# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.9497474655508995*${_u_distance} variable latticeconst_converted equal 4.9497474655508995*1 lattice fcc ${latticeconst_converted} lattice fcc 4.9497474655509 Lattice spacing in x,y,z = 4.9497475 4.9497475 4.9497475 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (49.497475 49.497475 49.497475) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.005 seconds variable mass_converted equal 207.2*${_u_mass} variable mass_converted equal 207.2*1 kim_interactions Pb #=== BEGIN kim_interactions ================================== pair_style kim MEAM_LAMMPS_EtesamiBaskesLaradji_2018_PbSn__MO_162736908871_000 pair_coeff * * Pb #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 207.2 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 121268.812771005 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.812771005/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.812771005/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.812771005/(1*1*${_u_distance}) variable V0_metal equal 121268.812771005/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 121268.812771005*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 121268.812771005 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 333.15*${_u_temperature} variable temp_converted equal 333.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 333.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "333.15 - 0.2" variable T_up equal "333.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -7987.791 -7987.791 -8160 -8160 333.15 333.15 121268.81 121268.81 1516.7921 1516.7921 1000 -7791.2991 -7791.2991 -7960.9426 -7960.9426 328.18676 328.18676 125457.09 125457.09 -960.79722 -960.79722 Loop time of 116.057 on 1 procs for 1000 steps with 4000 atoms Performance: 0.744 ns/day, 32.238 hours/ns, 8.616 timesteps/s 47.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 115.57 | 115.57 | 115.57 | 0.0 | 99.58 Neigh | 0.071696 | 0.071696 | 0.071696 | 0.0 | 0.06 Comm | 0.094503 | 0.094503 | 0.094503 | 0.0 | 0.08 Output | 5.28e-05 | 5.28e-05 | 5.28e-05 | 0.0 | 0.00 Modify | 0.28267 | 0.28267 | 0.28267 | 0.0 | 0.24 Other | | 0.038 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4884.00 ave 4884 max 4884 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218956.0 ave 218956 max 218956 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218956 Ave neighs/atom = 54.739000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -7791.2991 -7791.2991 -7960.9426 -7960.9426 328.18676 328.18676 125457.09 125457.09 -960.79722 -960.79722 2000 -7804.6866 -7804.6866 -7973.1729 -7973.1729 325.94833 325.94833 124974.11 124974.11 -112.05821 -112.05821 Loop time of 113.189 on 1 procs for 1000 steps with 4000 atoms Performance: 0.763 ns/day, 31.441 hours/ns, 8.835 timesteps/s 48.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 112.77 | 112.77 | 112.77 | 0.0 | 99.63 Neigh | 0.057701 | 0.057701 | 0.057701 | 0.0 | 0.05 Comm | 0.033981 | 0.033981 | 0.033981 | 0.0 | 0.03 Output | 4.96e-05 | 4.96e-05 | 4.96e-05 | 0.0 | 0.00 Modify | 0.28951 | 0.28951 | 0.28951 | 0.0 | 0.26 Other | | 0.03988 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4814.00 ave 4814 max 4814 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218614.0 ave 218614 max 218614 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218614 Ave neighs/atom = 54.653500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -7804.6866 -7804.6866 -7973.1729 -7973.1729 325.94833 325.94833 124974.11 124974.11 -112.05821 -112.05821 3000 -7804.392 -7804.392 -7976.3827 -7976.3827 332.72767 332.72767 124846.34 124846.34 114.34275 114.34275 Loop time of 115.197 on 1 procs for 1000 steps with 4000 atoms Performance: 0.750 ns/day, 31.999 hours/ns, 8.681 timesteps/s 47.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.63 | 114.63 | 114.63 | 0.0 | 99.51 Neigh | 0.077878 | 0.077878 | 0.077878 | 0.0 | 0.07 Comm | 0.10316 | 0.10316 | 0.10316 | 0.0 | 0.09 Output | 5.04e-05 | 5.04e-05 | 5.04e-05 | 0.0 | 0.00 Modify | 0.36671 | 0.36671 | 0.36671 | 0.0 | 0.32 Other | | 0.01754 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4811.00 ave 4811 max 4811 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218366.0 ave 218366 max 218366 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218366 Ave neighs/atom = 54.591500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -7804.392 -7804.392 -7976.3827 -7976.3827 332.72767 332.72767 124846.34 124846.34 114.34275 114.34275 4000 -7808.4264 -7808.4264 -7980.4595 -7980.4595 332.80968 332.80968 124870.35 124870.35 -169.63957 -169.63957 Loop time of 111.2 on 1 procs for 1000 steps with 4000 atoms Performance: 0.777 ns/day, 30.889 hours/ns, 8.993 timesteps/s 49.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.69 | 110.69 | 110.69 | 0.0 | 99.54 Neigh | 0.056443 | 0.056443 | 0.056443 | 0.0 | 0.05 Comm | 0.10342 | 0.10342 | 0.10342 | 0.0 | 0.09 Output | 4.84e-05 | 4.84e-05 | 4.84e-05 | 0.0 | 0.00 Modify | 0.32947 | 0.32947 | 0.32947 | 0.0 | 0.30 Other | | 0.01792 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4807.00 ave 4807 max 4807 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218392.0 ave 218392 max 218392 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218392 Ave neighs/atom = 54.598000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -7808.4264 -7808.4264 -7980.4595 -7980.4595 332.80968 332.80968 124870.35 124870.35 -169.63957 -169.63957 5000 -7804.6923 -7804.6923 -7976.6957 -7976.6957 332.75235 332.75235 124844.49 124844.49 254.37838 254.37838 Loop time of 114.737 on 1 procs for 1000 steps with 4000 atoms Performance: 0.753 ns/day, 31.871 hours/ns, 8.716 timesteps/s 47.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.14 | 114.14 | 114.14 | 0.0 | 99.48 Neigh | 0.11866 | 0.11866 | 0.11866 | 0.0 | 0.10 Comm | 0.073324 | 0.073324 | 0.073324 | 0.0 | 0.06 Output | 3.77e-05 | 3.77e-05 | 3.77e-05 | 0.0 | 0.00 Modify | 0.36315 | 0.36315 | 0.36315 | 0.0 | 0.32 Other | | 0.03757 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4744.00 ave 4744 max 4744 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218562.0 ave 218562 max 218562 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218562 Ave neighs/atom = 54.640500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 330.108245789552, Press = 351.715746781567 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -7804.6923 -7804.6923 -7976.6957 -7976.6957 332.75235 332.75235 124844.49 124844.49 254.37838 254.37838 6000 -7803.6815 -7803.6815 -7976.2781 -7976.2781 333.89988 333.89988 124797.19 124797.19 461.81284 461.81284 Loop time of 111.106 on 1 procs for 1000 steps with 4000 atoms Performance: 0.778 ns/day, 30.863 hours/ns, 9.000 timesteps/s 49.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.54 | 110.54 | 110.54 | 0.0 | 99.49 Neigh | 0.071351 | 0.071351 | 0.071351 | 0.0 | 0.06 Comm | 0.073656 | 0.073656 | 0.073656 | 0.0 | 0.07 Output | 3.2e-05 | 3.2e-05 | 3.2e-05 | 0.0 | 0.00 Modify | 0.35044 | 0.35044 | 0.35044 | 0.0 | 0.32 Other | | 0.06763 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4900.00 ave 4900 max 4900 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218334.0 ave 218334 max 218334 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218334 Ave neighs/atom = 54.583500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.718807673617, Press = 27.3183834478035 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -7803.6815 -7803.6815 -7976.2781 -7976.2781 333.89988 333.89988 124797.19 124797.19 461.81284 461.81284 7000 -7805.8183 -7805.8183 -7977.1593 -7977.1593 331.47079 331.47079 124779.4 124779.4 384.23075 384.23075 Loop time of 112.373 on 1 procs for 1000 steps with 4000 atoms Performance: 0.769 ns/day, 31.215 hours/ns, 8.899 timesteps/s 49.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 111.79 | 111.79 | 111.79 | 0.0 | 99.48 Neigh | 0.0969 | 0.0969 | 0.0969 | 0.0 | 0.09 Comm | 0.03442 | 0.03442 | 0.03442 | 0.0 | 0.03 Output | 3.64e-05 | 3.64e-05 | 3.64e-05 | 0.0 | 0.00 Modify | 0.43206 | 0.43206 | 0.43206 | 0.0 | 0.38 Other | | 0.01789 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4785.00 ave 4785 max 4785 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218474.0 ave 218474 max 218474 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218474 Ave neighs/atom = 54.618500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.430697656072, Press = 9.88927131901272 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -7805.8183 -7805.8183 -7977.1593 -7977.1593 331.47079 331.47079 124779.4 124779.4 384.23075 384.23075 8000 -7807.7714 -7807.7714 -7978.6087 -7978.6087 330.49629 330.49629 124758.78 124758.78 408.28335 408.28335 Loop time of 106.958 on 1 procs for 1000 steps with 4000 atoms Performance: 0.808 ns/day, 29.710 hours/ns, 9.349 timesteps/s 51.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 106.37 | 106.37 | 106.37 | 0.0 | 99.45 Neigh | 0.033331 | 0.033331 | 0.033331 | 0.0 | 0.03 Comm | 0.053371 | 0.053371 | 0.053371 | 0.0 | 0.05 Output | 3.4e-05 | 3.4e-05 | 3.4e-05 | 0.0 | 0.00 Modify | 0.48392 | 0.48392 | 0.48392 | 0.0 | 0.45 Other | | 0.01831 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4868.00 ave 4868 max 4868 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218526.0 ave 218526 max 218526 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218526 Ave neighs/atom = 54.631500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.433179705858, Press = 1.15413320788395 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -7807.7714 -7807.7714 -7978.6087 -7978.6087 330.49629 330.49629 124758.78 124758.78 408.28335 408.28335 9000 -7802.8041 -7802.8041 -7974.5027 -7974.5027 332.16251 332.16251 124908.3 124908.3 112.7307 112.7307 Loop time of 107.698 on 1 procs for 1000 steps with 4000 atoms Performance: 0.802 ns/day, 29.916 hours/ns, 9.285 timesteps/s 51.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 107.09 | 107.09 | 107.09 | 0.0 | 99.44 Neigh | 0.07673 | 0.07673 | 0.07673 | 0.0 | 0.07 Comm | 0.11485 | 0.11485 | 0.11485 | 0.0 | 0.11 Output | 3.56e-05 | 3.56e-05 | 3.56e-05 | 0.0 | 0.00 Modify | 0.39354 | 0.39354 | 0.39354 | 0.0 | 0.37 Other | | 0.01833 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4771.00 ave 4771 max 4771 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218296.0 ave 218296 max 218296 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218296 Ave neighs/atom = 54.574000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.400138293281, Press = 2.17478057499149 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -7802.8041 -7802.8041 -7974.5027 -7974.5027 332.16251 332.16251 124908.3 124908.3 112.7307 112.7307 10000 -7804.8138 -7804.8138 -7975.7745 -7975.7745 330.73505 330.73505 124775.26 124775.26 537.29328 537.29328 Loop time of 103.11 on 1 procs for 1000 steps with 4000 atoms Performance: 0.838 ns/day, 28.642 hours/ns, 9.698 timesteps/s 53.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 102.66 | 102.66 | 102.66 | 0.0 | 99.56 Neigh | 0.073069 | 0.073069 | 0.073069 | 0.0 | 0.07 Comm | 0.053591 | 0.053591 | 0.053591 | 0.0 | 0.05 Output | 2.87e-05 | 2.87e-05 | 2.87e-05 | 0.0 | 0.00 Modify | 0.286 | 0.286 | 0.286 | 0.0 | 0.28 Other | | 0.03797 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4823.00 ave 4823 max 4823 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218472.0 ave 218472 max 218472 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218472 Ave neighs/atom = 54.618000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.459517787524, Press = -0.284195527783402 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -7804.8138 -7804.8138 -7975.7745 -7975.7745 330.73505 330.73505 124775.26 124775.26 537.29328 537.29328 11000 -7805.4057 -7805.4057 -7979.3386 -7979.3386 336.48513 336.48513 124652.62 124652.62 806.96609 806.96609 Loop time of 106.424 on 1 procs for 1000 steps with 4000 atoms Performance: 0.812 ns/day, 29.562 hours/ns, 9.396 timesteps/s 51.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 105.98 | 105.98 | 105.98 | 0.0 | 99.58 Neigh | 0.08755 | 0.08755 | 0.08755 | 0.0 | 0.08 Comm | 0.053733 | 0.053733 | 0.053733 | 0.0 | 0.05 Output | 2.96e-05 | 2.96e-05 | 2.96e-05 | 0.0 | 0.00 Modify | 0.28682 | 0.28682 | 0.28682 | 0.0 | 0.27 Other | | 0.01791 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4813.00 ave 4813 max 4813 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218624.0 ave 218624 max 218624 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218624 Ave neighs/atom = 54.656000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.346017884485, Press = 3.23765191986943 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -7805.4057 -7805.4057 -7979.3386 -7979.3386 336.48513 336.48513 124652.62 124652.62 806.96609 806.96609 12000 -7808.0604 -7808.0604 -7979.9197 -7979.9197 332.4735 332.4735 124732.79 124732.79 464.70017 464.70017 Loop time of 104.302 on 1 procs for 1000 steps with 4000 atoms Performance: 0.828 ns/day, 28.973 hours/ns, 9.588 timesteps/s 52.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 103.76 | 103.76 | 103.76 | 0.0 | 99.48 Neigh | 0.099172 | 0.099172 | 0.099172 | 0.0 | 0.10 Comm | 0.053742 | 0.053742 | 0.053742 | 0.0 | 0.05 Output | 3.68e-05 | 3.68e-05 | 3.68e-05 | 0.0 | 0.00 Modify | 0.34773 | 0.34773 | 0.34773 | 0.0 | 0.33 Other | | 0.04568 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4756.00 ave 4756 max 4756 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218244.0 ave 218244 max 218244 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218244 Ave neighs/atom = 54.561000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.107094132327, Press = 0.50836637727976 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -7808.0604 -7808.0604 -7979.9197 -7979.9197 332.4735 332.4735 124732.79 124732.79 464.70017 464.70017 13000 -7800.002 -7800.002 -7973.6662 -7973.6662 335.96523 335.96523 124932.84 124932.84 131.99167 131.99167 Loop time of 105.668 on 1 procs for 1000 steps with 4000 atoms Performance: 0.818 ns/day, 29.352 hours/ns, 9.464 timesteps/s 51.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 105.3 | 105.3 | 105.3 | 0.0 | 99.65 Neigh | 0.035525 | 0.035525 | 0.035525 | 0.0 | 0.03 Comm | 0.033103 | 0.033103 | 0.033103 | 0.0 | 0.03 Output | 3.22e-05 | 3.22e-05 | 3.22e-05 | 0.0 | 0.00 Modify | 0.2835 | 0.2835 | 0.2835 | 0.0 | 0.27 Other | | 0.01765 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4835.00 ave 4835 max 4835 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218550.0 ave 218550 max 218550 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218550 Ave neighs/atom = 54.637500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.154646047259, Press = 1.22472294274942 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -7800.002 -7800.002 -7973.6662 -7973.6662 335.96523 335.96523 124932.84 124932.84 131.99167 131.99167 14000 -7808.4162 -7808.4162 -7979.5664 -7979.5664 331.10166 331.10166 124798.35 124798.35 204.9441 204.9441 Loop time of 104.056 on 1 procs for 1000 steps with 4000 atoms Performance: 0.830 ns/day, 28.904 hours/ns, 9.610 timesteps/s 52.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 103.57 | 103.57 | 103.57 | 0.0 | 99.54 Neigh | 0.05598 | 0.05598 | 0.05598 | 0.0 | 0.05 Comm | 0.074885 | 0.074885 | 0.074885 | 0.0 | 0.07 Output | 2.85e-05 | 2.85e-05 | 2.85e-05 | 0.0 | 0.00 Modify | 0.32744 | 0.32744 | 0.32744 | 0.0 | 0.31 Other | | 0.02286 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4738.00 ave 4738 max 4738 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218242.0 ave 218242 max 218242 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218242 Ave neighs/atom = 54.560500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.217894481246, Press = 1.37351378619474 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -7808.4162 -7808.4162 -7979.5664 -7979.5664 331.10166 331.10166 124798.35 124798.35 204.9441 204.9441 15000 -7809.8179 -7809.8179 -7979.3862 -7979.3862 328.0413 328.0413 124675.52 124675.52 671.13618 671.13618 Loop time of 103.378 on 1 procs for 1000 steps with 4000 atoms Performance: 0.836 ns/day, 28.716 hours/ns, 9.673 timesteps/s 52.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 102.96 | 102.96 | 102.96 | 0.0 | 99.60 Neigh | 0.057316 | 0.057316 | 0.057316 | 0.0 | 0.06 Comm | 0.032879 | 0.032879 | 0.032879 | 0.0 | 0.03 Output | 3.73e-05 | 3.73e-05 | 3.73e-05 | 0.0 | 0.00 Modify | 0.30732 | 0.30732 | 0.30732 | 0.0 | 0.30 Other | | 0.01775 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4801.00 ave 4801 max 4801 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218356.0 ave 218356 max 218356 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218356 Ave neighs/atom = 54.589000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.161959299721, Press = 0.593182522503892 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -7809.8179 -7809.8179 -7979.3862 -7979.3862 328.0413 328.0413 124675.52 124675.52 671.13618 671.13618 16000 -7806.6755 -7806.6755 -7981.0129 -7981.0129 337.26755 337.26755 124642.07 124642.07 697.9244 697.9244 Loop time of 97.7961 on 1 procs for 1000 steps with 4000 atoms Performance: 0.883 ns/day, 27.166 hours/ns, 10.225 timesteps/s 55.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 97.464 | 97.464 | 97.464 | 0.0 | 99.66 Neigh | 0.038343 | 0.038343 | 0.038343 | 0.0 | 0.04 Comm | 0.033555 | 0.033555 | 0.033555 | 0.0 | 0.03 Output | 3.66e-05 | 3.66e-05 | 3.66e-05 | 0.0 | 0.00 Modify | 0.24296 | 0.24296 | 0.24296 | 0.0 | 0.25 Other | | 0.01748 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4765.00 ave 4765 max 4765 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218438.0 ave 218438 max 218438 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218438 Ave neighs/atom = 54.609500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.140759697968, Press = 0.381048668528233 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -7806.6755 -7806.6755 -7981.0129 -7981.0129 337.26755 337.26755 124642.07 124642.07 697.9244 697.9244 17000 -7803.8605 -7803.8605 -7975.7454 -7975.7454 332.52291 332.52291 124807.06 124807.06 461.40342 461.40342 Loop time of 96.6447 on 1 procs for 1000 steps with 4000 atoms Performance: 0.894 ns/day, 26.846 hours/ns, 10.347 timesteps/s 56.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 96.3 | 96.3 | 96.3 | 0.0 | 99.64 Neigh | 0.051162 | 0.051162 | 0.051162 | 0.0 | 0.05 Comm | 0.033243 | 0.033243 | 0.033243 | 0.0 | 0.03 Output | 2.97e-05 | 2.97e-05 | 2.97e-05 | 0.0 | 0.00 Modify | 0.24215 | 0.24215 | 0.24215 | 0.0 | 0.25 Other | | 0.01766 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4762.00 ave 4762 max 4762 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218234.0 ave 218234 max 218234 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218234 Ave neighs/atom = 54.558500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.063717770322, Press = 0.633132405067738 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -7803.8605 -7803.8605 -7975.7454 -7975.7454 332.52291 332.52291 124807.06 124807.06 461.40342 461.40342 18000 -7807.8235 -7807.8235 -7977.1855 -7977.1855 327.64215 327.64215 124903.12 124903.12 -77.995468 -77.995468 Loop time of 86.2166 on 1 procs for 1000 steps with 4000 atoms Performance: 1.002 ns/day, 23.949 hours/ns, 11.599 timesteps/s 64.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 85.77 | 85.77 | 85.77 | 0.0 | 99.48 Neigh | 0.07743 | 0.07743 | 0.07743 | 0.0 | 0.09 Comm | 0.03866 | 0.03866 | 0.03866 | 0.0 | 0.04 Output | 3.71e-05 | 3.71e-05 | 3.71e-05 | 0.0 | 0.00 Modify | 0.2924 | 0.2924 | 0.2924 | 0.0 | 0.34 Other | | 0.03792 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4815.00 ave 4815 max 4815 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218404.0 ave 218404 max 218404 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218404 Ave neighs/atom = 54.601000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.000828373305, Press = 1.24615086455897 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -7807.8235 -7807.8235 -7977.1855 -7977.1855 327.64215 327.64215 124903.12 124903.12 -77.995468 -77.995468 19000 -7801.7815 -7801.7815 -7977.5816 -7977.5816 340.09715 340.09715 124818.29 124818.29 249.81852 249.81852 Loop time of 90.0559 on 1 procs for 1000 steps with 4000 atoms Performance: 0.959 ns/day, 25.016 hours/ns, 11.104 timesteps/s 61.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 89.598 | 89.598 | 89.598 | 0.0 | 99.49 Neigh | 0.057554 | 0.057554 | 0.057554 | 0.0 | 0.06 Comm | 0.033078 | 0.033078 | 0.033078 | 0.0 | 0.04 Output | 3.58e-05 | 3.58e-05 | 3.58e-05 | 0.0 | 0.00 Modify | 0.34914 | 0.34914 | 0.34914 | 0.0 | 0.39 Other | | 0.01764 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4739.00 ave 4739 max 4739 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218550.0 ave 218550 max 218550 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218550 Ave neighs/atom = 54.637500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.067904945001, Press = 0.317628638000999 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -7801.7815 -7801.7815 -7977.5816 -7977.5816 340.09715 340.09715 124818.29 124818.29 249.81852 249.81852 20000 -7799.5866 -7799.5866 -7973.9779 -7973.9779 337.37179 337.37179 125091.78 125091.78 -503.56161 -503.56161 Loop time of 80.0946 on 1 procs for 1000 steps with 4000 atoms Performance: 1.079 ns/day, 22.249 hours/ns, 12.485 timesteps/s 68.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 79.64 | 79.64 | 79.64 | 0.0 | 99.43 Neigh | 0.06358 | 0.06358 | 0.06358 | 0.0 | 0.08 Comm | 0.055606 | 0.055606 | 0.055606 | 0.0 | 0.07 Output | 3.55e-05 | 3.55e-05 | 3.55e-05 | 0.0 | 0.00 Modify | 0.26559 | 0.26559 | 0.26559 | 0.0 | 0.33 Other | | 0.07026 | | | 0.09 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4850.00 ave 4850 max 4850 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218382.0 ave 218382 max 218382 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218382 Ave neighs/atom = 54.595500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.122393366031, Press = -0.437101979067886 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -7799.5866 -7799.5866 -7973.9779 -7973.9779 337.37179 337.37179 125091.78 125091.78 -503.56161 -503.56161 21000 -7796.6632 -7796.6632 -7972.4352 -7972.4352 340.04285 340.04285 125182.37 125182.37 -709.47444 -709.47444 Loop time of 78.1076 on 1 procs for 1000 steps with 4000 atoms Performance: 1.106 ns/day, 21.697 hours/ns, 12.803 timesteps/s 70.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 77.742 | 77.742 | 77.742 | 0.0 | 99.53 Neigh | 0.072388 | 0.072388 | 0.072388 | 0.0 | 0.09 Comm | 0.053166 | 0.053166 | 0.053166 | 0.0 | 0.07 Output | 5.6e-05 | 5.6e-05 | 5.6e-05 | 0.0 | 0.00 Modify | 0.22276 | 0.22276 | 0.22276 | 0.0 | 0.29 Other | | 0.01768 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4758.00 ave 4758 max 4758 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218412.0 ave 218412 max 218412 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218412 Ave neighs/atom = 54.603000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.103341559914, Press = 0.621911477446514 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -7796.6632 -7796.6632 -7972.4352 -7972.4352 340.04285 340.04285 125182.37 125182.37 -709.47444 -709.47444 22000 -7801.7058 -7801.7058 -7976.5595 -7976.5595 338.2664 338.2664 125019.16 125019.16 -424.50242 -424.50242 Loop time of 77.5283 on 1 procs for 1000 steps with 4000 atoms Performance: 1.114 ns/day, 21.536 hours/ns, 12.899 timesteps/s 70.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 77.209 | 77.209 | 77.209 | 0.0 | 99.59 Neigh | 0.035606 | 0.035606 | 0.035606 | 0.0 | 0.05 Comm | 0.052735 | 0.052735 | 0.052735 | 0.0 | 0.07 Output | 3.79e-05 | 3.79e-05 | 3.79e-05 | 0.0 | 0.00 Modify | 0.21076 | 0.21076 | 0.21076 | 0.0 | 0.27 Other | | 0.01999 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4832.00 ave 4832 max 4832 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218416.0 ave 218416 max 218416 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218416 Ave neighs/atom = 54.604000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.157928747293, Press = 0.538462532772733 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -7801.7058 -7801.7058 -7976.5595 -7976.5595 338.2664 338.2664 125019.16 125019.16 -424.50242 -424.50242 23000 -7803.6249 -7803.6249 -7976.3396 -7976.3396 334.12833 334.12833 124930.16 124930.16 -52.519309 -52.519309 Loop time of 79.6443 on 1 procs for 1000 steps with 4000 atoms Performance: 1.085 ns/day, 22.123 hours/ns, 12.556 timesteps/s 68.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 79.275 | 79.275 | 79.275 | 0.0 | 99.54 Neigh | 0.053277 | 0.053277 | 0.053277 | 0.0 | 0.07 Comm | 0.052761 | 0.052761 | 0.052761 | 0.0 | 0.07 Output | 3.63e-05 | 3.63e-05 | 3.63e-05 | 0.0 | 0.00 Modify | 0.22582 | 0.22582 | 0.22582 | 0.0 | 0.28 Other | | 0.03755 | | | 0.05 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4836.00 ave 4836 max 4836 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218376.0 ave 218376 max 218376 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218376 Ave neighs/atom = 54.594000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.119000418701, Press = 0.451482811392901 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -7803.6249 -7803.6249 -7976.3396 -7976.3396 334.12833 334.12833 124930.16 124930.16 -52.519309 -52.519309 24000 -7802.5482 -7802.5482 -7974.0607 -7974.0607 331.8026 331.8026 125020.39 125020.39 -271.19195 -271.19195 Loop time of 77.9047 on 1 procs for 1000 steps with 4000 atoms Performance: 1.109 ns/day, 21.640 hours/ns, 12.836 timesteps/s 70.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 77.566 | 77.566 | 77.566 | 0.0 | 99.56 Neigh | 0.057541 | 0.057541 | 0.057541 | 0.0 | 0.07 Comm | 0.032644 | 0.032644 | 0.032644 | 0.0 | 0.04 Output | 2.71e-05 | 2.71e-05 | 2.71e-05 | 0.0 | 0.00 Modify | 0.23159 | 0.23159 | 0.23159 | 0.0 | 0.30 Other | | 0.01742 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4728.00 ave 4728 max 4728 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218566.0 ave 218566 max 218566 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218566 Ave neighs/atom = 54.641500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.117548892482, Press = 0.238844720297088 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -7802.5482 -7802.5482 -7974.0607 -7974.0607 331.8026 331.8026 125020.39 125020.39 -271.19195 -271.19195 25000 -7806.2561 -7806.2561 -7979.7824 -7979.7824 335.69843 335.69843 124705.77 124705.77 534.68052 534.68052 Loop time of 82.2507 on 1 procs for 1000 steps with 4000 atoms Performance: 1.050 ns/day, 22.847 hours/ns, 12.158 timesteps/s 66.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 81.8 | 81.8 | 81.8 | 0.0 | 99.45 Neigh | 0.052939 | 0.052939 | 0.052939 | 0.0 | 0.06 Comm | 0.06842 | 0.06842 | 0.06842 | 0.0 | 0.08 Output | 2.87e-05 | 2.87e-05 | 2.87e-05 | 0.0 | 0.00 Modify | 0.28212 | 0.28212 | 0.28212 | 0.0 | 0.34 Other | | 0.04753 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4807.00 ave 4807 max 4807 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218438.0 ave 218438 max 218438 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218438 Ave neighs/atom = 54.609500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T333.15.out" else "print 'not_converged' file output/vol_T333.15.out" print '${V}' file output/vol_T333.15.out 124883.708881401 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0