-------------------------------------------------------------------------- By default, for Open MPI 4.0 and later, infiniband ports on a device are not used by default. The intent is to use UCX for these devices. You can override this policy by setting the btl_openib_allow_ib MCA parameter to true. Local host: c405-021 Local adapter: hfi1_0 Local port: 1 -------------------------------------------------------------------------- -------------------------------------------------------------------------- WARNING: There was an error initializing an OpenFabrics device. Local host: c405-021 Local device: hfi1_0 -------------------------------------------------------------------------- corrupted size vs. prev_size [c405-021:149328] *** Process received signal *** [c405-021:149328] Signal: Aborted (6) [c405-021:149328] Signal code: (-6) [c405-021:149328] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x2ad82af7a090] [c405-021:149328] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x2ad82af7a00b] [c405-021:149328] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x2ad82af59859] [c405-021:149328] [ 3] /lib/x86_64-linux-gnu/libc.so.6(+0x8d26e)[0x2ad82afc426e] [c405-021:149328] [ 4] /lib/x86_64-linux-gnu/libc.so.6(+0x952fc)[0x2ad82afcc2fc] [c405-021:149328] [ 5] /lib/x86_64-linux-gnu/libc.so.6(+0x9596b)[0x2ad82afcc96b] [c405-021:149328] [ 6] /lib/x86_64-linux-gnu/libc.so.6(+0x96e8b)[0x2ad82afcde8b] [c405-021:149328] [ 7] /usr/local/lib/liblammps.so(_ZN9LAMMPS_NS12FixQEqReaxFFD1Ev+0x6e)[0x2ad9420cdb7e] [c405-021:149328] [ 8] /usr/local/lib/liblammps.so(_ZN9LAMMPS_NS12FixQEqReaxFFD0Ev+0xd)[0x2ad9420cdcbd] [c405-021:149328] [ 9] /usr/local/lib/liblammps.so(_ZN9LAMMPS_NS6Modify7add_fixEiPPci+0x6c6)[0x2ad941ced206] [c405-021:149328] [10] /usr/local/lib/liblammps.so(_ZN9LAMMPS_NS5Input15execute_commandEv+0xbc4)[0x2ad941c820c4] [c405-021:149328] [11] /usr/local/lib/liblammps.so(_ZN9LAMMPS_NS5Input3oneERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0xa9)[0x2ad941c82cd9] [c405-021:149328] [12] /usr/local/lib/liblammps.so(_ZN9LAMMPS_NS15KimInteractions8do_setupEiPPc+0xf8b)[0x2ad941e42d5b] [c405-021:149328] [13] /usr/local/lib/liblammps.so(_ZN9LAMMPS_NS15KimInteractions7commandEiPPc+0x38)[0x2ad941e43a78] [c405-021:149328] [14] /usr/local/lib/liblammps.so(_ZN9LAMMPS_NS10KimCommand7commandEiPPc+0x3ee)[0x2ad941e3a83e] [c405-021:149328] [15] /usr/local/lib/liblammps.so(_ZN9LAMMPS_NS5Input15execute_commandEv+0xc38)[0x2ad941c82138] [c405-021:149328] [16] /usr/local/lib/liblammps.so(_ZN9LAMMPS_NS5Input3oneERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0xa9)[0x2ad941c82cd9] [c405-021:149328] [17] /usr/local/lib/liblammps.so(_ZN9LAMMPS_NS10Deprecated7commandEiPPc+0x4fb)[0x2ad941b18a0b] [c405-021:149328] [18] /usr/local/lib/liblammps.so(_ZN9LAMMPS_NS5Input15execute_commandEv+0xc38)[0x2ad941c82138] [c405-021:149328] [19] /usr/local/lib/liblammps.so(_ZN9LAMMPS_NS5Input3oneERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0xa9)[0x2ad941c82cd9] [c405-021:149328] [20] /usr/local/lib/liblammps.so(lammps_command+0x92)[0x2ad941cc0fe2] [c405-021:149328] [21] /lib/x86_64-linux-gnu/libffi.so.7(+0x6ff5)[0x2ad8b4c63ff5] [c405-021:149328] [22] /lib/x86_64-linux-gnu/libffi.so.7(+0x640a)[0x2ad8b4c6340a] [c405-021:149328] [23] /usr/lib/python3.8/lib-dynload/_ctypes.cpython-38-x86_64-linux-gnu.so(_ctypes_callproc+0x5b6)[0x2ad8b4c47306] [c405-021:149328] [24] /usr/lib/python3.8/lib-dynload/_ctypes.cpython-38-x86_64-linux-gnu.so(+0x13ae7)[0x2ad8b4c47ae7] [c405-021:149328] [25] python3(_PyObject_MakeTpCall+0x296)[0x5f7056] [c405-021:149328] [26] python3(_PyEval_EvalFrameDefault+0x5dae)[0x57107e] [c405-021:149328] [27] python3(_PyFunction_Vectorcall+0x1b6)[0x5f6836] [c405-021:149328] [28] python3(_PyEval_EvalFrameDefault+0x90f)[0x56bbdf] [c405-021:149328] [29] python3(_PyEval_EvalCodeWithName+0x26a)[0x569cea] [c405-021:149328] *** End of error message *** Aborted Command exited with non-zero status 134 {"realtime":16.96,"usertime":25.07,"systime":41.72,"memmax":128532,"memavg":0}