# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.94974747300148*${_u_distance} variable latticeconst_converted equal 4.94974747300148*1 lattice fcc ${latticeconst_converted} lattice fcc 4.94974747300148 Lattice spacing in x,y,z = 4.9497475 4.9497475 4.9497475 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (49.497475 49.497475 49.497475) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.001 seconds variable mass_converted equal 207.2*${_u_mass} variable mass_converted equal 207.2*1 kim_interactions Pb #=== BEGIN kim_interactions ================================== pair_style kim MEAM_LAMMPS_KimLee_2017_MgPb__MO_325675357262_000 pair_coeff * * Pb #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 207.2 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 121268.813318623 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.813318623/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.813318623/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.813318623/(1*1*${_u_distance}) variable V0_metal equal 121268.813318623/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 121268.813318623*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 121268.813318623 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -8008.4674 -8008.4674 -8160 -8160 293.15 293.15 121268.81 121268.81 1334.6774 1334.6774 1000 -7834.2109 -7834.2109 -7995.9777 -7995.9777 312.94893 312.94893 124266.03 124266.03 486.15973 486.15973 Loop time of 60.365 on 1 procs for 1000 steps with 4000 atoms Performance: 1.431 ns/day, 16.768 hours/ns, 16.566 timesteps/s 99.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.139 | 60.139 | 60.139 | 0.0 | 99.62 Neigh | 0.0298 | 0.0298 | 0.0298 | 0.0 | 0.05 Comm | 0.034951 | 0.034951 | 0.034951 | 0.0 | 0.06 Output | 4.4e-05 | 4.4e-05 | 4.4e-05 | 0.0 | 0.00 Modify | 0.14499 | 0.14499 | 0.14499 | 0.0 | 0.24 Other | | 0.01666 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5835.00 ave 5835 max 5835 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281048.0 ave 281048 max 281048 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281048 Ave neighs/atom = 70.262000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -7834.2109 -7834.2109 -7995.9777 -7995.9777 312.94893 312.94893 124266.03 124266.03 486.15973 486.15973 2000 -7847.4057 -7847.4057 -7999.0762 -7999.0762 293.41676 293.41676 124430.95 124430.95 -272.61391 -272.61391 Loop time of 55.3403 on 1 procs for 1000 steps with 4000 atoms Performance: 1.561 ns/day, 15.372 hours/ns, 18.070 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 55.126 | 55.126 | 55.126 | 0.0 | 99.61 Neigh | 0.025806 | 0.025806 | 0.025806 | 0.0 | 0.05 Comm | 0.033466 | 0.033466 | 0.033466 | 0.0 | 0.06 Output | 4.06e-05 | 4.06e-05 | 4.06e-05 | 0.0 | 0.00 Modify | 0.13865 | 0.13865 | 0.13865 | 0.0 | 0.25 Other | | 0.01592 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282552.0 ave 282552 max 282552 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282552 Ave neighs/atom = 70.638000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -7847.4057 -7847.4057 -7999.0762 -7999.0762 293.41676 293.41676 124430.95 124430.95 -272.61391 -272.61391 3000 -7842.0605 -7842.0605 -7994.7237 -7994.7237 295.33734 295.33734 124462.13 124462.13 -43.842641 -43.842641 Loop time of 55.5338 on 1 procs for 1000 steps with 4000 atoms Performance: 1.556 ns/day, 15.426 hours/ns, 18.007 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 55.317 | 55.317 | 55.317 | 0.0 | 99.61 Neigh | 0.028851 | 0.028851 | 0.028851 | 0.0 | 0.05 Comm | 0.033416 | 0.033416 | 0.033416 | 0.0 | 0.06 Output | 4.88e-05 | 4.88e-05 | 4.88e-05 | 0.0 | 0.00 Modify | 0.13831 | 0.13831 | 0.13831 | 0.0 | 0.25 Other | | 0.01591 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5836.00 ave 5836 max 5836 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281986.0 ave 281986 max 281986 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281986 Ave neighs/atom = 70.496500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -7842.0605 -7842.0605 -7994.7237 -7994.7237 295.33734 295.33734 124462.13 124462.13 -43.842641 -43.842641 4000 -7849.587 -7849.587 -7998.0781 -7998.0781 287.26617 287.26617 124429.88 124429.88 -170.41178 -170.41178 Loop time of 57.5525 on 1 procs for 1000 steps with 4000 atoms Performance: 1.501 ns/day, 15.987 hours/ns, 17.375 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 57.334 | 57.334 | 57.334 | 0.0 | 99.62 Neigh | 0.025849 | 0.025849 | 0.025849 | 0.0 | 0.04 Comm | 0.034423 | 0.034423 | 0.034423 | 0.0 | 0.06 Output | 6.55e-05 | 6.55e-05 | 6.55e-05 | 0.0 | 0.00 Modify | 0.14203 | 0.14203 | 0.14203 | 0.0 | 0.25 Other | | 0.01637 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282672.0 ave 282672 max 282672 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282672 Ave neighs/atom = 70.668000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -7849.587 -7849.587 -7998.0781 -7998.0781 287.26617 287.26617 124429.88 124429.88 -170.41178 -170.41178 5000 -7843.1528 -7843.1528 -7998.9826 -7998.9826 301.46333 301.46333 124416.19 124416.19 -111.11053 -111.11053 Loop time of 111.63 on 1 procs for 1000 steps with 4000 atoms Performance: 0.774 ns/day, 31.008 hours/ns, 8.958 timesteps/s 59.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 111.1 | 111.1 | 111.1 | 0.0 | 99.53 Neigh | 0.085396 | 0.085396 | 0.085396 | 0.0 | 0.08 Comm | 0.11498 | 0.11498 | 0.11498 | 0.0 | 0.10 Output | 3.3e-05 | 3.3e-05 | 3.3e-05 | 0.0 | 0.00 Modify | 0.28779 | 0.28779 | 0.28779 | 0.0 | 0.26 Other | | 0.03964 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5840.00 ave 5840 max 5840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281832.0 ave 281832 max 281832 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281832 Ave neighs/atom = 70.458000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 300.699468964989, Press = 72.8617343691112 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -7843.1528 -7843.1528 -7998.9826 -7998.9826 301.46333 301.46333 124416.19 124416.19 -111.11053 -111.11053 6000 -7853.5522 -7853.5522 -8004.4609 -8004.4609 291.94319 291.94319 124334.85 124334.85 -225.83003 -225.83003 Loop time of 141.906 on 1 procs for 1000 steps with 4000 atoms Performance: 0.609 ns/day, 39.418 hours/ns, 7.047 timesteps/s 47.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 141.41 | 141.41 | 141.41 | 0.0 | 99.65 Neigh | 0.071688 | 0.071688 | 0.071688 | 0.0 | 0.05 Comm | 0.11886 | 0.11886 | 0.11886 | 0.0 | 0.08 Output | 3.65e-05 | 3.65e-05 | 3.65e-05 | 0.0 | 0.00 Modify | 0.28251 | 0.28251 | 0.28251 | 0.0 | 0.20 Other | | 0.01813 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5840.00 ave 5840 max 5840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282680.0 ave 282680 max 282680 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282680 Ave neighs/atom = 70.670000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.872341138418, Press = -1.61603631545232 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -7853.5522 -7853.5522 -8004.4609 -8004.4609 291.94319 291.94319 124334.85 124334.85 -225.83003 -225.83003 7000 -7851.0608 -7851.0608 -8002.4238 -8002.4238 292.82211 292.82211 124270.83 124270.83 121.84823 121.84823 Loop time of 136.993 on 1 procs for 1000 steps with 4000 atoms Performance: 0.631 ns/day, 38.054 hours/ns, 7.300 timesteps/s 48.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 136.45 | 136.45 | 136.45 | 0.0 | 99.61 Neigh | 0.073715 | 0.073715 | 0.073715 | 0.0 | 0.05 Comm | 0.078082 | 0.078082 | 0.078082 | 0.0 | 0.06 Output | 3.55e-05 | 3.55e-05 | 3.55e-05 | 0.0 | 0.00 Modify | 0.34804 | 0.34804 | 0.34804 | 0.0 | 0.25 Other | | 0.03813 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5836.00 ave 5836 max 5836 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282390.0 ave 282390 max 282390 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282390 Ave neighs/atom = 70.597500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.339432730336, Press = -2.13528238078611 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -7851.0608 -7851.0608 -8002.4238 -8002.4238 292.82211 292.82211 124270.83 124270.83 121.84823 121.84823 8000 -7850.3042 -7850.3042 -8001.8516 -8001.8516 293.17889 293.17889 124331.95 124331.95 -52.199053 -52.199053 Loop time of 138.884 on 1 procs for 1000 steps with 4000 atoms Performance: 0.622 ns/day, 38.579 hours/ns, 7.200 timesteps/s 48.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 138.4 | 138.4 | 138.4 | 0.0 | 99.65 Neigh | 0.031128 | 0.031128 | 0.031128 | 0.0 | 0.02 Comm | 0.058626 | 0.058626 | 0.058626 | 0.0 | 0.04 Output | 3.54e-05 | 3.54e-05 | 3.54e-05 | 0.0 | 0.00 Modify | 0.37408 | 0.37408 | 0.37408 | 0.0 | 0.27 Other | | 0.01833 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5834.00 ave 5834 max 5834 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282704.0 ave 282704 max 282704 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282704 Ave neighs/atom = 70.676000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.313105477407, Press = 4.70058764802251 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -7850.3042 -7850.3042 -8001.8516 -8001.8516 293.17889 293.17889 124331.95 124331.95 -52.199053 -52.199053 9000 -7853.3873 -7853.3873 -8003.1638 -8003.1638 289.75265 289.75265 124289.43 124289.43 18.621126 18.621126 Loop time of 140.141 on 1 procs for 1000 steps with 4000 atoms Performance: 0.617 ns/day, 38.928 hours/ns, 7.136 timesteps/s 47.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 139.43 | 139.43 | 139.43 | 0.0 | 99.49 Neigh | 0.068165 | 0.068165 | 0.068165 | 0.0 | 0.05 Comm | 0.085426 | 0.085426 | 0.085426 | 0.0 | 0.06 Output | 3.5e-05 | 3.5e-05 | 3.5e-05 | 0.0 | 0.00 Modify | 0.42642 | 0.42642 | 0.42642 | 0.0 | 0.30 Other | | 0.1285 | | | 0.09 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5839.00 ave 5839 max 5839 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282518.0 ave 282518 max 282518 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282518 Ave neighs/atom = 70.629500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.222555440976, Press = 2.67995510434791 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -7853.3873 -7853.3873 -8003.1638 -8003.1638 289.75265 289.75265 124289.43 124289.43 18.621126 18.621126 10000 -7848.5634 -7848.5634 -8000.5827 -8000.5827 294.09159 294.09159 124332.38 124332.38 12.231141 12.231141 Loop time of 142.428 on 1 procs for 1000 steps with 4000 atoms Performance: 0.607 ns/day, 39.563 hours/ns, 7.021 timesteps/s 46.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 141.85 | 141.85 | 141.85 | 0.0 | 99.60 Neigh | 0.088607 | 0.088607 | 0.088607 | 0.0 | 0.06 Comm | 0.11858 | 0.11858 | 0.11858 | 0.0 | 0.08 Output | 3.47e-05 | 3.47e-05 | 3.47e-05 | 0.0 | 0.00 Modify | 0.34287 | 0.34287 | 0.34287 | 0.0 | 0.24 Other | | 0.02348 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5837.00 ave 5837 max 5837 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281328.0 ave 281328 max 281328 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281328 Ave neighs/atom = 70.332000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.055718561264, Press = 3.77695441660244 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -7848.5634 -7848.5634 -8000.5827 -8000.5827 294.09159 294.09159 124332.38 124332.38 12.231141 12.231141 11000 -7855.0483 -7855.0483 -8003.4837 -8003.4837 287.1583 287.1583 124516.89 124516.89 -876.94622 -876.94622 Loop time of 133.932 on 1 procs for 1000 steps with 4000 atoms Performance: 0.645 ns/day, 37.203 hours/ns, 7.466 timesteps/s 49.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.39 | 133.39 | 133.39 | 0.0 | 99.60 Neigh | 0.032607 | 0.032607 | 0.032607 | 0.0 | 0.02 Comm | 0.097961 | 0.097961 | 0.097961 | 0.0 | 0.07 Output | 6.71e-05 | 6.71e-05 | 6.71e-05 | 0.0 | 0.00 Modify | 0.34917 | 0.34917 | 0.34917 | 0.0 | 0.26 Other | | 0.05823 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281852.0 ave 281852 max 281852 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281852 Ave neighs/atom = 70.463000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.033154497225, Press = 1.49145975514438 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -7855.0483 -7855.0483 -8003.4837 -8003.4837 287.1583 287.1583 124516.89 124516.89 -876.94622 -876.94622 12000 -7848.1463 -7848.1463 -7998.8444 -7998.8444 291.53558 291.53558 124364.33 124364.33 14.386155 14.386155 Loop time of 140.038 on 1 procs for 1000 steps with 4000 atoms Performance: 0.617 ns/day, 38.899 hours/ns, 7.141 timesteps/s 47.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 139.46 | 139.46 | 139.46 | 0.0 | 99.59 Neigh | 0.099846 | 0.099846 | 0.099846 | 0.0 | 0.07 Comm | 0.075111 | 0.075111 | 0.075111 | 0.0 | 0.05 Output | 3.54e-05 | 3.54e-05 | 3.54e-05 | 0.0 | 0.00 Modify | 0.35562 | 0.35562 | 0.35562 | 0.0 | 0.25 Other | | 0.04821 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282130.0 ave 282130 max 282130 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282130 Ave neighs/atom = 70.532500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.956799310696, Press = -1.0765216771849 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -7848.1463 -7848.1463 -7998.8444 -7998.8444 291.53558 291.53558 124364.33 124364.33 14.386155 14.386155 13000 -7851.4487 -7851.4487 -8001.7026 -8001.7026 290.67632 290.67632 124213.39 124213.39 402.55972 402.55972 Loop time of 140.554 on 1 procs for 1000 steps with 4000 atoms Performance: 0.615 ns/day, 39.043 hours/ns, 7.115 timesteps/s 47.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 140.11 | 140.11 | 140.11 | 0.0 | 99.68 Neigh | 0.074741 | 0.074741 | 0.074741 | 0.0 | 0.05 Comm | 0.078179 | 0.078179 | 0.078179 | 0.0 | 0.06 Output | 3.54e-05 | 3.54e-05 | 3.54e-05 | 0.0 | 0.00 Modify | 0.27217 | 0.27217 | 0.27217 | 0.0 | 0.19 Other | | 0.01807 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5837.00 ave 5837 max 5837 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281732.0 ave 281732 max 281732 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281732 Ave neighs/atom = 70.433000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.0349255406, Press = 1.31523167030342 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -7851.4487 -7851.4487 -8001.7026 -8001.7026 290.67632 290.67632 124213.39 124213.39 402.55972 402.55972 14000 -7847.4174 -7847.4174 -8000.7389 -8000.7389 296.61086 296.61086 124470.79 124470.79 -456.19616 -456.19616 Loop time of 137.673 on 1 procs for 1000 steps with 4000 atoms Performance: 0.628 ns/day, 38.242 hours/ns, 7.264 timesteps/s 48.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 137.16 | 137.16 | 137.16 | 0.0 | 99.63 Neigh | 0.091312 | 0.091312 | 0.091312 | 0.0 | 0.07 Comm | 0.038093 | 0.038093 | 0.038093 | 0.0 | 0.03 Output | 2.83e-05 | 2.83e-05 | 2.83e-05 | 0.0 | 0.00 Modify | 0.36313 | 0.36313 | 0.36313 | 0.0 | 0.26 Other | | 0.01845 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5836.00 ave 5836 max 5836 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282036.0 ave 282036 max 282036 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282036 Ave neighs/atom = 70.509000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.925019240858, Press = 0.849007634449254 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -7847.4174 -7847.4174 -8000.7389 -8000.7389 296.61086 296.61086 124470.79 124470.79 -456.19616 -456.19616 15000 -7849.9025 -7849.9025 -8001.3655 -8001.3655 293.01529 293.01529 124315.61 124315.61 20.267048 20.267048 Loop time of 131.902 on 1 procs for 1000 steps with 4000 atoms Performance: 0.655 ns/day, 36.640 hours/ns, 7.581 timesteps/s 50.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 131.39 | 131.39 | 131.39 | 0.0 | 99.62 Neigh | 0.1038 | 0.1038 | 0.1038 | 0.0 | 0.08 Comm | 0.039083 | 0.039083 | 0.039083 | 0.0 | 0.03 Output | 4.62e-05 | 4.62e-05 | 4.62e-05 | 0.0 | 0.00 Modify | 0.3197 | 0.3197 | 0.3197 | 0.0 | 0.24 Other | | 0.04484 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281790.0 ave 281790 max 281790 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281790 Ave neighs/atom = 70.447500 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.98275076767, Press = -1.10951859567922 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -7849.9025 -7849.9025 -8001.3655 -8001.3655 293.01529 293.01529 124315.61 124315.61 20.267048 20.267048 16000 -7844.9406 -7844.9406 -8000.4679 -8000.4679 300.87815 300.87815 124224.3 124224.3 458.37194 458.37194 Loop time of 134.949 on 1 procs for 1000 steps with 4000 atoms Performance: 0.640 ns/day, 37.486 hours/ns, 7.410 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.41 | 134.41 | 134.41 | 0.0 | 99.60 Neigh | 0.11225 | 0.11225 | 0.11225 | 0.0 | 0.08 Comm | 0.058864 | 0.058864 | 0.058864 | 0.0 | 0.04 Output | 3.58e-05 | 3.58e-05 | 3.58e-05 | 0.0 | 0.00 Modify | 0.34913 | 0.34913 | 0.34913 | 0.0 | 0.26 Other | | 0.01839 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5833.00 ave 5833 max 5833 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282592.0 ave 282592 max 282592 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282592 Ave neighs/atom = 70.648000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.035166040988, Press = 0.64558694673066 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -7844.9406 -7844.9406 -8000.4679 -8000.4679 300.87815 300.87815 124224.3 124224.3 458.37194 458.37194 17000 -7856.2211 -7856.2211 -8003.5073 -8003.5073 284.93508 284.93508 124247.73 124247.73 108.17382 108.17382 Loop time of 131.194 on 1 procs for 1000 steps with 4000 atoms Performance: 0.659 ns/day, 36.443 hours/ns, 7.622 timesteps/s 50.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 130.63 | 130.63 | 130.63 | 0.0 | 99.57 Neigh | 0.090888 | 0.090888 | 0.090888 | 0.0 | 0.07 Comm | 0.11127 | 0.11127 | 0.11127 | 0.0 | 0.08 Output | 2.85e-05 | 2.85e-05 | 2.85e-05 | 0.0 | 0.00 Modify | 0.34767 | 0.34767 | 0.34767 | 0.0 | 0.27 Other | | 0.01823 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283240.0 ave 283240 max 283240 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283240 Ave neighs/atom = 70.810000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.951406797023, Press = 1.59095391906345 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -7856.2211 -7856.2211 -8003.5073 -8003.5073 284.93508 284.93508 124247.73 124247.73 108.17382 108.17382 18000 -7850.5558 -7850.5558 -8000.6517 -8000.6517 290.37083 290.37083 124459.98 124459.98 -431.70402 -431.70402 Loop time of 132.39 on 1 procs for 1000 steps with 4000 atoms Performance: 0.653 ns/day, 36.775 hours/ns, 7.553 timesteps/s 49.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 131.86 | 131.86 | 131.86 | 0.0 | 99.60 Neigh | 0.052993 | 0.052993 | 0.052993 | 0.0 | 0.04 Comm | 0.037971 | 0.037971 | 0.037971 | 0.0 | 0.03 Output | 3.41e-05 | 3.41e-05 | 3.41e-05 | 0.0 | 0.00 Modify | 0.42516 | 0.42516 | 0.42516 | 0.0 | 0.32 Other | | 0.01822 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282014.0 ave 282014 max 282014 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282014 Ave neighs/atom = 70.503500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.953199014173, Press = 1.3107624241271 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -7850.5558 -7850.5558 -8000.6517 -8000.6517 290.37083 290.37083 124459.98 124459.98 -431.70402 -431.70402 19000 -7853.2288 -7853.2288 -8003.8825 -8003.8825 291.44983 291.44983 124306.98 124306.98 -67.446397 -67.446397 Loop time of 133.432 on 1 procs for 1000 steps with 4000 atoms Performance: 0.648 ns/day, 37.064 hours/ns, 7.494 timesteps/s 49.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.76 | 132.76 | 132.76 | 0.0 | 99.50 Neigh | 0.089048 | 0.089048 | 0.089048 | 0.0 | 0.07 Comm | 0.095543 | 0.095543 | 0.095543 | 0.0 | 0.07 Output | 2.88e-05 | 2.88e-05 | 2.88e-05 | 0.0 | 0.00 Modify | 0.44748 | 0.44748 | 0.44748 | 0.0 | 0.34 Other | | 0.0384 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283030.0 ave 283030 max 283030 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283030 Ave neighs/atom = 70.757500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.937235470773, Press = -0.395260957892112 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -7853.2288 -7853.2288 -8003.8825 -8003.8825 291.44983 291.44983 124306.98 124306.98 -67.446397 -67.446397 20000 -7844.7996 -7844.7996 -7999.4726 -7999.4726 299.2254 299.2254 124313 124313 220.98291 220.98291 Loop time of 132.358 on 1 procs for 1000 steps with 4000 atoms Performance: 0.653 ns/day, 36.766 hours/ns, 7.555 timesteps/s 50.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 131.85 | 131.85 | 131.85 | 0.0 | 99.61 Neigh | 0.070798 | 0.070798 | 0.070798 | 0.0 | 0.05 Comm | 0.074102 | 0.074102 | 0.074102 | 0.0 | 0.06 Output | 3.55e-05 | 3.55e-05 | 3.55e-05 | 0.0 | 0.00 Modify | 0.30675 | 0.30675 | 0.30675 | 0.0 | 0.23 Other | | 0.05823 | | | 0.04 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5839.00 ave 5839 max 5839 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282136.0 ave 282136 max 282136 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282136 Ave neighs/atom = 70.534000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.976004916466, Press = 0.279337109665282 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -7844.7996 -7844.7996 -7999.4726 -7999.4726 299.2254 299.2254 124313 124313 220.98291 220.98291 21000 -7852.4202 -7852.4202 -8002.2663 -8002.2663 289.88741 289.88741 124277.57 124277.57 105.0078 105.0078 Loop time of 128.446 on 1 procs for 1000 steps with 4000 atoms Performance: 0.673 ns/day, 35.679 hours/ns, 7.785 timesteps/s 51.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.98 | 127.98 | 127.98 | 0.0 | 99.64 Neigh | 0.073063 | 0.073063 | 0.073063 | 0.0 | 0.06 Comm | 0.078411 | 0.078411 | 0.078411 | 0.0 | 0.06 Output | 6.19e-05 | 6.19e-05 | 6.19e-05 | 0.0 | 0.00 Modify | 0.29205 | 0.29205 | 0.29205 | 0.0 | 0.23 Other | | 0.01827 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5840.00 ave 5840 max 5840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281846.0 ave 281846 max 281846 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281846 Ave neighs/atom = 70.461500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.057640866045, Press = 1.06871089391257 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -7852.4202 -7852.4202 -8002.2663 -8002.2663 289.88741 289.88741 124277.57 124277.57 105.0078 105.0078 22000 -7853.4763 -7853.4763 -8001.3572 -8001.3572 286.08572 286.08572 124482.05 124482.05 -574.60679 -574.60679 Loop time of 127.124 on 1 procs for 1000 steps with 4000 atoms Performance: 0.680 ns/day, 35.312 hours/ns, 7.866 timesteps/s 52.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 126.71 | 126.71 | 126.71 | 0.0 | 99.67 Neigh | 0.075344 | 0.075344 | 0.075344 | 0.0 | 0.06 Comm | 0.0582 | 0.0582 | 0.0582 | 0.0 | 0.05 Output | 3.55e-05 | 3.55e-05 | 3.55e-05 | 0.0 | 0.00 Modify | 0.24224 | 0.24224 | 0.24224 | 0.0 | 0.19 Other | | 0.03833 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282860.0 ave 282860 max 282860 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282860 Ave neighs/atom = 70.715000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.066016032902, Press = 0.252987123426485 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -7853.4763 -7853.4763 -8001.3572 -8001.3572 286.08572 286.08572 124482.05 124482.05 -574.60679 -574.60679 23000 -7845.5878 -7845.5878 -7996.1399 -7996.1399 291.25325 291.25325 124520.36 124520.36 -345.29602 -345.29602 Loop time of 124.531 on 1 procs for 1000 steps with 4000 atoms Performance: 0.694 ns/day, 34.592 hours/ns, 8.030 timesteps/s 53.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 124.09 | 124.09 | 124.09 | 0.0 | 99.65 Neigh | 0.0528 | 0.0528 | 0.0528 | 0.0 | 0.04 Comm | 0.078999 | 0.078999 | 0.078999 | 0.0 | 0.06 Output | 2.85e-05 | 2.85e-05 | 2.85e-05 | 0.0 | 0.00 Modify | 0.28867 | 0.28867 | 0.28867 | 0.0 | 0.23 Other | | 0.01821 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5837.00 ave 5837 max 5837 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281986.0 ave 281986 max 281986 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281986 Ave neighs/atom = 70.496500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.092598600998, Press = -1.17863700346406 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -7845.5878 -7845.5878 -7996.1399 -7996.1399 291.25325 291.25325 124520.36 124520.36 -345.29602 -345.29602 24000 -7848.4531 -7848.4531 -7999.92 -7999.92 293.023 293.023 124220.02 124220.02 495.24596 495.24596 Loop time of 111.233 on 1 procs for 1000 steps with 4000 atoms Performance: 0.777 ns/day, 30.898 hours/ns, 8.990 timesteps/s 59.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.85 | 110.85 | 110.85 | 0.0 | 99.65 Neigh | 0.093152 | 0.093152 | 0.093152 | 0.0 | 0.08 Comm | 0.058169 | 0.058169 | 0.058169 | 0.0 | 0.05 Output | 3.7e-05 | 3.7e-05 | 3.7e-05 | 0.0 | 0.00 Modify | 0.21471 | 0.21471 | 0.21471 | 0.0 | 0.19 Other | | 0.01844 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841.00 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282334.0 ave 282334 max 282334 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282334 Ave neighs/atom = 70.583500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 124314.960118792 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0