# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.58500038087368*${_u_distance} variable latticeconst_converted equal 5.58500038087368*1 lattice bcc ${latticeconst_converted} lattice bcc 5.58500038087368 Lattice spacing in x,y,z = 5.585 5.585 5.585 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (55.85 55.85 55.85) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms create_atoms CPU = 0.00022006 secs variable mass_converted equal 85.4678*${_u_mass} variable mass_converted equal 85.4678*1 # specify which KIM Model to use pair_style kim EAM_Dynamo_NicholAckland_2016v2_Rb__MO_874930365376_000 pair_coeff * * Rb mass 1 ${mass_converted} mass 1 85.4678 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 174208.612265895 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 174208.612265895/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 174208.612265895/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 174208.612265895/(1*1*${_u_distance}) variable V0_metal equal 174208.612265895/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 174208.612265895*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 174208.612265895 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 9.2605 ghost atom cutoff = 9.2605 binsize = 4.63025, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 9.2605 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -1604.2521 -1604.2521 -1679.9995 -1679.9995 293.15 293.15 174208.61 174208.61 464.42594 464.42594 1000 -1508.8526 -1508.8526 -1584.9564 -1584.9564 294.52954 294.52954 181631.46 181631.46 222.53471 222.53471 Loop time of 4.13199 on 1 procs for 1000 steps with 2000 atoms Performance: 20.910 ns/day, 1.148 hours/ns, 242.014 timesteps/s 44.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 3.8051 | 3.8051 | 3.8051 | 0.0 | 92.09 Neigh | 0.044257 | 0.044257 | 0.044257 | 0.0 | 1.07 Comm | 0.018378 | 0.018378 | 0.018378 | 0.0 | 0.44 Output | 3.7909e-05 | 3.7909e-05 | 3.7909e-05 | 0.0 | 0.00 Modify | 0.25494 | 0.25494 | 0.25494 | 0.0 | 6.17 Other | | 0.009282 | | | 0.22 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2890 ave 2890 max 2890 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 73112 ave 73112 max 73112 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 73112 Ave neighs/atom = 36.556 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -1508.8526 -1508.8526 -1584.9564 -1584.9564 294.52954 294.52954 181631.46 181631.46 222.53471 222.53471 2000 -1528.1474 -1528.1474 -1601.3635 -1601.3635 283.35413 283.35413 181893.42 181893.42 -21.709647 -21.709647 Loop time of 4.57545 on 1 procs for 1000 steps with 2000 atoms Performance: 18.883 ns/day, 1.271 hours/ns, 218.558 timesteps/s 42.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 4.2811 | 4.2811 | 4.2811 | 0.0 | 93.57 Neigh | 0.065822 | 0.065822 | 0.065822 | 0.0 | 1.44 Comm | 0.018523 | 0.018523 | 0.018523 | 0.0 | 0.40 Output | 3.0041e-05 | 3.0041e-05 | 3.0041e-05 | 0.0 | 0.00 Modify | 0.20043 | 0.20043 | 0.20043 | 0.0 | 4.38 Other | | 0.009503 | | | 0.21 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2880 ave 2880 max 2880 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 72348 ave 72348 max 72348 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 72348 Ave neighs/atom = 36.174 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -1528.1474 -1528.1474 -1601.3635 -1601.3635 283.35413 283.35413 181893.42 181893.42 -21.709647 -21.709647 3000 -1522.7004 -1522.7004 -1597.3506 -1597.3506 288.90431 288.90431 182322.8 182322.8 -45.3222 -45.3222 Loop time of 4.26483 on 1 procs for 1000 steps with 2000 atoms Performance: 20.259 ns/day, 1.185 hours/ns, 234.476 timesteps/s 44.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 3.9639 | 3.9639 | 3.9639 | 0.0 | 92.94 Neigh | 0.040409 | 0.040409 | 0.040409 | 0.0 | 0.95 Comm | 0.028374 | 0.028374 | 0.028374 | 0.0 | 0.67 Output | 3.0994e-05 | 3.0994e-05 | 3.0994e-05 | 0.0 | 0.00 Modify | 0.20257 | 0.20257 | 0.20257 | 0.0 | 4.75 Other | | 0.02954 | | | 0.69 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2897 ave 2897 max 2897 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 71728 ave 71728 max 71728 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 71728 Ave neighs/atom = 35.864 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -1522.7004 -1522.7004 -1597.3506 -1597.3506 288.90431 288.90431 182322.8 182322.8 -45.3222 -45.3222 4000 -1524.8593 -1524.8593 -1600.0972 -1600.0972 291.17862 291.17862 181593.89 181593.89 73.782314 73.782314 Loop time of 4.26039 on 1 procs for 1000 steps with 2000 atoms Performance: 20.280 ns/day, 1.183 hours/ns, 234.721 timesteps/s 44.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 3.9214 | 3.9214 | 3.9214 | 0.0 | 92.04 Neigh | 0.051764 | 0.051764 | 0.051764 | 0.0 | 1.22 Comm | 0.058314 | 0.058314 | 0.058314 | 0.0 | 1.37 Output | 3.8862e-05 | 3.8862e-05 | 3.8862e-05 | 0.0 | 0.00 Modify | 0.21939 | 0.21939 | 0.21939 | 0.0 | 5.15 Other | | 0.009439 | | | 0.22 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2892 ave 2892 max 2892 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 71430 ave 71430 max 71430 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 71430 Ave neighs/atom = 35.715 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -1524.8593 -1524.8593 -1600.0972 -1600.0972 291.17862 291.17862 181593.89 181593.89 73.782314 73.782314 5000 -1521.0427 -1521.0427 -1597.6548 -1597.6548 296.4967 296.4967 182084.98 182084.98 28.82141 28.82141 Loop time of 4.25038 on 1 procs for 1000 steps with 2000 atoms Performance: 20.328 ns/day, 1.181 hours/ns, 235.273 timesteps/s 44.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 3.9203 | 3.9203 | 3.9203 | 0.0 | 92.23 Neigh | 0.061943 | 0.061943 | 0.061943 | 0.0 | 1.46 Comm | 0.038504 | 0.038504 | 0.038504 | 0.0 | 0.91 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.21992 | 0.21992 | 0.21992 | 0.0 | 5.17 Other | | 0.009699 | | | 0.23 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2901 ave 2901 max 2901 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 71982 ave 71982 max 71982 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 71982 Ave neighs/atom = 35.991 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 294.675556215663, Press = 36.8092680225904 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -1521.0427 -1521.0427 -1597.6548 -1597.6548 296.4967 296.4967 182084.98 182084.98 28.82141 28.82141 6000 -1523.3749 -1523.3749 -1597.9538 -1597.9538 288.62793 288.62793 182346.93 182346.93 -28.138289 -28.138289 Loop time of 4.4376 on 1 procs for 1000 steps with 2000 atoms Performance: 19.470 ns/day, 1.233 hours/ns, 225.347 timesteps/s 43.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 4.1843 | 4.1843 | 4.1843 | 0.0 | 94.29 Neigh | 0.052659 | 0.052659 | 0.052659 | 0.0 | 1.19 Comm | 0.03844 | 0.03844 | 0.03844 | 0.0 | 0.87 Output | 2.0981e-05 | 2.0981e-05 | 2.0981e-05 | 0.0 | 0.00 Modify | 0.1527 | 0.1527 | 0.1527 | 0.0 | 3.44 Other | | 0.009468 | | | 0.21 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2890 ave 2890 max 2890 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 72096 ave 72096 max 72096 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 72096 Ave neighs/atom = 36.048 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.693465204993, Press = 5.00179861355934 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -1523.3749 -1523.3749 -1597.9538 -1597.9538 288.62793 288.62793 182346.93 182346.93 -28.138289 -28.138289 7000 -1523.7063 -1523.7063 -1600.0019 -1600.0019 295.27182 295.27182 182514.21 182514.21 -62.984451 -62.984451 Loop time of 4.01746 on 1 procs for 1000 steps with 2000 atoms Performance: 21.506 ns/day, 1.116 hours/ns, 248.913 timesteps/s 47.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 3.793 | 3.793 | 3.793 | 0.0 | 94.41 Neigh | 0.022735 | 0.022735 | 0.022735 | 0.0 | 0.57 Comm | 0.058418 | 0.058418 | 0.058418 | 0.0 | 1.45 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.13385 | 0.13385 | 0.13385 | 0.0 | 3.33 Other | | 0.009396 | | | 0.23 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2889 ave 2889 max 2889 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 71464 ave 71464 max 71464 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 71464 Ave neighs/atom = 35.732 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.72362691107, Press = -2.45325219452539 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -1523.7063 -1523.7063 -1600.0019 -1600.0019 295.27182 295.27182 182514.21 182514.21 -62.984451 -62.984451 8000 -1526.3726 -1526.3726 -1600.7124 -1600.7124 287.70274 287.70274 181697.72 181697.72 70.188699 70.188699 Loop time of 4.14043 on 1 procs for 1000 steps with 2000 atoms Performance: 20.867 ns/day, 1.150 hours/ns, 241.521 timesteps/s 46.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 3.9286 | 3.9286 | 3.9286 | 0.0 | 94.88 Neigh | 0.021178 | 0.021178 | 0.021178 | 0.0 | 0.51 Comm | 0.018335 | 0.018335 | 0.018335 | 0.0 | 0.44 Output | 2.2173e-05 | 2.2173e-05 | 2.2173e-05 | 0.0 | 0.00 Modify | 0.14279 | 0.14279 | 0.14279 | 0.0 | 3.45 Other | | 0.0295 | | | 0.71 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2893 ave 2893 max 2893 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 71996 ave 71996 max 71996 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 71996 Ave neighs/atom = 35.998 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.889026396605, Press = -0.569272529741157 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -1526.3726 -1526.3726 -1600.7124 -1600.7124 287.70274 287.70274 181697.72 181697.72 70.188699 70.188699 9000 -1518.2503 -1518.2503 -1596.2634 -1596.2634 301.91896 301.91896 181977.3 181977.3 79.64009 79.64009 Loop time of 4.35537 on 1 procs for 1000 steps with 2000 atoms Performance: 19.838 ns/day, 1.210 hours/ns, 229.601 timesteps/s 44.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 4.0594 | 4.0594 | 4.0594 | 0.0 | 93.20 Neigh | 0.022906 | 0.022906 | 0.022906 | 0.0 | 0.53 Comm | 0.038729 | 0.038729 | 0.038729 | 0.0 | 0.89 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.22459 | 0.22459 | 0.22459 | 0.0 | 5.16 Other | | 0.009698 | | | 0.22 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2859 ave 2859 max 2859 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 72200 ave 72200 max 72200 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 72200 Ave neighs/atom = 36.1 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.582266778648, Press = 0.902543144896207 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -1518.2503 -1518.2503 -1596.2634 -1596.2634 301.91896 301.91896 181977.3 181977.3 79.64009 79.64009 10000 -1524.934 -1524.934 -1601.0955 -1601.0955 294.75263 294.75263 181866.84 181866.84 18.301565 18.301565 Loop time of 4.53486 on 1 procs for 1000 steps with 2000 atoms Performance: 19.052 ns/day, 1.260 hours/ns, 220.514 timesteps/s 42.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 4.172 | 4.172 | 4.172 | 0.0 | 92.00 Neigh | 0.062312 | 0.062312 | 0.062312 | 0.0 | 1.37 Comm | 0.01845 | 0.01845 | 0.01845 | 0.0 | 0.41 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.25262 | 0.25262 | 0.25262 | 0.0 | 5.57 Other | | 0.0294 | | | 0.65 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2899 ave 2899 max 2899 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 72392 ave 72392 max 72392 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 72392 Ave neighs/atom = 36.196 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.420039575294, Press = 1.97697772623134 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -1524.934 -1524.934 -1601.0955 -1601.0955 294.75263 294.75263 181866.84 181866.84 18.301565 18.301565 11000 -1519.1692 -1519.1692 -1594.3329 -1594.3329 290.89146 290.89146 183003.71 183003.71 -101.76009 -101.76009 Loop time of 4.15355 on 1 procs for 1000 steps with 2000 atoms Performance: 20.801 ns/day, 1.154 hours/ns, 240.758 timesteps/s 46.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 3.8 | 3.8 | 3.8 | 0.0 | 91.49 Neigh | 0.10276 | 0.10276 | 0.10276 | 0.0 | 2.47 Comm | 0.038453 | 0.038453 | 0.038453 | 0.0 | 0.93 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.18276 | 0.18276 | 0.18276 | 0.0 | 4.40 Other | | 0.02958 | | | 0.71 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2878 ave 2878 max 2878 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 72124 ave 72124 max 72124 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 72124 Ave neighs/atom = 36.062 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.373313859098, Press = 0.796243524980675 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -1519.1692 -1519.1692 -1594.3329 -1594.3329 290.89146 290.89146 183003.71 183003.71 -101.76009 -101.76009 12000 -1526.8845 -1526.8845 -1601.7663 -1601.7663 289.80024 289.80024 182686.24 182686.24 -110.53751 -110.53751 Loop time of 4.0803 on 1 procs for 1000 steps with 2000 atoms Performance: 21.175 ns/day, 1.133 hours/ns, 245.080 timesteps/s 47.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 3.8534 | 3.8534 | 3.8534 | 0.0 | 94.44 Neigh | 0.022091 | 0.022091 | 0.022091 | 0.0 | 0.54 Comm | 0.051938 | 0.051938 | 0.051938 | 0.0 | 1.27 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.14331 | 0.14331 | 0.14331 | 0.0 | 3.51 Other | | 0.009489 | | | 0.23 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2881 ave 2881 max 2881 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 71638 ave 71638 max 71638 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 71638 Ave neighs/atom = 35.819 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.574648005131, Press = -0.489646366289389 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -1526.8845 -1526.8845 -1601.7663 -1601.7663 289.80024 289.80024 182686.24 182686.24 -110.53751 -110.53751 13000 -1518.6662 -1518.6662 -1596.7325 -1596.7325 302.12474 302.12474 181936.46 181936.46 46.775916 46.775916 Loop time of 3.84475 on 1 procs for 1000 steps with 2000 atoms Performance: 22.472 ns/day, 1.068 hours/ns, 260.095 timesteps/s 49.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 3.6215 | 3.6215 | 3.6215 | 0.0 | 94.19 Neigh | 0.021922 | 0.021922 | 0.021922 | 0.0 | 0.57 Comm | 0.018241 | 0.018241 | 0.018241 | 0.0 | 0.47 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.17355 | 0.17355 | 0.17355 | 0.0 | 4.51 Other | | 0.009543 | | | 0.25 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2871 ave 2871 max 2871 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 71946 ave 71946 max 71946 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 71946 Ave neighs/atom = 35.973 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.617206305086, Press = -0.971428184660757 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -1518.6662 -1518.6662 -1596.7325 -1596.7325 302.12474 302.12474 181936.46 181936.46 46.775916 46.775916 14000 -1520.8151 -1520.8151 -1597.0605 -1597.0605 295.07754 295.07754 181425.77 181425.77 130.49309 130.49309 Loop time of 3.74723 on 1 procs for 1000 steps with 2000 atoms Performance: 23.057 ns/day, 1.041 hours/ns, 266.864 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 3.3324 | 3.3324 | 3.3324 | 0.0 | 88.93 Neigh | 0.080656 | 0.080656 | 0.080656 | 0.0 | 2.15 Comm | 0.05218 | 0.05218 | 0.05218 | 0.0 | 1.39 Output | 2.718e-05 | 2.718e-05 | 2.718e-05 | 0.0 | 0.00 Modify | 0.21275 | 0.21275 | 0.21275 | 0.0 | 5.68 Other | | 0.06924 | | | 1.85 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2878 ave 2878 max 2878 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 72092 ave 72092 max 72092 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 72092 Ave neighs/atom = 36.046 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.603365917227, Press = 0.570076244581217 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -1520.8151 -1520.8151 -1597.0605 -1597.0605 295.07754 295.07754 181425.77 181425.77 130.49309 130.49309 15000 -1523.9859 -1523.9859 -1599.7243 -1599.7243 293.11533 293.11533 182145.69 182145.69 17.788571 17.788571 Loop time of 3.85245 on 1 procs for 1000 steps with 2000 atoms Performance: 22.427 ns/day, 1.070 hours/ns, 259.575 timesteps/s 50.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 3.5232 | 3.5232 | 3.5232 | 0.0 | 91.45 Neigh | 0.062504 | 0.062504 | 0.062504 | 0.0 | 1.62 Comm | 0.018516 | 0.018516 | 0.018516 | 0.0 | 0.48 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.21865 | 0.21865 | 0.21865 | 0.0 | 5.68 Other | | 0.02954 | | | 0.77 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2903 ave 2903 max 2903 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 71904 ave 71904 max 71904 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 71904 Ave neighs/atom = 35.952 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.540434335227, Press = 0.368525835250546 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -1523.9859 -1523.9859 -1599.7243 -1599.7243 293.11533 293.11533 182145.69 182145.69 17.788571 17.788571 16000 -1521.152 -1521.152 -1598.9108 -1598.9108 300.93462 300.93462 182201.69 182201.69 24.389339 24.389339 Loop time of 3.80393 on 1 procs for 1000 steps with 2000 atoms Performance: 22.713 ns/day, 1.057 hours/ns, 262.886 timesteps/s 50.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 3.5508 | 3.5508 | 3.5508 | 0.0 | 93.34 Neigh | 0.041974 | 0.041974 | 0.041974 | 0.0 | 1.10 Comm | 0.018254 | 0.018254 | 0.018254 | 0.0 | 0.48 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.1836 | 0.1836 | 0.1836 | 0.0 | 4.83 Other | | 0.00932 | | | 0.25 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2909 ave 2909 max 2909 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 71974 ave 71974 max 71974 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 71974 Ave neighs/atom = 35.987 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.444514436617, Press = -0.042987501084376 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -1521.152 -1521.152 -1598.9108 -1598.9108 300.93462 300.93462 182201.69 182201.69 24.389339 24.389339 17000 -1521.9092 -1521.9092 -1598.4317 -1598.4317 296.14972 296.14972 181957.67 181957.67 48.126369 48.126369 Loop time of 3.68865 on 1 procs for 1000 steps with 2000 atoms Performance: 23.423 ns/day, 1.025 hours/ns, 271.102 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 3.3819 | 3.3819 | 3.3819 | 0.0 | 91.68 Neigh | 0.059931 | 0.059931 | 0.059931 | 0.0 | 1.62 Comm | 0.037774 | 0.037774 | 0.037774 | 0.0 | 1.02 Output | 2.1935e-05 | 2.1935e-05 | 2.1935e-05 | 0.0 | 0.00 Modify | 0.18478 | 0.18478 | 0.18478 | 0.0 | 5.01 Other | | 0.02423 | | | 0.66 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2887 ave 2887 max 2887 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 71390 ave 71390 max 71390 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 71390 Ave neighs/atom = 35.695 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.452591791095, Press = -0.497412998968549 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -1521.9092 -1521.9092 -1598.4317 -1598.4317 296.14972 296.14972 181957.67 181957.67 48.126369 48.126369 18000 -1523.9674 -1523.9674 -1597.3011 -1597.3011 283.80899 283.80899 181203.67 181203.67 144.72905 144.72905 Loop time of 3.77641 on 1 procs for 1000 steps with 2000 atoms Performance: 22.879 ns/day, 1.049 hours/ns, 264.802 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 3.4319 | 3.4319 | 3.4319 | 0.0 | 90.88 Neigh | 0.082535 | 0.082535 | 0.082535 | 0.0 | 2.19 Comm | 0.018305 | 0.018305 | 0.018305 | 0.0 | 0.48 Output | 2.1935e-05 | 2.1935e-05 | 2.1935e-05 | 0.0 | 0.00 Modify | 0.23426 | 0.23426 | 0.23426 | 0.0 | 6.20 Other | | 0.009419 | | | 0.25 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2906 ave 2906 max 2906 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 72720 ave 72720 max 72720 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 72720 Ave neighs/atom = 36.36 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.38551190806, Press = 0.32045691482189 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -1523.9674 -1523.9674 -1597.3011 -1597.3011 283.80899 283.80899 181203.67 181203.67 144.72905 144.72905 19000 -1523.1317 -1523.1317 -1598.6213 -1598.6213 292.15267 292.15267 181850.95 181850.95 53.76309 53.76309 Loop time of 3.72684 on 1 procs for 1000 steps with 2000 atoms Performance: 23.183 ns/day, 1.035 hours/ns, 268.324 timesteps/s 50.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 3.4001 | 3.4001 | 3.4001 | 0.0 | 91.23 Neigh | 0.02382 | 0.02382 | 0.02382 | 0.0 | 0.64 Comm | 0.088162 | 0.088162 | 0.088162 | 0.0 | 2.37 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.18568 | 0.18568 | 0.18568 | 0.0 | 4.98 Other | | 0.02908 | | | 0.78 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2867 ave 2867 max 2867 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 72592 ave 72592 max 72592 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 72592 Ave neighs/atom = 36.296 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.455605362789, Press = 0.9719613435553 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -1523.1317 -1523.1317 -1598.6213 -1598.6213 292.15267 292.15267 181850.95 181850.95 53.76309 53.76309 20000 -1520.5545 -1520.5545 -1598.277 -1598.277 300.79413 300.79413 182628.91 182628.91 -48.960749 -48.960749 Loop time of 3.75542 on 1 procs for 1000 steps with 2000 atoms Performance: 23.007 ns/day, 1.043 hours/ns, 266.282 timesteps/s 50.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 3.4989 | 3.4989 | 3.4989 | 0.0 | 93.17 Neigh | 0.065294 | 0.065294 | 0.065294 | 0.0 | 1.74 Comm | 0.017988 | 0.017988 | 0.017988 | 0.0 | 0.48 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.16399 | 0.16399 | 0.16399 | 0.0 | 4.37 Other | | 0.009208 | | | 0.25 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2894 ave 2894 max 2894 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 71850 ave 71850 max 71850 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 71850 Ave neighs/atom = 35.925 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.403778176601, Press = 0.35165614698693 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -1520.5545 -1520.5545 -1598.277 -1598.277 300.79413 300.79413 182628.91 182628.91 -48.960749 -48.960749 21000 -1520.6939 -1520.6939 -1598.2189 -1598.2189 300.02991 300.02991 182395.95 182395.95 -27.698913 -27.698913 Loop time of 3.78261 on 1 procs for 1000 steps with 2000 atoms Performance: 22.841 ns/day, 1.051 hours/ns, 264.368 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 3.5001 | 3.5001 | 3.5001 | 0.0 | 92.53 Neigh | 0.042174 | 0.042174 | 0.042174 | 0.0 | 1.11 Comm | 0.038184 | 0.038184 | 0.038184 | 0.0 | 1.01 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.19284 | 0.19284 | 0.19284 | 0.0 | 5.10 Other | | 0.009228 | | | 0.24 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2867 ave 2867 max 2867 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 71890 ave 71890 max 71890 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 71890 Ave neighs/atom = 35.945 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 182263.434740577 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0