 | 0.11878 | 0.0 | 0.40 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.45606 | 0.45606 | 0.45606 | 0.0 | 1.53 Other | | 0.02048 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5856 ave 5856 max 5856 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535572 ave 535572 max 535572 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535572 Ave neighs/atom = 133.893 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.80662190257, Press = 1.05049655553376 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -11121.512 -11121.512 -11263.024 -11263.024 273.76483 273.76483 69490.134 69490.134 801.22999 801.22999 14000 -11120.703 -11120.703 -11264.486 -11264.486 278.15792 278.15792 69533.258 69533.258 -44.851533 -44.851533 Loop time of 29.6734 on 1 procs for 1000 steps with 4000 atoms Performance: 2.912 ns/day, 8.243 hours/ns, 33.700 timesteps/s 37.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.009 | 29.009 | 29.009 | 0.0 | 97.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11915 | 0.11915 | 0.11915 | 0.0 | 0.40 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.50443 | 0.50443 | 0.50443 | 0.0 | 1.70 Other | | 0.04035 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5843 ave 5843 max 5843 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535528 ave 535528 max 535528 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535528 Ave neighs/atom = 133.882 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.775088549094, Press = 1.58759234725609 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -11120.703 -11120.703 -11264.486 -11264.486 278.15792 278.15792 69533.258 69533.258 -44.851533 -44.851533 15000 -11122.73 -11122.73 -11263.841 -11263.841 272.98961 272.98961 69569.542 69569.542 -538.675 -538.675 Loop time of 29.3042 on 1 procs for 1000 steps with 4000 atoms Performance: 2.948 ns/day, 8.140 hours/ns, 34.125 timesteps/s 37.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.699 | 28.699 | 28.699 | 0.0 | 97.94 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13118 | 0.13118 | 0.13118 | 0.0 | 0.45 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.45339 | 0.45339 | 0.45339 | 0.0 | 1.55 Other | | 0.02021 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5844 ave 5844 max 5844 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535468 ave 535468 max 535468 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535468 Ave neighs/atom = 133.867 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.671555316325, Press = 1.21920576069376 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -11122.73 -11122.73 -11263.841 -11263.841 272.98961 272.98961 69569.542 69569.542 -538.675 -538.675 16000 -11121.723 -11121.723 -11261.355 -11261.355 270.12933 270.12933 69589.323 69589.323 -611.07581 -611.07581 Loop time of 28.7606 on 1 procs for 1000 steps with 4000 atoms Performance: 3.004 ns/day, 7.989 hours/ns, 34.770 timesteps/s 38.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.171 | 28.171 | 28.171 | 0.0 | 97.95 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10016 | 0.10016 | 0.10016 | 0.0 | 0.35 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.39914 | 0.39914 | 0.39914 | 0.0 | 1.39 Other | | 0.09044 | | | 0.31 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5852 ave 5852 max 5852 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535590 ave 535590 max 535590 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535590 Ave neighs/atom = 133.898 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.647246431574, Press = -0.920204720021084 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -11121.723 -11121.723 -11261.355 -11261.355 270.12933 270.12933 69589.323 69589.323 -611.07581 -611.07581 17000 -11121.372 -11121.372 -11261.475 -11261.475 271.04009 271.04009 69538.932 69538.932 188.55183 188.55183 Loop time of 28.3731 on 1 procs for 1000 steps with 4000 atoms Performance: 3.045 ns/day, 7.881 hours/ns, 35.245 timesteps/s 38.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.731 | 27.731 | 27.731 | 0.0 | 97.74 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.099024 | 0.099024 | 0.099024 | 0.0 | 0.35 Output | 0.020063 | 0.020063 | 0.020063 | 0.0 | 0.07 Modify | 0.42281 | 0.42281 | 0.42281 | 0.0 | 1.49 Other | | 0.1007 | | | 0.35 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5864 ave 5864 max 5864 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535340 ave 535340 max 535340 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535340 Ave neighs/atom = 133.835 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.622399454172, Press = 1.32307661064781 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -11121.372 -11121.372 -11261.475 -11261.475 271.04009 271.04009 69538.932 69538.932 188.55183 188.55183 18000 -11120.189 -11120.189 -11262.735 -11262.735 275.76408 275.76408 69532.358 69532.358 117.89165 117.89165 Loop time of 29.5133 on 1 procs for 1000 steps with 4000 atoms Performance: 2.927 ns/day, 8.198 hours/ns, 33.883 timesteps/s 37.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.768 | 28.768 | 28.768 | 0.0 | 97.47 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098753 | 0.098753 | 0.098753 | 0.0 | 0.33 Output | 4.8876e-05 | 4.8876e-05 | 4.8876e-05 | 0.0 | 0.00 Modify | 0.58595 | 0.58595 | 0.58595 | 0.0 | 1.99 Other | | 0.06066 | | | 0.21 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5861 ave 5861 max 5861 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535544 ave 535544 max 535544 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535544 Ave neighs/atom = 133.886 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.717626951091, Press = 1.3658915370403 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -11120.189 -11120.189 -11262.735 -11262.735 275.76408 275.76408 69532.358 69532.358 117.89165 117.89165 19000 -11118.812 -11118.812 -11260.664 -11260.664 274.42318 274.42318 69545.714 69545.714 162.58243 162.58243 Loop time of 28.9626 on 1 procs for 1000 steps with 4000 atoms Performance: 2.983 ns/day, 8.045 hours/ns, 34.527 timesteps/s 38.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.331 | 28.331 | 28.331 | 0.0 | 97.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038617 | 0.038617 | 0.038617 | 0.0 | 0.13 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.53296 | 0.53296 | 0.53296 | 0.0 | 1.84 Other | | 0.06046 | | | 0.21 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5868 ave 5868 max 5868 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535470 ave 535470 max 535470 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535470 Ave neighs/atom = 133.868 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.79625098547, Press = 0.0574085213080161 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -11118.812 -11118.812 -11260.664 -11260.664 274.42318 274.42318 69545.714 69545.714 162.58243 162.58243 20000 -11124.008 -11124.008 -11263.044 -11263.044 268.9747 268.9747 69552.405 69552.405 -256.98798 -256.98798 Loop time of 28.6328 on 1 procs for 1000 steps with 4000 atoms Performance: 3.018 ns/day, 7.954 hours/ns, 34.925 timesteps/s 38.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.033 | 28.033 | 28.033 | 0.0 | 97.90 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098348 | 0.098348 | 0.098348 | 0.0 | 0.34 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.48205 | 0.48205 | 0.48205 | 0.0 | 1.68 Other | | 0.01991 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5852 ave 5852 max 5852 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535304 ave 535304 max 535304 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535304 Ave neighs/atom = 133.826 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.867076607817, Press = 2.39223904474766 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -11124.008 -11124.008 -11263.044 -11263.044 268.9747 268.9747 69552.405 69552.405 -256.98798 -256.98798 21000 -11120.001 -11120.001 -11262.696 -11262.696 276.05308 276.05308 69572.953 69572.953 -492.21421 -492.21421 Loop time of 27.9094 on 1 procs for 1000 steps with 4000 atoms Performance: 3.096 ns/day, 7.753 hours/ns, 35.830 timesteps/s 39.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.44 | 27.44 | 27.44 | 0.0 | 98.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058004 | 0.058004 | 0.058004 | 0.0 | 0.21 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.37135 | 0.37135 | 0.37135 | 0.0 | 1.33 Other | | 0.0398 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5850 ave 5850 max 5850 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535470 ave 535470 max 535470 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535470 Ave neighs/atom = 133.868 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.925891347842, Press = 1.21980820754967 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -11120.001 -11120.001 -11262.696 -11262.696 276.05308 276.05308 69572.953 69572.953 -492.21421 -492.21421 22000 -11126.433 -11126.433 -11268.262 -11268.262 274.37831 274.37831 69523.915 69523.915 -424.81353 -424.81353 Loop time of 28.9918 on 1 procs for 1000 steps with 4000 atoms Performance: 2.980 ns/day, 8.053 hours/ns, 34.492 timesteps/s 37.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.42 | 28.42 | 28.42 | 0.0 | 98.03 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038154 | 0.038154 | 0.038154 | 0.0 | 0.13 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.44294 | 0.44294 | 0.44294 | 0.0 | 1.53 Other | | 0.09036 | | | 0.31 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5842 ave 5842 max 5842 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535374 ave 535374 max 535374 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535374 Ave neighs/atom = 133.844 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.928278078297, Press = 1.63574569967794 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -11126.433 -11126.433 -11268.262 -11268.262 274.37831 274.37831 69523.915 69523.915 -424.81353 -424.81353 23000 -11126.284 -11126.284 -11264.46 -11264.46 267.31084 267.31084 69541.471 69541.471 -320.15483 -320.15483 Loop time of 29.6929 on 1 procs for 1000 steps with 4000 atoms Performance: 2.910 ns/day, 8.248 hours/ns, 33.678 timesteps/s 37.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.024 | 29.024 | 29.024 | 0.0 | 97.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13865 | 0.13865 | 0.13865 | 0.0 | 0.47 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.43001 | 0.43001 | 0.43001 | 0.0 | 1.45 Other | | 0.1003 | | | 0.34 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5848 ave 5848 max 5848 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535626 ave 535626 max 535626 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535626 Ave neighs/atom = 133.906 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.896661748713, Press = 0.067509597323678 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -11126.284 -11126.284 -11264.46 -11264.46 267.31084 267.31084 69541.471 69541.471 -320.15483 -320.15483 24000 -11121.426 -11121.426 -11260.74 -11260.74 269.5122 269.5122 69497.108 69497.108 923.38065 923.38065 Loop time of 27.4591 on 1 procs for 1000 steps with 4000 atoms Performance: 3.147 ns/day, 7.628 hours/ns, 36.418 timesteps/s 39.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.852 | 26.852 | 26.852 | 0.0 | 97.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11541 | 0.11541 | 0.11541 | 0.0 | 0.42 Output | 3.7909e-05 | 3.7909e-05 | 3.7909e-05 | 0.0 | 0.00 Modify | 0.47116 | 0.47116 | 0.47116 | 0.0 | 1.72 Other | | 0.02042 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5851 ave 5851 max 5851 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535560 ave 535560 max 535560 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535560 Ave neighs/atom = 133.89 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.870236526988, Press = -0.101337410544291 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -11121.426 -11121.426 -11260.74 -11260.74 269.5122 269.5122 69497.108 69497.108 923.38065 923.38065 25000 -11120.702 -11120.702 -11265.051 -11265.051 279.253 279.253 69539.262 69539.262 -166.92825 -166.92825 Loop time of 27.8564 on 1 procs for 1000 steps with 4000 atoms Performance: 3.102 ns/day, 7.738 hours/ns, 35.898 timesteps/s 39.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.344 | 27.344 | 27.344 | 0.0 | 98.16 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058282 | 0.058282 | 0.058282 | 0.0 | 0.21 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.38352 | 0.38352 | 0.38352 | 0.0 | 1.38 Other | | 0.07034 | | | 0.25 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5852 ave 5852 max 5852 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535460 ave 535460 max 535460 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535460 Ave neighs/atom = 133.865 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.903952877714, Press = 0.0486451117924055 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -11120.702 -11120.702 -11265.051 -11265.051 279.253 279.253 69539.262 69539.262 -166.92825 -166.92825 26000 -11118.903 -11118.903 -11263.077 -11263.077 278.91355 278.91355 69496.251 69496.251 677.56249 677.56249 Loop time of 27.1173 on 1 procs for 1000 steps with 4000 atoms Performance: 3.186 ns/day, 7.533 hours/ns, 36.877 timesteps/s 40.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.557 | 26.557 | 26.557 | 0.0 | 97.93 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15833 | 0.15833 | 0.15833 | 0.0 | 0.58 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.36167 | 0.36167 | 0.36167 | 0.0 | 1.33 Other | | 0.03999 | | | 0.15 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5850 ave 5850 max 5850 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 535658 ave 535658 max 535658 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 535658 Ave neighs/atom = 133.915 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T273.15.out" else "print 'not_converged' file output/vol_T273.15.out" print '${V}' file output/vol_T273.15.out 69539.4717520626 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0