# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.075408697128296*${_u_distance} variable latticeconst_converted equal 4.075408697128296*1 lattice fcc ${latticeconst_converted} lattice fcc 4.0754086971283 Lattice spacing in x,y,z = 4.07541 4.07541 4.07541 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (40.7541 40.7541 40.7541) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.00109911 secs variable mass_converted equal 107.8682*${_u_mass} variable mass_converted equal 107.8682*1 kim_interactions Ag #=== BEGIN kim_interactions ================================== pair_style kim Morse_Shifted_GirifalcoWeizer_1959MedCutoff_Ag__MO_861893969202_004 pair_coeff * * Ag #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 107.8682 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 67688.2839308043 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 67688.2839308043/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 67688.2839308043/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 67688.2839308043/(1*1*${_u_distance}) variable V0_metal equal 67688.2839308043/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 67688.2839308043*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 67688.2839308043 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10.667 ghost atom cutoff = 10.667 binsize = 5.33348, bins = 8 8 8 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10.667 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.673 | 8.673 | 8.673 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -11769.346 -11769.346 -11900.202 -11900.202 253.15 253.15 67688.284 67688.284 2064.8935 2064.8935 1000 -11628.353 -11628.353 -11764.406 -11764.406 263.20334 263.20334 68309.113 68309.113 1408.4527 1408.4527 Loop time of 48.0359 on 1 procs for 1000 steps with 4000 atoms Performance: 1.799 ns/day, 13.343 hours/ns, 20.818 timesteps/s 64.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.587 | 47.587 | 47.587 | 0.0 | 99.06 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11635 | 0.11635 | 0.11635 | 0.0 | 0.24 Output | 6.4135e-05 | 6.4135e-05 | 6.4135e-05 | 0.0 | 0.00 Modify | 0.28316 | 0.28316 | 0.28316 | 0.0 | 0.59 Other | | 0.0498 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.28e+06 ave 1.28e+06 max 1.28e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1280000 Ave neighs/atom = 320 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -11628.353 -11628.353 -11764.406 -11764.406 263.20334 263.20334 68309.113 68309.113 1408.4527 1408.4527 2000 -11639.855 -11639.855 -11773.237 -11773.237 258.036 258.036 68316.484 68316.484 790.40928 790.40928 Loop time of 53.0502 on 1 procs for 1000 steps with 4000 atoms Performance: 1.629 ns/day, 14.736 hours/ns, 18.850 timesteps/s 60.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 52.376 | 52.376 | 52.376 | 0.0 | 98.73 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14685 | 0.14685 | 0.14685 | 0.0 | 0.28 Output | 5.4836e-05 | 5.4836e-05 | 5.4836e-05 | 0.0 | 0.00 Modify | 0.46638 | 0.46638 | 0.46638 | 0.0 | 0.88 Other | | 0.0611 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27866e+06 ave 1.27866e+06 max 1.27866e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278664 Ave neighs/atom = 319.666 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -11639.855 -11639.855 -11773.237 -11773.237 258.036 258.036 68316.484 68316.484 790.40928 790.40928 3000 -11634.956 -11634.956 -11767.97 -11767.97 257.32549 257.32549 68327.268 68327.268 917.95931 917.95931 Loop time of 51.5378 on 1 procs for 1000 steps with 4000 atoms Performance: 1.676 ns/day, 14.316 hours/ns, 19.403 timesteps/s 60.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 51.024 | 51.024 | 51.024 | 0.0 | 99.00 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1364 | 0.1364 | 0.1364 | 0.0 | 0.26 Output | 6.1035e-05 | 6.1035e-05 | 6.1035e-05 | 0.0 | 0.00 Modify | 0.3473 | 0.3473 | 0.3473 | 0.0 | 0.67 Other | | 0.02984 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27902e+06 ave 1.27902e+06 max 1.27902e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1279020 Ave neighs/atom = 319.755 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -11634.956 -11634.956 -11767.97 -11767.97 257.32549 257.32549 68327.268 68327.268 917.95931 917.95931 4000 -11635.438 -11635.438 -11765.598 -11765.598 251.80391 251.80391 68350.651 68350.651 618.92049 618.92049 Loop time of 40.8226 on 1 procs for 1000 steps with 4000 atoms Performance: 2.116 ns/day, 11.340 hours/ns, 24.496 timesteps/s 78.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.375 | 40.375 | 40.375 | 0.0 | 98.90 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12545 | 0.12545 | 0.12545 | 0.0 | 0.31 Output | 5.5075e-05 | 5.5075e-05 | 5.5075e-05 | 0.0 | 0.00 Modify | 0.27928 | 0.27928 | 0.27928 | 0.0 | 0.68 Other | | 0.04302 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27858e+06 ave 1.27858e+06 max 1.27858e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278584 Ave neighs/atom = 319.646 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -11635.438 -11635.438 -11765.598 -11765.598 251.80391 251.80391 68350.651 68350.651 618.92049 618.92049 5000 -11638.753 -11638.753 -11768.145 -11768.145 250.31833 250.31833 68338.48 68338.48 681.62862 681.62862 Loop time of 38.7274 on 1 procs for 1000 steps with 4000 atoms Performance: 2.231 ns/day, 10.758 hours/ns, 25.821 timesteps/s 81.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.309 | 38.309 | 38.309 | 0.0 | 98.92 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12008 | 0.12008 | 0.12008 | 0.0 | 0.31 Output | 4.7207e-05 | 4.7207e-05 | 4.7207e-05 | 0.0 | 0.00 Modify | 0.2681 | 0.2681 | 0.2681 | 0.0 | 0.69 Other | | 0.02984 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27836e+06 ave 1.27836e+06 max 1.27836e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278360 Ave neighs/atom = 319.59 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.028876698473, Press = 72.3125955360554 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -11638.753 -11638.753 -11768.145 -11768.145 250.31833 250.31833 68338.48 68338.48 681.62862 681.62862 6000 -11635.076 -11635.076 -11766.911 -11766.911 255.04433 255.04433 68378.633 68378.633 206.48279 206.48279 Loop time of 40.4085 on 1 procs for 1000 steps with 4000 atoms Performance: 2.138 ns/day, 11.225 hours/ns, 24.747 timesteps/s 78.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.949 | 39.949 | 39.949 | 0.0 | 98.86 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10626 | 0.10626 | 0.10626 | 0.0 | 0.26 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.27927 | 0.27927 | 0.27927 | 0.0 | 0.69 Other | | 0.07445 | | | 0.18 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27849e+06 ave 1.27849e+06 max 1.27849e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278488 Ave neighs/atom = 319.622 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.576928582885, Press = 6.73695358884284 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -11635.076 -11635.076 -11766.911 -11766.911 255.04433 255.04433 68378.633 68378.633 206.48279 206.48279 7000 -11637.561 -11637.561 -11768.066 -11768.066 252.47139 252.47139 68373.364 68373.364 215.49099 215.49099 Loop time of 43.8495 on 1 procs for 1000 steps with 4000 atoms Performance: 1.970 ns/day, 12.180 hours/ns, 22.805 timesteps/s 73.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.266 | 43.266 | 43.266 | 0.0 | 98.67 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19198 | 0.19198 | 0.19198 | 0.0 | 0.44 Output | 4.7922e-05 | 4.7922e-05 | 4.7922e-05 | 0.0 | 0.00 Modify | 0.36129 | 0.36129 | 0.36129 | 0.0 | 0.82 Other | | 0.03026 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27868e+06 ave 1.27868e+06 max 1.27868e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278680 Ave neighs/atom = 319.67 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.021693083381, Press = 6.28723671939523 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -11637.561 -11637.561 -11768.066 -11768.066 252.47139 252.47139 68373.364 68373.364 215.49099 215.49099 8000 -11633.464 -11633.464 -11767.853 -11767.853 259.98495 259.98495 68399.138 68399.138 -98.377857 -98.377857 Loop time of 44.647 on 1 procs for 1000 steps with 4000 atoms Performance: 1.935 ns/day, 12.402 hours/ns, 22.398 timesteps/s 71.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.14 | 44.14 | 44.14 | 0.0 | 98.87 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10714 | 0.10714 | 0.10714 | 0.0 | 0.24 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.35693 | 0.35693 | 0.35693 | 0.0 | 0.80 Other | | 0.04259 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27856e+06 ave 1.27856e+06 max 1.27856e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278556 Ave neighs/atom = 319.639 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.068545688668, Press = 5.6188452710111 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -11633.464 -11633.464 -11767.853 -11767.853 259.98495 259.98495 68399.138 68399.138 -98.377857 -98.377857 9000 -11638.388 -11638.388 -11767.07 -11767.07 248.94324 248.94324 68410.416 68410.416 -312.79339 -312.79339 Loop time of 44.328 on 1 procs for 1000 steps with 4000 atoms Performance: 1.949 ns/day, 12.313 hours/ns, 22.559 timesteps/s 70.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.811 | 43.811 | 43.811 | 0.0 | 98.83 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12521 | 0.12521 | 0.12521 | 0.0 | 0.28 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.34939 | 0.34939 | 0.34939 | 0.0 | 0.79 Other | | 0.04245 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27849e+06 ave 1.27849e+06 max 1.27849e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278486 Ave neighs/atom = 319.622 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.232476910799, Press = 9.15740498550149 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -11638.388 -11638.388 -11767.07 -11767.07 248.94324 248.94324 68410.416 68410.416 -312.79339 -312.79339 10000 -11637.342 -11637.342 -11768.2 -11768.2 253.1523 253.1523 68430.4 68430.4 -617.2905 -617.2905 Loop time of 43.5932 on 1 procs for 1000 steps with 4000 atoms Performance: 1.982 ns/day, 12.109 hours/ns, 22.939 timesteps/s 73.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.064 | 43.064 | 43.064 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11948 | 0.11948 | 0.11948 | 0.0 | 0.27 Output | 5.7936e-05 | 5.7936e-05 | 5.7936e-05 | 0.0 | 0.00 Modify | 0.3489 | 0.3489 | 0.3489 | 0.0 | 0.80 Other | | 0.06108 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27852e+06 ave 1.27852e+06 max 1.27852e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278524 Ave neighs/atom = 319.631 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.473841185204, Press = 4.02001900254399 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -11637.342 -11637.342 -11768.2 -11768.2 253.1523 253.1523 68430.4 68430.4 -617.2905 -617.2905 11000 -11637.725 -11637.725 -11767.337 -11767.337 250.74443 250.74443 68428.957 68428.957 -579.65931 -579.65931 Loop time of 36.8992 on 1 procs for 1000 steps with 4000 atoms Performance: 2.342 ns/day, 10.250 hours/ns, 27.101 timesteps/s 84.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 36.516 | 36.516 | 36.516 | 0.0 | 98.96 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.093689 | 0.093689 | 0.093689 | 0.0 | 0.25 Output | 3.8147e-05 | 3.8147e-05 | 3.8147e-05 | 0.0 | 0.00 Modify | 0.24722 | 0.24722 | 0.24722 | 0.0 | 0.67 Other | | 0.04249 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27863e+06 ave 1.27863e+06 max 1.27863e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278630 Ave neighs/atom = 319.658 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.183488123203, Press = 2.11514447138714 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -11637.725 -11637.725 -11767.337 -11767.337 250.74443 250.74443 68428.957 68428.957 -579.65931 -579.65931 12000 -11637.319 -11637.319 -11765.53 -11765.53 248.03433 248.03433 68406.487 68406.487 -173.28352 -173.28352 Loop time of 48.2779 on 1 procs for 1000 steps with 4000 atoms Performance: 1.790 ns/day, 13.411 hours/ns, 20.713 timesteps/s 64.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.815 | 47.815 | 47.815 | 0.0 | 99.04 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13257 | 0.13257 | 0.13257 | 0.0 | 0.27 Output | 4.8876e-05 | 4.8876e-05 | 4.8876e-05 | 0.0 | 0.00 Modify | 0.30073 | 0.30073 | 0.30073 | 0.0 | 0.62 Other | | 0.02947 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27845e+06 ave 1.27845e+06 max 1.27845e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278448 Ave neighs/atom = 319.612 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.200066275036, Press = 0.232918880455582 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -11637.319 -11637.319 -11765.53 -11765.53 248.03433 248.03433 68406.487 68406.487 -173.28352 -173.28352 13000 -11637.284 -11637.284 -11767.195 -11767.195 251.32122 251.32122 68405.484 68405.484 -222.13287 -222.13287 Loop time of 40.1803 on 1 procs for 1000 steps with 4000 atoms Performance: 2.150 ns/day, 11.161 hours/ns, 24.888 timesteps/s 79.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.756 | 39.756 | 39.756 | 0.0 | 98.94 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10566 | 0.10566 | 0.10566 | 0.0 | 0.26 Output | 4.8876e-05 | 4.8876e-05 | 4.8876e-05 | 0.0 | 0.00 Modify | 0.27547 | 0.27547 | 0.27547 | 0.0 | 0.69 Other | | 0.04277 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27847e+06 ave 1.27847e+06 max 1.27847e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278470 Ave neighs/atom = 319.618 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.258408950887, Press = 0.426362610810971 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -11637.284 -11637.284 -11767.195 -11767.195 251.32122 251.32122 68405.484 68405.484 -222.13287 -222.13287 14000 -11633.632 -11633.632 -11765.064 -11765.064 254.26531 254.26531 68439.622 68439.622 -582.26976 -582.26976 Loop time of 42.1521 on 1 procs for 1000 steps with 4000 atoms Performance: 2.050 ns/day, 11.709 hours/ns, 23.724 timesteps/s 74.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.674 | 41.674 | 41.674 | 0.0 | 98.86 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13396 | 0.13396 | 0.13396 | 0.0 | 0.32 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.31497 | 0.31497 | 0.31497 | 0.0 | 0.75 Other | | 0.02953 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27853e+06 ave 1.27853e+06 max 1.27853e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278528 Ave neighs/atom = 319.632 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.220195453406, Press = 0.411434326385023 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -11633.632 -11633.632 -11765.064 -11765.064 254.26531 254.26531 68439.622 68439.622 -582.26976 -582.26976 15000 -11636.137 -11636.137 -11767.402 -11767.402 253.94075 253.94075 68426.862 68426.862 -542.53987 -542.53987 Loop time of 57.3068 on 1 procs for 1000 steps with 4000 atoms Performance: 1.508 ns/day, 15.919 hours/ns, 17.450 timesteps/s 55.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 56.654 | 56.654 | 56.654 | 0.0 | 98.86 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15837 | 0.15837 | 0.15837 | 0.0 | 0.28 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.43929 | 0.43929 | 0.43929 | 0.0 | 0.77 Other | | 0.05493 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27837e+06 ave 1.27837e+06 max 1.27837e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278372 Ave neighs/atom = 319.593 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.421720336575, Press = -0.337160570896406 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -11636.137 -11636.137 -11767.402 -11767.402 253.94075 253.94075 68426.862 68426.862 -542.53987 -542.53987 16000 -11638.364 -11638.364 -11769.211 -11769.211 253.13266 253.13266 68445.656 68445.656 -912.69967 -912.69967 Loop time of 47.7843 on 1 procs for 1000 steps with 4000 atoms Performance: 1.808 ns/day, 13.273 hours/ns, 20.927 timesteps/s 65.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.253 | 47.253 | 47.253 | 0.0 | 98.89 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11258 | 0.11258 | 0.11258 | 0.0 | 0.24 Output | 4.7922e-05 | 4.7922e-05 | 4.7922e-05 | 0.0 | 0.00 Modify | 0.38866 | 0.38866 | 0.38866 | 0.0 | 0.81 Other | | 0.02974 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27838e+06 ave 1.27838e+06 max 1.27838e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278376 Ave neighs/atom = 319.594 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.284967759129, Press = -0.384207114011589 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -11638.364 -11638.364 -11769.211 -11769.211 253.13266 253.13266 68445.656 68445.656 -912.69967 -912.69967 17000 -11632.21 -11632.21 -11763.85 -11763.85 254.66784 254.66784 68483.174 68483.174 -1146.2423 -1146.2423 Loop time of 39.7371 on 1 procs for 1000 steps with 4000 atoms Performance: 2.174 ns/day, 11.038 hours/ns, 25.165 timesteps/s 79.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.239 | 39.239 | 39.239 | 0.0 | 98.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11882 | 0.11882 | 0.11882 | 0.0 | 0.30 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.33628 | 0.33628 | 0.33628 | 0.0 | 0.85 Other | | 0.04248 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27878e+06 ave 1.27878e+06 max 1.27878e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278776 Ave neighs/atom = 319.694 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.388410986099, Press = -2.35042832818414 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -11632.21 -11632.21 -11763.85 -11763.85 254.66784 254.66784 68483.174 68483.174 -1146.2423 -1146.2423 18000 -11638.891 -11638.891 -11767.695 -11767.695 249.18056 249.18056 68434.92 68434.92 -680.97193 -680.97193 Loop time of 41.7011 on 1 procs for 1000 steps with 4000 atoms Performance: 2.072 ns/day, 11.584 hours/ns, 23.980 timesteps/s 74.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.223 | 41.223 | 41.223 | 0.0 | 98.85 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10634 | 0.10634 | 0.10634 | 0.0 | 0.26 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.32307 | 0.32307 | 0.32307 | 0.0 | 0.77 Other | | 0.04828 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27825e+06 ave 1.27825e+06 max 1.27825e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278252 Ave neighs/atom = 319.563 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.448952167036, Press = -1.72747296939175 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -11638.891 -11638.891 -11767.695 -11767.695 249.18056 249.18056 68434.92 68434.92 -680.97193 -680.97193 19000 -11636.278 -11636.278 -11767.714 -11767.714 254.27245 254.27245 68411.892 68411.892 -326.45942 -326.45942 Loop time of 44.8428 on 1 procs for 1000 steps with 4000 atoms Performance: 1.927 ns/day, 12.456 hours/ns, 22.300 timesteps/s 69.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.29 | 44.29 | 44.29 | 0.0 | 98.77 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10469 | 0.10469 | 0.10469 | 0.0 | 0.23 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.40038 | 0.40038 | 0.40038 | 0.0 | 0.89 Other | | 0.04771 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27843e+06 ave 1.27843e+06 max 1.27843e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278426 Ave neighs/atom = 319.606 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.43158027489, Press = -0.771670292513728 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -11636.278 -11636.278 -11767.714 -11767.714 254.27245 254.27245 68411.892 68411.892 -326.45942 -326.45942 20000 -11636.352 -11636.352 -11766.053 -11766.053 250.91566 250.91566 68430.682 68430.682 -527.10202 -527.10202 Loop time of 45.6248 on 1 procs for 1000 steps with 4000 atoms Performance: 1.894 ns/day, 12.674 hours/ns, 21.918 timesteps/s 68.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 45.149 | 45.149 | 45.149 | 0.0 | 98.96 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13132 | 0.13132 | 0.13132 | 0.0 | 0.29 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.31531 | 0.31531 | 0.31531 | 0.0 | 0.69 Other | | 0.02948 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27861e+06 ave 1.27861e+06 max 1.27861e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278612 Ave neighs/atom = 319.653 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.351214264332, Press = -1.41446200165611 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -11636.352 -11636.352 -11766.053 -11766.053 250.91566 250.91566 68430.682 68430.682 -527.10202 -527.10202 21000 -11635.205 -11635.205 -11768.177 -11768.177 257.24437 257.24437 68433.211 68433.211 -619.90683 -619.90683 Loop time of 44.8799 on 1 procs for 1000 steps with 4000 atoms Performance: 1.925 ns/day, 12.467 hours/ns, 22.282 timesteps/s 70.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.434 | 44.434 | 44.434 | 0.0 | 99.01 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10556 | 0.10556 | 0.10556 | 0.0 | 0.24 Output | 4.4823e-05 | 4.4823e-05 | 4.4823e-05 | 0.0 | 0.00 Modify | 0.31061 | 0.31061 | 0.31061 | 0.0 | 0.69 Other | | 0.02986 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27844e+06 ave 1.27844e+06 max 1.27844e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278444 Ave neighs/atom = 319.611 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.24218485284, Press = -1.7728186959534 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -11635.205 -11635.205 -11768.177 -11768.177 257.24437 257.24437 68433.211 68433.211 -619.90683 -619.90683 22000 -11634.918 -11634.918 -11765.037 -11765.037 251.72396 251.72396 68402.203 68402.203 -37.964049 -37.964049 Loop time of 47.3394 on 1 procs for 1000 steps with 4000 atoms Performance: 1.825 ns/day, 13.150 hours/ns, 21.124 timesteps/s 66.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.826 | 46.826 | 46.826 | 0.0 | 98.92 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10758 | 0.10758 | 0.10758 | 0.0 | 0.23 Output | 4.8876e-05 | 4.8876e-05 | 4.8876e-05 | 0.0 | 0.00 Modify | 0.37571 | 0.37571 | 0.37571 | 0.0 | 0.79 Other | | 0.02974 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27833e+06 ave 1.27833e+06 max 1.27833e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278328 Ave neighs/atom = 319.582 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.194142537426, Press = -2.13482237815373 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -11634.918 -11634.918 -11765.037 -11765.037 251.72396 251.72396 68402.203 68402.203 -37.964049 -37.964049 23000 -11638.865 -11638.865 -11768.351 -11768.351 250.4993 250.4993 68381.879 68381.879 32.39791 32.39791 Loop time of 38.8719 on 1 procs for 1000 steps with 4000 atoms Performance: 2.223 ns/day, 10.798 hours/ns, 25.726 timesteps/s 81.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.419 | 38.419 | 38.419 | 0.0 | 98.84 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13133 | 0.13133 | 0.13133 | 0.0 | 0.34 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.27872 | 0.27872 | 0.27872 | 0.0 | 0.72 Other | | 0.04249 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27859e+06 ave 1.27859e+06 max 1.27859e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278592 Ave neighs/atom = 319.648 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.195446445265, Press = -1.25394338668395 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -11638.865 -11638.865 -11768.351 -11768.351 250.4993 250.4993 68381.879 68381.879 32.39791 32.39791 24000 -11639.825 -11639.825 -11768.833 -11768.833 249.57501 249.57501 68380.394 68380.394 31.981367 31.981367 Loop time of 38.0053 on 1 procs for 1000 steps with 4000 atoms Performance: 2.273 ns/day, 10.557 hours/ns, 26.312 timesteps/s 83.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.568 | 37.568 | 37.568 | 0.0 | 98.85 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13423 | 0.13423 | 0.13423 | 0.0 | 0.35 Output | 6.6996e-05 | 6.6996e-05 | 6.6996e-05 | 0.0 | 0.00 Modify | 0.25882 | 0.25882 | 0.25882 | 0.0 | 0.68 Other | | 0.04397 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27869e+06 ave 1.27869e+06 max 1.27869e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278686 Ave neighs/atom = 319.671 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.152295596993, Press = -0.719475081048039 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -11639.825 -11639.825 -11768.833 -11768.833 249.57501 249.57501 68380.394 68380.394 31.981367 31.981367 25000 -11637.712 -11637.712 -11769.892 -11769.892 255.71083 255.71083 68396.403 68396.403 -194.41358 -194.41358 Loop time of 41.6711 on 1 procs for 1000 steps with 4000 atoms Performance: 2.073 ns/day, 11.575 hours/ns, 23.997 timesteps/s 75.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.24 | 41.24 | 41.24 | 0.0 | 98.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11855 | 0.11855 | 0.11855 | 0.0 | 0.28 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.28255 | 0.28255 | 0.28255 | 0.0 | 0.68 Other | | 0.02967 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27841e+06 ave 1.27841e+06 max 1.27841e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278412 Ave neighs/atom = 319.603 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.124074951936, Press = -0.798519582356037 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.675 | 8.675 | 8.675 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -11637.712 -11637.712 -11769.892 -11769.892 255.71083 255.71083 68396.403 68396.403 -194.41358 -194.41358 26000 -11633.867 -11633.867 -11767.915 -11767.915 259.3242 259.3242 68419.348 68419.348 -391.22473 -391.22473 Loop time of 41.764 on 1 procs for 1000 steps with 4000 atoms Performance: 2.069 ns/day, 11.601 hours/ns, 23.944 timesteps/s 74.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.202 | 41.202 | 41.202 | 0.0 | 98.65 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1187 | 0.1187 | 0.1187 | 0.0 | 0.28 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.38802 | 0.38802 | 0.38802 | 0.0 | 0.93 Other | | 0.05527 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.27883e+06 ave 1.27883e+06 max 1.27883e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1278828 Ave neighs/atom = 319.707 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 68389.87760175 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0