# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.08964262008667*${_u_distance} variable latticeconst_converted equal 4.08964262008667*1 lattice fcc ${latticeconst_converted} lattice fcc 4.08964262008667 Lattice spacing in x,y,z = 4.08964 4.08964 4.08964 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (40.8964 40.8964 40.8964) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.0204999 secs variable mass_converted equal 107.8682*${_u_mass} variable mass_converted equal 107.8682*1 # specify which KIM Model to use pair_style kim EAM_Dynamo_ZhouJohnsonWadley_2004_Ag__MO_947112899505_005 pair_coeff * * Ag mass 1 ${mass_converted} mass 1 107.8682 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 68399.9957062992 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 68399.9957062992/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 68399.9957062992/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 68399.9957062992/(1*1*${_u_distance}) variable V0_metal equal 68399.9957062992/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 68399.9957062992*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 68399.9957062992 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8.46629 ghost atom cutoff = 8.46629 binsize = 4.23315, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8.46629 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -11238.127 -11238.127 -11399.998 -11399.998 313.15 313.15 68399.996 68399.996 2527.7436 2527.7436 1000 -11054.022 -11054.022 -11221.917 -11221.917 324.80321 324.80321 70051.813 70051.813 -376.13231 -376.13231 Loop time of 31.0217 on 1 procs for 1000 steps with 4000 atoms Performance: 2.785 ns/day, 8.617 hours/ns, 32.235 timesteps/s 36.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.332 | 30.332 | 30.332 | 0.0 | 97.78 Neigh | 0.058757 | 0.058757 | 0.058757 | 0.0 | 0.19 Comm | 0.17143 | 0.17143 | 0.17143 | 0.0 | 0.55 Output | 5.1022e-05 | 5.1022e-05 | 5.1022e-05 | 0.0 | 0.00 Modify | 0.43876 | 0.43876 | 0.43876 | 0.0 | 1.41 Other | | 0.02118 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8131 ave 8131 max 8131 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562274 ave 562274 max 562274 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562274 Ave neighs/atom = 140.569 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -11054.022 -11054.022 -11221.917 -11221.917 324.80321 324.80321 70051.813 70051.813 -376.13231 -376.13231 2000 -11076.031 -11076.031 -11234.58 -11234.58 306.72317 306.72317 69910.236 69910.236 26.610952 26.610952 Loop time of 30.9275 on 1 procs for 1000 steps with 4000 atoms Performance: 2.794 ns/day, 8.591 hours/ns, 32.334 timesteps/s 37.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.257 | 30.257 | 30.257 | 0.0 | 97.83 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15224 | 0.15224 | 0.15224 | 0.0 | 0.49 Output | 3.8862e-05 | 3.8862e-05 | 3.8862e-05 | 0.0 | 0.00 Modify | 0.43668 | 0.43668 | 0.43668 | 0.0 | 1.41 Other | | 0.08168 | | | 0.26 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8124 ave 8124 max 8124 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562690 ave 562690 max 562690 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562690 Ave neighs/atom = 140.673 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -11076.031 -11076.031 -11234.58 -11234.58 306.72317 306.72317 69910.236 69910.236 26.610952 26.610952 3000 -11063.184 -11063.184 -11227.01 -11227.01 316.93175 316.93175 69966.873 69966.873 176.94676 176.94676 Loop time of 31.3138 on 1 procs for 1000 steps with 4000 atoms Performance: 2.759 ns/day, 8.698 hours/ns, 31.935 timesteps/s 36.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.863 | 30.863 | 30.863 | 0.0 | 98.56 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15164 | 0.15164 | 0.15164 | 0.0 | 0.48 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.2583 | 0.2583 | 0.2583 | 0.0 | 0.82 Other | | 0.04079 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8142 ave 8142 max 8142 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562174 ave 562174 max 562174 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562174 Ave neighs/atom = 140.543 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -11063.184 -11063.184 -11227.01 -11227.01 316.93175 316.93175 69966.873 69966.873 176.94676 176.94676 4000 -11072.914 -11072.914 -11230.198 -11230.198 304.27569 304.27569 69907.492 69907.492 541.58626 541.58626 Loop time of 32.2109 on 1 procs for 1000 steps with 4000 atoms Performance: 2.682 ns/day, 8.947 hours/ns, 31.045 timesteps/s 36.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.479 | 31.479 | 31.479 | 0.0 | 97.73 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13191 | 0.13191 | 0.13191 | 0.0 | 0.41 Output | 3.7193e-05 | 3.7193e-05 | 3.7193e-05 | 0.0 | 0.00 Modify | 0.47876 | 0.47876 | 0.47876 | 0.0 | 1.49 Other | | 0.1214 | | | 0.38 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8171 ave 8171 max 8171 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562400 ave 562400 max 562400 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562400 Ave neighs/atom = 140.6 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -11072.914 -11072.914 -11230.198 -11230.198 304.27569 304.27569 69907.492 69907.492 541.58626 541.58626 5000 -11065.292 -11065.292 -11228.469 -11228.469 315.67662 315.67662 69944.809 69944.809 244.58116 244.58116 Loop time of 30.5083 on 1 procs for 1000 steps with 4000 atoms Performance: 2.832 ns/day, 8.475 hours/ns, 32.778 timesteps/s 38.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.95 | 29.95 | 29.95 | 0.0 | 98.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.091443 | 0.091443 | 0.091443 | 0.0 | 0.30 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.40577 | 0.40577 | 0.40577 | 0.0 | 1.33 Other | | 0.06095 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8183 ave 8183 max 8183 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562270 ave 562270 max 562270 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562270 Ave neighs/atom = 140.567 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 314.904681833529, Press = 224.26184913119 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -11065.292 -11065.292 -11228.469 -11228.469 315.67662 315.67662 69944.809 69944.809 244.58116 244.58116 6000 -11070.722 -11070.722 -11232.429 -11232.429 312.83269 312.83269 69950.488 69950.488 -324.3712 -324.3712 Loop time of 30.9223 on 1 procs for 1000 steps with 4000 atoms Performance: 2.794 ns/day, 8.590 hours/ns, 32.339 timesteps/s 37.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.175 | 30.175 | 30.175 | 0.0 | 97.58 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1338 | 0.1338 | 0.1338 | 0.0 | 0.43 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.53247 | 0.53247 | 0.53247 | 0.0 | 1.72 Other | | 0.08128 | | | 0.26 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8149 ave 8149 max 8149 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562366 ave 562366 max 562366 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562366 Ave neighs/atom = 140.591 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.771466243098, Press = 21.2439493900357 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -11070.722 -11070.722 -11232.429 -11232.429 312.83269 312.83269 69950.488 69950.488 -324.3712 -324.3712 7000 -11068.855 -11068.855 -11230.973 -11230.973 313.62734 313.62734 70027.183 70027.183 -1219.5757 -1219.5757 Loop time of 30.4901 on 1 procs for 1000 steps with 4000 atoms Performance: 2.834 ns/day, 8.469 hours/ns, 32.798 timesteps/s 37.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.754 | 29.754 | 29.754 | 0.0 | 97.59 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22203 | 0.22203 | 0.22203 | 0.0 | 0.73 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.44257 | 0.44257 | 0.44257 | 0.0 | 1.45 Other | | 0.07135 | | | 0.23 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8162 ave 8162 max 8162 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 561882 ave 561882 max 561882 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 561882 Ave neighs/atom = 140.47 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.089479782604, Press = -5.64102605097305 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -11068.855 -11068.855 -11230.973 -11230.973 313.62734 313.62734 70027.183 70027.183 -1219.5757 -1219.5757 8000 -11068.407 -11068.407 -11231.649 -11231.649 315.80263 315.80263 69956.03 69956.03 -204.9852 -204.9852 Loop time of 30.4758 on 1 procs for 1000 steps with 4000 atoms Performance: 2.835 ns/day, 8.466 hours/ns, 32.813 timesteps/s 38.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.908 | 29.908 | 29.908 | 0.0 | 98.14 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.072277 | 0.072277 | 0.072277 | 0.0 | 0.24 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.43426 | 0.43426 | 0.43426 | 0.0 | 1.42 Other | | 0.06125 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8151 ave 8151 max 8151 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562026 ave 562026 max 562026 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562026 Ave neighs/atom = 140.506 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.332618827944, Press = 5.74634613345058 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -11068.407 -11068.407 -11231.649 -11231.649 315.80263 315.80263 69956.03 69956.03 -204.9852 -204.9852 9000 -11064.711 -11064.711 -11227.347 -11227.347 314.63077 314.63077 69934.871 69934.871 519.82132 519.82132 Loop time of 30.4381 on 1 procs for 1000 steps with 4000 atoms Performance: 2.839 ns/day, 8.455 hours/ns, 32.854 timesteps/s 38.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.794 | 29.794 | 29.794 | 0.0 | 97.88 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.091338 | 0.091338 | 0.091338 | 0.0 | 0.30 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.53205 | 0.53205 | 0.53205 | 0.0 | 1.75 Other | | 0.02082 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8162 ave 8162 max 8162 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562152 ave 562152 max 562152 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562152 Ave neighs/atom = 140.538 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.169480499118, Press = -0.35319436551063 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -11064.711 -11064.711 -11227.347 -11227.347 314.63077 314.63077 69934.871 69934.871 519.82132 519.82132 10000 -11066.895 -11066.895 -11231.047 -11231.047 317.56298 317.56298 69982.402 69982.402 -548.04769 -548.04769 Loop time of 30.7651 on 1 procs for 1000 steps with 4000 atoms Performance: 2.808 ns/day, 8.546 hours/ns, 32.504 timesteps/s 37.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.219 | 30.219 | 30.219 | 0.0 | 98.23 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11178 | 0.11178 | 0.11178 | 0.0 | 0.36 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.37269 | 0.37269 | 0.37269 | 0.0 | 1.21 Other | | 0.06144 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8174 ave 8174 max 8174 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562322 ave 562322 max 562322 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562322 Ave neighs/atom = 140.581 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.427421933154, Press = 9.58821890433007 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -11066.895 -11066.895 -11231.047 -11231.047 317.56298 317.56298 69982.402 69982.402 -548.04769 -548.04769 11000 -11069.64 -11069.64 -11230.99 -11230.99 312.14379 312.14379 69868.031 69868.031 1031.5977 1031.5977 Loop time of 29.8326 on 1 procs for 1000 steps with 4000 atoms Performance: 2.896 ns/day, 8.287 hours/ns, 33.520 timesteps/s 38.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.207 | 29.207 | 29.207 | 0.0 | 97.90 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.091199 | 0.091199 | 0.091199 | 0.0 | 0.31 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.44258 | 0.44258 | 0.44258 | 0.0 | 1.48 Other | | 0.09137 | | | 0.31 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8156 ave 8156 max 8156 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562054 ave 562054 max 562054 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562054 Ave neighs/atom = 140.513 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.389662508107, Press = -2.72182400341106 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -11069.64 -11069.64 -11230.99 -11230.99 312.14379 312.14379 69868.031 69868.031 1031.5977 1031.5977 12000 -11065.388 -11065.388 -11230.25 -11230.25 318.93622 318.93622 69992.867 69992.867 -577.22446 -577.22446 Loop time of 30.0423 on 1 procs for 1000 steps with 4000 atoms Performance: 2.876 ns/day, 8.345 hours/ns, 33.286 timesteps/s 38.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.305 | 29.305 | 29.305 | 0.0 | 97.55 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2029 | 0.2029 | 0.2029 | 0.0 | 0.68 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.47286 | 0.47286 | 0.47286 | 0.0 | 1.57 Other | | 0.06103 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8164 ave 8164 max 8164 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562326 ave 562326 max 562326 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562326 Ave neighs/atom = 140.582 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.459282049714, Press = 1.89600023352668 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -11065.388 -11065.388 -11230.25 -11230.25 318.93622 318.93622 69992.867 69992.867 -577.22446 -577.22446 13000 -11070.477 -11070.477 -11232.558 -11232.558 313.55699 313.55699 69993.94 69993.94 -863.14218 -863.14218 Loop time of 30.2487 on 1 procs for 1000 steps with 4000 atoms Performance: 2.856 ns/day, 8.402 hours/ns, 33.059 timesteps/s 38.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.783 | 29.783 | 29.783 | 0.0 | 98.46 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1319 | 0.1319 | 0.1319 | 0.0 | 0.44 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.30226 | 0.30226 | 0.30226 | 0.0 | 1.00 Other | | 0.03101 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8166 ave 8166 max 8166 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 561972 ave 561972 max 561972 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 561972 Ave neighs/atom = 140.493 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.322227058948, Press = -0.773539075475716 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -11070.477 -11070.477 -11232.558 -11232.558 313.55699 313.55699 69993.94 69993.94 -863.14218 -863.14218 14000 -11074.832 -11074.832 -11233.124 -11233.124 306.2255 306.2255 69995.942 69995.942 -984.32149 -984.32149 Loop time of 30.204 on 1 procs for 1000 steps with 4000 atoms Performance: 2.861 ns/day, 8.390 hours/ns, 33.108 timesteps/s 38.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.649 | 29.649 | 29.649 | 0.0 | 98.16 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14035 | 0.14035 | 0.14035 | 0.0 | 0.46 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.35273 | 0.35273 | 0.35273 | 0.0 | 1.17 Other | | 0.06226 | | | 0.21 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8151 ave 8151 max 8151 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562166 ave 562166 max 562166 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562166 Ave neighs/atom = 140.542 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.266359865235, Press = 1.28789150604783 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -11074.832 -11074.832 -11233.124 -11233.124 306.2255 306.2255 69995.942 69995.942 -984.32149 -984.32149 15000 -11065.567 -11065.567 -11230.712 -11230.712 319.48505 319.48505 69954.941 69954.941 -27.865978 -27.865978 Loop time of 30.4033 on 1 procs for 1000 steps with 4000 atoms Performance: 2.842 ns/day, 8.445 hours/ns, 32.891 timesteps/s 38.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.798 | 29.798 | 29.798 | 0.0 | 98.01 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12195 | 0.12195 | 0.12195 | 0.0 | 0.40 Output | 4.0054e-05 | 4.0054e-05 | 4.0054e-05 | 0.0 | 0.00 Modify | 0.44265 | 0.44265 | 0.44265 | 0.0 | 1.46 Other | | 0.0411 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8162 ave 8162 max 8162 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562234 ave 562234 max 562234 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562234 Ave neighs/atom = 140.559 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.179965563541, Press = 2.10424728281695 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -11065.567 -11065.567 -11230.712 -11230.712 319.48505 319.48505 69954.941 69954.941 -27.865978 -27.865978 16000 -11072.464 -11072.464 -11229.762 -11229.762 304.3022 304.3022 69944.813 69944.813 36.119741 36.119741 Loop time of 29.9603 on 1 procs for 1000 steps with 4000 atoms Performance: 2.884 ns/day, 8.322 hours/ns, 33.378 timesteps/s 38.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.303 | 29.303 | 29.303 | 0.0 | 97.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17213 | 0.17213 | 0.17213 | 0.0 | 0.57 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.44377 | 0.44377 | 0.44377 | 0.0 | 1.48 Other | | 0.04126 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8154 ave 8154 max 8154 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562220 ave 562220 max 562220 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562220 Ave neighs/atom = 140.555 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.149520015613, Press = -1.70056104340549 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -11072.464 -11072.464 -11229.762 -11229.762 304.3022 304.3022 69944.813 69944.813 36.119741 36.119741 17000 -11064.216 -11064.216 -11230.015 -11230.015 320.75009 320.75009 70033.601 70033.601 -1149.5314 -1149.5314 Loop time of 30.1067 on 1 procs for 1000 steps with 4000 atoms Performance: 2.870 ns/day, 8.363 hours/ns, 33.215 timesteps/s 38.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.546 | 29.546 | 29.546 | 0.0 | 98.14 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17665 | 0.17665 | 0.17665 | 0.0 | 0.59 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.32288 | 0.32288 | 0.32288 | 0.0 | 1.07 Other | | 0.06133 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8148 ave 8148 max 8148 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562192 ave 562192 max 562192 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562192 Ave neighs/atom = 140.548 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.157898016529, Press = 2.52505570761243 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -11064.216 -11064.216 -11230.015 -11230.015 320.75009 320.75009 70033.601 70033.601 -1149.5314 -1149.5314 18000 -11066.072 -11066.072 -11230.035 -11230.035 317.19774 317.19774 69944.758 69944.758 136.71625 136.71625 Loop time of 30.2865 on 1 procs for 1000 steps with 4000 atoms Performance: 2.853 ns/day, 8.413 hours/ns, 33.018 timesteps/s 38.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.559 | 29.559 | 29.559 | 0.0 | 97.60 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15185 | 0.15185 | 0.15185 | 0.0 | 0.50 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.53396 | 0.53396 | 0.53396 | 0.0 | 1.76 Other | | 0.04114 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8141 ave 8141 max 8141 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 561772 ave 561772 max 561772 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 561772 Ave neighs/atom = 140.443 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.161225180069, Press = -0.585428524083485 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -11066.072 -11066.072 -11230.035 -11230.035 317.19774 317.19774 69944.758 69944.758 136.71625 136.71625 19000 -11072.308 -11072.308 -11230.855 -11230.855 306.71892 306.71892 69984.258 69984.258 -603.72939 -603.72939 Loop time of 29.4301 on 1 procs for 1000 steps with 4000 atoms Performance: 2.936 ns/day, 8.175 hours/ns, 33.979 timesteps/s 39.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.828 | 28.828 | 28.828 | 0.0 | 97.95 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1112 | 0.1112 | 0.1112 | 0.0 | 0.38 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.45028 | 0.45028 | 0.45028 | 0.0 | 1.53 Other | | 0.041 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8143 ave 8143 max 8143 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562282 ave 562282 max 562282 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562282 Ave neighs/atom = 140.571 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.144484873462, Press = 2.54056208690462 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -11072.308 -11072.308 -11230.855 -11230.855 306.71892 306.71892 69984.258 69984.258 -603.72939 -603.72939 20000 -11069.427 -11069.427 -11230.156 -11230.156 310.94135 310.94135 69923.247 69923.247 347.64475 347.64475 Loop time of 30.2943 on 1 procs for 1000 steps with 4000 atoms Performance: 2.852 ns/day, 8.415 hours/ns, 33.010 timesteps/s 38.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.577 | 29.577 | 29.577 | 0.0 | 97.63 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15213 | 0.15213 | 0.15213 | 0.0 | 0.50 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.48417 | 0.48417 | 0.48417 | 0.0 | 1.60 Other | | 0.08132 | | | 0.27 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8147 ave 8147 max 8147 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562170 ave 562170 max 562170 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562170 Ave neighs/atom = 140.542 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.20050047296, Press = -2.54003455608287 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -11069.427 -11069.427 -11230.156 -11230.156 310.94135 310.94135 69923.247 69923.247 347.64475 347.64475 21000 -11067.091 -11067.091 -11229.294 -11229.294 313.79149 313.79149 69893.676 69893.676 903.12106 903.12106 Loop time of 29.3537 on 1 procs for 1000 steps with 4000 atoms Performance: 2.943 ns/day, 8.154 hours/ns, 34.067 timesteps/s 39.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.776 | 28.776 | 28.776 | 0.0 | 98.03 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19168 | 0.19168 | 0.19168 | 0.0 | 0.65 Output | 4.0054e-05 | 4.0054e-05 | 4.0054e-05 | 0.0 | 0.00 Modify | 0.34469 | 0.34469 | 0.34469 | 0.0 | 1.17 Other | | 0.04114 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8158 ave 8158 max 8158 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562186 ave 562186 max 562186 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562186 Ave neighs/atom = 140.547 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.220671440629, Press = 1.09418261891922 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -11067.091 -11067.091 -11229.294 -11229.294 313.79149 313.79149 69893.676 69893.676 903.12106 903.12106 22000 -11064.92 -11064.92 -11226.529 -11226.529 312.64384 312.64384 69982.772 69982.772 -19.219639 -19.219639 Loop time of 28.6077 on 1 procs for 1000 steps with 4000 atoms Performance: 3.020 ns/day, 7.947 hours/ns, 34.956 timesteps/s 40.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.072 | 28.072 | 28.072 | 0.0 | 98.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14116 | 0.14116 | 0.14116 | 0.0 | 0.49 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.35343 | 0.35343 | 0.35343 | 0.0 | 1.24 Other | | 0.04121 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8155 ave 8155 max 8155 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562348 ave 562348 max 562348 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562348 Ave neighs/atom = 140.587 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.1801443169, Press = 1.51363636862095 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -11064.92 -11064.92 -11226.529 -11226.529 312.64384 312.64384 69982.772 69982.772 -19.219639 -19.219639 23000 -11069.238 -11069.238 -11228.617 -11228.617 308.32926 308.32926 69958.928 69958.928 -3.4579499 -3.4579499 Loop time of 29.2203 on 1 procs for 1000 steps with 4000 atoms Performance: 2.957 ns/day, 8.117 hours/ns, 34.223 timesteps/s 39.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.645 | 28.645 | 28.645 | 0.0 | 98.03 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14167 | 0.14167 | 0.14167 | 0.0 | 0.48 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.35235 | 0.35235 | 0.35235 | 0.0 | 1.21 Other | | 0.08099 | | | 0.28 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8148 ave 8148 max 8148 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562450 ave 562450 max 562450 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562450 Ave neighs/atom = 140.613 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.234204197044, Press = 1.61184607860124 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -11069.238 -11069.238 -11228.617 -11228.617 308.32926 308.32926 69958.928 69958.928 -3.4579499 -3.4579499 24000 -11064.987 -11064.987 -11225.101 -11225.101 309.75024 309.75024 69966.273 69966.273 282.96553 282.96553 Loop time of 29.5682 on 1 procs for 1000 steps with 4000 atoms Performance: 2.922 ns/day, 8.213 hours/ns, 33.820 timesteps/s 39.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.932 | 28.932 | 28.932 | 0.0 | 97.85 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14161 | 0.14161 | 0.14161 | 0.0 | 0.48 Output | 2.718e-05 | 2.718e-05 | 2.718e-05 | 0.0 | 0.00 Modify | 0.40303 | 0.40303 | 0.40303 | 0.0 | 1.36 Other | | 0.0911 | | | 0.31 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8160 ave 8160 max 8160 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562372 ave 562372 max 562372 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562372 Ave neighs/atom = 140.593 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.291102318183, Press = -0.263237605711722 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -11064.987 -11064.987 -11225.101 -11225.101 309.75024 309.75024 69966.273 69966.273 282.96553 282.96553 25000 -11067.546 -11067.546 -11232.457 -11232.457 319.03286 319.03286 69894.997 69894.997 524.9348 524.9348 Loop time of 28.3561 on 1 procs for 1000 steps with 4000 atoms Performance: 3.047 ns/day, 7.877 hours/ns, 35.266 timesteps/s 40.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.842 | 27.842 | 27.842 | 0.0 | 98.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11104 | 0.11104 | 0.11104 | 0.0 | 0.39 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.26191 | 0.26191 | 0.26191 | 0.0 | 0.92 Other | | 0.1413 | | | 0.50 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8158 ave 8158 max 8158 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562468 ave 562468 max 562468 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562468 Ave neighs/atom = 140.617 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.225657954066, Press = 1.97136186225028 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -11067.546 -11067.546 -11232.457 -11232.457 319.03286 319.03286 69894.997 69894.997 524.9348 524.9348 26000 -11070.337 -11070.337 -11231.628 -11231.628 312.02806 312.02806 69984.346 69984.346 -740.60666 -740.60666 Loop time of 33.8996 on 1 procs for 1000 steps with 4000 atoms Performance: 2.549 ns/day, 9.417 hours/ns, 29.499 timesteps/s 34.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.14 | 33.14 | 33.14 | 0.0 | 97.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11188 | 0.11188 | 0.11188 | 0.0 | 0.33 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.58647 | 0.58647 | 0.58647 | 0.0 | 1.73 Other | | 0.06122 | | | 0.18 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8144 ave 8144 max 8144 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562240 ave 562240 max 562240 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562240 Ave neighs/atom = 140.56 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.241992479995, Press = 1.32595711640784 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 26000 -11070.337 -11070.337 -11231.628 -11231.628 312.02806 312.02806 69984.346 69984.346 -740.60666 -740.60666 27000 -11067.508 -11067.508 -11227.046 -11227.046 308.63655 308.63655 69985.571 69985.571 -189.802 -189.802 Loop time of 34.858 on 1 procs for 1000 steps with 4000 atoms Performance: 2.479 ns/day, 9.683 hours/ns, 28.688 timesteps/s 33.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 34.219 | 34.219 | 34.219 | 0.0 | 98.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21289 | 0.21289 | 0.21289 | 0.0 | 0.61 Output | 5.6028e-05 | 5.6028e-05 | 5.6028e-05 | 0.0 | 0.00 Modify | 0.34462 | 0.34462 | 0.34462 | 0.0 | 0.99 Other | | 0.08178 | | | 0.23 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8148 ave 8148 max 8148 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 561844 ave 561844 max 561844 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 561844 Ave neighs/atom = 140.461 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 69947.681306397 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0