# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.089642539620402*${_u_distance} variable latticeconst_converted equal 4.089642539620402*1 lattice fcc ${latticeconst_converted} lattice fcc 4.0896425396204 Lattice spacing in x,y,z = 4.08964 4.08964 4.08964 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (40.8964 40.8964 40.8964) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000336885 secs variable mass_converted equal 107.8682*${_u_mass} variable mass_converted equal 107.8682*1 # specify which KIM Model to use pair_style kim EAM_Dynamo_ZhouWadleyJohnson_2001NISTretabulation_Ag__MO_505250810900_000 pair_coeff * * Ag mass 1 ${mass_converted} mass 1 107.8682 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 68399.9916688615 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 68399.9916688615/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 68399.9916688615/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 68399.9916688615/(1*1*${_u_distance}) variable V0_metal equal 68399.9916688615/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 68399.9916688615*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 68399.9916688615 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 333.15*${_u_temperature} variable temp_converted equal 333.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 333.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "333.15 - 0.2" variable T_up equal "333.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8.46629 ghost atom cutoff = 8.46629 binsize = 4.23315, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8.46629 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -11227.789 -11227.789 -11399.998 -11399.998 333.15 333.15 68399.992 68399.992 2689.2136 2689.2136 1000 -11031.321 -11031.321 -11210.041 -11210.041 345.74612 345.74612 70111.641 70111.641 267.38548 267.38548 Loop time of 31.4052 on 1 procs for 1000 steps with 4000 atoms Performance: 2.751 ns/day, 8.724 hours/ns, 31.842 timesteps/s 35.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.639 | 30.639 | 30.639 | 0.0 | 97.56 Neigh | 0.056693 | 0.056693 | 0.056693 | 0.0 | 0.18 Comm | 0.11285 | 0.11285 | 0.11285 | 0.0 | 0.36 Output | 4.0054e-05 | 4.0054e-05 | 4.0054e-05 | 0.0 | 0.00 Modify | 0.49552 | 0.49552 | 0.49552 | 0.0 | 1.58 Other | | 0.1013 | | | 0.32 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8099 ave 8099 max 8099 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562262 ave 562262 max 562262 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562262 Ave neighs/atom = 140.565 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -11031.321 -11031.321 -11210.041 -11210.041 345.74612 345.74612 70111.641 70111.641 267.38548 267.38548 2000 -11054.825 -11054.825 -11223.584 -11223.584 326.47563 326.47563 69995.557 69995.557 193.10418 193.10418 Loop time of 32.0777 on 1 procs for 1000 steps with 4000 atoms Performance: 2.693 ns/day, 8.910 hours/ns, 31.174 timesteps/s 35.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.447 | 31.447 | 31.447 | 0.0 | 98.03 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11167 | 0.11167 | 0.11167 | 0.0 | 0.35 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.43805 | 0.43805 | 0.43805 | 0.0 | 1.37 Other | | 0.08119 | | | 0.25 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8098 ave 8098 max 8098 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562990 ave 562990 max 562990 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562990 Ave neighs/atom = 140.748 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -11054.825 -11054.825 -11223.584 -11223.584 326.47563 326.47563 69995.557 69995.557 193.10418 193.10418 3000 -11041.584 -11041.584 -11216.17 -11216.17 337.7485 337.7485 70103.708 70103.708 -387.41717 -387.41717 Loop time of 31.4461 on 1 procs for 1000 steps with 4000 atoms Performance: 2.748 ns/day, 8.735 hours/ns, 31.800 timesteps/s 36.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.821 | 30.821 | 30.821 | 0.0 | 98.01 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16282 | 0.16282 | 0.16282 | 0.0 | 0.52 Output | 4.3869e-05 | 4.3869e-05 | 4.3869e-05 | 0.0 | 0.00 Modify | 0.4004 | 0.4004 | 0.4004 | 0.0 | 1.27 Other | | 0.06172 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8136 ave 8136 max 8136 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562326 ave 562326 max 562326 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562326 Ave neighs/atom = 140.582 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -11041.584 -11041.584 -11216.17 -11216.17 337.7485 337.7485 70103.708 70103.708 -387.41717 -387.41717 4000 -11051.248 -11051.248 -11218.889 -11218.889 324.31168 324.31168 70050.802 70050.802 -75.742043 -75.742043 Loop time of 31.9825 on 1 procs for 1000 steps with 4000 atoms Performance: 2.701 ns/day, 8.884 hours/ns, 31.267 timesteps/s 36.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.371 | 31.371 | 31.371 | 0.0 | 98.09 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13198 | 0.13198 | 0.13198 | 0.0 | 0.41 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.3779 | 0.3779 | 0.3779 | 0.0 | 1.18 Other | | 0.1013 | | | 0.32 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8157 ave 8157 max 8157 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562340 ave 562340 max 562340 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562340 Ave neighs/atom = 140.585 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -11051.248 -11051.248 -11218.889 -11218.889 324.31168 324.31168 70050.802 70050.802 -75.742043 -75.742043 5000 -11043.909 -11043.909 -11218.671 -11218.671 338.08965 338.08965 70006.568 70006.568 631.29425 631.29425 Loop time of 31.0336 on 1 procs for 1000 steps with 4000 atoms Performance: 2.784 ns/day, 8.620 hours/ns, 32.223 timesteps/s 37.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.441 | 30.441 | 30.441 | 0.0 | 98.09 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.092183 | 0.092183 | 0.092183 | 0.0 | 0.30 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.43909 | 0.43909 | 0.43909 | 0.0 | 1.41 Other | | 0.0615 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8164 ave 8164 max 8164 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562204 ave 562204 max 562204 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562204 Ave neighs/atom = 140.551 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.677458059021, Press = -103.62505239392 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -11043.909 -11043.909 -11218.671 -11218.671 338.08965 338.08965 70006.568 70006.568 631.29425 631.29425 6000 -11048.223 -11048.223 -11220.709 -11220.709 333.68571 333.68571 70020.795 70020.795 192.79695 192.79695 Loop time of 30.2256 on 1 procs for 1000 steps with 4000 atoms Performance: 2.859 ns/day, 8.396 hours/ns, 33.085 timesteps/s 38.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.611 | 29.611 | 29.611 | 0.0 | 97.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.071742 | 0.071742 | 0.071742 | 0.0 | 0.24 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.48182 | 0.48182 | 0.48182 | 0.0 | 1.59 Other | | 0.06105 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8136 ave 8136 max 8136 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562662 ave 562662 max 562662 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562662 Ave neighs/atom = 140.666 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.729852074157, Press = 15.6007123807709 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -11048.223 -11048.223 -11220.709 -11220.709 333.68571 333.68571 70020.795 70020.795 192.79695 192.79695 7000 -11049.084 -11049.084 -11219.465 -11219.465 329.61314 329.61314 70165.495 70165.495 -1832.6487 -1832.6487 Loop time of 29.3684 on 1 procs for 1000 steps with 4000 atoms Performance: 2.942 ns/day, 8.158 hours/ns, 34.050 timesteps/s 39.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.752 | 28.752 | 28.752 | 0.0 | 97.90 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11194 | 0.11194 | 0.11194 | 0.0 | 0.38 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.42241 | 0.42241 | 0.42241 | 0.0 | 1.44 Other | | 0.08169 | | | 0.28 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8156 ave 8156 max 8156 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562206 ave 562206 max 562206 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562206 Ave neighs/atom = 140.552 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.096814557316, Press = 3.0226242749179 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -11049.084 -11049.084 -11219.465 -11219.465 329.61314 329.61314 70165.495 70165.495 -1832.6487 -1832.6487 8000 -11045.646 -11045.646 -11217.684 -11217.684 332.82 332.82 70074.346 70074.346 -207.48728 -207.48728 Loop time of 31.8649 on 1 procs for 1000 steps with 4000 atoms Performance: 2.711 ns/day, 8.851 hours/ns, 31.382 timesteps/s 35.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.27 | 31.27 | 31.27 | 0.0 | 98.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13155 | 0.13155 | 0.13155 | 0.0 | 0.41 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.40191 | 0.40191 | 0.40191 | 0.0 | 1.26 Other | | 0.06124 | | | 0.19 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8128 ave 8128 max 8128 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 561762 ave 561762 max 561762 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 561762 Ave neighs/atom = 140.44 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.322005969446, Press = -9.83589232076532 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -11045.646 -11045.646 -11217.684 -11217.684 332.82 332.82 70074.346 70074.346 -207.48728 -207.48728 9000 -11046.028 -11046.028 -11219.176 -11219.176 334.9666 334.9666 69998.325 69998.325 683.62606 683.62606 Loop time of 34.4603 on 1 procs for 1000 steps with 4000 atoms Performance: 2.507 ns/day, 9.572 hours/ns, 29.019 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.702 | 33.702 | 33.702 | 0.0 | 97.80 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15113 | 0.15113 | 0.15113 | 0.0 | 0.44 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.56608 | 0.56608 | 0.56608 | 0.0 | 1.64 Other | | 0.04073 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8144 ave 8144 max 8144 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562416 ave 562416 max 562416 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562416 Ave neighs/atom = 140.604 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.833275404808, Press = -2.48998390071478 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -11046.028 -11046.028 -11219.176 -11219.176 334.9666 334.9666 69998.325 69998.325 683.62606 683.62606 10000 -11049.796 -11049.796 -11220.397 -11220.397 330.03852 330.03852 69960.136 69960.136 1038.0572 1038.0572 Loop time of 34.7721 on 1 procs for 1000 steps with 4000 atoms Performance: 2.485 ns/day, 9.659 hours/ns, 28.759 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.957 | 33.957 | 33.957 | 0.0 | 97.66 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14208 | 0.14208 | 0.14208 | 0.0 | 0.41 Output | 5.3167e-05 | 5.3167e-05 | 5.3167e-05 | 0.0 | 0.00 Modify | 0.63171 | 0.63171 | 0.63171 | 0.0 | 1.82 Other | | 0.0412 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8163 ave 8163 max 8163 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562408 ave 562408 max 562408 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562408 Ave neighs/atom = 140.602 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.036381398534, Press = 6.05609753102558 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -11049.796 -11049.796 -11220.397 -11220.397 330.03852 330.03852 69960.136 69960.136 1038.0572 1038.0572 11000 -11046.305 -11046.305 -11220.765 -11220.765 337.50491 337.50491 70115.047 70115.047 -1078.6099 -1078.6099 Loop time of 34.5543 on 1 procs for 1000 steps with 4000 atoms Performance: 2.500 ns/day, 9.598 hours/ns, 28.940 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.987 | 33.987 | 33.987 | 0.0 | 98.36 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1734 | 0.1734 | 0.1734 | 0.0 | 0.50 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.36102 | 0.36102 | 0.36102 | 0.0 | 1.04 Other | | 0.03315 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8156 ave 8156 max 8156 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562552 ave 562552 max 562552 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562552 Ave neighs/atom = 140.638 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.125019330354, Press = 4.2968451031915 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -11046.305 -11046.305 -11220.765 -11220.765 337.50491 337.50491 70115.047 70115.047 -1078.6099 -1078.6099 12000 -11049.382 -11049.382 -11220.256 -11220.256 330.56694 330.56694 70003.613 70003.613 413.61775 413.61775 Loop time of 34.6055 on 1 procs for 1000 steps with 4000 atoms Performance: 2.497 ns/day, 9.613 hours/ns, 28.897 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.842 | 33.842 | 33.842 | 0.0 | 97.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23211 | 0.23211 | 0.23211 | 0.0 | 0.67 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.51011 | 0.51011 | 0.51011 | 0.0 | 1.47 Other | | 0.02105 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8129 ave 8129 max 8129 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562076 ave 562076 max 562076 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562076 Ave neighs/atom = 140.519 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.101139977274, Press = -2.91242293945171 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -11049.382 -11049.382 -11220.256 -11220.256 330.56694 330.56694 70003.613 70003.613 413.61775 413.61775 13000 -11050.225 -11050.225 -11220.854 -11220.854 330.0935 330.0935 69980.575 69980.575 682.87566 682.87566 Loop time of 34.6958 on 1 procs for 1000 steps with 4000 atoms Performance: 2.490 ns/day, 9.638 hours/ns, 28.822 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 34.009 | 34.009 | 34.009 | 0.0 | 98.02 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19302 | 0.19302 | 0.19302 | 0.0 | 0.56 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.45267 | 0.45267 | 0.45267 | 0.0 | 1.30 Other | | 0.04137 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8143 ave 8143 max 8143 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562344 ave 562344 max 562344 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562344 Ave neighs/atom = 140.586 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.123524252855, Press = 1.1968784453059 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -11050.225 -11050.225 -11220.854 -11220.854 330.0935 330.0935 69980.575 69980.575 682.87566 682.87566 14000 -11041.965 -11041.965 -11214.202 -11214.202 333.20263 333.20263 70110.535 70110.535 -307.05474 -307.05474 Loop time of 34.6855 on 1 procs for 1000 steps with 4000 atoms Performance: 2.491 ns/day, 9.635 hours/ns, 28.830 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.85 | 33.85 | 33.85 | 0.0 | 97.59 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23245 | 0.23245 | 0.23245 | 0.0 | 0.67 Output | 3.2187e-05 | 3.2187e-05 | 3.2187e-05 | 0.0 | 0.00 Modify | 0.52174 | 0.52174 | 0.52174 | 0.0 | 1.50 Other | | 0.08175 | | | 0.24 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8132 ave 8132 max 8132 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562442 ave 562442 max 562442 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562442 Ave neighs/atom = 140.611 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.308455898387, Press = -4.48417825631237 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -11041.965 -11041.965 -11214.202 -11214.202 333.20263 333.20263 70110.535 70110.535 -307.05474 -307.05474 15000 -11049.196 -11049.196 -11222.259 -11222.259 334.80085 334.80085 70016.597 70016.597 133.28297 133.28297 Loop time of 34.4422 on 1 procs for 1000 steps with 4000 atoms Performance: 2.509 ns/day, 9.567 hours/ns, 29.034 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.781 | 33.781 | 33.781 | 0.0 | 98.08 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.171 | 0.171 | 0.171 | 0.0 | 0.50 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.38909 | 0.38909 | 0.38909 | 0.0 | 1.13 Other | | 0.1007 | | | 0.29 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8144 ave 8144 max 8144 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562530 ave 562530 max 562530 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562530 Ave neighs/atom = 140.632 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.321369839395, Press = -0.471981825189277 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -11049.196 -11049.196 -11222.259 -11222.259 334.80085 334.80085 70016.597 70016.597 133.28297 133.28297 16000 -11044.556 -11044.556 -11219.087 -11219.087 337.64111 337.64111 70035.968 70035.968 173.49791 173.49791 Loop time of 34.8359 on 1 procs for 1000 steps with 4000 atoms Performance: 2.480 ns/day, 9.677 hours/ns, 28.706 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 34.147 | 34.147 | 34.147 | 0.0 | 98.02 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13231 | 0.13231 | 0.13231 | 0.0 | 0.38 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.51517 | 0.51517 | 0.51517 | 0.0 | 1.48 Other | | 0.04132 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8151 ave 8151 max 8151 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562450 ave 562450 max 562450 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562450 Ave neighs/atom = 140.613 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.330535952106, Press = 3.15067646137779 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -11044.556 -11044.556 -11219.087 -11219.087 337.64111 337.64111 70035.968 70035.968 173.49791 173.49791 17000 -11048.404 -11048.404 -11221.698 -11221.698 335.24906 335.24906 70081.06 70081.06 -775.69419 -775.69419 Loop time of 34.5625 on 1 procs for 1000 steps with 4000 atoms Performance: 2.500 ns/day, 9.601 hours/ns, 28.933 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.749 | 33.749 | 33.749 | 0.0 | 97.65 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15121 | 0.15121 | 0.15121 | 0.0 | 0.44 Output | 3.7909e-05 | 3.7909e-05 | 3.7909e-05 | 0.0 | 0.00 Modify | 0.52132 | 0.52132 | 0.52132 | 0.0 | 1.51 Other | | 0.141 | | | 0.41 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8157 ave 8157 max 8157 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562346 ave 562346 max 562346 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562346 Ave neighs/atom = 140.587 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.436679873442, Press = -2.12756364689852 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -11048.404 -11048.404 -11221.698 -11221.698 335.24906 335.24906 70081.06 70081.06 -775.69419 -775.69419 18000 -11048.8 -11048.8 -11222.895 -11222.895 336.80042 336.80042 69961.238 69961.238 927.56473 927.56473 Loop time of 34.4148 on 1 procs for 1000 steps with 4000 atoms Performance: 2.511 ns/day, 9.560 hours/ns, 29.057 timesteps/s 33.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.784 | 33.784 | 33.784 | 0.0 | 98.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15026 | 0.15026 | 0.15026 | 0.0 | 0.44 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.43969 | 0.43969 | 0.43969 | 0.0 | 1.28 Other | | 0.0403 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8148 ave 8148 max 8148 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562216 ave 562216 max 562216 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562216 Ave neighs/atom = 140.554 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.219192646772, Press = 2.70356754252348 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -11048.8 -11048.8 -11222.895 -11222.895 336.80042 336.80042 69961.238 69961.238 927.56473 927.56473 19000 -11045.272 -11045.272 -11217.914 -11217.914 333.98719 333.98719 70077.48 70077.48 -341.89683 -341.89683 Loop time of 34.537 on 1 procs for 1000 steps with 4000 atoms Performance: 2.502 ns/day, 9.594 hours/ns, 28.954 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.712 | 33.712 | 33.712 | 0.0 | 97.61 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17204 | 0.17204 | 0.17204 | 0.0 | 0.50 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.55158 | 0.55158 | 0.55158 | 0.0 | 1.60 Other | | 0.1012 | | | 0.29 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8145 ave 8145 max 8145 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562792 ave 562792 max 562792 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562792 Ave neighs/atom = 140.698 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.204108839854, Press = 2.20381480022661 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -11045.272 -11045.272 -11217.914 -11217.914 333.98719 333.98719 70077.48 70077.48 -341.89683 -341.89683 20000 -11050.809 -11050.809 -11219.335 -11219.335 326.026 326.026 70058.79 70058.79 -235.0516 -235.0516 Loop time of 34.4836 on 1 procs for 1000 steps with 4000 atoms Performance: 2.506 ns/day, 9.579 hours/ns, 28.999 timesteps/s 33.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.929 | 33.929 | 33.929 | 0.0 | 98.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15222 | 0.15222 | 0.15222 | 0.0 | 0.44 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.32092 | 0.32092 | 0.32092 | 0.0 | 0.93 Other | | 0.08104 | | | 0.24 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8144 ave 8144 max 8144 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562190 ave 562190 max 562190 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562190 Ave neighs/atom = 140.548 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.16639859662, Press = -1.17210029067049 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -11050.809 -11050.809 -11219.335 -11219.335 326.026 326.026 70058.79 70058.79 -235.0516 -235.0516 21000 -11049.357 -11049.357 -11222.385 -11222.385 334.73485 334.73485 69948.823 69948.823 1030.8199 1030.8199 Loop time of 34.7084 on 1 procs for 1000 steps with 4000 atoms Performance: 2.489 ns/day, 9.641 hours/ns, 28.811 timesteps/s 33.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.95 | 33.95 | 33.95 | 0.0 | 97.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15248 | 0.15248 | 0.15248 | 0.0 | 0.44 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.52485 | 0.52485 | 0.52485 | 0.0 | 1.51 Other | | 0.08115 | | | 0.23 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8111 ave 8111 max 8111 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562372 ave 562372 max 562372 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562372 Ave neighs/atom = 140.593 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T333.15.out" else "print 'not_converged' file output/vol_T333.15.out" print '${V}' file output/vol_T333.15.out 70048.1638331974 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0