# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.9497474655508995*${_u_distance} variable latticeconst_converted equal 4.9497474655508995*1 lattice fcc ${latticeconst_converted} lattice fcc 4.9497474655509 Lattice spacing in x,y,z = 4.9497475 4.9497475 4.9497475 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (49.497475 49.497475 49.497475) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms using lattice units in orthogonal box = (0 0 0) to (49.497475 49.497475 49.497475) create_atoms CPU = 0.001 seconds variable mass_converted equal 207.2*${_u_mass} variable mass_converted equal 207.2*1 kim_interactions Pb WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Pb #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_EtesamiBaskesLaradji_2018_PbSn__MO_162736908871_002 pair_coeff * * Pb #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 207.2 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 121268.812771005 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.812771005/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.812771005/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.812771005/(1*1*${_u_distance}) variable V0_metal equal 121268.812771005/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 121268.812771005*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 121268.812771005 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_162736908871_002#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.236 | 4.236 | 4.236 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -7998.1292 -7998.1292 -8160 -8160 313.15 313.15 121268.81 121268.81 1425.7345 1425.7345 1000 -7815.0235 -7815.0235 -7974.5004 -7974.5004 308.51891 308.51891 125116.91 125116.91 -691.98361 -691.98361 Loop time of 48.3549 on 1 procs for 1000 steps with 4000 atoms Performance: 1.787 ns/day, 13.432 hours/ns, 20.680 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.18 | 48.18 | 48.18 | 0.0 | 99.64 Neigh | 0.025718 | 0.025718 | 0.025718 | 0.0 | 0.05 Comm | 0.019736 | 0.019736 | 0.019736 | 0.0 | 0.04 Output | 0.00014676 | 0.00014676 | 0.00014676 | 0.0 | 0.00 Modify | 0.11888 | 0.11888 | 0.11888 | 0.0 | 0.25 Other | | 0.01033 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4914 ave 4914 max 4914 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218846 ave 218846 max 218846 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218846 Ave neighs/atom = 54.7115 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -7815.0235 -7815.0235 -7974.5004 -7974.5004 308.51891 308.51891 125116.91 125116.91 -691.98361 -691.98361 2000 -7827.5715 -7827.5715 -7985.0112 -7985.0112 304.57787 304.57787 124717.26 124717.26 -23.416356 -23.416356 Loop time of 48.6798 on 1 procs for 1000 steps with 4000 atoms Performance: 1.775 ns/day, 13.522 hours/ns, 20.542 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.499 | 48.499 | 48.499 | 0.0 | 99.63 Neigh | 0.035148 | 0.035148 | 0.035148 | 0.0 | 0.07 Comm | 0.018902 | 0.018902 | 0.018902 | 0.0 | 0.04 Output | 7.6944e-05 | 7.6944e-05 | 7.6944e-05 | 0.0 | 0.00 Modify | 0.11717 | 0.11717 | 0.11717 | 0.0 | 0.24 Other | | 0.009846 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4786 ave 4786 max 4786 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218568 ave 218568 max 218568 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218568 Ave neighs/atom = 54.642 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -7827.5715 -7827.5715 -7985.0112 -7985.0112 304.57787 304.57787 124717.26 124717.26 -23.416356 -23.416356 3000 -7826.2947 -7826.2947 -7987.4419 -7987.4419 311.75006 311.75006 124652.31 124652.31 4.9618451 4.9618451 Loop time of 48.8106 on 1 procs for 1000 steps with 4000 atoms Performance: 1.770 ns/day, 13.558 hours/ns, 20.487 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.629 | 48.629 | 48.629 | 0.0 | 99.63 Neigh | 0.034905 | 0.034905 | 0.034905 | 0.0 | 0.07 Comm | 0.019043 | 0.019043 | 0.019043 | 0.0 | 0.04 Output | 8.9619e-05 | 8.9619e-05 | 8.9619e-05 | 0.0 | 0.00 Modify | 0.11728 | 0.11728 | 0.11728 | 0.0 | 0.24 Other | | 0.009847 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4840 ave 4840 max 4840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218410 ave 218410 max 218410 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218410 Ave neighs/atom = 54.6025 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -7826.2947 -7826.2947 -7987.4419 -7987.4419 311.75006 311.75006 124652.31 124652.31 4.9618451 4.9618451 4000 -7830.1115 -7830.1115 -7992.0583 -7992.0583 313.29695 313.29695 124669.59 124669.59 -280.24222 -280.24222 Loop time of 48.8953 on 1 procs for 1000 steps with 4000 atoms Performance: 1.767 ns/day, 13.582 hours/ns, 20.452 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.723 | 48.723 | 48.723 | 0.0 | 99.65 Neigh | 0.026223 | 0.026223 | 0.026223 | 0.0 | 0.05 Comm | 0.018952 | 0.018952 | 0.018952 | 0.0 | 0.04 Output | 5.7047e-05 | 5.7047e-05 | 5.7047e-05 | 0.0 | 0.00 Modify | 0.11719 | 0.11719 | 0.11719 | 0.0 | 0.24 Other | | 0.009866 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4865 ave 4865 max 4865 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218210 ave 218210 max 218210 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218210 Ave neighs/atom = 54.5525 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -7830.1115 -7830.1115 -7992.0583 -7992.0583 313.29695 313.29695 124669.59 124669.59 -280.24222 -280.24222 5000 -7825.243 -7825.243 -7987.4678 -7987.4678 313.83492 313.83492 124747.29 124747.29 -196.56716 -196.56716 Loop time of 48.6823 on 1 procs for 1000 steps with 4000 atoms Performance: 1.775 ns/day, 13.523 hours/ns, 20.541 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.509 | 48.509 | 48.509 | 0.0 | 99.64 Neigh | 0.026521 | 0.026521 | 0.026521 | 0.0 | 0.05 Comm | 0.01882 | 0.01882 | 0.01882 | 0.0 | 0.04 Output | 6.7477e-05 | 6.7477e-05 | 6.7477e-05 | 0.0 | 0.00 Modify | 0.11775 | 0.11775 | 0.11775 | 0.0 | 0.24 Other | | 0.009824 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4859 ave 4859 max 4859 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218478 ave 218478 max 218478 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218478 Ave neighs/atom = 54.6195 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 311.726458383239, Press = 179.88468498614 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -7825.243 -7825.243 -7987.4678 -7987.4678 313.83492 313.83492 124747.29 124747.29 -196.56716 -196.56716 6000 -7826.1421 -7826.1421 -7988.0654 -7988.0654 313.25161 313.25161 124771.23 124771.23 -288.89451 -288.89451 Loop time of 48.8322 on 1 procs for 1000 steps with 4000 atoms Performance: 1.769 ns/day, 13.564 hours/ns, 20.478 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.647 | 48.647 | 48.647 | 0.0 | 99.62 Neigh | 0.0349 | 0.0349 | 0.0349 | 0.0 | 0.07 Comm | 0.018968 | 0.018968 | 0.018968 | 0.0 | 0.04 Output | 7.3428e-05 | 7.3428e-05 | 7.3428e-05 | 0.0 | 0.00 Modify | 0.12121 | 0.12121 | 0.12121 | 0.0 | 0.25 Other | | 0.009903 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4851 ave 4851 max 4851 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218106 ave 218106 max 218106 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218106 Ave neighs/atom = 54.5265 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.654461731012, Press = 16.7396901710876 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -7826.1421 -7826.1421 -7988.0654 -7988.0654 313.25161 313.25161 124771.23 124771.23 -288.89451 -288.89451 7000 -7828.2166 -7828.2166 -7990.8692 -7990.8692 314.6626 314.6626 124735.24 124735.24 -442.67303 -442.67303 Loop time of 48.8635 on 1 procs for 1000 steps with 4000 atoms Performance: 1.768 ns/day, 13.573 hours/ns, 20.465 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.678 | 48.678 | 48.678 | 0.0 | 99.62 Neigh | 0.035386 | 0.035386 | 0.035386 | 0.0 | 0.07 Comm | 0.01879 | 0.01879 | 0.01879 | 0.0 | 0.04 Output | 5.6807e-05 | 5.6807e-05 | 5.6807e-05 | 0.0 | 0.00 Modify | 0.12097 | 0.12097 | 0.12097 | 0.0 | 0.25 Other | | 0.00986 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4800 ave 4800 max 4800 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218432 ave 218432 max 218432 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218432 Ave neighs/atom = 54.608 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.430960539548, Press = 5.94377844785227 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -7828.2166 -7828.2166 -7990.8692 -7990.8692 314.6626 314.6626 124735.24 124735.24 -442.67303 -442.67303 8000 -7831.9144 -7831.9144 -7992.9867 -7992.9867 311.6054 311.6054 124632.43 124632.43 -156.48814 -156.48814 Loop time of 48.7327 on 1 procs for 1000 steps with 4000 atoms Performance: 1.773 ns/day, 13.537 hours/ns, 20.520 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.557 | 48.557 | 48.557 | 0.0 | 99.64 Neigh | 0.02631 | 0.02631 | 0.02631 | 0.0 | 0.05 Comm | 0.018714 | 0.018714 | 0.018714 | 0.0 | 0.04 Output | 5.1327e-05 | 5.1327e-05 | 5.1327e-05 | 0.0 | 0.00 Modify | 0.12086 | 0.12086 | 0.12086 | 0.0 | 0.25 Other | | 0.009841 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4861 ave 4861 max 4861 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218512 ave 218512 max 218512 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218512 Ave neighs/atom = 54.628 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.426443395898, Press = 1.09657708228607 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.229 | 4.229 | 4.229 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -7831.9144 -7831.9144 -7992.9867 -7992.9867 311.6054 311.6054 124632.43 124632.43 -156.48814 -156.48814 9000 -7830.1657 -7830.1657 -7990.906 -7990.906 310.96298 310.96298 124713.34 124713.34 -312.21367 -312.21367 Loop time of 48.8477 on 1 procs for 1000 steps with 4000 atoms Performance: 1.769 ns/day, 13.569 hours/ns, 20.472 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.663 | 48.663 | 48.663 | 0.0 | 99.62 Neigh | 0.034861 | 0.034861 | 0.034861 | 0.0 | 0.07 Comm | 0.018929 | 0.018929 | 0.018929 | 0.0 | 0.04 Output | 4.1929e-05 | 4.1929e-05 | 4.1929e-05 | 0.0 | 0.00 Modify | 0.12095 | 0.12095 | 0.12095 | 0.0 | 0.25 Other | | 0.009832 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4830 ave 4830 max 4830 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218200 ave 218200 max 218200 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218200 Ave neighs/atom = 54.55 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.289400798543, Press = -1.56018750849633 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -7830.1657 -7830.1657 -7990.906 -7990.906 310.96298 310.96298 124713.34 124713.34 -312.21367 -312.21367 10000 -7826.7556 -7826.7556 -7989.7319 -7989.7319 315.28878 315.28878 124606.47 124606.47 200.02149 200.02149 Loop time of 48.812 on 1 procs for 1000 steps with 4000 atoms Performance: 1.770 ns/day, 13.559 hours/ns, 20.487 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.627 | 48.627 | 48.627 | 0.0 | 99.62 Neigh | 0.035044 | 0.035044 | 0.035044 | 0.0 | 0.07 Comm | 0.018865 | 0.018865 | 0.018865 | 0.0 | 0.04 Output | 6.898e-05 | 6.898e-05 | 6.898e-05 | 0.0 | 0.00 Modify | 0.1211 | 0.1211 | 0.1211 | 0.0 | 0.25 Other | | 0.009864 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4817 ave 4817 max 4817 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218386 ave 218386 max 218386 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218386 Ave neighs/atom = 54.5965 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.239186748048, Press = -0.723437060540369 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.229 | 4.229 | 4.229 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -7826.7556 -7826.7556 -7989.7319 -7989.7319 315.28878 315.28878 124606.47 124606.47 200.02149 200.02149 11000 -7829.6614 -7829.6614 -7991.2094 -7991.2094 312.52561 312.52561 124559.78 124559.78 211.8316 211.8316 Loop time of 48.6688 on 1 procs for 1000 steps with 4000 atoms Performance: 1.775 ns/day, 13.519 hours/ns, 20.547 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.484 | 48.484 | 48.484 | 0.0 | 99.62 Neigh | 0.034791 | 0.034791 | 0.034791 | 0.0 | 0.07 Comm | 0.01896 | 0.01896 | 0.01896 | 0.0 | 0.04 Output | 6.932e-05 | 6.932e-05 | 6.932e-05 | 0.0 | 0.00 Modify | 0.12094 | 0.12094 | 0.12094 | 0.0 | 0.25 Other | | 0.009841 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4878 ave 4878 max 4878 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218304 ave 218304 max 218304 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218304 Ave neighs/atom = 54.576 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.946342124433, Press = 2.19283193529522 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -7829.6614 -7829.6614 -7991.2094 -7991.2094 312.52561 312.52561 124559.78 124559.78 211.8316 211.8316 12000 -7825.8863 -7825.8863 -7990.0904 -7990.0904 317.66385 317.66385 124566.66 124566.66 250.56091 250.56091 Loop time of 48.8437 on 1 procs for 1000 steps with 4000 atoms Performance: 1.769 ns/day, 13.568 hours/ns, 20.473 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.659 | 48.659 | 48.659 | 0.0 | 99.62 Neigh | 0.035133 | 0.035133 | 0.035133 | 0.0 | 0.07 Comm | 0.01889 | 0.01889 | 0.01889 | 0.0 | 0.04 Output | 5.2468e-05 | 5.2468e-05 | 5.2468e-05 | 0.0 | 0.00 Modify | 0.12106 | 0.12106 | 0.12106 | 0.0 | 0.25 Other | | 0.009927 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4877 ave 4877 max 4877 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218446 ave 218446 max 218446 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218446 Ave neighs/atom = 54.6115 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.115202395013, Press = 3.49321514957908 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -7825.8863 -7825.8863 -7990.0904 -7990.0904 317.66385 317.66385 124566.66 124566.66 250.56091 250.56091 13000 -7825.8469 -7825.8469 -7990.86 -7990.86 319.22889 319.22889 124724.14 124724.14 -333.1316 -333.1316 Loop time of 48.6693 on 1 procs for 1000 steps with 4000 atoms Performance: 1.775 ns/day, 13.519 hours/ns, 20.547 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.493 | 48.493 | 48.493 | 0.0 | 99.64 Neigh | 0.026224 | 0.026224 | 0.026224 | 0.0 | 0.05 Comm | 0.018933 | 0.018933 | 0.018933 | 0.0 | 0.04 Output | 6.6715e-05 | 6.6715e-05 | 6.6715e-05 | 0.0 | 0.00 Modify | 0.12111 | 0.12111 | 0.12111 | 0.0 | 0.25 Other | | 0.009907 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4882 ave 4882 max 4882 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218516 ave 218516 max 218516 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218516 Ave neighs/atom = 54.629 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.250260847879, Press = 2.21779721533173 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -7825.8469 -7825.8469 -7990.86 -7990.86 319.22889 319.22889 124724.14 124724.14 -333.1316 -333.1316 14000 -7825.2211 -7825.2211 -7988.5143 -7988.5143 315.90179 315.90179 124879.82 124879.82 -737.80833 -737.80833 Loop time of 48.744 on 1 procs for 1000 steps with 4000 atoms Performance: 1.773 ns/day, 13.540 hours/ns, 20.515 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.559 | 48.559 | 48.559 | 0.0 | 99.62 Neigh | 0.035151 | 0.035151 | 0.035151 | 0.0 | 0.07 Comm | 0.019017 | 0.019017 | 0.019017 | 0.0 | 0.04 Output | 5.5434e-05 | 5.5434e-05 | 5.5434e-05 | 0.0 | 0.00 Modify | 0.12108 | 0.12108 | 0.12108 | 0.0 | 0.25 Other | | 0.009912 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4777 ave 4777 max 4777 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218126 ave 218126 max 218126 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218126 Ave neighs/atom = 54.5315 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.360724589989, Press = 0.152623546088205 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -7825.2211 -7825.2211 -7988.5143 -7988.5143 315.90179 315.90179 124879.82 124879.82 -737.80833 -737.80833 15000 -7826.3028 -7826.3028 -7988.9115 -7988.9115 314.57742 314.57742 124824.78 124824.78 -606.80104 -606.80104 Loop time of 48.7856 on 1 procs for 1000 steps with 4000 atoms Performance: 1.771 ns/day, 13.552 hours/ns, 20.498 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.601 | 48.601 | 48.601 | 0.0 | 99.62 Neigh | 0.035026 | 0.035026 | 0.035026 | 0.0 | 0.07 Comm | 0.018887 | 0.018887 | 0.018887 | 0.0 | 0.04 Output | 3.6939e-05 | 3.6939e-05 | 3.6939e-05 | 0.0 | 0.00 Modify | 0.12093 | 0.12093 | 0.12093 | 0.0 | 0.25 Other | | 0.009834 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4872 ave 4872 max 4872 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218408 ave 218408 max 218408 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218408 Ave neighs/atom = 54.602 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.287804572937, Press = -0.951703540031793 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -7826.3028 -7826.3028 -7988.9115 -7988.9115 314.57742 314.57742 124824.78 124824.78 -606.80104 -606.80104 16000 -7827.7355 -7827.7355 -7991.1506 -7991.1506 316.13749 316.13749 124676.99 124676.99 -156.65902 -156.65902 Loop time of 48.5817 on 1 procs for 1000 steps with 4000 atoms Performance: 1.778 ns/day, 13.495 hours/ns, 20.584 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.406 | 48.406 | 48.406 | 0.0 | 99.64 Neigh | 0.026196 | 0.026196 | 0.026196 | 0.0 | 0.05 Comm | 0.018894 | 0.018894 | 0.018894 | 0.0 | 0.04 Output | 7.1153e-05 | 7.1153e-05 | 7.1153e-05 | 0.0 | 0.00 Modify | 0.12104 | 0.12104 | 0.12104 | 0.0 | 0.25 Other | | 0.009879 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4824 ave 4824 max 4824 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218288 ave 218288 max 218288 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218288 Ave neighs/atom = 54.572 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.321029162115, Press = -0.613728879518134 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -7827.7355 -7827.7355 -7991.1506 -7991.1506 316.13749 316.13749 124676.99 124676.99 -156.65902 -156.65902 17000 -7826.7339 -7826.7339 -7989.5417 -7989.5417 314.96262 314.96262 124596.33 124596.33 226.24027 226.24027 Loop time of 48.8565 on 1 procs for 1000 steps with 4000 atoms Performance: 1.768 ns/day, 13.571 hours/ns, 20.468 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.68 | 48.68 | 48.68 | 0.0 | 99.64 Neigh | 0.026624 | 0.026624 | 0.026624 | 0.0 | 0.05 Comm | 0.018686 | 0.018686 | 0.018686 | 0.0 | 0.04 Output | 5.9722e-05 | 5.9722e-05 | 5.9722e-05 | 0.0 | 0.00 Modify | 0.12104 | 0.12104 | 0.12104 | 0.0 | 0.25 Other | | 0.009889 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4741 ave 4741 max 4741 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218212 ave 218212 max 218212 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218212 Ave neighs/atom = 54.553 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.374070721344, Press = -0.111413263014027 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.5 ghost atom cutoff = 7.5 binsize = 3.75, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.228 | 4.228 | 4.228 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -7826.7339 -7826.7339 -7989.5417 -7989.5417 314.96262 314.96262 124596.33 124596.33 226.24027 226.24027 18000 -7828.4375 -7828.4375 -7993.1467 -7993.1467 318.64115 318.64115 124475.86 124475.86 420.74173 420.74173 Loop time of 48.7751 on 1 procs for 1000 steps with 4000 atoms Performance: 1.771 ns/day, 13.549 hours/ns, 20.502 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.59 | 48.59 | 48.59 | 0.0 | 99.62 Neigh | 0.035061 | 0.035061 | 0.035061 | 0.0 | 0.07 Comm | 0.018984 | 0.018984 | 0.018984 | 0.0 | 0.04 Output | 5.0655e-05 | 5.0655e-05 | 5.0655e-05 | 0.0 | 0.00 Modify | 0.12105 | 0.12105 | 0.12105 | 0.0 | 0.25 Other | | 0.009748 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4872 ave 4872 max 4872 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 218540 ave 218540 max 218540 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 218540 Ave neighs/atom = 54.635 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 124653.344955317 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0