# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.9497474655508995*${_u_distance} variable latticeconst_converted equal 4.9497474655508995*1 lattice fcc ${latticeconst_converted} lattice fcc 4.9497474655509 Lattice spacing in x,y,z = 4.9497475 4.9497475 4.9497475 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (49.497475 49.497475 49.497475) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (49.497475 49.497475 49.497475) create_atoms CPU = 0.007 seconds variable mass_converted equal 207.2*${_u_mass} variable mass_converted equal 207.2*1 kim_interactions Pb WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Pb #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_EtesamiBaskesLaradji_2018_PbSn__MO_162736908871_001 pair_coeff * * Pb #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 207.2 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 121268.812771005 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.812771005/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.812771005/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.812771005/(1*1*${_u_distance}) variable V0_metal equal 121268.812771005/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 121268.812771005*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 121268.812771005 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_162736908871_001#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -7998.1292 -7998.1292 -8160 -8160 313.15 313.15 121268.81 121268.81 1425.7345 1425.7345 1000 -7815.0235 -7815.0235 -7974.5004 -7974.5004 308.51891 308.51891 125116.91 125116.91 -691.98361 -691.98361 Loop time of 263.039 on 1 procs for 1000 steps with 4000 atoms Performance: 0.328 ns/day, 73.066 hours/ns, 3.802 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 262.03 | 262.03 | 262.03 | 0.0 | 99.62 Neigh | 0.11731 | 0.11731 | 0.11731 | 0.0 | 0.04 Comm | 0.13628 | 0.13628 | 0.13628 | 0.0 | 0.05 Output | 0.00022245 | 0.00022245 | 0.00022245 | 0.0 | 0.00 Modify | 0.65683 | 0.65683 | 0.65683 | 0.0 | 0.25 Other | | 0.09503 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4914.00 ave 4914 max 4914 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218846.0 ave 218846 max 218846 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218846 Ave neighs/atom = 54.711500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -7815.0235 -7815.0235 -7974.5004 -7974.5004 308.51891 308.51891 125116.91 125116.91 -691.98361 -691.98361 2000 -7827.5715 -7827.5715 -7985.0112 -7985.0112 304.57787 304.57787 124717.26 124717.26 -23.416356 -23.416356 Loop time of 255.927 on 1 procs for 1000 steps with 4000 atoms Performance: 0.338 ns/day, 71.091 hours/ns, 3.907 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 254.91 | 254.91 | 254.91 | 0.0 | 99.60 Neigh | 0.15685 | 0.15685 | 0.15685 | 0.0 | 0.06 Comm | 0.12695 | 0.12695 | 0.12695 | 0.0 | 0.05 Output | 0.00024998 | 0.00024998 | 0.00024998 | 0.0 | 0.00 Modify | 0.63898 | 0.63898 | 0.63898 | 0.0 | 0.25 Other | | 0.09513 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4786.00 ave 4786 max 4786 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218568.0 ave 218568 max 218568 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218568 Ave neighs/atom = 54.642000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -7827.5715 -7827.5715 -7985.0112 -7985.0112 304.57787 304.57787 124717.26 124717.26 -23.416356 -23.416356 3000 -7826.2947 -7826.2947 -7987.4419 -7987.4419 311.75006 311.75006 124652.31 124652.31 4.9618451 4.9618451 Loop time of 256.782 on 1 procs for 1000 steps with 4000 atoms Performance: 0.336 ns/day, 71.328 hours/ns, 3.894 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 255.76 | 255.76 | 255.76 | 0.0 | 99.60 Neigh | 0.157 | 0.157 | 0.157 | 0.0 | 0.06 Comm | 0.12806 | 0.12806 | 0.12806 | 0.0 | 0.05 Output | 0.00021143 | 0.00021143 | 0.00021143 | 0.0 | 0.00 Modify | 0.64055 | 0.64055 | 0.64055 | 0.0 | 0.25 Other | | 0.09533 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4840.00 ave 4840 max 4840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218410.0 ave 218410 max 218410 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218410 Ave neighs/atom = 54.602500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -7826.2947 -7826.2947 -7987.4419 -7987.4419 311.75006 311.75006 124652.31 124652.31 4.9618451 4.9618451 4000 -7830.1115 -7830.1115 -7992.0583 -7992.0583 313.29695 313.29695 124669.59 124669.59 -280.24222 -280.24222 Loop time of 257.046 on 1 procs for 1000 steps with 4000 atoms Performance: 0.336 ns/day, 71.402 hours/ns, 3.890 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 256.07 | 256.07 | 256.07 | 0.0 | 99.62 Neigh | 0.11788 | 0.11788 | 0.11788 | 0.0 | 0.05 Comm | 0.12622 | 0.12622 | 0.12622 | 0.0 | 0.05 Output | 0.00026011 | 0.00026011 | 0.00026011 | 0.0 | 0.00 Modify | 0.64042 | 0.64042 | 0.64042 | 0.0 | 0.25 Other | | 0.09548 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4865.00 ave 4865 max 4865 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218210.0 ave 218210 max 218210 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218210 Ave neighs/atom = 54.552500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -7830.1115 -7830.1115 -7992.0583 -7992.0583 313.29695 313.29695 124669.59 124669.59 -280.24222 -280.24222 5000 -7825.243 -7825.243 -7987.4678 -7987.4678 313.83492 313.83492 124747.29 124747.29 -196.56716 -196.56716 Loop time of 255.943 on 1 procs for 1000 steps with 4000 atoms Performance: 0.338 ns/day, 71.095 hours/ns, 3.907 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 254.96 | 254.96 | 254.96 | 0.0 | 99.62 Neigh | 0.11738 | 0.11738 | 0.11738 | 0.0 | 0.05 Comm | 0.12612 | 0.12612 | 0.12612 | 0.0 | 0.05 Output | 0.00017632 | 0.00017632 | 0.00017632 | 0.0 | 0.00 Modify | 0.64288 | 0.64288 | 0.64288 | 0.0 | 0.25 Other | | 0.09552 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4859.00 ave 4859 max 4859 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218478.0 ave 218478 max 218478 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218478 Ave neighs/atom = 54.619500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 311.726458383239, Press = 179.88468498614 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -7825.243 -7825.243 -7987.4678 -7987.4678 313.83492 313.83492 124747.29 124747.29 -196.56716 -196.56716 6000 -7826.1421 -7826.1421 -7988.0654 -7988.0654 313.25161 313.25161 124771.23 124771.23 -288.89451 -288.89451 Loop time of 256.938 on 1 procs for 1000 steps with 4000 atoms Performance: 0.336 ns/day, 71.372 hours/ns, 3.892 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 255.9 | 255.9 | 255.9 | 0.0 | 99.59 Neigh | 0.15703 | 0.15703 | 0.15703 | 0.0 | 0.06 Comm | 0.127 | 0.127 | 0.127 | 0.0 | 0.05 Output | 0.00017804 | 0.00017804 | 0.00017804 | 0.0 | 0.00 Modify | 0.6633 | 0.6633 | 0.6633 | 0.0 | 0.26 Other | | 0.09491 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4851.00 ave 4851 max 4851 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218106.0 ave 218106 max 218106 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218106 Ave neighs/atom = 54.526500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.654461731012, Press = 16.7396901710876 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -7826.1421 -7826.1421 -7988.0654 -7988.0654 313.25161 313.25161 124771.23 124771.23 -288.89451 -288.89451 7000 -7828.2166 -7828.2166 -7990.8692 -7990.8692 314.6626 314.6626 124735.24 124735.24 -442.67303 -442.67303 Loop time of 257.114 on 1 procs for 1000 steps with 4000 atoms Performance: 0.336 ns/day, 71.420 hours/ns, 3.889 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 256.07 | 256.07 | 256.07 | 0.0 | 99.59 Neigh | 0.15698 | 0.15698 | 0.15698 | 0.0 | 0.06 Comm | 0.12661 | 0.12661 | 0.12661 | 0.0 | 0.05 Output | 0.00018029 | 0.00018029 | 0.00018029 | 0.0 | 0.00 Modify | 0.66436 | 0.66436 | 0.66436 | 0.0 | 0.26 Other | | 0.09534 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4800.00 ave 4800 max 4800 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218432.0 ave 218432 max 218432 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218432 Ave neighs/atom = 54.608000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.430960539548, Press = 5.94377844785227 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -7828.2166 -7828.2166 -7990.8692 -7990.8692 314.6626 314.6626 124735.24 124735.24 -442.67303 -442.67303 8000 -7831.9144 -7831.9144 -7992.9867 -7992.9867 311.6054 311.6054 124632.43 124632.43 -156.48814 -156.48814 Loop time of 256.749 on 1 procs for 1000 steps with 4000 atoms Performance: 0.337 ns/day, 71.319 hours/ns, 3.895 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 255.74 | 255.74 | 255.74 | 0.0 | 99.61 Neigh | 0.11791 | 0.11791 | 0.11791 | 0.0 | 0.05 Comm | 0.12671 | 0.12671 | 0.12671 | 0.0 | 0.05 Output | 0.00017789 | 0.00017789 | 0.00017789 | 0.0 | 0.00 Modify | 0.66458 | 0.66458 | 0.66458 | 0.0 | 0.26 Other | | 0.09546 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4861.00 ave 4861 max 4861 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218512.0 ave 218512 max 218512 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218512 Ave neighs/atom = 54.628000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.426443395898, Press = 1.09657708228607 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.229 | 4.229 | 4.229 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -7831.9144 -7831.9144 -7992.9867 -7992.9867 311.6054 311.6054 124632.43 124632.43 -156.48814 -156.48814 9000 -7830.1657 -7830.1657 -7990.906 -7990.906 310.96298 310.96298 124713.34 124713.34 -312.21367 -312.21367 Loop time of 257.703 on 1 procs for 1000 steps with 4000 atoms Performance: 0.335 ns/day, 71.584 hours/ns, 3.880 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 256.66 | 256.66 | 256.66 | 0.0 | 99.59 Neigh | 0.15714 | 0.15714 | 0.15714 | 0.0 | 0.06 Comm | 0.12885 | 0.12885 | 0.12885 | 0.0 | 0.05 Output | 0.00017782 | 0.00017782 | 0.00017782 | 0.0 | 0.00 Modify | 0.66345 | 0.66345 | 0.66345 | 0.0 | 0.26 Other | | 0.09636 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4830.00 ave 4830 max 4830 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218200.0 ave 218200 max 218200 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218200 Ave neighs/atom = 54.550000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.289400798543, Press = -1.56018750849633 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -7830.1657 -7830.1657 -7990.906 -7990.906 310.96298 310.96298 124713.34 124713.34 -312.21367 -312.21367 10000 -7826.7556 -7826.7556 -7989.7319 -7989.7319 315.28878 315.28878 124606.47 124606.47 200.02149 200.02149 Loop time of 257.104 on 1 procs for 1000 steps with 4000 atoms Performance: 0.336 ns/day, 71.418 hours/ns, 3.889 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 256.06 | 256.06 | 256.06 | 0.0 | 99.59 Neigh | 0.15669 | 0.15669 | 0.15669 | 0.0 | 0.06 Comm | 0.1278 | 0.1278 | 0.1278 | 0.0 | 0.05 Output | 0.0001767 | 0.0001767 | 0.0001767 | 0.0 | 0.00 Modify | 0.66411 | 0.66411 | 0.66411 | 0.0 | 0.26 Other | | 0.09473 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4817.00 ave 4817 max 4817 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218386.0 ave 218386 max 218386 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218386 Ave neighs/atom = 54.596500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.239186748048, Press = -0.723437060540369 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.229 | 4.229 | 4.229 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -7826.7556 -7826.7556 -7989.7319 -7989.7319 315.28878 315.28878 124606.47 124606.47 200.02149 200.02149 11000 -7829.6614 -7829.6614 -7991.2094 -7991.2094 312.52561 312.52561 124559.78 124559.78 211.8316 211.8316 Loop time of 256.568 on 1 procs for 1000 steps with 4000 atoms Performance: 0.337 ns/day, 71.269 hours/ns, 3.898 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 255.52 | 255.52 | 255.52 | 0.0 | 99.59 Neigh | 0.15672 | 0.15672 | 0.15672 | 0.0 | 0.06 Comm | 0.12868 | 0.12868 | 0.12868 | 0.0 | 0.05 Output | 0.00021968 | 0.00021968 | 0.00021968 | 0.0 | 0.00 Modify | 0.66278 | 0.66278 | 0.66278 | 0.0 | 0.26 Other | | 0.09513 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4878.00 ave 4878 max 4878 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218304.0 ave 218304 max 218304 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218304 Ave neighs/atom = 54.576000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.946342124433, Press = 2.19283193529522 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -7829.6614 -7829.6614 -7991.2094 -7991.2094 312.52561 312.52561 124559.78 124559.78 211.8316 211.8316 12000 -7825.8863 -7825.8863 -7990.0904 -7990.0904 317.66385 317.66385 124566.66 124566.66 250.56091 250.56091 Loop time of 257.223 on 1 procs for 1000 steps with 4000 atoms Performance: 0.336 ns/day, 71.451 hours/ns, 3.888 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 256.18 | 256.18 | 256.18 | 0.0 | 99.59 Neigh | 0.15683 | 0.15683 | 0.15683 | 0.0 | 0.06 Comm | 0.12727 | 0.12727 | 0.12727 | 0.0 | 0.05 Output | 0.00017685 | 0.00017685 | 0.00017685 | 0.0 | 0.00 Modify | 0.66322 | 0.66322 | 0.66322 | 0.0 | 0.26 Other | | 0.09529 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4877.00 ave 4877 max 4877 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218446.0 ave 218446 max 218446 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218446 Ave neighs/atom = 54.611500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.115202395013, Press = 3.49321514957908 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -7825.8863 -7825.8863 -7990.0904 -7990.0904 317.66385 317.66385 124566.66 124566.66 250.56091 250.56091 13000 -7825.8469 -7825.8469 -7990.86 -7990.86 319.22889 319.22889 124724.14 124724.14 -333.1316 -333.1316 Loop time of 256.302 on 1 procs for 1000 steps with 4000 atoms Performance: 0.337 ns/day, 71.195 hours/ns, 3.902 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 255.3 | 255.3 | 255.3 | 0.0 | 99.61 Neigh | 0.11778 | 0.11778 | 0.11778 | 0.0 | 0.05 Comm | 0.12707 | 0.12707 | 0.12707 | 0.0 | 0.05 Output | 0.00017693 | 0.00017693 | 0.00017693 | 0.0 | 0.00 Modify | 0.66355 | 0.66355 | 0.66355 | 0.0 | 0.26 Other | | 0.09641 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4882.00 ave 4882 max 4882 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218516.0 ave 218516 max 218516 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218516 Ave neighs/atom = 54.629000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.250260847879, Press = 2.21779721533173 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -7825.8469 -7825.8469 -7990.86 -7990.86 319.22889 319.22889 124724.14 124724.14 -333.1316 -333.1316 14000 -7825.2211 -7825.2211 -7988.5143 -7988.5143 315.90179 315.90179 124879.82 124879.82 -737.80833 -737.80833 Loop time of 257.095 on 1 procs for 1000 steps with 4000 atoms Performance: 0.336 ns/day, 71.415 hours/ns, 3.890 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 256.05 | 256.05 | 256.05 | 0.0 | 99.59 Neigh | 0.15723 | 0.15723 | 0.15723 | 0.0 | 0.06 Comm | 0.12853 | 0.12853 | 0.12853 | 0.0 | 0.05 Output | 0.00017931 | 0.00017931 | 0.00017931 | 0.0 | 0.00 Modify | 0.66734 | 0.66734 | 0.66734 | 0.0 | 0.26 Other | | 0.09581 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4777.00 ave 4777 max 4777 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218126.0 ave 218126 max 218126 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218126 Ave neighs/atom = 54.531500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.360724589989, Press = 0.152623546088205 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -7825.2211 -7825.2211 -7988.5143 -7988.5143 315.90179 315.90179 124879.82 124879.82 -737.80833 -737.80833 15000 -7826.3028 -7826.3028 -7988.9115 -7988.9115 314.57742 314.57742 124824.78 124824.78 -606.80104 -606.80104 Loop time of 257.599 on 1 procs for 1000 steps with 4000 atoms Performance: 0.335 ns/day, 71.555 hours/ns, 3.882 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 256.55 | 256.55 | 256.55 | 0.0 | 99.59 Neigh | 0.15751 | 0.15751 | 0.15751 | 0.0 | 0.06 Comm | 0.12848 | 0.12848 | 0.12848 | 0.0 | 0.05 Output | 0.00040755 | 0.00040755 | 0.00040755 | 0.0 | 0.00 Modify | 0.66743 | 0.66743 | 0.66743 | 0.0 | 0.26 Other | | 0.09623 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4872.00 ave 4872 max 4872 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218408.0 ave 218408 max 218408 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218408 Ave neighs/atom = 54.602000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.287804572937, Press = -0.951703540031793 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -7826.3028 -7826.3028 -7988.9115 -7988.9115 314.57742 314.57742 124824.78 124824.78 -606.80104 -606.80104 16000 -7827.7355 -7827.7355 -7991.1506 -7991.1506 316.13749 316.13749 124676.99 124676.99 -156.65902 -156.65902 Loop time of 260.758 on 1 procs for 1000 steps with 4000 atoms Performance: 0.331 ns/day, 72.433 hours/ns, 3.835 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 259.73 | 259.73 | 259.73 | 0.0 | 99.61 Neigh | 0.11797 | 0.11797 | 0.11797 | 0.0 | 0.05 Comm | 0.13051 | 0.13051 | 0.13051 | 0.0 | 0.05 Output | 0.00017987 | 0.00017987 | 0.00017987 | 0.0 | 0.00 Modify | 0.68413 | 0.68413 | 0.68413 | 0.0 | 0.26 Other | | 0.09685 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4824.00 ave 4824 max 4824 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218288.0 ave 218288 max 218288 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218288 Ave neighs/atom = 54.572000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.321029162115, Press = -0.613728879518134 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -7827.7355 -7827.7355 -7991.1506 -7991.1506 316.13749 316.13749 124676.99 124676.99 -156.65902 -156.65902 17000 -7826.7339 -7826.7339 -7989.5417 -7989.5417 314.96262 314.96262 124596.33 124596.33 226.24027 226.24027 Loop time of 280.243 on 1 procs for 1000 steps with 4000 atoms Performance: 0.308 ns/day, 77.845 hours/ns, 3.568 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 279.12 | 279.12 | 279.12 | 0.0 | 99.60 Neigh | 0.12492 | 0.12492 | 0.12492 | 0.0 | 0.04 Comm | 0.13756 | 0.13756 | 0.13756 | 0.0 | 0.05 Output | 0.00017804 | 0.00017804 | 0.00017804 | 0.0 | 0.00 Modify | 0.75841 | 0.75841 | 0.75841 | 0.0 | 0.27 Other | | 0.1008 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4741.00 ave 4741 max 4741 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218212.0 ave 218212 max 218212 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218212 Ave neighs/atom = 54.553000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.374070721344, Press = -0.111413263014027 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -7826.7339 -7826.7339 -7989.5417 -7989.5417 314.96262 314.96262 124596.33 124596.33 226.24027 226.24027 18000 -7828.4375 -7828.4375 -7993.1467 -7993.1467 318.64115 318.64115 124475.86 124475.86 420.74173 420.74173 Loop time of 259.05 on 1 procs for 1000 steps with 4000 atoms Performance: 0.334 ns/day, 71.958 hours/ns, 3.860 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 257.99 | 257.99 | 257.99 | 0.0 | 99.59 Neigh | 0.15805 | 0.15805 | 0.15805 | 0.0 | 0.06 Comm | 0.13102 | 0.13102 | 0.13102 | 0.0 | 0.05 Output | 0.00018019 | 0.00018019 | 0.00018019 | 0.0 | 0.00 Modify | 0.67354 | 0.67354 | 0.67354 | 0.0 | 0.26 Other | | 0.09533 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4872.00 ave 4872 max 4872 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218540.0 ave 218540 max 218540 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218540 Ave neighs/atom = 54.635000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 124653.344955317 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0