# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.7913857132196505*${_u_distance} variable latticeconst_converted equal 5.7913857132196505*1 lattice bcc ${latticeconst_converted} lattice bcc 5.79138571321965 Lattice spacing in x,y,z = 5.79139 5.79139 5.79139 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (57.9139 57.9139 57.9139) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms create_atoms CPU = 0.010308 secs variable mass_converted equal 85.4678*${_u_mass} variable mass_converted equal 85.4678*1 # specify which KIM Model to use pair_style kim Morse_Shifted_GirifalcoWeizer_1959LowCutoff_Rb__MO_754498969542_003 WARNING: KIM Model does not provide `partialParticleVirial'; virial per atom will be zero (src/KIM/pair_kim.cpp:1089) pair_coeff * * Rb mass 1 ${mass_converted} mass 1 85.4678 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 194243.936722195 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 194243.936722195/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 194243.936722195/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 194243.936722195/(1*1*${_u_distance}) variable V0_metal equal 194243.936722195/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 194243.936722195*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 194243.936722195 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 21.5283 ghost atom cutoff = 21.5283 binsize = 10.7642, bins = 6 6 6 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 21.5283 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 6.658 | 6.658 | 6.658 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -1482.4738 -1482.4738 -1563.389 -1563.389 313.15 313.15 194243.94 194243.94 444.93959 444.93959 1000 -1375.9459 -1375.9459 -1459.276 -1459.276 322.49619 322.49619 211129.54 211129.54 -94.679243 -94.679243 Loop time of 45.0877 on 1 procs for 1000 steps with 2000 atoms Performance: 1.916 ns/day, 12.524 hours/ns, 22.179 timesteps/s 44.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.326 | 44.326 | 44.326 | 0.0 | 98.31 Neigh | 0.40677 | 0.40677 | 0.40677 | 0.0 | 0.90 Comm | 0.11146 | 0.11146 | 0.11146 | 0.0 | 0.25 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.17017 | 0.17017 | 0.17017 | 0.0 | 0.38 Other | | 0.07357 | | | 0.16 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8531 ave 8531 max 8531 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 780258 ave 780258 max 780258 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 780258 Ave neighs/atom = 390.129 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -1375.9459 -1375.9459 -1459.276 -1459.276 322.49619 322.49619 211129.54 211129.54 -94.679243 -94.679243 2000 -1385.5489 -1385.5489 -1468.9242 -1468.9242 322.67107 322.67107 208800.17 208800.17 11.151481 11.151481 Loop time of 42.2333 on 1 procs for 1000 steps with 2000 atoms Performance: 2.046 ns/day, 11.731 hours/ns, 23.678 timesteps/s 45.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.567 | 41.567 | 41.567 | 0.0 | 98.42 Neigh | 0.35116 | 0.35116 | 0.35116 | 0.0 | 0.83 Comm | 0.1396 | 0.1396 | 0.1396 | 0.0 | 0.33 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.14206 | 0.14206 | 0.14206 | 0.0 | 0.34 Other | | 0.03369 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8513 ave 8513 max 8513 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 791248 ave 791248 max 791248 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 791248 Ave neighs/atom = 395.624 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -1385.5489 -1385.5489 -1468.9242 -1468.9242 322.67107 322.67107 208800.17 208800.17 11.151481 11.151481 3000 -1393.7861 -1393.7861 -1473.4102 -1473.4102 308.15369 308.15369 207817.76 207817.76 34.136929 34.136929 Loop time of 42.63 on 1 procs for 1000 steps with 2000 atoms Performance: 2.027 ns/day, 11.842 hours/ns, 23.458 timesteps/s 45.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.019 | 42.019 | 42.019 | 0.0 | 98.57 Neigh | 0.3043 | 0.3043 | 0.3043 | 0.0 | 0.71 Comm | 0.089725 | 0.089725 | 0.089725 | 0.0 | 0.21 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.17286 | 0.17286 | 0.17286 | 0.0 | 0.41 Other | | 0.04363 | | | 0.10 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8565 ave 8565 max 8565 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 791994 ave 791994 max 791994 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 791994 Ave neighs/atom = 395.997 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -1393.7861 -1393.7861 -1473.4102 -1473.4102 308.15369 308.15369 207817.76 207817.76 34.136929 34.136929 4000 -1392.7456 -1392.7456 -1471.875 -1471.875 306.23909 306.23909 208843.24 208843.24 -34.549006 -34.549006 Loop time of 44.8345 on 1 procs for 1000 steps with 2000 atoms Performance: 1.927 ns/day, 12.454 hours/ns, 22.304 timesteps/s 43.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.176 | 44.176 | 44.176 | 0.0 | 98.53 Neigh | 0.32075 | 0.32075 | 0.32075 | 0.0 | 0.72 Comm | 0.10016 | 0.10016 | 0.10016 | 0.0 | 0.22 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.22428 | 0.22428 | 0.22428 | 0.0 | 0.50 Other | | 0.01355 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8516 ave 8516 max 8516 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 783996 ave 783996 max 783996 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 783996 Ave neighs/atom = 391.998 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -1392.7456 -1392.7456 -1471.875 -1471.875 306.23909 306.23909 208843.24 208843.24 -34.549006 -34.549006 5000 -1388.7992 -1388.7992 -1469.675 -1469.675 312.99791 312.99791 209685.87 209685.87 -72.502827 -72.502827 Loop time of 43.5818 on 1 procs for 1000 steps with 2000 atoms Performance: 1.982 ns/day, 12.106 hours/ns, 22.945 timesteps/s 44.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.924 | 42.924 | 42.924 | 0.0 | 98.49 Neigh | 0.40987 | 0.40987 | 0.40987 | 0.0 | 0.94 Comm | 0.089767 | 0.089767 | 0.089767 | 0.0 | 0.21 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.14459 | 0.14459 | 0.14459 | 0.0 | 0.33 Other | | 0.01348 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8545 ave 8545 max 8545 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 788822 ave 788822 max 788822 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 788822 Ave neighs/atom = 394.411 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 316.425915347149, Press = -28.0311148321442 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -1388.7992 -1388.7992 -1469.675 -1469.675 312.99791 312.99791 209685.87 209685.87 -72.502827 -72.502827 6000 -1388.7935 -1388.7935 -1470.6996 -1470.6996 316.98514 316.98514 208075.58 208075.58 45.729221 45.729221 Loop time of 42.183 on 1 procs for 1000 steps with 2000 atoms Performance: 2.048 ns/day, 11.718 hours/ns, 23.706 timesteps/s 46.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.419 | 41.419 | 41.419 | 0.0 | 98.19 Neigh | 0.35258 | 0.35258 | 0.35258 | 0.0 | 0.84 Comm | 0.090498 | 0.090498 | 0.090498 | 0.0 | 0.21 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.28775 | 0.28775 | 0.28775 | 0.0 | 0.68 Other | | 0.0336 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8611 ave 8611 max 8611 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 789728 ave 789728 max 789728 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 789728 Ave neighs/atom = 394.864 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.83375692869, Press = -8.6909449134279 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -1388.7935 -1388.7935 -1470.6996 -1470.6996 316.98514 316.98514 208075.58 208075.58 45.729221 45.729221 7000 -1389.1251 -1389.1251 -1471.2182 -1471.2182 317.70878 317.70878 208129.48 208129.48 33.834909 33.834909 Loop time of 43.1853 on 1 procs for 1000 steps with 2000 atoms Performance: 2.001 ns/day, 11.996 hours/ns, 23.156 timesteps/s 45.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.483 | 42.483 | 42.483 | 0.0 | 98.37 Neigh | 0.37068 | 0.37068 | 0.37068 | 0.0 | 0.86 Comm | 0.11075 | 0.11075 | 0.11075 | 0.0 | 0.26 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.18744 | 0.18744 | 0.18744 | 0.0 | 0.43 Other | | 0.03353 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8637 ave 8637 max 8637 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 788616 ave 788616 max 788616 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 788616 Ave neighs/atom = 394.308 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.433192196573, Press = -4.74936925698153 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -1389.1251 -1389.1251 -1471.2182 -1471.2182 317.70878 317.70878 208129.48 208129.48 33.834909 33.834909 8000 -1390.8189 -1390.8189 -1471.863 -1471.863 313.64877 313.64877 208702.47 208702.47 -16.498727 -16.498727 Loop time of 43.4032 on 1 procs for 1000 steps with 2000 atoms Performance: 1.991 ns/day, 12.056 hours/ns, 23.040 timesteps/s 44.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.678 | 42.678 | 42.678 | 0.0 | 98.33 Neigh | 0.33709 | 0.33709 | 0.33709 | 0.0 | 0.78 Comm | 0.12033 | 0.12033 | 0.12033 | 0.0 | 0.28 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.23412 | 0.23412 | 0.23412 | 0.0 | 0.54 Other | | 0.03366 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8600 ave 8600 max 8600 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 787826 ave 787826 max 787826 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 787826 Ave neighs/atom = 393.913 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.108473274752, Press = -2.70701501115912 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -1390.8189 -1390.8189 -1471.863 -1471.863 313.64877 313.64877 208702.47 208702.47 -16.498727 -16.498727 9000 -1390.7073 -1390.7073 -1472.2084 -1472.2084 315.41745 315.41745 207340.35 207340.35 87.355427 87.355427 Loop time of 43.1637 on 1 procs for 1000 steps with 2000 atoms Performance: 2.002 ns/day, 11.990 hours/ns, 23.168 timesteps/s 44.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.544 | 42.544 | 42.544 | 0.0 | 98.56 Neigh | 0.36902 | 0.36902 | 0.36902 | 0.0 | 0.85 Comm | 0.070153 | 0.070153 | 0.070153 | 0.0 | 0.16 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.16716 | 0.16716 | 0.16716 | 0.0 | 0.39 Other | | 0.01339 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8543 ave 8543 max 8543 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 793686 ave 793686 max 793686 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 793686 Ave neighs/atom = 396.843 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.051871410077, Press = -2.63857291593418 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -1390.7073 -1390.7073 -1472.2084 -1472.2084 315.41745 315.41745 207340.35 207340.35 87.355427 87.355427 10000 -1389.4651 -1389.4651 -1471.6104 -1471.6104 317.91084 317.91084 209771.83 209771.83 -83.197392 -83.197392 Loop time of 43.8359 on 1 procs for 1000 steps with 2000 atoms Performance: 1.971 ns/day, 12.177 hours/ns, 22.812 timesteps/s 44.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.169 | 43.169 | 43.169 | 0.0 | 98.48 Neigh | 0.40513 | 0.40513 | 0.40513 | 0.0 | 0.92 Comm | 0.07022 | 0.07022 | 0.07022 | 0.0 | 0.16 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.12806 | 0.12806 | 0.12806 | 0.0 | 0.29 Other | | 0.06339 | | | 0.14 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8544 ave 8544 max 8544 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 782782 ave 782782 max 782782 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 782782 Ave neighs/atom = 391.391 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.240548281428, Press = -3.00984396085298 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -1389.4651 -1389.4651 -1471.6104 -1471.6104 317.91084 317.91084 209771.83 209771.83 -83.197392 -83.197392 11000 -1391.1628 -1391.1628 -1468.9711 -1468.9711 301.12615 301.12615 209465.86 209465.86 -69.310266 -69.310266 Loop time of 40.1127 on 1 procs for 1000 steps with 2000 atoms Performance: 2.154 ns/day, 11.142 hours/ns, 24.930 timesteps/s 48.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.525 | 39.525 | 39.525 | 0.0 | 98.53 Neigh | 0.3546 | 0.3546 | 0.3546 | 0.0 | 0.88 Comm | 0.091452 | 0.091452 | 0.091452 | 0.0 | 0.23 Output | 2.1935e-05 | 2.1935e-05 | 2.1935e-05 | 0.0 | 0.00 Modify | 0.12808 | 0.12808 | 0.12808 | 0.0 | 0.32 Other | | 0.01366 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8583 ave 8583 max 8583 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 788806 ave 788806 max 788806 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 788806 Ave neighs/atom = 394.403 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.542478109069, Press = 0.010993358196815 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -1391.1628 -1391.1628 -1468.9711 -1468.9711 301.12615 301.12615 209465.86 209465.86 -69.310266 -69.310266 12000 -1397.2746 -1397.2746 -1476.0492 -1476.0492 304.8661 304.8661 207027.77 207027.77 59.82256 59.82256 Loop time of 39.255 on 1 procs for 1000 steps with 2000 atoms Performance: 2.201 ns/day, 10.904 hours/ns, 25.474 timesteps/s 49.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.654 | 38.654 | 38.654 | 0.0 | 98.47 Neigh | 0.22295 | 0.22295 | 0.22295 | 0.0 | 0.57 Comm | 0.12977 | 0.12977 | 0.12977 | 0.0 | 0.33 Output | 2.718e-05 | 2.718e-05 | 2.718e-05 | 0.0 | 0.00 Modify | 0.23517 | 0.23517 | 0.23517 | 0.0 | 0.60 Other | | 0.01334 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8645 ave 8645 max 8645 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 792396 ave 792396 max 792396 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 792396 Ave neighs/atom = 396.198 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.443753800879, Press = -1.53633525237287 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -1397.2746 -1397.2746 -1476.0492 -1476.0492 304.8661 304.8661 207027.77 207027.77 59.82256 59.82256 13000 -1387.3083 -1387.3083 -1467.3883 -1467.3883 309.91795 309.91795 209797.48 209797.48 -71.309477 -71.309477 Loop time of 38.6962 on 1 procs for 1000 steps with 2000 atoms Performance: 2.233 ns/day, 10.749 hours/ns, 25.842 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.197 | 38.197 | 38.197 | 0.0 | 98.71 Neigh | 0.28798 | 0.28798 | 0.28798 | 0.0 | 0.74 Comm | 0.070124 | 0.070124 | 0.070124 | 0.0 | 0.18 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.12767 | 0.12767 | 0.12767 | 0.0 | 0.33 Other | | 0.01345 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8556 ave 8556 max 8556 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 785048 ave 785048 max 785048 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 785048 Ave neighs/atom = 392.524 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.678008789691, Press = -1.33406969063941 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -1387.3083 -1387.3083 -1467.3883 -1467.3883 309.91795 309.91795 209797.48 209797.48 -71.309477 -71.309477 14000 -1390.9704 -1390.9704 -1472.5938 -1472.5938 315.89131 315.89131 208135.96 208135.96 21.608912 21.608912 Loop time of 38.6481 on 1 procs for 1000 steps with 2000 atoms Performance: 2.236 ns/day, 10.736 hours/ns, 25.875 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.103 | 38.103 | 38.103 | 0.0 | 98.59 Neigh | 0.3137 | 0.3137 | 0.3137 | 0.0 | 0.81 Comm | 0.11024 | 0.11024 | 0.11024 | 0.0 | 0.29 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.10791 | 0.10791 | 0.10791 | 0.0 | 0.28 Other | | 0.01342 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8576 ave 8576 max 8576 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 791434 ave 791434 max 791434 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 791434 Ave neighs/atom = 395.717 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.866976121897, Press = -0.586255233109319 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -1390.9704 -1390.9704 -1472.5938 -1472.5938 315.89131 315.89131 208135.96 208135.96 21.608912 21.608912 15000 -1394.2346 -1394.2346 -1475.088 -1475.088 312.91089 312.91089 207451.51 207451.51 54.490141 54.490141 Loop time of 38.6349 on 1 procs for 1000 steps with 2000 atoms Performance: 2.236 ns/day, 10.732 hours/ns, 25.883 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.033 | 38.033 | 38.033 | 0.0 | 98.44 Neigh | 0.31072 | 0.31072 | 0.31072 | 0.0 | 0.80 Comm | 0.13029 | 0.13029 | 0.13029 | 0.0 | 0.34 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.14775 | 0.14775 | 0.14775 | 0.0 | 0.38 Other | | 0.01353 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8626 ave 8626 max 8626 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 790488 ave 790488 max 790488 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 790488 Ave neighs/atom = 395.244 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.943614987585, Press = -1.08230957698686 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -1394.2346 -1394.2346 -1475.088 -1475.088 312.91089 312.91089 207451.51 207451.51 54.490141 54.490141 16000 -1387.1961 -1387.1961 -1469.6756 -1469.6756 319.20427 319.20427 209370.98 209370.98 -40.622221 -40.622221 Loop time of 36.1455 on 1 procs for 1000 steps with 2000 atoms Performance: 2.390 ns/day, 10.040 hours/ns, 27.666 timesteps/s 53.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.563 | 35.563 | 35.563 | 0.0 | 98.39 Neigh | 0.24987 | 0.24987 | 0.24987 | 0.0 | 0.69 Comm | 0.090719 | 0.090719 | 0.090719 | 0.0 | 0.25 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.22864 | 0.22864 | 0.22864 | 0.0 | 0.63 Other | | 0.01373 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8554 ave 8554 max 8554 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 786204 ave 786204 max 786204 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 786204 Ave neighs/atom = 393.102 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.934800761118, Press = -0.8020252706555 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -1387.1961 -1387.1961 -1469.6756 -1469.6756 319.20427 319.20427 209370.98 209370.98 -40.622221 -40.622221 17000 -1387.2801 -1387.2801 -1469.3407 -1469.3407 317.58298 317.58298 207038.34 207038.34 130.32547 130.32547 Loop time of 33.9949 on 1 procs for 1000 steps with 2000 atoms Performance: 2.542 ns/day, 9.443 hours/ns, 29.416 timesteps/s 56.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.41 | 33.41 | 33.41 | 0.0 | 98.28 Neigh | 0.31271 | 0.31271 | 0.31271 | 0.0 | 0.92 Comm | 0.069695 | 0.069695 | 0.069695 | 0.0 | 0.21 Output | 2.2888e-05 | 2.2888e-05 | 2.2888e-05 | 0.0 | 0.00 Modify | 0.12901 | 0.12901 | 0.12901 | 0.0 | 0.38 Other | | 0.0736 | | | 0.22 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8616 ave 8616 max 8616 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 796308 ave 796308 max 796308 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 796308 Ave neighs/atom = 398.154 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.942377320135, Press = -0.308411590442412 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -1387.2801 -1387.2801 -1469.3407 -1469.3407 317.58298 317.58298 207038.34 207038.34 130.32547 130.32547 18000 -1387.6419 -1387.6419 -1469.7544 -1469.7544 317.78416 317.78416 208974.95 208974.95 -18.722136 -18.722136 Loop time of 32.5151 on 1 procs for 1000 steps with 2000 atoms Performance: 2.657 ns/day, 9.032 hours/ns, 30.755 timesteps/s 59.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.986 | 31.986 | 31.986 | 0.0 | 98.37 Neigh | 0.30864 | 0.30864 | 0.30864 | 0.0 | 0.95 Comm | 0.049708 | 0.049708 | 0.049708 | 0.0 | 0.15 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.11753 | 0.11753 | 0.11753 | 0.0 | 0.36 Other | | 0.05352 | | | 0.16 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8565 ave 8565 max 8565 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 784664 ave 784664 max 784664 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 784664 Ave neighs/atom = 392.332 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.948517189153, Press = -1.12828047463698 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -1387.6419 -1387.6419 -1469.7544 -1469.7544 317.78416 317.78416 208974.95 208974.95 -18.722136 -18.722136 19000 -1390.7101 -1390.7101 -1473.7855 -1473.7855 321.51011 321.51011 208300.24 208300.24 6.4629607 6.4629607 Loop time of 33.6467 on 1 procs for 1000 steps with 2000 atoms Performance: 2.568 ns/day, 9.346 hours/ns, 29.721 timesteps/s 57.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.096 | 33.096 | 33.096 | 0.0 | 98.36 Neigh | 0.27446 | 0.27446 | 0.27446 | 0.0 | 0.82 Comm | 0.12352 | 0.12352 | 0.12352 | 0.0 | 0.37 Output | 2.0981e-05 | 2.0981e-05 | 2.0981e-05 | 0.0 | 0.00 Modify | 0.13911 | 0.13911 | 0.13911 | 0.0 | 0.41 Other | | 0.01351 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8600 ave 8600 max 8600 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 790878 ave 790878 max 790878 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 790878 Ave neighs/atom = 395.439 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.950052420758, Press = -0.302362733507793 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -1390.7101 -1390.7101 -1473.7855 -1473.7855 321.51011 321.51011 208300.24 208300.24 6.4629607 6.4629607 20000 -1390.6022 -1390.6022 -1470.0112 -1470.0112 307.32111 307.32111 208185.95 208185.95 25.743178 25.743178 Loop time of 33.9336 on 1 procs for 1000 steps with 2000 atoms Performance: 2.546 ns/day, 9.426 hours/ns, 29.469 timesteps/s 56.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.336 | 33.336 | 33.336 | 0.0 | 98.24 Neigh | 0.26373 | 0.26373 | 0.26373 | 0.0 | 0.78 Comm | 0.1104 | 0.1104 | 0.1104 | 0.0 | 0.33 Output | 2.1935e-05 | 2.1935e-05 | 2.1935e-05 | 0.0 | 0.00 Modify | 0.20959 | 0.20959 | 0.20959 | 0.0 | 0.62 Other | | 0.01366 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8600 ave 8600 max 8600 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 789564 ave 789564 max 789564 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 789564 Ave neighs/atom = 394.782 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.091293498902, Press = -0.652445077830823 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -1390.6022 -1390.6022 -1470.0112 -1470.0112 307.32111 307.32111 208185.95 208185.95 25.743178 25.743178 21000 -1389.165 -1389.165 -1473.4841 -1473.4841 326.32341 326.32341 208407.38 208407.38 7.6973449 7.6973449 Loop time of 32.7252 on 1 procs for 1000 steps with 2000 atoms Performance: 2.640 ns/day, 9.090 hours/ns, 30.558 timesteps/s 58.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 32.224 | 32.224 | 32.224 | 0.0 | 98.47 Neigh | 0.26892 | 0.26892 | 0.26892 | 0.0 | 0.82 Comm | 0.069606 | 0.069606 | 0.069606 | 0.0 | 0.21 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.14872 | 0.14872 | 0.14872 | 0.0 | 0.45 Other | | 0.01358 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8604 ave 8604 max 8604 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 788298 ave 788298 max 788298 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 788298 Ave neighs/atom = 394.149 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.075912806426, Press = -0.702057458482033 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -1389.165 -1389.165 -1473.4841 -1473.4841 326.32341 326.32341 208407.38 208407.38 7.6973449 7.6973449 22000 -1390.1114 -1390.1114 -1469.7441 -1469.7441 308.18657 308.18657 208017.22 208017.22 42.433992 42.433992 Loop time of 34.2191 on 1 procs for 1000 steps with 2000 atoms Performance: 2.525 ns/day, 9.505 hours/ns, 29.223 timesteps/s 56.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.663 | 33.663 | 33.663 | 0.0 | 98.37 Neigh | 0.28254 | 0.28254 | 0.28254 | 0.0 | 0.83 Comm | 0.069709 | 0.069709 | 0.069709 | 0.0 | 0.20 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.19024 | 0.19024 | 0.19024 | 0.0 | 0.56 Other | | 0.01363 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8561 ave 8561 max 8561 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 790760 ave 790760 max 790760 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 790760 Ave neighs/atom = 395.38 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.203706454887, Press = -0.642902654970035 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -1390.1114 -1390.1114 -1469.7441 -1469.7441 308.18657 308.18657 208017.22 208017.22 42.433992 42.433992 23000 -1390.5271 -1390.5271 -1473.6983 -1473.6983 321.88109 321.88109 208401.3 208401.3 2.6134324 2.6134324 Loop time of 33.7657 on 1 procs for 1000 steps with 2000 atoms Performance: 2.559 ns/day, 9.379 hours/ns, 29.616 timesteps/s 56.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.353 | 33.353 | 33.353 | 0.0 | 98.78 Neigh | 0.2389 | 0.2389 | 0.2389 | 0.0 | 0.71 Comm | 0.049649 | 0.049649 | 0.049649 | 0.0 | 0.15 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.10979 | 0.10979 | 0.10979 | 0.0 | 0.33 Other | | 0.01417 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8590 ave 8590 max 8590 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 786248 ave 786248 max 786248 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 786248 Ave neighs/atom = 393.124 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.283033587832, Press = -0.825885941667643 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -1390.5271 -1390.5271 -1473.6983 -1473.6983 321.88109 321.88109 208401.3 208401.3 2.6134324 2.6134324 24000 -1390.0145 -1390.0145 -1471.7146 -1471.7146 316.18783 316.18783 208511.45 208511.45 9.8749351 9.8749351 Loop time of 28.9817 on 1 procs for 1000 steps with 2000 atoms Performance: 2.981 ns/day, 8.050 hours/ns, 34.505 timesteps/s 66.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.546 | 28.546 | 28.546 | 0.0 | 98.50 Neigh | 0.2011 | 0.2011 | 0.2011 | 0.0 | 0.69 Comm | 0.070279 | 0.070279 | 0.070279 | 0.0 | 0.24 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.13064 | 0.13064 | 0.13064 | 0.0 | 0.45 Other | | 0.03367 | | | 0.12 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8592 ave 8592 max 8592 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 788572 ave 788572 max 788572 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 788572 Ave neighs/atom = 394.286 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 208518.753253085 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0