# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.910130411386494*${_u_distance} variable latticeconst_converted equal 4.910130411386494*1 lattice fcc ${latticeconst_converted} lattice fcc 4.91013041138649 Lattice spacing in x,y,z = 4.91013 4.91013 4.91013 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (49.1013 49.1013 49.1013) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000482798 secs variable mass_converted equal 207.2*${_u_mass} variable mass_converted equal 207.2*1 # specify which KIM Model to use pair_style kim EAM_Dynamo_HoytGarvinWebb_2003_PbCu__MO_119135752160_005 pair_coeff * * Pb mass 1 ${mass_converted} mass 1 207.2 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 118380.203162757 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 118380.203162757/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 118380.203162757/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 118380.203162757/(1*1*${_u_distance}) variable V0_metal equal 118380.203162757/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 118380.203162757*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 118380.203162757 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.77721 ghost atom cutoff = 7.77721 binsize = 3.8886, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.77721 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -7958.1261 -7958.1261 -8119.9968 -8119.9968 313.15 313.15 118380.2 118380.2 1460.5293 1460.5293 1000 -7815.5378 -7815.5378 -7970.4515 -7970.4515 299.69112 299.69112 121539.97 121539.97 -145.11626 -145.11626 Loop time of 9.70276 on 1 procs for 1000 steps with 4000 atoms Performance: 8.905 ns/day, 2.695 hours/ns, 103.063 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.2291 | 9.2291 | 9.2291 | 0.0 | 95.12 Neigh | 0.092194 | 0.092194 | 0.092194 | 0.0 | 0.95 Comm | 0.10174 | 0.10174 | 0.10174 | 0.0 | 1.05 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.2599 | 0.2599 | 0.2599 | 0.0 | 2.68 Other | | 0.01979 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5790 ave 5790 max 5790 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 255152 ave 255152 max 255152 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 255152 Ave neighs/atom = 63.788 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -7815.5378 -7815.5378 -7970.4515 -7970.4515 299.69112 299.69112 121539.97 121539.97 -145.11626 -145.11626 2000 -7819.8387 -7819.8387 -7983.6451 -7983.6451 316.8946 316.8946 121326.89 121326.89 -10.12759 -10.12759 Loop time of 9.49637 on 1 procs for 1000 steps with 4000 atoms Performance: 9.098 ns/day, 2.638 hours/ns, 105.303 timesteps/s 52.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 8.9718 | 8.9718 | 8.9718 | 0.0 | 94.48 Neigh | 0.08192 | 0.08192 | 0.08192 | 0.0 | 0.86 Comm | 0.061521 | 0.061521 | 0.061521 | 0.0 | 0.65 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.32111 | 0.32111 | 0.32111 | 0.0 | 3.38 Other | | 0.05997 | | | 0.63 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5788 ave 5788 max 5788 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 254638 ave 254638 max 254638 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 254638 Ave neighs/atom = 63.6595 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -7819.8387 -7819.8387 -7983.6451 -7983.6451 316.8946 316.8946 121326.89 121326.89 -10.12759 -10.12759 3000 -7824.382 -7824.382 -7983.5976 -7983.5976 308.0133 308.0133 121310.17 121310.17 64.629163 64.629163 Loop time of 9.42636 on 1 procs for 1000 steps with 4000 atoms Performance: 9.166 ns/day, 2.618 hours/ns, 106.085 timesteps/s 52.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 8.7777 | 8.7777 | 8.7777 | 0.0 | 93.12 Neigh | 0.078328 | 0.078328 | 0.078328 | 0.0 | 0.83 Comm | 0.10285 | 0.10285 | 0.10285 | 0.0 | 1.09 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.42798 | 0.42798 | 0.42798 | 0.0 | 4.54 Other | | 0.03951 | | | 0.42 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5796 ave 5796 max 5796 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 254726 ave 254726 max 254726 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 254726 Ave neighs/atom = 63.6815 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -7824.382 -7824.382 -7983.5976 -7983.5976 308.0133 308.0133 121310.17 121310.17 64.629163 64.629163 4000 -7819.0025 -7819.0025 -7981.7212 -7981.7212 314.7902 314.7902 121292.09 121292.09 254.08694 254.08694 Loop time of 9.94208 on 1 procs for 1000 steps with 4000 atoms Performance: 8.690 ns/day, 2.762 hours/ns, 100.583 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.533 | 9.533 | 9.533 | 0.0 | 95.89 Neigh | 0.027967 | 0.027967 | 0.027967 | 0.0 | 0.28 Comm | 0.081372 | 0.081372 | 0.081372 | 0.0 | 0.82 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.27999 | 0.27999 | 0.27999 | 0.0 | 2.82 Other | | 0.01967 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5796 ave 5796 max 5796 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 254558 ave 254558 max 254558 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 254558 Ave neighs/atom = 63.6395 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -7819.0025 -7819.0025 -7981.7212 -7981.7212 314.7902 314.7902 121292.09 121292.09 254.08694 254.08694 5000 -7822.5672 -7822.5672 -7979.9897 -7979.9897 304.54437 304.54437 121454.77 121454.77 -426.86223 -426.86223 Loop time of 9.77638 on 1 procs for 1000 steps with 4000 atoms Performance: 8.838 ns/day, 2.716 hours/ns, 102.287 timesteps/s 49.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.144 | 9.144 | 9.144 | 0.0 | 93.53 Neigh | 0.081836 | 0.081836 | 0.081836 | 0.0 | 0.84 Comm | 0.16137 | 0.16137 | 0.16137 | 0.0 | 1.65 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.34959 | 0.34959 | 0.34959 | 0.0 | 3.58 Other | | 0.03952 | | | 0.40 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5801 ave 5801 max 5801 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 254342 ave 254342 max 254342 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 254342 Ave neighs/atom = 63.5855 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 307.793142849304, Press = -229.697460834016 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -7822.5672 -7822.5672 -7979.9897 -7979.9897 304.54437 304.54437 121454.77 121454.77 -426.86223 -426.86223 6000 -7819.4625 -7819.4625 -7981.1916 -7981.1916 312.87604 312.87604 121215.59 121215.59 698.56639 698.56639 Loop time of 9.07343 on 1 procs for 1000 steps with 4000 atoms Performance: 9.522 ns/day, 2.520 hours/ns, 110.212 timesteps/s 54.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 8.6465 | 8.6465 | 8.6465 | 0.0 | 95.29 Neigh | 0.051489 | 0.051489 | 0.051489 | 0.0 | 0.57 Comm | 0.061142 | 0.061142 | 0.061142 | 0.0 | 0.67 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.27433 | 0.27433 | 0.27433 | 0.0 | 3.02 Other | | 0.03997 | | | 0.44 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5798 ave 5798 max 5798 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 254818 ave 254818 max 254818 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 254818 Ave neighs/atom = 63.7045 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.795146012978, Press = 6.57606117977167 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -7819.4625 -7819.4625 -7981.1916 -7981.1916 312.87604 312.87604 121215.59 121215.59 698.56639 698.56639 7000 -7820.6231 -7820.6231 -7980.9379 -7980.9379 310.13978 310.13978 121213.26 121213.26 766.92564 766.92564 Loop time of 9.03019 on 1 procs for 1000 steps with 4000 atoms Performance: 9.568 ns/day, 2.508 hours/ns, 110.740 timesteps/s 54.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 8.5088 | 8.5088 | 8.5088 | 0.0 | 94.23 Neigh | 0.082847 | 0.082847 | 0.082847 | 0.0 | 0.92 Comm | 0.081164 | 0.081164 | 0.081164 | 0.0 | 0.90 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.33763 | 0.33763 | 0.33763 | 0.0 | 3.74 Other | | 0.01974 | | | 0.22 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5755 ave 5755 max 5755 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 254982 ave 254982 max 254982 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 254982 Ave neighs/atom = 63.7455 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.089082276529, Press = -9.61312516356559 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -7820.6231 -7820.6231 -7980.9379 -7980.9379 310.13978 310.13978 121213.26 121213.26 766.92564 766.92564 8000 -7815.7187 -7815.7187 -7978.4655 -7978.4655 314.84476 314.84476 121513.62 121513.62 -563.89579 -563.89579 Loop time of 6.79825 on 1 procs for 1000 steps with 4000 atoms Performance: 12.709 ns/day, 1.888 hours/ns, 147.097 timesteps/s 72.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 6.378 | 6.378 | 6.378 | 0.0 | 93.82 Neigh | 0.042136 | 0.042136 | 0.042136 | 0.0 | 0.62 Comm | 0.061705 | 0.061705 | 0.061705 | 0.0 | 0.91 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.29669 | 0.29669 | 0.29669 | 0.0 | 4.36 Other | | 0.01964 | | | 0.29 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5782 ave 5782 max 5782 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 255456 ave 255456 max 255456 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 255456 Ave neighs/atom = 63.864 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.296134376028, Press = -8.9821712084402 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -7815.7187 -7815.7187 -7978.4655 -7978.4655 314.84476 314.84476 121513.62 121513.62 -563.89579 -563.89579 9000 -7828.2084 -7828.2084 -7984.5978 -7984.5978 302.54594 302.54594 121470.29 121470.29 -815.87309 -815.87309 Loop time of 9.25275 on 1 procs for 1000 steps with 4000 atoms Performance: 9.338 ns/day, 2.570 hours/ns, 108.076 timesteps/s 53.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 8.6577 | 8.6577 | 8.6577 | 0.0 | 93.57 Neigh | 0.09756 | 0.09756 | 0.09756 | 0.0 | 1.05 Comm | 0.081195 | 0.081195 | 0.081195 | 0.0 | 0.88 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.37665 | 0.37665 | 0.37665 | 0.0 | 4.07 Other | | 0.03962 | | | 0.43 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5798 ave 5798 max 5798 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 255200 ave 255200 max 255200 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 255200 Ave neighs/atom = 63.8 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.351303640802, Press = -0.930727924034246 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -7828.2084 -7828.2084 -7984.5978 -7984.5978 302.54594 302.54594 121470.29 121470.29 -815.87309 -815.87309 10000 -7822.723 -7822.723 -7984.8871 -7984.8871 313.71751 313.71751 121243.22 121243.22 338.0117 338.0117 Loop time of 9.8506 on 1 procs for 1000 steps with 4000 atoms Performance: 8.771 ns/day, 2.736 hours/ns, 101.517 timesteps/s 50.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.2447 | 9.2447 | 9.2447 | 0.0 | 93.85 Neigh | 0.078808 | 0.078808 | 0.078808 | 0.0 | 0.80 Comm | 0.061619 | 0.061619 | 0.061619 | 0.0 | 0.63 Output | 4.1008e-05 | 4.1008e-05 | 4.1008e-05 | 0.0 | 0.00 Modify | 0.42526 | 0.42526 | 0.42526 | 0.0 | 4.32 Other | | 0.04018 | | | 0.41 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5798 ave 5798 max 5798 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 254788 ave 254788 max 254788 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 254788 Ave neighs/atom = 63.697 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.090217709554, Press = -0.40854047563522 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -7822.723 -7822.723 -7984.8871 -7984.8871 313.71751 313.71751 121243.22 121243.22 338.0117 338.0117 11000 -7821.8815 -7821.8815 -7984.1207 -7984.1207 313.86273 313.86273 121349.86 121349.86 -109.41308 -109.41308 Loop time of 9.29286 on 1 procs for 1000 steps with 4000 atoms Performance: 9.297 ns/day, 2.581 hours/ns, 107.609 timesteps/s 52.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 8.8603 | 8.8603 | 8.8603 | 0.0 | 95.35 Neigh | 0.04903 | 0.04903 | 0.04903 | 0.0 | 0.53 Comm | 0.10077 | 0.10077 | 0.10077 | 0.0 | 1.08 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.26293 | 0.26293 | 0.26293 | 0.0 | 2.83 Other | | 0.01976 | | | 0.21 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5793 ave 5793 max 5793 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 254478 ave 254478 max 254478 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 254478 Ave neighs/atom = 63.6195 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.899227898329, Press = -3.02457015224155 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -7821.8815 -7821.8815 -7984.1207 -7984.1207 313.86273 313.86273 121349.86 121349.86 -109.41308 -109.41308 12000 -7816.7547 -7816.7547 -7981.4414 -7981.4414 318.5977 318.5977 121467.64 121467.64 -463.38161 -463.38161 Loop time of 9.86272 on 1 procs for 1000 steps with 4000 atoms Performance: 8.760 ns/day, 2.740 hours/ns, 101.392 timesteps/s 50.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.3798 | 9.3798 | 9.3798 | 0.0 | 95.10 Neigh | 0.058319 | 0.058319 | 0.058319 | 0.0 | 0.59 Comm | 0.061035 | 0.061035 | 0.061035 | 0.0 | 0.62 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.3038 | 0.3038 | 0.3038 | 0.0 | 3.08 Other | | 0.05973 | | | 0.61 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5799 ave 5799 max 5799 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 255094 ave 255094 max 255094 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 255094 Ave neighs/atom = 63.7735 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.899847723116, Press = -0.379214839240765 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -7816.7547 -7816.7547 -7981.4414 -7981.4414 318.5977 318.5977 121467.64 121467.64 -463.38161 -463.38161 13000 -7821.561 -7821.561 -7984.4301 -7984.4301 315.08128 315.08128 121394.86 121394.86 -269.62221 -269.62221 Loop time of 9.82694 on 1 procs for 1000 steps with 4000 atoms Performance: 8.792 ns/day, 2.730 hours/ns, 101.761 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.2099 | 9.2099 | 9.2099 | 0.0 | 93.72 Neigh | 0.10194 | 0.10194 | 0.10194 | 0.0 | 1.04 Comm | 0.17179 | 0.17179 | 0.17179 | 0.0 | 1.75 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.30344 | 0.30344 | 0.30344 | 0.0 | 3.09 Other | | 0.03986 | | | 0.41 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5795 ave 5795 max 5795 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 254352 ave 254352 max 254352 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 254352 Ave neighs/atom = 63.588 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.914126835309, Press = -0.578002013942583 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -7821.561 -7821.561 -7984.4301 -7984.4301 315.08128 315.08128 121394.86 121394.86 -269.62221 -269.62221 14000 -7821.4326 -7821.4326 -7984.8741 -7984.8741 316.18863 316.18863 121268.79 121268.79 230.20471 230.20471 Loop time of 9.30759 on 1 procs for 1000 steps with 4000 atoms Performance: 9.283 ns/day, 2.585 hours/ns, 107.439 timesteps/s 52.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 8.844 | 8.844 | 8.844 | 0.0 | 95.02 Neigh | 0.07946 | 0.07946 | 0.07946 | 0.0 | 0.85 Comm | 0.061354 | 0.061354 | 0.061354 | 0.0 | 0.66 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.28317 | 0.28317 | 0.28317 | 0.0 | 3.04 Other | | 0.0396 | | | 0.43 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5782 ave 5782 max 5782 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 254646 ave 254646 max 254646 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 254646 Ave neighs/atom = 63.6615 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.906553840295, Press = -0.534455893001564 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -7821.4326 -7821.4326 -7984.8741 -7984.8741 316.18863 316.18863 121268.79 121268.79 230.20471 230.20471 15000 -7827.4577 -7827.4577 -7986.4958 -7986.4958 307.66986 307.66986 121381.96 121381.96 -385.25769 -385.25769 Loop time of 8.51713 on 1 procs for 1000 steps with 4000 atoms Performance: 10.144 ns/day, 2.366 hours/ns, 117.410 timesteps/s 57.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 8.1317 | 8.1317 | 8.1317 | 0.0 | 95.47 Neigh | 0.040855 | 0.040855 | 0.040855 | 0.0 | 0.48 Comm | 0.081177 | 0.081177 | 0.081177 | 0.0 | 0.95 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.2223 | 0.2223 | 0.2223 | 0.0 | 2.61 Other | | 0.04111 | | | 0.48 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5791 ave 5791 max 5791 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 254836 ave 254836 max 254836 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 254836 Ave neighs/atom = 63.709 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.899986220911, Press = -2.16280082752004 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -7827.4577 -7827.4577 -7986.4958 -7986.4958 307.66986 307.66986 121381.96 121381.96 -385.25769 -385.25769 16000 -7822.0123 -7822.0123 -7985.3486 -7985.3486 315.98509 315.98509 121258.5 121258.5 280.71599 280.71599 Loop time of 7.22755 on 1 procs for 1000 steps with 4000 atoms Performance: 11.954 ns/day, 2.008 hours/ns, 138.359 timesteps/s 69.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 6.8643 | 6.8643 | 6.8643 | 0.0 | 94.97 Neigh | 0.099117 | 0.099117 | 0.099117 | 0.0 | 1.37 Comm | 0.042045 | 0.042045 | 0.042045 | 0.0 | 0.58 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.1972 | 0.1972 | 0.1972 | 0.0 | 2.73 Other | | 0.02482 | | | 0.34 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5796 ave 5796 max 5796 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 255006 ave 255006 max 255006 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 255006 Ave neighs/atom = 63.7515 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.82813158533, Press = 1.34171626429004 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -7822.0123 -7822.0123 -7985.3486 -7985.3486 315.98509 315.98509 121258.5 121258.5 280.71599 280.71599 17000 -7817.844 -7817.844 -7980.4442 -7980.4442 314.56104 314.56104 121157.93 121157.93 1040.428 1040.428 Loop time of 8.04505 on 1 procs for 1000 steps with 4000 atoms Performance: 10.740 ns/day, 2.235 hours/ns, 124.300 timesteps/s 61.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 7.6184 | 7.6184 | 7.6184 | 0.0 | 94.70 Neigh | 0.061879 | 0.061879 | 0.061879 | 0.0 | 0.77 Comm | 0.07083 | 0.07083 | 0.07083 | 0.0 | 0.88 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.25434 | 0.25434 | 0.25434 | 0.0 | 3.16 Other | | 0.03954 | | | 0.49 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5793 ave 5793 max 5793 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 254468 ave 254468 max 254468 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 254468 Ave neighs/atom = 63.617 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.860689018403, Press = -0.214285090228248 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -7817.844 -7817.844 -7980.4442 -7980.4442 314.56104 314.56104 121157.93 121157.93 1040.428 1040.428 18000 -7822.5563 -7822.5563 -7985.4039 -7985.4039 315.03961 315.03961 121346.33 121346.33 -77.927718 -77.927718 Loop time of 8.95413 on 1 procs for 1000 steps with 4000 atoms Performance: 9.649 ns/day, 2.487 hours/ns, 111.680 timesteps/s 54.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 8.617 | 8.617 | 8.617 | 0.0 | 96.23 Neigh | 0.037639 | 0.037639 | 0.037639 | 0.0 | 0.42 Comm | 0.040593 | 0.040593 | 0.040593 | 0.0 | 0.45 Output | 6.9857e-05 | 6.9857e-05 | 6.9857e-05 | 0.0 | 0.00 Modify | 0.23934 | 0.23934 | 0.23934 | 0.0 | 2.67 Other | | 0.01949 | | | 0.22 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5824 ave 5824 max 5824 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 254304 ave 254304 max 254304 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 254304 Ave neighs/atom = 63.576 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.813625240209, Press = -1.40582876196941 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -7822.5563 -7822.5563 -7985.4039 -7985.4039 315.03961 315.03961 121346.33 121346.33 -77.927718 -77.927718 19000 -7817.7039 -7817.7039 -7982.447 -7982.447 318.70674 318.70674 121431.97 121431.97 -267.01279 -267.01279 Loop time of 7.48328 on 1 procs for 1000 steps with 4000 atoms Performance: 11.546 ns/day, 2.079 hours/ns, 133.631 timesteps/s 65.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 7.061 | 7.061 | 7.061 | 0.0 | 94.36 Neigh | 0.057907 | 0.057907 | 0.057907 | 0.0 | 0.77 Comm | 0.08118 | 0.08118 | 0.08118 | 0.0 | 1.08 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.26371 | 0.26371 | 0.26371 | 0.0 | 3.52 Other | | 0.01948 | | | 0.26 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5790 ave 5790 max 5790 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 254566 ave 254566 max 254566 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 254566 Ave neighs/atom = 63.6415 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.875776307151, Press = -0.283516077588713 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -7817.7039 -7817.7039 -7982.447 -7982.447 318.70674 318.70674 121431.97 121431.97 -267.01279 -267.01279 20000 -7821.1932 -7821.1932 -7983.2984 -7983.2984 313.6035 313.6035 121311.07 121311.07 -67.003768 -67.003768 Loop time of 7.97691 on 1 procs for 1000 steps with 4000 atoms Performance: 10.831 ns/day, 2.216 hours/ns, 125.362 timesteps/s 61.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 7.4902 | 7.4902 | 7.4902 | 0.0 | 93.90 Neigh | 0.08113 | 0.08113 | 0.08113 | 0.0 | 1.02 Comm | 0.061054 | 0.061054 | 0.061054 | 0.0 | 0.77 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.30493 | 0.30493 | 0.30493 | 0.0 | 3.82 Other | | 0.0396 | | | 0.50 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5790 ave 5790 max 5790 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 254572 ave 254572 max 254572 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 254572 Ave neighs/atom = 63.643 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.967609780801, Press = -0.837046759115499 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -7821.1932 -7821.1932 -7983.2984 -7983.2984 313.6035 313.6035 121311.07 121311.07 -67.003768 -67.003768 21000 -7818.5406 -7818.5406 -7981.9623 -7981.9623 316.15034 316.15034 121244.22 121244.22 459.28135 459.28135 Loop time of 9.40328 on 1 procs for 1000 steps with 4000 atoms Performance: 9.188 ns/day, 2.612 hours/ns, 106.346 timesteps/s 52.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 8.8658 | 8.8658 | 8.8658 | 0.0 | 94.28 Neigh | 0.082126 | 0.082126 | 0.082126 | 0.0 | 0.87 Comm | 0.1418 | 0.1418 | 0.1418 | 0.0 | 1.51 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.29368 | 0.29368 | 0.29368 | 0.0 | 3.12 Other | | 0.01981 | | | 0.21 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5786 ave 5786 max 5786 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 254864 ave 254864 max 254864 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 254864 Ave neighs/atom = 63.716 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.970426486139, Press = -0.678059302855923 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -7818.5406 -7818.5406 -7981.9623 -7981.9623 316.15034 316.15034 121244.22 121244.22 459.28135 459.28135 22000 -7819.2499 -7819.2499 -7982.3193 -7982.3193 315.46881 315.46881 121421.27 121421.27 -361.88206 -361.88206 Loop time of 9.24158 on 1 procs for 1000 steps with 4000 atoms Performance: 9.349 ns/day, 2.567 hours/ns, 108.207 timesteps/s 53.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 8.8799 | 8.8799 | 8.8799 | 0.0 | 96.09 Neigh | 0.076718 | 0.076718 | 0.076718 | 0.0 | 0.83 Comm | 0.061337 | 0.061337 | 0.061337 | 0.0 | 0.66 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.20389 | 0.20389 | 0.20389 | 0.0 | 2.21 Other | | 0.01974 | | | 0.21 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5788 ave 5788 max 5788 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 254368 ave 254368 max 254368 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 254368 Ave neighs/atom = 63.592 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.997473808792, Press = -1.18677506332692 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -7819.2499 -7819.2499 -7982.3193 -7982.3193 315.46881 315.46881 121421.27 121421.27 -361.88206 -361.88206 23000 -7819.1677 -7819.1677 -7982.2945 -7982.2945 315.5799 315.5799 121398.72 121398.72 -261.6975 -261.6975 Loop time of 8.44676 on 1 procs for 1000 steps with 4000 atoms Performance: 10.229 ns/day, 2.346 hours/ns, 118.389 timesteps/s 58.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 8.0571 | 8.0571 | 8.0571 | 0.0 | 95.39 Neigh | 0.025621 | 0.025621 | 0.025621 | 0.0 | 0.30 Comm | 0.080964 | 0.080964 | 0.080964 | 0.0 | 0.96 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.26347 | 0.26347 | 0.26347 | 0.0 | 3.12 Other | | 0.01958 | | | 0.23 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5789 ave 5789 max 5789 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 254874 ave 254874 max 254874 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 254874 Ave neighs/atom = 63.7185 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 121345.148487517 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0