# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.94974747300148*${_u_distance} variable latticeconst_converted equal 4.94974747300148*1 lattice fcc ${latticeconst_converted} lattice fcc 4.94974747300148 Lattice spacing in x,y,z = 4.9497475 4.9497475 4.9497475 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (49.497475 49.497475 49.497475) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.001 seconds variable mass_converted equal 207.2*${_u_mass} variable mass_converted equal 207.2*1 kim_interactions Pb #=== BEGIN kim_interactions ================================== pair_style kim MEAM_LAMMPS_KimLee_2017_MgPb__MO_325675357262_000 pair_coeff * * Pb #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 207.2 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 121268.813318623 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.813318623/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.813318623/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.813318623/(1*1*${_u_distance}) variable V0_metal equal 121268.813318623/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 121268.813318623*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 121268.813318623 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 273.15*${_u_temperature} variable temp_converted equal 273.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 273.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "273.15 - 0.2" variable T_up equal "273.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -8018.8057 -8018.8057 -8160 -8160 273.15 273.15 121268.81 121268.81 1243.6198 1243.6198 1000 -7857.4259 -7857.4259 -8009.3237 -8009.3237 293.85647 293.85647 123984.96 123984.96 604.05811 604.05811 Loop time of 59.3803 on 1 procs for 1000 steps with 4000 atoms Performance: 1.455 ns/day, 16.495 hours/ns, 16.841 timesteps/s 98.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 59.17 | 59.17 | 59.17 | 0.0 | 99.64 Neigh | 0.017072 | 0.017072 | 0.017072 | 0.0 | 0.03 Comm | 0.034846 | 0.034846 | 0.034846 | 0.0 | 0.06 Output | 4.41e-05 | 4.41e-05 | 4.41e-05 | 0.0 | 0.00 Modify | 0.14249 | 0.14249 | 0.14249 | 0.0 | 0.24 Other | | 0.01638 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5837.00 ave 5837 max 5837 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282828.0 ave 282828 max 282828 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282828 Ave neighs/atom = 70.707000 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -7857.4259 -7857.4259 -8009.3237 -8009.3237 293.85647 293.85647 123984.96 123984.96 604.05811 604.05811 2000 -7869.1069 -7869.1069 -8011.1391 -8011.1391 274.77097 274.77097 124209.28 124209.28 -300.50729 -300.50729 Loop time of 56.7455 on 1 procs for 1000 steps with 4000 atoms Performance: 1.523 ns/day, 15.763 hours/ns, 17.623 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 56.528 | 56.528 | 56.528 | 0.0 | 99.62 Neigh | 0.028353 | 0.028353 | 0.028353 | 0.0 | 0.05 Comm | 0.034071 | 0.034071 | 0.034071 | 0.0 | 0.06 Output | 3.9e-05 | 3.9e-05 | 3.9e-05 | 0.0 | 0.00 Modify | 0.13938 | 0.13938 | 0.13938 | 0.0 | 0.25 Other | | 0.01587 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283762.0 ave 283762 max 283762 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283762 Ave neighs/atom = 70.940500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -7869.1069 -7869.1069 -8011.1391 -8011.1391 274.77097 274.77097 124209.28 124209.28 -300.50729 -300.50729 3000 -7863.2568 -7863.2568 -8006.4295 -8006.4295 276.97737 276.97737 124240.43 124240.43 -39.614926 -39.614926 Loop time of 57.8292 on 1 procs for 1000 steps with 4000 atoms Performance: 1.494 ns/day, 16.064 hours/ns, 17.292 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 57.608 | 57.608 | 57.608 | 0.0 | 99.62 Neigh | 0.02824 | 0.02824 | 0.02824 | 0.0 | 0.05 Comm | 0.034426 | 0.034426 | 0.034426 | 0.0 | 0.06 Output | 4.92e-05 | 4.92e-05 | 4.92e-05 | 0.0 | 0.00 Modify | 0.14198 | 0.14198 | 0.14198 | 0.0 | 0.25 Other | | 0.01611 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282864.0 ave 282864 max 282864 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282864 Ave neighs/atom = 70.716000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -7863.2568 -7863.2568 -8006.4295 -8006.4295 276.97737 276.97737 124240.43 124240.43 -39.614926 -39.614926 4000 -7871.5052 -7871.5052 -8009.3376 -8009.3376 266.64607 266.64607 124248.68 124248.68 -312.75523 -312.75523 Loop time of 58.9751 on 1 procs for 1000 steps with 4000 atoms Performance: 1.465 ns/day, 16.382 hours/ns, 16.956 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.755 | 58.755 | 58.755 | 0.0 | 99.63 Neigh | 0.025656 | 0.025656 | 0.025656 | 0.0 | 0.04 Comm | 0.0351 | 0.0351 | 0.0351 | 0.0 | 0.06 Output | 4.99e-05 | 4.99e-05 | 4.99e-05 | 0.0 | 0.00 Modify | 0.14302 | 0.14302 | 0.14302 | 0.0 | 0.24 Other | | 0.01642 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284302.0 ave 284302 max 284302 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284302 Ave neighs/atom = 71.075500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -7871.5052 -7871.5052 -8009.3376 -8009.3376 266.64607 266.64607 124248.68 124248.68 -312.75523 -312.75523 5000 -7865.6234 -7865.6234 -8010.5206 -8010.5206 280.31354 280.31354 124155.9 124155.9 36.119105 36.119105 Loop time of 108.646 on 1 procs for 1000 steps with 4000 atoms Performance: 0.795 ns/day, 30.179 hours/ns, 9.204 timesteps/s 61.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 108.25 | 108.25 | 108.25 | 0.0 | 99.63 Neigh | 0.080286 | 0.080286 | 0.080286 | 0.0 | 0.07 Comm | 0.059164 | 0.059164 | 0.059164 | 0.0 | 0.05 Output | 0.020085 | 0.020085 | 0.020085 | 0.0 | 0.02 Modify | 0.22075 | 0.22075 | 0.22075 | 0.0 | 0.20 Other | | 0.01812 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283530.0 ave 283530 max 283530 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283530 Ave neighs/atom = 70.882500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 280.731667932918, Press = -14.3689661697864 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -7865.6234 -7865.6234 -8010.5206 -8010.5206 280.31354 280.31354 124155.9 124155.9 36.119105 36.119105 6000 -7875.5915 -7875.5915 -8015.1607 -8015.1607 270.00624 270.00624 124095.85 124095.85 -109.65163 -109.65163 Loop time of 141.217 on 1 procs for 1000 steps with 4000 atoms Performance: 0.612 ns/day, 39.227 hours/ns, 7.081 timesteps/s 47.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 140.73 | 140.73 | 140.73 | 0.0 | 99.65 Neigh | 0.059778 | 0.059778 | 0.059778 | 0.0 | 0.04 Comm | 0.079173 | 0.079173 | 0.079173 | 0.0 | 0.06 Output | 3.55e-05 | 3.55e-05 | 3.55e-05 | 0.0 | 0.00 Modify | 0.33103 | 0.33103 | 0.33103 | 0.0 | 0.23 Other | | 0.01873 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284316.0 ave 284316 max 284316 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284316 Ave neighs/atom = 71.079000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.788725575037, Press = -3.99515067388895 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -7875.5915 -7875.5915 -8015.1607 -8015.1607 270.00624 270.00624 124095.85 124095.85 -109.65163 -109.65163 7000 -7872.2821 -7872.2821 -8013.6428 -8013.6428 273.47201 273.47201 124051.31 124051.31 143.12652 143.12652 Loop time of 140.003 on 1 procs for 1000 steps with 4000 atoms Performance: 0.617 ns/day, 38.890 hours/ns, 7.143 timesteps/s 48.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 139.44 | 139.44 | 139.44 | 0.0 | 99.60 Neigh | 0.10076 | 0.10076 | 0.10076 | 0.0 | 0.07 Comm | 0.11877 | 0.11877 | 0.11877 | 0.0 | 0.08 Output | 2.84e-05 | 2.84e-05 | 2.84e-05 | 0.0 | 0.00 Modify | 0.32137 | 0.32137 | 0.32137 | 0.0 | 0.23 Other | | 0.01816 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283542.0 ave 283542 max 283542 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283542 Ave neighs/atom = 70.885500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.315804815552, Press = -1.10418069944803 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -7872.2821 -7872.2821 -8013.6428 -8013.6428 273.47201 273.47201 124051.31 124051.31 143.12652 143.12652 8000 -7871.8795 -7871.8795 -8011.5072 -8011.5072 270.11922 270.11922 124166.68 124166.68 -128.38326 -128.38326 Loop time of 135.133 on 1 procs for 1000 steps with 4000 atoms Performance: 0.639 ns/day, 37.537 hours/ns, 7.400 timesteps/s 49.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.58 | 134.58 | 134.58 | 0.0 | 99.59 Neigh | 0.070129 | 0.070129 | 0.070129 | 0.0 | 0.05 Comm | 0.076886 | 0.076886 | 0.076886 | 0.0 | 0.06 Output | 3.59e-05 | 3.59e-05 | 3.59e-05 | 0.0 | 0.00 Modify | 0.38841 | 0.38841 | 0.38841 | 0.0 | 0.29 Other | | 0.01799 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284356.0 ave 284356 max 284356 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284356 Ave neighs/atom = 71.089000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.298037810803, Press = -1.59773027228753 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -7871.8795 -7871.8795 -8011.5072 -8011.5072 270.11922 270.11922 124166.68 124166.68 -128.38326 -128.38326 9000 -7876.2358 -7876.2358 -8013.734 -8013.734 265.99963 265.99963 124093.3 124093.3 -41.785752 -41.785752 Loop time of 139.672 on 1 procs for 1000 steps with 4000 atoms Performance: 0.619 ns/day, 38.798 hours/ns, 7.160 timesteps/s 48.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 139.13 | 139.13 | 139.13 | 0.0 | 99.62 Neigh | 0.050727 | 0.050727 | 0.050727 | 0.0 | 0.04 Comm | 0.0394 | 0.0394 | 0.0394 | 0.0 | 0.03 Output | 3.59e-05 | 3.59e-05 | 3.59e-05 | 0.0 | 0.00 Modify | 0.36839 | 0.36839 | 0.36839 | 0.0 | 0.26 Other | | 0.07836 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5837.00 ave 5837 max 5837 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284410.0 ave 284410 max 284410 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284410 Ave neighs/atom = 71.102500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.120578641168, Press = 4.13334547921446 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -7876.2358 -7876.2358 -8013.734 -8013.734 265.99963 265.99963 124093.3 124093.3 -41.785752 -41.785752 10000 -7871.1453 -7871.1453 -8013.4613 -8013.4613 275.31986 275.31986 124257.14 124257.14 -572.83913 -572.83913 Loop time of 141.88 on 1 procs for 1000 steps with 4000 atoms Performance: 0.609 ns/day, 39.411 hours/ns, 7.048 timesteps/s 47.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 141.26 | 141.26 | 141.26 | 0.0 | 99.56 Neigh | 0.052307 | 0.052307 | 0.052307 | 0.0 | 0.04 Comm | 0.059752 | 0.059752 | 0.059752 | 0.0 | 0.04 Output | 3.53e-05 | 3.53e-05 | 3.53e-05 | 0.0 | 0.00 Modify | 0.46753 | 0.46753 | 0.46753 | 0.0 | 0.33 Other | | 0.0383 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283390.0 ave 283390 max 283390 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283390 Ave neighs/atom = 70.847500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.395784017406, Press = -2.55674068540281 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -7871.1453 -7871.1453 -8013.4613 -8013.4613 275.31986 275.31986 124257.14 124257.14 -572.83913 -572.83913 11000 -7875.71 -7875.71 -8014.845 -8014.845 269.16612 269.16612 124023.62 124023.62 229.11589 229.11589 Loop time of 142.673 on 1 procs for 1000 steps with 4000 atoms Performance: 0.606 ns/day, 39.631 hours/ns, 7.009 timesteps/s 47.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 141.99 | 141.99 | 141.99 | 0.0 | 99.52 Neigh | 0.061601 | 0.061601 | 0.061601 | 0.0 | 0.04 Comm | 0.14099 | 0.14099 | 0.14099 | 0.0 | 0.10 Output | 3.58e-05 | 3.58e-05 | 3.58e-05 | 0.0 | 0.00 Modify | 0.43404 | 0.43404 | 0.43404 | 0.0 | 0.30 Other | | 0.04646 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284200.0 ave 284200 max 284200 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284200 Ave neighs/atom = 71.050000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.331485216846, Press = -0.486710322197712 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -7875.71 -7875.71 -8014.845 -8014.845 269.16612 269.16612 124023.62 124023.62 229.11589 229.11589 12000 -7867.7542 -7867.7542 -8011.9926 -8011.9926 279.03887 279.03887 124185.47 124185.47 -192.22913 -192.22913 Loop time of 141.416 on 1 procs for 1000 steps with 4000 atoms Performance: 0.611 ns/day, 39.282 hours/ns, 7.071 timesteps/s 47.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 140.81 | 140.81 | 140.81 | 0.0 | 99.57 Neigh | 0.072451 | 0.072451 | 0.072451 | 0.0 | 0.05 Comm | 0.078852 | 0.078852 | 0.078852 | 0.0 | 0.06 Output | 3.68e-05 | 3.68e-05 | 3.68e-05 | 0.0 | 0.00 Modify | 0.43672 | 0.43672 | 0.43672 | 0.0 | 0.31 Other | | 0.01816 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284398.0 ave 284398 max 284398 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284398 Ave neighs/atom = 71.099500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.311583459747, Press = 1.98104153041671 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -7867.7542 -7867.7542 -8011.9926 -8011.9926 279.03887 279.03887 124185.47 124185.47 -192.22913 -192.22913 13000 -7872.3373 -7872.3373 -8012.8878 -8012.8878 271.90446 271.90446 124069.03 124069.03 145.7 145.7 Loop time of 144.187 on 1 procs for 1000 steps with 4000 atoms Performance: 0.599 ns/day, 40.052 hours/ns, 6.935 timesteps/s 46.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 143.64 | 143.64 | 143.64 | 0.0 | 99.62 Neigh | 0.062141 | 0.062141 | 0.062141 | 0.0 | 0.04 Comm | 0.078841 | 0.078841 | 0.078841 | 0.0 | 0.05 Output | 3.44e-05 | 3.44e-05 | 3.44e-05 | 0.0 | 0.00 Modify | 0.39229 | 0.39229 | 0.39229 | 0.0 | 0.27 Other | | 0.01832 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5840.00 ave 5840 max 5840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283562.0 ave 283562 max 283562 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283562 Ave neighs/atom = 70.890500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.25726043907, Press = -2.65296278000548 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -7872.3373 -7872.3373 -8012.8878 -8012.8878 271.90446 271.90446 124069.03 124069.03 145.7 145.7 14000 -7874.2739 -7874.2739 -8011.8534 -8011.8534 266.15687 266.15687 124032.72 124032.72 365.52269 365.52269 Loop time of 141.867 on 1 procs for 1000 steps with 4000 atoms Performance: 0.609 ns/day, 39.407 hours/ns, 7.049 timesteps/s 47.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 141.18 | 141.18 | 141.18 | 0.0 | 99.52 Neigh | 0.10312 | 0.10312 | 0.10312 | 0.0 | 0.07 Comm | 0.11966 | 0.11966 | 0.11966 | 0.0 | 0.08 Output | 3.56e-05 | 3.56e-05 | 3.56e-05 | 0.0 | 0.00 Modify | 0.35145 | 0.35145 | 0.35145 | 0.0 | 0.25 Other | | 0.1081 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 285064.0 ave 285064 max 285064 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 285064 Ave neighs/atom = 71.266000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.269957186183, Press = 2.40033712219525 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -7874.2739 -7874.2739 -8011.8534 -8011.8534 266.15687 266.15687 124032.72 124032.72 365.52269 365.52269 15000 -7870.4068 -7870.4068 -8012.5812 -8012.5812 275.046 275.046 124153.73 124153.73 -130.56311 -130.56311 Loop time of 135.334 on 1 procs for 1000 steps with 4000 atoms Performance: 0.638 ns/day, 37.593 hours/ns, 7.389 timesteps/s 49.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.82 | 134.82 | 134.82 | 0.0 | 99.62 Neigh | 0.034034 | 0.034034 | 0.034034 | 0.0 | 0.03 Comm | 0.13918 | 0.13918 | 0.13918 | 0.0 | 0.10 Output | 3.71e-05 | 3.71e-05 | 3.71e-05 | 0.0 | 0.00 Modify | 0.30112 | 0.30112 | 0.30112 | 0.0 | 0.22 Other | | 0.04221 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284082.0 ave 284082 max 284082 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284082 Ave neighs/atom = 71.020500 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.270978331024, Press = -0.24300286992133 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -7870.4068 -7870.4068 -8012.5812 -8012.5812 275.046 275.046 124153.73 124153.73 -130.56311 -130.56311 16000 -7873.473 -7873.473 -8014.4567 -8014.4567 272.74264 272.74264 124030.49 124030.49 200.59446 200.59446 Loop time of 135.401 on 1 procs for 1000 steps with 4000 atoms Performance: 0.638 ns/day, 37.611 hours/ns, 7.385 timesteps/s 50.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.87 | 134.87 | 134.87 | 0.0 | 99.61 Neigh | 0.02765 | 0.02765 | 0.02765 | 0.0 | 0.02 Comm | 0.054877 | 0.054877 | 0.054877 | 0.0 | 0.04 Output | 3.62e-05 | 3.62e-05 | 3.62e-05 | 0.0 | 0.00 Modify | 0.43342 | 0.43342 | 0.43342 | 0.0 | 0.32 Other | | 0.01829 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284008.0 ave 284008 max 284008 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284008 Ave neighs/atom = 71.002000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.255841246626, Press = 0.571700472471238 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -7873.473 -7873.473 -8014.4567 -8014.4567 272.74264 272.74264 124030.49 124030.49 200.59446 200.59446 17000 -7873.4949 -7873.4949 -8016.0349 -8016.0349 275.75331 275.75331 124104.38 124104.38 -169.83104 -169.83104 Loop time of 134.065 on 1 procs for 1000 steps with 4000 atoms Performance: 0.644 ns/day, 37.240 hours/ns, 7.459 timesteps/s 50.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.62 | 133.62 | 133.62 | 0.0 | 99.67 Neigh | 0.070198 | 0.070198 | 0.070198 | 0.0 | 0.05 Comm | 0.03876 | 0.03876 | 0.03876 | 0.0 | 0.03 Output | 3.7e-05 | 3.7e-05 | 3.7e-05 | 0.0 | 0.00 Modify | 0.29955 | 0.29955 | 0.29955 | 0.0 | 0.22 Other | | 0.038 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284508.0 ave 284508 max 284508 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284508 Ave neighs/atom = 71.127000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.236318018962, Press = -0.365014253342189 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -7873.4949 -7873.4949 -8016.0349 -8016.0349 275.75331 275.75331 124104.38 124104.38 -169.83104 -169.83104 18000 -7870.9531 -7870.9531 -8013.9694 -8013.9694 276.67467 276.67467 124004.09 124004.09 376.41488 376.41488 Loop time of 135.037 on 1 procs for 1000 steps with 4000 atoms Performance: 0.640 ns/day, 37.510 hours/ns, 7.405 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.42 | 134.42 | 134.42 | 0.0 | 99.54 Neigh | 0.071772 | 0.071772 | 0.071772 | 0.0 | 0.05 Comm | 0.12155 | 0.12155 | 0.12155 | 0.0 | 0.09 Output | 3.76e-05 | 3.76e-05 | 3.76e-05 | 0.0 | 0.00 Modify | 0.36391 | 0.36391 | 0.36391 | 0.0 | 0.27 Other | | 0.06392 | | | 0.05 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284288.0 ave 284288 max 284288 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284288 Ave neighs/atom = 71.072000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.231738850077, Press = -0.499498797766928 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -7870.9531 -7870.9531 -8013.9694 -8013.9694 276.67467 276.67467 124004.09 124004.09 376.41488 376.41488 19000 -7871.4838 -7871.4838 -8012.7059 -8012.7059 273.2037 273.2037 124200.77 124200.77 -331.92189 -331.92189 Loop time of 136.322 on 1 procs for 1000 steps with 4000 atoms Performance: 0.634 ns/day, 37.867 hours/ns, 7.336 timesteps/s 49.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 135.82 | 135.82 | 135.82 | 0.0 | 99.63 Neigh | 0.090797 | 0.090797 | 0.090797 | 0.0 | 0.07 Comm | 0.15175 | 0.15175 | 0.15175 | 0.0 | 0.11 Output | 3.31e-05 | 3.31e-05 | 3.31e-05 | 0.0 | 0.00 Modify | 0.24274 | 0.24274 | 0.24274 | 0.0 | 0.18 Other | | 0.01837 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283872.0 ave 283872 max 283872 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283872 Ave neighs/atom = 70.968000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.200979432816, Press = 1.8692386313834 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -7871.4838 -7871.4838 -8012.7059 -8012.7059 273.2037 273.2037 124200.77 124200.77 -331.92189 -331.92189 20000 -7872.141 -7872.141 -8011.4477 -8011.4477 269.49826 269.49826 124215.31 124215.31 -319.76177 -319.76177 Loop time of 134.201 on 1 procs for 1000 steps with 4000 atoms Performance: 0.644 ns/day, 37.278 hours/ns, 7.452 timesteps/s 50.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.69 | 133.69 | 133.69 | 0.0 | 99.62 Neigh | 0.070943 | 0.070943 | 0.070943 | 0.0 | 0.05 Comm | 0.058885 | 0.058885 | 0.058885 | 0.0 | 0.04 Output | 2.84e-05 | 2.84e-05 | 2.84e-05 | 0.0 | 0.00 Modify | 0.36297 | 0.36297 | 0.36297 | 0.0 | 0.27 Other | | 0.01797 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283872.0 ave 283872 max 283872 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283872 Ave neighs/atom = 70.968000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.18181624906, Press = -1.55649624933914 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -7872.141 -7872.141 -8011.4477 -8011.4477 269.49826 269.49826 124215.31 124215.31 -319.76177 -319.76177 21000 -7873.3 -7873.3 -8014.6687 -8014.6687 273.48731 273.48731 124027.61 124027.61 259.58829 259.58829 Loop time of 133.267 on 1 procs for 1000 steps with 4000 atoms Performance: 0.648 ns/day, 37.018 hours/ns, 7.504 timesteps/s 50.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.69 | 132.69 | 132.69 | 0.0 | 99.56 Neigh | 0.040991 | 0.040991 | 0.040991 | 0.0 | 0.03 Comm | 0.11853 | 0.11853 | 0.11853 | 0.0 | 0.09 Output | 0.023086 | 0.023086 | 0.023086 | 0.0 | 0.02 Modify | 0.34147 | 0.34147 | 0.34147 | 0.0 | 0.26 Other | | 0.0564 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283064.0 ave 283064 max 283064 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283064 Ave neighs/atom = 70.766000 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.171317583939, Press = 0.611176820648498 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -7873.3 -7873.3 -8014.6687 -8014.6687 273.48731 273.48731 124027.61 124027.61 259.58829 259.58829 22000 -7873.7664 -7873.7664 -8015.3373 -8015.3373 273.87854 273.87854 124256.24 124256.24 -684.23815 -684.23815 Loop time of 129.935 on 1 procs for 1000 steps with 4000 atoms Performance: 0.665 ns/day, 36.093 hours/ns, 7.696 timesteps/s 51.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 129.42 | 129.42 | 129.42 | 0.0 | 99.61 Neigh | 0.052981 | 0.052981 | 0.052981 | 0.0 | 0.04 Comm | 0.058668 | 0.058668 | 0.058668 | 0.0 | 0.05 Output | 2.91e-05 | 2.91e-05 | 2.91e-05 | 0.0 | 0.00 Modify | 0.37176 | 0.37176 | 0.37176 | 0.0 | 0.29 Other | | 0.02819 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 285326.0 ave 285326 max 285326 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 285326 Ave neighs/atom = 71.331500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.132477877744, Press = -0.551112550239598 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -7873.7664 -7873.7664 -8015.3373 -8015.3373 273.87854 273.87854 124256.24 124256.24 -684.23815 -684.23815 23000 -7872.5792 -7872.5792 -8013.067 -8013.067 271.78312 271.78312 123946.47 123946.47 556.61239 556.61239 Loop time of 114.229 on 1 procs for 1000 steps with 4000 atoms Performance: 0.756 ns/day, 31.730 hours/ns, 8.754 timesteps/s 59.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.68 | 113.68 | 113.68 | 0.0 | 99.52 Neigh | 0.040902 | 0.040902 | 0.040902 | 0.0 | 0.04 Comm | 0.058465 | 0.058465 | 0.058465 | 0.0 | 0.05 Output | 2.86e-05 | 2.86e-05 | 2.86e-05 | 0.0 | 0.00 Modify | 0.43303 | 0.43303 | 0.43303 | 0.0 | 0.38 Other | | 0.01803 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283182.0 ave 283182 max 283182 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283182 Ave neighs/atom = 70.795500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T273.15.out" else "print 'not_converged' file output/vol_T273.15.out" print '${V}' file output/vol_T273.15.out 124101.540902514 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0