# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.7913857132196505*${_u_distance} variable latticeconst_converted equal 5.7913857132196505*1 lattice bcc ${latticeconst_converted} lattice bcc 5.79138571321965 Lattice spacing in x,y,z = 5.79139 5.79139 5.79139 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (57.9139 57.9139 57.9139) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms create_atoms CPU = 0.000632048 secs variable mass_converted equal 85.4678*${_u_mass} variable mass_converted equal 85.4678*1 kim_interactions Rb #=== BEGIN kim_interactions ================================== pair_style kim Morse_Shifted_GirifalcoWeizer_1959LowCutoff_Rb__MO_754498969542_004 pair_coeff * * Rb #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 85.4678 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 194243.936722195 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 194243.936722195/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 194243.936722195/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 194243.936722195/(1*1*${_u_distance}) variable V0_metal equal 194243.936722195/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 194243.936722195*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 194243.936722195 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 333.15*${_u_temperature} variable temp_converted equal 333.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 333.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "333.15 - 0.2" variable T_up equal "333.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 21.5283 ghost atom cutoff = 21.5283 binsize = 10.7642, bins = 6 6 6 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 21.5283 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 6.659 | 6.659 | 6.659 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -1477.306 -1477.306 -1563.389 -1563.389 333.15 333.15 194243.94 194243.94 473.35664 473.35664 1000 -1363.257 -1363.257 -1451.9509 -1451.9509 343.25435 343.25435 212502.89 212502.89 -111.30145 -111.30145 Loop time of 41.2367 on 1 procs for 1000 steps with 2000 atoms Performance: 2.095 ns/day, 11.455 hours/ns, 24.250 timesteps/s 69.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.513 | 40.513 | 40.513 | 0.0 | 98.24 Neigh | 0.32142 | 0.32142 | 0.32142 | 0.0 | 0.78 Comm | 0.14366 | 0.14366 | 0.14366 | 0.0 | 0.35 Output | 4.4107e-05 | 4.4107e-05 | 4.4107e-05 | 0.0 | 0.00 Modify | 0.24132 | 0.24132 | 0.24132 | 0.0 | 0.59 Other | | 0.01734 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8508 ave 8508 max 8508 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 776540 ave 776540 max 776540 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 776540 Ave neighs/atom = 388.27 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -1363.257 -1363.257 -1451.9509 -1451.9509 343.25435 343.25435 212502.89 212502.89 -111.30145 -111.30145 2000 -1368.6512 -1368.6512 -1457.7151 -1457.7151 344.68667 344.68667 209944.35 209944.35 34.770894 34.770894 Loop time of 39.0648 on 1 procs for 1000 steps with 2000 atoms Performance: 2.212 ns/day, 10.851 hours/ns, 25.598 timesteps/s 71.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.482 | 38.482 | 38.482 | 0.0 | 98.51 Neigh | 0.25659 | 0.25659 | 0.25659 | 0.0 | 0.66 Comm | 0.084542 | 0.084542 | 0.084542 | 0.0 | 0.22 Output | 5.1022e-05 | 5.1022e-05 | 5.1022e-05 | 0.0 | 0.00 Modify | 0.22385 | 0.22385 | 0.22385 | 0.0 | 0.57 Other | | 0.01728 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8453 ave 8453 max 8453 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 787124 ave 787124 max 787124 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 787124 Ave neighs/atom = 393.562 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -1368.6512 -1368.6512 -1457.7151 -1457.7151 344.68667 344.68667 209944.35 209944.35 34.770894 34.770894 3000 -1378.4923 -1378.4923 -1462.8475 -1462.8475 326.46348 326.46348 209576.53 209576.53 2.0890539 2.0890539 Loop time of 36.559 on 1 procs for 1000 steps with 2000 atoms Performance: 2.363 ns/day, 10.155 hours/ns, 27.353 timesteps/s 77.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.991 | 35.991 | 35.991 | 0.0 | 98.45 Neigh | 0.28756 | 0.28756 | 0.28756 | 0.0 | 0.79 Comm | 0.13198 | 0.13198 | 0.13198 | 0.0 | 0.36 Output | 5.3167e-05 | 5.3167e-05 | 5.3167e-05 | 0.0 | 0.00 Modify | 0.11797 | 0.11797 | 0.11797 | 0.0 | 0.32 Other | | 0.03055 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8504 ave 8504 max 8504 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 784658 ave 784658 max 784658 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 784658 Ave neighs/atom = 392.329 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -1378.4923 -1378.4923 -1462.8475 -1462.8475 326.46348 326.46348 209576.53 209576.53 2.0890539 2.0890539 4000 -1381.0299 -1381.0299 -1464.2281 -1464.2281 321.98563 321.98563 210290.73 210290.73 -63.677766 -63.677766 Loop time of 44.943 on 1 procs for 1000 steps with 2000 atoms Performance: 1.922 ns/day, 12.484 hours/ns, 22.250 timesteps/s 63.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.35 | 44.35 | 44.35 | 0.0 | 98.68 Neigh | 0.27391 | 0.27391 | 0.27391 | 0.0 | 0.61 Comm | 0.10132 | 0.10132 | 0.10132 | 0.0 | 0.23 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.20041 | 0.20041 | 0.20041 | 0.0 | 0.45 Other | | 0.01731 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8519 ave 8519 max 8519 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 782300 ave 782300 max 782300 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 782300 Ave neighs/atom = 391.15 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -1381.0299 -1381.0299 -1464.2281 -1464.2281 321.98563 321.98563 210290.73 210290.73 -63.677766 -63.677766 5000 -1374.9525 -1374.9525 -1463.6329 -1463.6329 343.20218 343.20218 209045.36 209045.36 54.297286 54.297286 Loop time of 38.4129 on 1 procs for 1000 steps with 2000 atoms Performance: 2.249 ns/day, 10.670 hours/ns, 26.033 timesteps/s 75.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.787 | 37.787 | 37.787 | 0.0 | 98.37 Neigh | 0.31752 | 0.31752 | 0.31752 | 0.0 | 0.83 Comm | 0.13277 | 0.13277 | 0.13277 | 0.0 | 0.35 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.14524 | 0.14524 | 0.14524 | 0.0 | 0.38 Other | | 0.03062 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8561 ave 8561 max 8561 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 788784 ave 788784 max 788784 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 788784 Ave neighs/atom = 394.392 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 339.374475139746, Press = 70.5386528855372 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -1374.9525 -1374.9525 -1463.6329 -1463.6329 343.20218 343.20218 209045.36 209045.36 54.297286 54.297286 6000 -1374.8862 -1374.8862 -1461.052 -1461.052 333.47065 333.47065 210128.13 210128.13 -18.451935 -18.451935 Loop time of 40.216 on 1 procs for 1000 steps with 2000 atoms Performance: 2.148 ns/day, 11.171 hours/ns, 24.866 timesteps/s 69.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.584 | 39.584 | 39.584 | 0.0 | 98.43 Neigh | 0.29533 | 0.29533 | 0.29533 | 0.0 | 0.73 Comm | 0.14676 | 0.14676 | 0.14676 | 0.0 | 0.36 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.17261 | 0.17261 | 0.17261 | 0.0 | 0.43 Other | | 0.01722 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8543 ave 8543 max 8543 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 782570 ave 782570 max 782570 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 782570 Ave neighs/atom = 391.285 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.073380787846, Press = -1.44284985102655 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -1374.8862 -1374.8862 -1461.052 -1461.052 333.47065 333.47065 210128.13 210128.13 -18.451935 -18.451935 7000 -1377.8454 -1377.8454 -1466.1163 -1466.1163 341.61771 341.61771 209711.87 209711.87 -19.392329 -19.392329 Loop time of 38.1905 on 1 procs for 1000 steps with 2000 atoms Performance: 2.262 ns/day, 10.608 hours/ns, 26.185 timesteps/s 74.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.563 | 37.563 | 37.563 | 0.0 | 98.36 Neigh | 0.3422 | 0.3422 | 0.3422 | 0.0 | 0.90 Comm | 0.075025 | 0.075025 | 0.075025 | 0.0 | 0.20 Output | 3.0041e-05 | 3.0041e-05 | 3.0041e-05 | 0.0 | 0.00 Modify | 0.19308 | 0.19308 | 0.19308 | 0.0 | 0.51 Other | | 0.01747 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8571 ave 8571 max 8571 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 785308 ave 785308 max 785308 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 785308 Ave neighs/atom = 392.654 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.346654587799, Press = 1.73500112415459 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -1377.8454 -1377.8454 -1466.1163 -1466.1163 341.61771 341.61771 209711.87 209711.87 -19.392329 -19.392329 8000 -1380.0792 -1380.0792 -1464.8473 -1464.8473 328.06125 328.06125 208375.17 208375.17 76.351212 76.351212 Loop time of 37.5597 on 1 procs for 1000 steps with 2000 atoms Performance: 2.300 ns/day, 10.433 hours/ns, 26.624 timesteps/s 76.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 36.993 | 36.993 | 36.993 | 0.0 | 98.49 Neigh | 0.29064 | 0.29064 | 0.29064 | 0.0 | 0.77 Comm | 0.08876 | 0.08876 | 0.08876 | 0.0 | 0.24 Output | 4.0054e-05 | 4.0054e-05 | 4.0054e-05 | 0.0 | 0.00 Modify | 0.15681 | 0.15681 | 0.15681 | 0.0 | 0.42 Other | | 0.03042 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8590 ave 8590 max 8590 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 789694 ave 789694 max 789694 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 789694 Ave neighs/atom = 394.847 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.911188109873, Press = 2.06183741085758 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -1380.0792 -1380.0792 -1464.8473 -1464.8473 328.06125 328.06125 208375.17 208375.17 76.351212 76.351212 9000 -1378.2111 -1378.2111 -1463.9375 -1463.9375 331.77017 331.77017 209917.13 209917.13 -26.460392 -26.460392 Loop time of 40.0853 on 1 procs for 1000 steps with 2000 atoms Performance: 2.155 ns/day, 11.135 hours/ns, 24.947 timesteps/s 70.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.453 | 39.453 | 39.453 | 0.0 | 98.42 Neigh | 0.39644 | 0.39644 | 0.39644 | 0.0 | 0.99 Comm | 0.087476 | 0.087476 | 0.087476 | 0.0 | 0.22 Output | 4.0054e-05 | 4.0054e-05 | 4.0054e-05 | 0.0 | 0.00 Modify | 0.13138 | 0.13138 | 0.13138 | 0.0 | 0.33 Other | | 0.01748 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8539 ave 8539 max 8539 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 782134 ave 782134 max 782134 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 782134 Ave neighs/atom = 391.067 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.729973078966, Press = -2.11381499704946 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -1378.2111 -1378.2111 -1463.9375 -1463.9375 331.77017 331.77017 209917.13 209917.13 -26.460392 -26.460392 10000 -1372.8428 -1372.8428 -1460.4095 -1460.4095 338.89227 338.89227 210770.46 210770.46 -52.964108 -52.964108 Loop time of 38.4247 on 1 procs for 1000 steps with 2000 atoms Performance: 2.249 ns/day, 10.674 hours/ns, 26.025 timesteps/s 73.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.72 | 37.72 | 37.72 | 0.0 | 98.17 Neigh | 0.41874 | 0.41874 | 0.41874 | 0.0 | 1.09 Comm | 0.097424 | 0.097424 | 0.097424 | 0.0 | 0.25 Output | 9.2983e-05 | 9.2983e-05 | 9.2983e-05 | 0.0 | 0.00 Modify | 0.17123 | 0.17123 | 0.17123 | 0.0 | 0.45 Other | | 0.01739 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8533 ave 8533 max 8533 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 785058 ave 785058 max 785058 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 785058 Ave neighs/atom = 392.529 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.842048848696, Press = 2.48251834375766 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -1372.8428 -1372.8428 -1460.4095 -1460.4095 338.89227 338.89227 210770.46 210770.46 -52.964108 -52.964108 11000 -1379.1793 -1379.1793 -1464.259 -1464.259 329.26727 329.26727 208919.96 208919.96 43.893377 43.893377 Loop time of 37.9114 on 1 procs for 1000 steps with 2000 atoms Performance: 2.279 ns/day, 10.531 hours/ns, 26.377 timesteps/s 76.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.198 | 37.198 | 37.198 | 0.0 | 98.12 Neigh | 0.41114 | 0.41114 | 0.41114 | 0.0 | 1.08 Comm | 0.086753 | 0.086753 | 0.086753 | 0.0 | 0.23 Output | 4.0054e-05 | 4.0054e-05 | 4.0054e-05 | 0.0 | 0.00 Modify | 0.16585 | 0.16585 | 0.16585 | 0.0 | 0.44 Other | | 0.04995 | | | 0.13 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8558 ave 8558 max 8558 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 785000 ave 785000 max 785000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 785000 Ave neighs/atom = 392.5 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.989969871276, Press = -0.37244285849805 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -1379.1793 -1379.1793 -1464.259 -1464.259 329.26727 329.26727 208919.96 208919.96 43.893377 43.893377 12000 -1379.1411 -1379.1411 -1464.9342 -1464.9342 332.02805 332.02805 209626.43 209626.43 -18.210226 -18.210226 Loop time of 37.3296 on 1 procs for 1000 steps with 2000 atoms Performance: 2.315 ns/day, 10.369 hours/ns, 26.788 timesteps/s 76.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 36.803 | 36.803 | 36.803 | 0.0 | 98.59 Neigh | 0.30691 | 0.30691 | 0.30691 | 0.0 | 0.82 Comm | 0.077081 | 0.077081 | 0.077081 | 0.0 | 0.21 Output | 3.7909e-05 | 3.7909e-05 | 3.7909e-05 | 0.0 | 0.00 Modify | 0.12451 | 0.12451 | 0.12451 | 0.0 | 0.33 Other | | 0.01794 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8561 ave 8561 max 8561 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 786184 ave 786184 max 786184 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 786184 Ave neighs/atom = 393.092 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.889263196081, Press = 0.44923458936392 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -1379.1411 -1379.1411 -1464.9342 -1464.9342 332.02805 332.02805 209626.43 209626.43 -18.210226 -18.210226 13000 -1378.7586 -1378.7586 -1463.6076 -1463.6076 328.37413 328.37413 209493.13 209493.13 1.542222 1.542222 Loop time of 35.0054 on 1 procs for 1000 steps with 2000 atoms Performance: 2.468 ns/day, 9.724 hours/ns, 28.567 timesteps/s 81.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 34.399 | 34.399 | 34.399 | 0.0 | 98.27 Neigh | 0.30819 | 0.30819 | 0.30819 | 0.0 | 0.88 Comm | 0.08597 | 0.08597 | 0.08597 | 0.0 | 0.25 Output | 5.8889e-05 | 5.8889e-05 | 5.8889e-05 | 0.0 | 0.00 Modify | 0.19409 | 0.19409 | 0.19409 | 0.0 | 0.55 Other | | 0.01772 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8557 ave 8557 max 8557 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 784880 ave 784880 max 784880 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 784880 Ave neighs/atom = 392.44 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.763836999237, Press = -0.176800965422802 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -1378.7586 -1378.7586 -1463.6076 -1463.6076 328.37413 328.37413 209493.13 209493.13 1.542222 1.542222 14000 -1377.0354 -1377.0354 -1465.1813 -1465.1813 341.13372 341.13372 209012.76 209012.76 39.082244 39.082244 Loop time of 33.4765 on 1 procs for 1000 steps with 2000 atoms Performance: 2.581 ns/day, 9.299 hours/ns, 29.872 timesteps/s 85.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 32.965 | 32.965 | 32.965 | 0.0 | 98.47 Neigh | 0.24422 | 0.24422 | 0.24422 | 0.0 | 0.73 Comm | 0.086227 | 0.086227 | 0.086227 | 0.0 | 0.26 Output | 5.3883e-05 | 5.3883e-05 | 5.3883e-05 | 0.0 | 0.00 Modify | 0.16311 | 0.16311 | 0.16311 | 0.0 | 0.49 Other | | 0.01769 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8560 ave 8560 max 8560 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 785202 ave 785202 max 785202 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 785202 Ave neighs/atom = 392.601 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.698532011861, Press = -0.0736251496738741 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -1377.0354 -1377.0354 -1465.1813 -1465.1813 341.13372 341.13372 209012.76 209012.76 39.082244 39.082244 15000 -1376.2789 -1376.2789 -1463.9881 -1463.9881 339.44358 339.44358 209819.91 209819.91 -9.2124229 -9.2124229 Loop time of 37.8448 on 1 procs for 1000 steps with 2000 atoms Performance: 2.283 ns/day, 10.512 hours/ns, 26.424 timesteps/s 75.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.285 | 37.285 | 37.285 | 0.0 | 98.52 Neigh | 0.30713 | 0.30713 | 0.30713 | 0.0 | 0.81 Comm | 0.086158 | 0.086158 | 0.086158 | 0.0 | 0.23 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.14846 | 0.14846 | 0.14846 | 0.0 | 0.39 Other | | 0.01767 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8535 ave 8535 max 8535 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 782788 ave 782788 max 782788 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 782788 Ave neighs/atom = 391.394 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.728848873687, Press = -0.315060375762838 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -1376.2789 -1376.2789 -1463.9881 -1463.9881 339.44358 339.44358 209819.91 209819.91 -9.2124229 -9.2124229 16000 -1378.1905 -1378.1905 -1464.0362 -1464.0362 332.23149 332.23149 209075.62 209075.62 34.304478 34.304478 Loop time of 33.3337 on 1 procs for 1000 steps with 2000 atoms Performance: 2.592 ns/day, 9.259 hours/ns, 30.000 timesteps/s 84.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 32.868 | 32.868 | 32.868 | 0.0 | 98.60 Neigh | 0.23457 | 0.23457 | 0.23457 | 0.0 | 0.70 Comm | 0.074987 | 0.074987 | 0.074987 | 0.0 | 0.22 Output | 3.0994e-05 | 3.0994e-05 | 3.0994e-05 | 0.0 | 0.00 Modify | 0.13829 | 0.13829 | 0.13829 | 0.0 | 0.41 Other | | 0.01745 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8545 ave 8545 max 8545 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 784960 ave 784960 max 784960 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 784960 Ave neighs/atom = 392.48 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.670720538213, Press = -0.258913049377886 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -1378.1905 -1378.1905 -1464.0362 -1464.0362 332.23149 332.23149 209075.62 209075.62 34.304478 34.304478 17000 -1373.1675 -1373.1675 -1462.022 -1462.022 343.87638 343.87638 210974.92 210974.92 -73.856982 -73.856982 Loop time of 33.2931 on 1 procs for 1000 steps with 2000 atoms Performance: 2.595 ns/day, 9.248 hours/ns, 30.036 timesteps/s 85.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 32.705 | 32.705 | 32.705 | 0.0 | 98.23 Neigh | 0.28339 | 0.28339 | 0.28339 | 0.0 | 0.85 Comm | 0.086404 | 0.086404 | 0.086404 | 0.0 | 0.26 Output | 4.1008e-05 | 4.1008e-05 | 4.1008e-05 | 0.0 | 0.00 Modify | 0.18742 | 0.18742 | 0.18742 | 0.0 | 0.56 Other | | 0.03082 | | | 0.09 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8507 ave 8507 max 8507 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 782494 ave 782494 max 782494 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 782494 Ave neighs/atom = 391.247 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.830718923602, Press = 0.564374659259357 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -1373.1675 -1373.1675 -1462.022 -1462.022 343.87638 343.87638 210974.92 210974.92 -73.856982 -73.856982 18000 -1372.4096 -1372.4096 -1461.2462 -1461.2462 343.807 343.807 208410.04 208410.04 118.91354 118.91354 Loop time of 33.8468 on 1 procs for 1000 steps with 2000 atoms Performance: 2.553 ns/day, 9.402 hours/ns, 29.545 timesteps/s 84.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.278 | 33.278 | 33.278 | 0.0 | 98.32 Neigh | 0.31767 | 0.31767 | 0.31767 | 0.0 | 0.94 Comm | 0.073439 | 0.073439 | 0.073439 | 0.0 | 0.22 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.15172 | 0.15172 | 0.15172 | 0.0 | 0.45 Other | | 0.02573 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8593 ave 8593 max 8593 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 790586 ave 790586 max 790586 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 790586 Ave neighs/atom = 395.293 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.997638731251, Press = 0.414836914409626 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -1372.4096 -1372.4096 -1461.2462 -1461.2462 343.807 343.807 208410.04 208410.04 118.91354 118.91354 19000 -1380.0586 -1380.0586 -1466.4707 -1466.4707 334.42391 334.42391 209420.7 209420.7 -9.114027 -9.114027 Loop time of 31.7905 on 1 procs for 1000 steps with 2000 atoms Performance: 2.718 ns/day, 8.831 hours/ns, 31.456 timesteps/s 90.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.285 | 31.285 | 31.285 | 0.0 | 98.41 Neigh | 0.27602 | 0.27602 | 0.27602 | 0.0 | 0.87 Comm | 0.074239 | 0.074239 | 0.074239 | 0.0 | 0.23 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.13634 | 0.13634 | 0.13634 | 0.0 | 0.43 Other | | 0.0185 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8566 ave 8566 max 8566 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 783076 ave 783076 max 783076 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 783076 Ave neighs/atom = 391.538 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.004876841831, Press = -0.401830667158621 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -1380.0586 -1380.0586 -1466.4707 -1466.4707 334.42391 334.42391 209420.7 209420.7 -9.114027 -9.114027 20000 -1380.5928 -1380.5928 -1466.4517 -1466.4517 332.28271 332.28271 210024.8 210024.8 -53.693398 -53.693398 Loop time of 34.2839 on 1 procs for 1000 steps with 2000 atoms Performance: 2.520 ns/day, 9.523 hours/ns, 29.168 timesteps/s 82.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.753 | 33.753 | 33.753 | 0.0 | 98.45 Neigh | 0.25247 | 0.25247 | 0.25247 | 0.0 | 0.74 Comm | 0.085804 | 0.085804 | 0.085804 | 0.0 | 0.25 Output | 3.2187e-05 | 3.2187e-05 | 3.2187e-05 | 0.0 | 0.00 Modify | 0.17473 | 0.17473 | 0.17473 | 0.0 | 0.51 Other | | 0.01739 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8583 ave 8583 max 8583 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 788272 ave 788272 max 788272 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 788272 Ave neighs/atom = 394.136 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.10247969981, Press = 0.455128936749897 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.664 | 6.664 | 6.664 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -1380.5928 -1380.5928 -1466.4517 -1466.4517 332.28271 332.28271 210024.8 210024.8 -53.693398 -53.693398 21000 -1379.3084 -1379.3084 -1464.7041 -1464.7041 330.49029 330.49029 207847.72 207847.72 115.92072 115.92072 Loop time of 34.2773 on 1 procs for 1000 steps with 2000 atoms Performance: 2.521 ns/day, 9.521 hours/ns, 29.174 timesteps/s 83.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.762 | 33.762 | 33.762 | 0.0 | 98.50 Neigh | 0.27013 | 0.27013 | 0.27013 | 0.0 | 0.79 Comm | 0.075882 | 0.075882 | 0.075882 | 0.0 | 0.22 Output | 3.7909e-05 | 3.7909e-05 | 3.7909e-05 | 0.0 | 0.00 Modify | 0.15116 | 0.15116 | 0.15116 | 0.0 | 0.44 Other | | 0.01785 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8561 ave 8561 max 8561 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 789622 ave 789622 max 789622 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 789622 Ave neighs/atom = 394.811 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T333.15.out" else "print 'not_converged' file output/vol_T333.15.out" print '${V}' file output/vol_T333.15.out 209609.649073107 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0