# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.143477164208889*${_u_distance} variable latticeconst_converted equal 5.143477164208889*1 lattice fcc ${latticeconst_converted} lattice fcc 5.14347716420889 Lattice spacing in x,y,z = 5.14348 5.14348 5.14348 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (51.4348 51.4348 51.4348) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000485182 secs variable mass_converted equal 173.04*${_u_mass} variable mass_converted equal 173.04*1 # specify which KIM Model to use pair_style kim LJ_ElliottAkerson_2015_Universal__MO_959249795837_003 pair_coeff * * Yb mass 1 ${mass_converted} mass 1 173.04 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 136072.526342787 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 136072.526342787/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 136072.526342787/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 136072.526342787/(1*1*${_u_distance}) variable V0_metal equal 136072.526342787/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 136072.526342787*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 136072.526342787 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 20.5307 ghost atom cutoff = 20.5307 binsize = 10.2653, bins = 6 6 6 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 20.5307 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -4180.3665 -4180.3665 -4342.2373 -4342.2373 313.15 313.15 136072.53 136072.53 1270.6237 1270.6237 1000 -3991.2696 -3991.2696 -4156.3425 -4156.3425 319.34472 319.34472 140428.05 140428.05 214.79306 214.79306 Loop time of 57.391 on 1 procs for 1000 steps with 4000 atoms Performance: 1.505 ns/day, 15.942 hours/ns, 17.424 timesteps/s 43.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 56.401 | 56.401 | 56.401 | 0.0 | 98.27 Neigh | 0.26584 | 0.26584 | 0.26584 | 0.0 | 0.46 Comm | 0.24505 | 0.24505 | 0.24505 | 0.0 | 0.43 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.3933 | 0.3933 | 0.3933 | 0.0 | 0.69 Other | | 0.08603 | | | 0.15 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17437 ave 17437 max 17437 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.12733e+06 ave 4.12733e+06 max 4.12733e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4127326 Ave neighs/atom = 1031.83 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -3991.2696 -3991.2696 -4156.3425 -4156.3425 319.34472 319.34472 140428.05 140428.05 214.79306 214.79306 2000 -4010.2409 -4010.2409 -4173.7075 -4173.7075 316.23732 316.23732 140240.85 140240.85 -343.61855 -343.61855 Loop time of 52.3162 on 1 procs for 1000 steps with 4000 atoms Performance: 1.651 ns/day, 14.532 hours/ns, 19.115 timesteps/s 44.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 51.58 | 51.58 | 51.58 | 0.0 | 98.59 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.27042 | 0.27042 | 0.27042 | 0.0 | 0.52 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.39982 | 0.39982 | 0.39982 | 0.0 | 0.76 Other | | 0.06593 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17477 ave 17477 max 17477 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.08436e+06 ave 4.08436e+06 max 4.08436e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4084364 Ave neighs/atom = 1021.09 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -4010.2409 -4010.2409 -4173.7075 -4173.7075 316.23732 316.23732 140240.85 140240.85 -343.61855 -343.61855 3000 -4010.374 -4010.374 -4170.5713 -4170.5713 309.91258 309.91258 140298.79 140298.79 -347.45212 -347.45212 Loop time of 51.8596 on 1 procs for 1000 steps with 4000 atoms Performance: 1.666 ns/day, 14.405 hours/ns, 19.283 timesteps/s 45.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 51.273 | 51.273 | 51.273 | 0.0 | 98.87 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16074 | 0.16074 | 0.16074 | 0.0 | 0.31 Output | 4.0054e-05 | 4.0054e-05 | 4.0054e-05 | 0.0 | 0.00 Modify | 0.36939 | 0.36939 | 0.36939 | 0.0 | 0.71 Other | | 0.05649 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17461 ave 17461 max 17461 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.09655e+06 ave 4.09655e+06 max 4.09655e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4096554 Ave neighs/atom = 1024.14 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -4010.374 -4010.374 -4170.5713 -4170.5713 309.91258 309.91258 140298.79 140298.79 -347.45212 -347.45212 4000 -4007.7549 -4007.7549 -4171.7168 -4171.7168 317.19546 317.19546 140131.79 140131.79 85.671024 85.671024 Loop time of 49.4507 on 1 procs for 1000 steps with 4000 atoms Performance: 1.747 ns/day, 13.736 hours/ns, 20.222 timesteps/s 47.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.983 | 48.983 | 48.983 | 0.0 | 99.05 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1421 | 0.1421 | 0.1421 | 0.0 | 0.29 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.27901 | 0.27901 | 0.27901 | 0.0 | 0.56 Other | | 0.04639 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17467 ave 17467 max 17467 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.09231e+06 ave 4.09231e+06 max 4.09231e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4092312 Ave neighs/atom = 1023.08 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -4007.7549 -4007.7549 -4171.7168 -4171.7168 317.19546 317.19546 140131.79 140131.79 85.671024 85.671024 5000 -4006.3841 -4006.3841 -4171.3565 -4171.3565 319.15043 319.15043 140279.01 140279.01 -284.89667 -284.89667 Loop time of 49.6908 on 1 procs for 1000 steps with 4000 atoms Performance: 1.739 ns/day, 13.803 hours/ns, 20.124 timesteps/s 47.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 49.201 | 49.201 | 49.201 | 0.0 | 99.01 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20307 | 0.20307 | 0.20307 | 0.0 | 0.41 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.26059 | 0.26059 | 0.26059 | 0.0 | 0.52 Other | | 0.02655 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17479 ave 17479 max 17479 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.10019e+06 ave 4.10019e+06 max 4.10019e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4100190 Ave neighs/atom = 1025.05 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 308.257259492105, Press = -111.364186104742 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -4006.3841 -4006.3841 -4171.3565 -4171.3565 319.15043 319.15043 140279.01 140279.01 -284.89667 -284.89667 6000 -4011.2817 -4011.2817 -4171.1366 -4171.1366 309.25029 309.25029 140189.34 140189.34 -80.682771 -80.682771 Loop time of 49.5081 on 1 procs for 1000 steps with 4000 atoms Performance: 1.745 ns/day, 13.752 hours/ns, 20.199 timesteps/s 48.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.905 | 48.905 | 48.905 | 0.0 | 98.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21252 | 0.21252 | 0.21252 | 0.0 | 0.43 Output | 3.2187e-05 | 3.2187e-05 | 3.2187e-05 | 0.0 | 0.00 Modify | 0.28432 | 0.28432 | 0.28432 | 0.0 | 0.57 Other | | 0.1062 | | | 0.21 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17466 ave 17466 max 17466 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.09504e+06 ave 4.09504e+06 max 4.09504e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4095036 Ave neighs/atom = 1023.76 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.121093771792, Press = 1.2859732391378 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -4011.2817 -4011.2817 -4171.1366 -4171.1366 309.25029 309.25029 140189.34 140189.34 -80.682771 -80.682771 7000 -4006.6364 -4006.6364 -4168.4539 -4168.4539 313.04681 313.04681 140122.72 140122.72 287.19351 287.19351 Loop time of 52.1794 on 1 procs for 1000 steps with 4000 atoms Performance: 1.656 ns/day, 14.494 hours/ns, 19.165 timesteps/s 45.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 51.39 | 51.39 | 51.39 | 0.0 | 98.49 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2285 | 0.2285 | 0.2285 | 0.0 | 0.44 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.4944 | 0.4944 | 0.4944 | 0.0 | 0.95 Other | | 0.06656 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17476 ave 17476 max 17476 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.09725e+06 ave 4.09725e+06 max 4.09725e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4097252 Ave neighs/atom = 1024.31 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.011379409535, Press = -3.70978678330577 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -4006.6364 -4006.6364 -4168.4539 -4168.4539 313.04681 313.04681 140122.72 140122.72 287.19351 287.19351 8000 -4011.783 -4011.783 -4172.3084 -4172.3084 310.54733 310.54733 140111.27 140111.27 76.463173 76.463173 Loop time of 50.2393 on 1 procs for 1000 steps with 4000 atoms Performance: 1.720 ns/day, 13.955 hours/ns, 19.905 timesteps/s 47.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 49.63 | 49.63 | 49.63 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21287 | 0.21287 | 0.21287 | 0.0 | 0.42 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.33505 | 0.33505 | 0.33505 | 0.0 | 0.67 Other | | 0.06122 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17473 ave 17473 max 17473 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.10147e+06 ave 4.10147e+06 max 4.10147e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4101474 Ave neighs/atom = 1025.37 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.295751011612, Press = -3.65078623013458 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -4011.783 -4011.783 -4172.3084 -4172.3084 310.54733 310.54733 140111.27 140111.27 76.463173 76.463173 9000 -4008.4276 -4008.4276 -4167.8557 -4167.8557 308.42442 308.42442 140319.85 140319.85 -236.29792 -236.29792 Loop time of 47.3694 on 1 procs for 1000 steps with 4000 atoms Performance: 1.824 ns/day, 13.158 hours/ns, 21.111 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.735 | 46.735 | 46.735 | 0.0 | 98.66 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26315 | 0.26315 | 0.26315 | 0.0 | 0.56 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.32505 | 0.32505 | 0.32505 | 0.0 | 0.69 Other | | 0.04608 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17475 ave 17475 max 17475 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.10034e+06 ave 4.10034e+06 max 4.10034e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4100336 Ave neighs/atom = 1025.08 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.15847785049, Press = -2.33045347729324 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -4008.4276 -4008.4276 -4167.8557 -4167.8557 308.42442 308.42442 140319.85 140319.85 -236.29792 -236.29792 10000 -4009.6444 -4009.6444 -4169.4032 -4169.4032 309.06422 309.06422 140465.9 140465.9 -717.97244 -717.97244 Loop time of 47.7712 on 1 procs for 1000 steps with 4000 atoms Performance: 1.809 ns/day, 13.270 hours/ns, 20.933 timesteps/s 49.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.127 | 47.127 | 47.127 | 0.0 | 98.65 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26281 | 0.26281 | 0.26281 | 0.0 | 0.55 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.35474 | 0.35474 | 0.35474 | 0.0 | 0.74 Other | | 0.02616 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17479 ave 17479 max 17479 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.09076e+06 ave 4.09076e+06 max 4.09076e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4090764 Ave neighs/atom = 1022.69 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.079161323932, Press = -1.80066843285756 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -4009.6444 -4009.6444 -4169.4032 -4169.4032 309.06422 309.06422 140465.9 140465.9 -717.97244 -717.97244 11000 -4010.5113 -4010.5113 -4171.4847 -4171.4847 311.41385 311.41385 140191.35 140191.35 -96.372899 -96.372899 Loop time of 46.9595 on 1 procs for 1000 steps with 4000 atoms Performance: 1.840 ns/day, 13.044 hours/ns, 21.295 timesteps/s 50.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.455 | 46.455 | 46.455 | 0.0 | 98.93 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16311 | 0.16311 | 0.16311 | 0.0 | 0.35 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.29526 | 0.29526 | 0.29526 | 0.0 | 0.63 Other | | 0.04618 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17482 ave 17482 max 17482 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.08598e+06 ave 4.08598e+06 max 4.08598e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4085982 Ave neighs/atom = 1021.5 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.976253998485, Press = 1.27545617623593 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -4010.5113 -4010.5113 -4171.4847 -4171.4847 311.41385 311.41385 140191.35 140191.35 -96.372899 -96.372899 12000 -4007.0482 -4007.0482 -4169.6979 -4169.6979 314.65686 314.65686 140103.08 140103.08 270.07796 270.07796 Loop time of 46.9954 on 1 procs for 1000 steps with 4000 atoms Performance: 1.838 ns/day, 13.054 hours/ns, 21.279 timesteps/s 50.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.522 | 46.522 | 46.522 | 0.0 | 98.99 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17452 | 0.17452 | 0.17452 | 0.0 | 0.37 Output | 2.718e-05 | 2.718e-05 | 2.718e-05 | 0.0 | 0.00 Modify | 0.23208 | 0.23208 | 0.23208 | 0.0 | 0.49 Other | | 0.06634 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17509 ave 17509 max 17509 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.09562e+06 ave 4.09562e+06 max 4.09562e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4095620 Ave neighs/atom = 1023.9 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.085085246638, Press = -0.578745827380793 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -4007.0482 -4007.0482 -4169.6979 -4169.6979 314.65686 314.65686 140103.08 140103.08 270.07796 270.07796 13000 -4011.5144 -4011.5144 -4168.6853 -4168.6853 304.05774 304.05774 140043.84 140043.84 436.29117 436.29117 Loop time of 47.1038 on 1 procs for 1000 steps with 4000 atoms Performance: 1.834 ns/day, 13.084 hours/ns, 21.230 timesteps/s 50.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.509 | 46.509 | 46.509 | 0.0 | 98.74 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25451 | 0.25451 | 0.25451 | 0.0 | 0.54 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.27422 | 0.27422 | 0.27422 | 0.0 | 0.58 Other | | 0.0663 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17500 ave 17500 max 17500 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.10074e+06 ave 4.10074e+06 max 4.10074e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4100738 Ave neighs/atom = 1025.18 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.268065436225, Press = 0.271884066863047 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -4011.5144 -4011.5144 -4168.6853 -4168.6853 304.05774 304.05774 140043.84 140043.84 436.29117 436.29117 14000 -4009.9789 -4009.9789 -4171.5638 -4171.5638 312.59682 312.59682 140163.45 140163.45 -26.103792 -26.103792 Loop time of 49.4059 on 1 procs for 1000 steps with 4000 atoms Performance: 1.749 ns/day, 13.724 hours/ns, 20.240 timesteps/s 48.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.882 | 48.882 | 48.882 | 0.0 | 98.94 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.18269 | 0.18269 | 0.18269 | 0.0 | 0.37 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.30284 | 0.30284 | 0.30284 | 0.0 | 0.61 Other | | 0.03852 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17508 ave 17508 max 17508 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.10428e+06 ave 4.10428e+06 max 4.10428e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4104278 Ave neighs/atom = 1026.07 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.204952891751, Press = 1.36074981911808 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -4009.9789 -4009.9789 -4171.5638 -4171.5638 312.59682 312.59682 140163.45 140163.45 -26.103792 -26.103792 15000 -4008.8301 -4008.8301 -4171.342 -4171.342 314.39017 314.39017 140082.76 140082.76 227.18403 227.18403 Loop time of 47.0343 on 1 procs for 1000 steps with 4000 atoms Performance: 1.837 ns/day, 13.065 hours/ns, 21.261 timesteps/s 50.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.409 | 46.409 | 46.409 | 0.0 | 98.67 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24688 | 0.24688 | 0.24688 | 0.0 | 0.52 Output | 3.2187e-05 | 3.2187e-05 | 3.2187e-05 | 0.0 | 0.00 Modify | 0.29279 | 0.29279 | 0.29279 | 0.0 | 0.62 Other | | 0.08611 | | | 0.18 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17481 ave 17481 max 17481 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.09846e+06 ave 4.09846e+06 max 4.09846e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4098462 Ave neighs/atom = 1024.62 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.282078766143, Press = -1.83447163025052 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -4008.8301 -4008.8301 -4171.342 -4171.342 314.39017 314.39017 140082.76 140082.76 227.18403 227.18403 16000 -4007.808 -4007.808 -4170.3265 -4170.3265 314.40289 314.40289 140266.32 140266.32 -213.80671 -213.80671 Loop time of 43.7776 on 1 procs for 1000 steps with 4000 atoms Performance: 1.974 ns/day, 12.160 hours/ns, 22.843 timesteps/s 54.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.228 | 43.228 | 43.228 | 0.0 | 98.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20319 | 0.20319 | 0.20319 | 0.0 | 0.46 Output | 2.5034e-05 | 2.5034e-05 | 2.5034e-05 | 0.0 | 0.00 Modify | 0.29933 | 0.29933 | 0.29933 | 0.0 | 0.68 Other | | 0.04663 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17490 ave 17490 max 17490 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.1031e+06 ave 4.1031e+06 max 4.1031e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4103104 Ave neighs/atom = 1025.78 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.336272832808, Press = 0.952335634912695 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -4007.808 -4007.808 -4170.3265 -4170.3265 314.40289 314.40289 140266.32 140266.32 -213.80671 -213.80671 17000 -4012.9852 -4012.9852 -4171.8578 -4171.8578 307.34989 307.34989 140078.56 140078.56 166.05026 166.05026 Loop time of 42.369 on 1 procs for 1000 steps with 4000 atoms Performance: 2.039 ns/day, 11.769 hours/ns, 23.602 timesteps/s 56.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.949 | 41.949 | 41.949 | 0.0 | 99.01 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16335 | 0.16335 | 0.16335 | 0.0 | 0.39 Output | 3.0994e-05 | 3.0994e-05 | 3.0994e-05 | 0.0 | 0.00 Modify | 0.22746 | 0.22746 | 0.22746 | 0.0 | 0.54 Other | | 0.02876 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17491 ave 17491 max 17491 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.0943e+06 ave 4.0943e+06 max 4.0943e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4094298 Ave neighs/atom = 1023.57 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.132379490438, Press = 1.10090764255087 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -4012.9852 -4012.9852 -4171.8578 -4171.8578 307.34989 307.34989 140078.56 140078.56 166.05026 166.05026 18000 -4004.3719 -4004.3719 -4168.8468 -4168.8468 318.18782 318.18782 140030.06 140030.06 539.25868 539.25868 Loop time of 54.4245 on 1 procs for 1000 steps with 4000 atoms Performance: 1.588 ns/day, 15.118 hours/ns, 18.374 timesteps/s 42.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 53.854 | 53.854 | 53.854 | 0.0 | 98.95 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25803 | 0.25803 | 0.25803 | 0.0 | 0.47 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.25737 | 0.25737 | 0.25737 | 0.0 | 0.47 Other | | 0.05491 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17495 ave 17495 max 17495 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.10324e+06 ave 4.10324e+06 max 4.10324e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4103240 Ave neighs/atom = 1025.81 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.174356136201, Press = 0.643107256356712 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -4004.3719 -4004.3719 -4168.8468 -4168.8468 318.18782 318.18782 140030.06 140030.06 539.25868 539.25868 19000 -4013.4364 -4013.4364 -4172.1184 -4172.1184 306.9811 306.9811 140050.99 140050.99 239.82986 239.82986 Loop time of 65.3069 on 1 procs for 1000 steps with 4000 atoms Performance: 1.323 ns/day, 18.141 hours/ns, 15.312 timesteps/s 35.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 64.639 | 64.639 | 64.639 | 0.0 | 98.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2922 | 0.2922 | 0.2922 | 0.0 | 0.45 Output | 3.2187e-05 | 3.2187e-05 | 3.2187e-05 | 0.0 | 0.00 Modify | 0.26669 | 0.26669 | 0.26669 | 0.0 | 0.41 Other | | 0.1085 | | | 0.17 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17518 ave 17518 max 17518 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.10388e+06 ave 4.10388e+06 max 4.10388e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4103876 Ave neighs/atom = 1025.97 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.197457185615, Press = -0.858853513442604 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -4013.4364 -4013.4364 -4172.1184 -4172.1184 306.9811 306.9811 140050.99 140050.99 239.82986 239.82986 20000 -4008.3414 -4008.3414 -4169.3091 -4169.3091 311.40293 311.40293 140169.01 140169.01 97.2682 97.2682 Loop time of 58.069 on 1 procs for 1000 steps with 4000 atoms Performance: 1.488 ns/day, 16.130 hours/ns, 17.221 timesteps/s 40.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 57.234 | 57.234 | 57.234 | 0.0 | 98.56 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21151 | 0.21151 | 0.21151 | 0.0 | 0.36 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.51572 | 0.51572 | 0.51572 | 0.0 | 0.89 Other | | 0.1075 | | | 0.19 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17497 ave 17497 max 17497 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.10342e+06 ave 4.10342e+06 max 4.10342e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4103416 Ave neighs/atom = 1025.85 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.132690050614, Press = -1.37763990660648 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -4008.3414 -4008.3414 -4169.3091 -4169.3091 311.40293 311.40293 140169.01 140169.01 97.2682 97.2682 21000 -4015.2101 -4015.2101 -4173.5385 -4173.5385 306.29709 306.29709 140146.11 140146.11 -123.10439 -123.10439 Loop time of 59.4633 on 1 procs for 1000 steps with 4000 atoms Performance: 1.453 ns/day, 16.518 hours/ns, 16.817 timesteps/s 38.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.792 | 58.792 | 58.792 | 0.0 | 98.87 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.27395 | 0.27395 | 0.27395 | 0.0 | 0.46 Output | 2.9802e-05 | 2.9802e-05 | 2.9802e-05 | 0.0 | 0.00 Modify | 0.29039 | 0.29039 | 0.29039 | 0.0 | 0.49 Other | | 0.1072 | | | 0.18 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17474 ave 17474 max 17474 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.09984e+06 ave 4.09984e+06 max 4.09984e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4099842 Ave neighs/atom = 1024.96 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.085772981606, Press = 0.332748875524571 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -4015.2101 -4015.2101 -4173.5385 -4173.5385 306.29709 306.29709 140146.11 140146.11 -123.10439 -123.10439 22000 -4002.7213 -4002.7213 -4167.373 -4167.373 318.52985 318.52985 140480.78 140480.78 -605.58457 -605.58457 Loop time of 62.0897 on 1 procs for 1000 steps with 4000 atoms Performance: 1.392 ns/day, 17.247 hours/ns, 16.106 timesteps/s 37.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 61.31 | 61.31 | 61.31 | 0.0 | 98.74 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.36902 | 0.36902 | 0.36902 | 0.0 | 0.59 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.34042 | 0.34042 | 0.34042 | 0.0 | 0.55 Other | | 0.07035 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17485 ave 17485 max 17485 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.09929e+06 ave 4.09929e+06 max 4.09929e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4099290 Ave neighs/atom = 1024.82 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.079108551803, Press = 0.589508133730428 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -4002.7213 -4002.7213 -4167.373 -4167.373 318.52985 318.52985 140480.78 140480.78 -605.58457 -605.58457 23000 -4013.0133 -4013.0133 -4171.7201 -4171.7201 307.02902 307.02902 140003.59 140003.59 389.37276 389.37276 Loop time of 50.7578 on 1 procs for 1000 steps with 4000 atoms Performance: 1.702 ns/day, 14.099 hours/ns, 19.701 timesteps/s 45.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 50.275 | 50.275 | 50.275 | 0.0 | 99.05 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21789 | 0.21789 | 0.21789 | 0.0 | 0.43 Output | 3.2187e-05 | 3.2187e-05 | 3.2187e-05 | 0.0 | 0.00 Modify | 0.2398 | 0.2398 | 0.2398 | 0.0 | 0.47 Other | | 0.02548 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17483 ave 17483 max 17483 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.08504e+06 ave 4.08504e+06 max 4.08504e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4085042 Ave neighs/atom = 1021.26 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.077890477028, Press = 0.261285163421966 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 22.84 | 22.84 | 22.84 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -4013.0133 -4013.0133 -4171.7201 -4171.7201 307.02902 307.02902 140003.59 140003.59 389.37276 389.37276 24000 -4005.3822 -4005.3822 -4169.2694 -4169.2694 317.05079 317.05079 139897.3 139897.3 883.61304 883.61304 Loop time of 59.475 on 1 procs for 1000 steps with 4000 atoms Performance: 1.453 ns/day, 16.521 hours/ns, 16.814 timesteps/s 39.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.835 | 58.835 | 58.835 | 0.0 | 98.92 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21256 | 0.21256 | 0.21256 | 0.0 | 0.36 Output | 2.5034e-05 | 2.5034e-05 | 2.5034e-05 | 0.0 | 0.00 Modify | 0.39516 | 0.39516 | 0.39516 | 0.0 | 0.66 Other | | 0.03236 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 17474 ave 17474 max 17474 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.10752e+06 ave 4.10752e+06 max 4.10752e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4107522 Ave neighs/atom = 1026.88 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 140182.625231224 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0