# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.080000005662441*${_u_distance} variable latticeconst_converted equal 4.080000005662441*1 lattice fcc ${latticeconst_converted} lattice fcc 4.08000000566244 Lattice spacing in x,y,z = 4.08 4.08 4.08 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (40.8 40.8 40.8) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000476122 secs variable mass_converted equal 107.8682*${_u_mass} variable mass_converted equal 107.8682*1 # specify which KIM Model to use pair_style meam/c pair_coeff * * ./SM_485325656366_000-files/b'library_AgTaO3.meam' Ag Ta O ./SM_485325656366_000-files/b'AgTaO3.meam' Ag mass 1 ${mass_converted} mass 1 107.8682 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 67917.3122827778 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 67917.3122827778/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 67917.3122827778/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 67917.3122827778/(1*1*${_u_distance}) variable V0_metal equal 67917.3122827778/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 67917.3122827778*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 67917.3122827778 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8.2 ghost atom cutoff = 8.2 binsize = 4.1, bins = 10 10 10 2 neighbor lists, perpetual/occasional/extra = 2 0 0 (1) pair meam/c, perpetual attributes: full, newton on pair build: full/bin/atomonly stencil: full/bin/3d bin: standard (2) pair meam/c, perpetual, half/full from (1) attributes: half, newton on pair build: halffull/newton stencil: none bin: none Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -11248.467 -11248.467 -11400 -11400 293.15 293.15 67917.312 67917.312 2383.1102 2383.1102 1000 -11123.752 -11123.752 -11274.621 -11274.621 291.8656 291.8656 68541.117 68541.117 -132.20925 -132.20925 Loop time of 305.668 on 1 procs for 1000 steps with 4000 atoms Performance: 0.283 ns/day, 84.908 hours/ns, 3.272 timesteps/s 25.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 304.57 | 304.57 | 304.57 | 0.0 | 99.64 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25201 | 0.25201 | 0.25201 | 0.0 | 0.08 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.67259 | 0.67259 | 0.67259 | 0.0 | 0.22 Other | | 0.1713 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 280000 ave 280000 max 280000 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 560000 ave 560000 max 560000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 560000 Ave neighs/atom = 140 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -11123.752 -11123.752 -11274.621 -11274.621 291.8656 291.8656 68541.117 68541.117 -132.20925 -132.20925 2000 -11114.553 -11114.553 -11269.161 -11269.161 299.09956 299.09956 68564.193 68564.193 -169.13303 -169.13303 Loop time of 299.932 on 1 procs for 1000 steps with 4000 atoms Performance: 0.288 ns/day, 83.314 hours/ns, 3.334 timesteps/s 25.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 299.07 | 299.07 | 299.07 | 0.0 | 99.71 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17619 | 0.17619 | 0.17619 | 0.0 | 0.06 Output | 4.22e-05 | 4.22e-05 | 4.22e-05 | 0.0 | 0.00 Modify | 0.63561 | 0.63561 | 0.63561 | 0.0 | 0.21 Other | | 0.05085 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7123 ave 7123 max 7123 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274502 ave 274502 max 274502 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 549004 ave 549004 max 549004 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 549004 Ave neighs/atom = 137.251 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -11114.553 -11114.553 -11269.161 -11269.161 299.09956 299.09956 68564.193 68564.193 -169.13303 -169.13303 3000 -11118.725 -11118.725 -11268.045 -11268.045 288.87029 288.87029 68521.312 68521.312 323.29963 323.29963 Loop time of 247.12 on 1 procs for 1000 steps with 4000 atoms Performance: 0.350 ns/day, 68.644 hours/ns, 4.047 timesteps/s 31.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 246.49 | 246.49 | 246.49 | 0.0 | 99.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17559 | 0.17559 | 0.17559 | 0.0 | 0.07 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.41154 | 0.41154 | 0.41154 | 0.0 | 0.17 Other | | 0.04037 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7053 ave 7053 max 7053 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274419 ave 274419 max 274419 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 548838 ave 548838 max 548838 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 548838 Ave neighs/atom = 137.209 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -11118.725 -11118.725 -11268.045 -11268.045 288.87029 288.87029 68521.312 68521.312 323.29963 323.29963 4000 -11123.522 -11123.522 -11272.111 -11272.111 287.45517 287.45517 68534.11 68534.11 -1.2151576 -1.2151576 Loop time of 197.786 on 1 procs for 1000 steps with 4000 atoms Performance: 0.437 ns/day, 54.941 hours/ns, 5.056 timesteps/s 38.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 197.19 | 197.19 | 197.19 | 0.0 | 99.70 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16607 | 0.16607 | 0.16607 | 0.0 | 0.08 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.37377 | 0.37377 | 0.37377 | 0.0 | 0.19 Other | | 0.06073 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7187 ave 7187 max 7187 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274530 ave 274530 max 274530 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 549060 ave 549060 max 549060 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 549060 Ave neighs/atom = 137.265 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -11123.522 -11123.522 -11272.111 -11272.111 287.45517 287.45517 68534.11 68534.11 -1.2151576 -1.2151576 5000 -11119.843 -11119.843 -11273.905 -11273.905 298.04278 298.04278 68526.568 68526.568 42.738718 42.738718 Loop time of 182.948 on 1 procs for 1000 steps with 4000 atoms Performance: 0.472 ns/day, 50.819 hours/ns, 5.466 timesteps/s 41.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 182.29 | 182.29 | 182.29 | 0.0 | 99.64 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16694 | 0.16694 | 0.16694 | 0.0 | 0.09 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.4504 | 0.4504 | 0.4504 | 0.0 | 0.25 Other | | 0.04053 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7122 ave 7122 max 7122 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274511 ave 274511 max 274511 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 549022 ave 549022 max 549022 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 549022 Ave neighs/atom = 137.256 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 294.567677223227, Press = -51.556118682013 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -11119.843 -11119.843 -11273.905 -11273.905 298.04278 298.04278 68526.568 68526.568 42.738718 42.738718 6000 -11116.43 -11116.43 -11267.81 -11267.81 292.85367 292.85367 68516.413 68516.413 223.80549 223.80549 Loop time of 169.511 on 1 procs for 1000 steps with 4000 atoms Performance: 0.510 ns/day, 47.086 hours/ns, 5.899 timesteps/s 44.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 169.08 | 169.08 | 169.08 | 0.0 | 99.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.065857 | 0.065857 | 0.065857 | 0.0 | 0.04 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.2648 | 0.2648 | 0.2648 | 0.0 | 0.16 Other | | 0.1006 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7194 ave 7194 max 7194 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274501 ave 274501 max 274501 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 549002 ave 549002 max 549002 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 549002 Ave neighs/atom = 137.25 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.867271372046, Press = -15.3177451135921 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -11116.43 -11116.43 -11267.81 -11267.81 292.85367 292.85367 68516.413 68516.413 223.80549 223.80549 7000 -11121.451 -11121.451 -11273.35 -11273.35 293.8588 293.8588 68594.322 68594.322 -960.14513 -960.14513 Loop time of 162.733 on 1 procs for 1000 steps with 4000 atoms Performance: 0.531 ns/day, 45.204 hours/ns, 6.145 timesteps/s 46.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 162.21 | 162.21 | 162.21 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.045846 | 0.045846 | 0.045846 | 0.0 | 0.03 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.41844 | 0.41844 | 0.41844 | 0.0 | 0.26 Other | | 0.06063 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7177 ave 7177 max 7177 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274550 ave 274550 max 274550 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 549100 ave 549100 max 549100 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 549100 Ave neighs/atom = 137.275 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.761889817036, Press = 3.28809495559498 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -11121.451 -11121.451 -11273.35 -11273.35 293.8588 293.8588 68594.322 68594.322 -960.14513 -960.14513 8000 -11120.641 -11120.641 -11272.916 -11272.916 294.58744 294.58744 68416.106 68416.106 1611.3748 1611.3748 Loop time of 164.848 on 1 procs for 1000 steps with 4000 atoms Performance: 0.524 ns/day, 45.791 hours/ns, 6.066 timesteps/s 45.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 164.36 | 164.36 | 164.36 | 0.0 | 99.71 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.045106 | 0.045106 | 0.045106 | 0.0 | 0.03 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.41884 | 0.41884 | 0.41884 | 0.0 | 0.25 Other | | 0.02057 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7042 ave 7042 max 7042 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274411 ave 274411 max 274411 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 548822 ave 548822 max 548822 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 548822 Ave neighs/atom = 137.206 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.846163638968, Press = 10.4340521357815 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -11120.641 -11120.641 -11272.916 -11272.916 294.58744 294.58744 68416.106 68416.106 1611.3748 1611.3748 9000 -11119.783 -11119.783 -11271.171 -11271.171 292.87123 292.87123 68539.362 68539.362 -200.45961 -200.45961 Loop time of 256.243 on 1 procs for 1000 steps with 4000 atoms Performance: 0.337 ns/day, 71.179 hours/ns, 3.903 timesteps/s 29.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 255.56 | 255.56 | 255.56 | 0.0 | 99.74 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14653 | 0.14653 | 0.14653 | 0.0 | 0.06 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.43115 | 0.43115 | 0.43115 | 0.0 | 0.17 Other | | 0.1008 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7116 ave 7116 max 7116 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274722 ave 274722 max 274722 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 549444 ave 549444 max 549444 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 549444 Ave neighs/atom = 137.361 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.985653153585, Press = -7.27487173069569 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -11119.783 -11119.783 -11271.171 -11271.171 292.87123 292.87123 68539.362 68539.362 -200.45961 -200.45961 10000 -11117.491 -11117.491 -11271.34 -11271.34 297.63047 297.63047 68594.902 68594.902 -838.20664 -838.20664 Loop time of 257.244 on 1 procs for 1000 steps with 4000 atoms Performance: 0.336 ns/day, 71.457 hours/ns, 3.887 timesteps/s 30.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 256.3 | 256.3 | 256.3 | 0.0 | 99.63 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26178 | 0.26178 | 0.26178 | 0.0 | 0.10 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.63296 | 0.63296 | 0.63296 | 0.0 | 0.25 Other | | 0.05124 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7097 ave 7097 max 7097 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274538 ave 274538 max 274538 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 549076 ave 549076 max 549076 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 549076 Ave neighs/atom = 137.269 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.088122032177, Press = 5.72617647873676 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -11117.491 -11117.491 -11271.34 -11271.34 297.63047 297.63047 68594.902 68594.902 -838.20664 -838.20664 11000 -11116.234 -11116.234 -11270.126 -11270.126 297.7152 297.7152 68557.036 68557.036 -297.26421 -297.26421 Loop time of 236.598 on 1 procs for 1000 steps with 4000 atoms Performance: 0.365 ns/day, 65.722 hours/ns, 4.227 timesteps/s 32.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 235.57 | 235.57 | 235.57 | 0.0 | 99.57 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25193 | 0.25193 | 0.25193 | 0.0 | 0.11 Output | 2.718e-05 | 2.718e-05 | 2.718e-05 | 0.0 | 0.00 Modify | 0.67194 | 0.67194 | 0.67194 | 0.0 | 0.28 Other | | 0.1012 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7144 ave 7144 max 7144 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274410 ave 274410 max 274410 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 548820 ave 548820 max 548820 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 548820 Ave neighs/atom = 137.205 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.167795639409, Press = 1.62507608364558 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -11116.234 -11116.234 -11270.126 -11270.126 297.7152 297.7152 68557.036 68557.036 -297.26421 -297.26421 12000 -11120.18 -11120.18 -11271.064 -11271.064 291.89578 291.89578 68533.806 68533.806 -24.730378 -24.730378 Loop time of 224.407 on 1 procs for 1000 steps with 4000 atoms Performance: 0.385 ns/day, 62.335 hours/ns, 4.456 timesteps/s 34.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 223.74 | 223.74 | 223.74 | 0.0 | 99.70 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17713 | 0.17713 | 0.17713 | 0.0 | 0.08 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.45088 | 0.45088 | 0.45088 | 0.0 | 0.20 Other | | 0.04154 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7113 ave 7113 max 7113 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274452 ave 274452 max 274452 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 548904 ave 548904 max 548904 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 548904 Ave neighs/atom = 137.226 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.428367674329, Press = 0.768162240534335 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -11120.18 -11120.18 -11271.064 -11271.064 291.89578 291.89578 68533.806 68533.806 -24.730378 -24.730378 13000 -11120.291 -11120.291 -11272.294 -11272.294 294.06126 294.06126 68521.526 68521.526 136.55058 136.55058 Loop time of 189.25 on 1 procs for 1000 steps with 4000 atoms Performance: 0.457 ns/day, 52.570 hours/ns, 5.284 timesteps/s 40.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 188.64 | 188.64 | 188.64 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13913 | 0.13913 | 0.13913 | 0.0 | 0.07 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.41076 | 0.41076 | 0.41076 | 0.0 | 0.22 Other | | 0.06104 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7162 ave 7162 max 7162 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274496 ave 274496 max 274496 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 548992 ave 548992 max 548992 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 548992 Ave neighs/atom = 137.248 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.409354672732, Press = 2.7644457265215 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -11120.291 -11120.291 -11272.294 -11272.294 294.06126 294.06126 68521.526 68521.526 136.55058 136.55058 14000 -11119.008 -11119.008 -11272.725 -11272.725 297.3753 297.3753 68536.736 68536.736 -121.87132 -121.87132 Loop time of 163.798 on 1 procs for 1000 steps with 4000 atoms Performance: 0.527 ns/day, 45.499 hours/ns, 6.105 timesteps/s 47.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 163.35 | 163.35 | 163.35 | 0.0 | 99.73 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.067142 | 0.067142 | 0.067142 | 0.0 | 0.04 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.34133 | 0.34133 | 0.34133 | 0.0 | 0.21 Other | | 0.04106 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7129 ave 7129 max 7129 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274556 ave 274556 max 274556 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 549112 ave 549112 max 549112 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 549112 Ave neighs/atom = 137.278 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.459311908029, Press = -6.6970422342917 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -11119.008 -11119.008 -11272.725 -11272.725 297.3753 297.3753 68536.736 68536.736 -121.87132 -121.87132 15000 -11116.601 -11116.601 -11270.799 -11270.799 298.30506 298.30506 68575.959 68575.959 -465.03998 -465.03998 Loop time of 169.891 on 1 procs for 1000 steps with 4000 atoms Performance: 0.509 ns/day, 47.192 hours/ns, 5.886 timesteps/s 45.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 169.51 | 169.51 | 169.51 | 0.0 | 99.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.066744 | 0.066744 | 0.066744 | 0.0 | 0.04 Output | 2.5034e-05 | 2.5034e-05 | 2.5034e-05 | 0.0 | 0.00 Modify | 0.29275 | 0.29275 | 0.29275 | 0.0 | 0.17 Other | | 0.02073 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7074 ave 7074 max 7074 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274513 ave 274513 max 274513 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 549026 ave 549026 max 549026 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 549026 Ave neighs/atom = 137.256 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.469836499559, Press = 2.56284599358467 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -11116.601 -11116.601 -11270.799 -11270.799 298.30506 298.30506 68575.959 68575.959 -465.03998 -465.03998 16000 -11118.057 -11118.057 -11269.922 -11269.922 293.79288 293.79288 68458.881 68458.881 1003.5553 1003.5553 Loop time of 171.279 on 1 procs for 1000 steps with 4000 atoms Performance: 0.504 ns/day, 47.578 hours/ns, 5.838 timesteps/s 45.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 170.77 | 170.77 | 170.77 | 0.0 | 99.70 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.066819 | 0.066819 | 0.066819 | 0.0 | 0.04 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.40145 | 0.40145 | 0.40145 | 0.0 | 0.23 Other | | 0.04126 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7085 ave 7085 max 7085 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274476 ave 274476 max 274476 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 548952 ave 548952 max 548952 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 548952 Ave neighs/atom = 137.238 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.53764186046, Press = 0.334855478595414 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -11118.057 -11118.057 -11269.922 -11269.922 293.79288 293.79288 68458.881 68458.881 1003.5553 1003.5553 17000 -11124.922 -11124.922 -11271.82 -11271.82 284.18399 284.18399 68611.747 68611.747 -1221.0945 -1221.0945 Loop time of 186.335 on 1 procs for 1000 steps with 4000 atoms Performance: 0.464 ns/day, 51.760 hours/ns, 5.367 timesteps/s 41.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 185.67 | 185.67 | 185.67 | 0.0 | 99.64 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.087814 | 0.087814 | 0.087814 | 0.0 | 0.05 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.48586 | 0.48586 | 0.48586 | 0.0 | 0.26 Other | | 0.09528 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7195 ave 7195 max 7195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274603 ave 274603 max 274603 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 549206 ave 549206 max 549206 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 549206 Ave neighs/atom = 137.302 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.489480473131, Press = -1.16776005405443 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -11124.922 -11124.922 -11271.82 -11271.82 284.18399 284.18399 68611.747 68611.747 -1221.0945 -1221.0945 18000 -11117.038 -11117.038 -11269.765 -11269.765 295.46038 295.46038 68509.033 68509.033 428.8487 428.8487 Loop time of 176.637 on 1 procs for 1000 steps with 4000 atoms Performance: 0.489 ns/day, 49.066 hours/ns, 5.661 timesteps/s 43.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 176.14 | 176.14 | 176.14 | 0.0 | 99.72 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11782 | 0.11782 | 0.11782 | 0.0 | 0.07 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.33153 | 0.33153 | 0.33153 | 0.0 | 0.19 Other | | 0.05131 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7152 ave 7152 max 7152 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274379 ave 274379 max 274379 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 548758 ave 548758 max 548758 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 548758 Ave neighs/atom = 137.19 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.35693867338, Press = 2.34785787586095 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -11117.038 -11117.038 -11269.765 -11269.765 295.46038 295.46038 68509.033 68509.033 428.8487 428.8487 19000 -11117.896 -11117.896 -11271.758 -11271.758 297.6555 297.6555 68453.642 68453.642 1267.3968 1267.3968 Loop time of 170.461 on 1 procs for 1000 steps with 4000 atoms Performance: 0.507 ns/day, 47.350 hours/ns, 5.866 timesteps/s 45.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 170.06 | 170.06 | 170.06 | 0.0 | 99.77 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.047759 | 0.047759 | 0.047759 | 0.0 | 0.03 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.33156 | 0.33156 | 0.33156 | 0.0 | 0.19 Other | | 0.02109 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7230 ave 7230 max 7230 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274572 ave 274572 max 274572 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 549144 ave 549144 max 549144 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 549144 Ave neighs/atom = 137.286 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.344059887853, Press = -1.24562539090477 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -11117.896 -11117.896 -11271.758 -11271.758 297.6555 297.6555 68453.642 68453.642 1267.3968 1267.3968 20000 -11122.951 -11122.951 -11274.403 -11274.403 292.99389 292.99389 68564.178 68564.178 -502.19684 -502.19684 Loop time of 169.564 on 1 procs for 1000 steps with 4000 atoms Performance: 0.510 ns/day, 47.101 hours/ns, 5.897 timesteps/s 45.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 169.04 | 169.04 | 169.04 | 0.0 | 99.69 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12811 | 0.12811 | 0.12811 | 0.0 | 0.08 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.37085 | 0.37085 | 0.37085 | 0.0 | 0.22 Other | | 0.02089 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7189 ave 7189 max 7189 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274658 ave 274658 max 274658 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 549316 ave 549316 max 549316 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 549316 Ave neighs/atom = 137.329 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.217037624356, Press = -0.893124446676812 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -11122.951 -11122.951 -11274.403 -11274.403 292.99389 292.99389 68564.178 68564.178 -502.19684 -502.19684 21000 -11122.953 -11122.953 -11271.347 -11271.347 287.07769 287.07769 68554.84 68554.84 -412.13732 -412.13732 Loop time of 164.98 on 1 procs for 1000 steps with 4000 atoms Performance: 0.524 ns/day, 45.828 hours/ns, 6.061 timesteps/s 46.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 164.45 | 164.45 | 164.45 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.08776 | 0.08776 | 0.08776 | 0.0 | 0.05 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.40301 | 0.40301 | 0.40301 | 0.0 | 0.24 Other | | 0.04131 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7113 ave 7113 max 7113 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274551 ave 274551 max 274551 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 549102 ave 549102 max 549102 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 549102 Ave neighs/atom = 137.275 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.171009162671, Press = 1.23905155306093 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -11122.953 -11122.953 -11271.347 -11271.347 287.07769 287.07769 68554.84 68554.84 -412.13732 -412.13732 22000 -11118.75 -11118.75 -11271.775 -11271.775 296.03835 296.03835 68494.736 68494.736 453.31002 453.31002 Loop time of 138.588 on 1 procs for 1000 steps with 4000 atoms Performance: 0.623 ns/day, 38.497 hours/ns, 7.216 timesteps/s 55.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 138.21 | 138.21 | 138.21 | 0.0 | 99.72 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.087274 | 0.087274 | 0.087274 | 0.0 | 0.06 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.27468 | 0.27468 | 0.27468 | 0.0 | 0.20 Other | | 0.02112 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7072 ave 7072 max 7072 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274537 ave 274537 max 274537 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 549074 ave 549074 max 549074 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 549074 Ave neighs/atom = 137.268 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.197694680495, Press = 0.680883985896236 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 19.57 | 19.57 | 19.57 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -11118.75 -11118.75 -11271.775 -11271.775 296.03835 296.03835 68494.736 68494.736 453.31002 453.31002 23000 -11122.178 -11122.178 -11273.474 -11273.474 292.69102 292.69102 68491.15 68491.15 642.31118 642.31118 Loop time of 118.798 on 1 procs for 1000 steps with 4000 atoms Performance: 0.727 ns/day, 32.999 hours/ns, 8.418 timesteps/s 65.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 118.53 | 118.53 | 118.53 | 0.0 | 99.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.047515 | 0.047515 | 0.047515 | 0.0 | 0.04 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.19468 | 0.19468 | 0.19468 | 0.0 | 0.16 Other | | 0.02177 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7107 ave 7107 max 7107 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 274571 ave 274571 max 274571 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 549142 ave 549142 max 549142 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 549142 Ave neighs/atom = 137.286 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 68531.1862225462 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0