# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.94974747300148*${_u_distance} variable latticeconst_converted equal 4.94974747300148*1 lattice fcc ${latticeconst_converted} lattice fcc 4.94974747300148 Lattice spacing in x,y,z = 4.9497475 4.9497475 4.9497475 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (49.497475 49.497475 49.497475) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms using lattice units in orthogonal box = (0 0 0) to (49.497475 49.497475 49.497475) create_atoms CPU = 0.001 seconds variable mass_converted equal 207.2*${_u_mass} variable mass_converted equal 207.2*1 kim_interactions Pb WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Pb #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_KimLee_2017_MgPb__MO_325675357262_002 pair_coeff * * Pb #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 207.2 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 121268.813318623 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.813318623/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.813318623/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.813318623/(1*1*${_u_distance}) variable V0_metal equal 121268.813318623/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 121268.813318623*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 121268.813318623 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 273.15*${_u_temperature} variable temp_converted equal 273.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 273.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "273.15 - 0.2" variable T_up equal "273.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_325675357262_002#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -8018.8057 -8018.8057 -8160 -8160 273.15 273.15 121268.81 121268.81 1243.6198 1243.6198 1000 -7857.4259 -7857.4259 -8009.3237 -8009.3237 293.85647 293.85647 123984.96 123984.96 604.05811 604.05811 Loop time of 59.7511 on 1 procs for 1000 steps with 4000 atoms Performance: 1.446 ns/day, 16.598 hours/ns, 16.736 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 59.578 | 59.578 | 59.578 | 0.0 | 99.71 Neigh | 0.022437 | 0.022437 | 0.022437 | 0.0 | 0.04 Comm | 0.022114 | 0.022114 | 0.022114 | 0.0 | 0.04 Output | 0.00013781 | 0.00013781 | 0.00013781 | 0.0 | 0.00 Modify | 0.11792 | 0.11792 | 0.11792 | 0.0 | 0.20 Other | | 0.01029 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5837 ave 5837 max 5837 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282828 ave 282828 max 282828 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282828 Ave neighs/atom = 70.707 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -7857.4259 -7857.4259 -8009.3237 -8009.3237 293.85647 293.85647 123984.96 123984.96 604.05811 604.05811 2000 -7869.1069 -7869.1069 -8011.1391 -8011.1391 274.77097 274.77097 124209.28 124209.28 -300.50729 -300.50729 Loop time of 60.6989 on 1 procs for 1000 steps with 4000 atoms Performance: 1.423 ns/day, 16.861 hours/ns, 16.475 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.516 | 60.516 | 60.516 | 0.0 | 99.70 Neigh | 0.033776 | 0.033776 | 0.033776 | 0.0 | 0.06 Comm | 0.021936 | 0.021936 | 0.021936 | 0.0 | 0.04 Output | 5.1957e-05 | 5.1957e-05 | 5.1957e-05 | 0.0 | 0.00 Modify | 0.11714 | 0.11714 | 0.11714 | 0.0 | 0.19 Other | | 0.01012 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283762 ave 283762 max 283762 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283762 Ave neighs/atom = 70.9405 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -7869.1069 -7869.1069 -8011.1391 -8011.1391 274.77097 274.77097 124209.28 124209.28 -300.50729 -300.50729 3000 -7863.2568 -7863.2568 -8006.4295 -8006.4295 276.97737 276.97737 124240.43 124240.43 -39.614926 -39.614926 Loop time of 60.7207 on 1 procs for 1000 steps with 4000 atoms Performance: 1.423 ns/day, 16.867 hours/ns, 16.469 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.538 | 60.538 | 60.538 | 0.0 | 99.70 Neigh | 0.033675 | 0.033675 | 0.033675 | 0.0 | 0.06 Comm | 0.021958 | 0.021958 | 0.021958 | 0.0 | 0.04 Output | 5.1937e-05 | 5.1937e-05 | 5.1937e-05 | 0.0 | 0.00 Modify | 0.11697 | 0.11697 | 0.11697 | 0.0 | 0.19 Other | | 0.0101 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282864 ave 282864 max 282864 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282864 Ave neighs/atom = 70.716 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -7863.2568 -7863.2568 -8006.4295 -8006.4295 276.97737 276.97737 124240.43 124240.43 -39.614926 -39.614926 4000 -7871.5052 -7871.5052 -8009.3376 -8009.3376 266.64607 266.64607 124248.68 124248.68 -312.75523 -312.75523 Loop time of 60.9612 on 1 procs for 1000 steps with 4000 atoms Performance: 1.417 ns/day, 16.934 hours/ns, 16.404 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.778 | 60.778 | 60.778 | 0.0 | 99.70 Neigh | 0.03361 | 0.03361 | 0.03361 | 0.0 | 0.06 Comm | 0.022077 | 0.022077 | 0.022077 | 0.0 | 0.04 Output | 5.2689e-05 | 5.2689e-05 | 5.2689e-05 | 0.0 | 0.00 Modify | 0.11707 | 0.11707 | 0.11707 | 0.0 | 0.19 Other | | 0.009962 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284302 ave 284302 max 284302 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284302 Ave neighs/atom = 71.0755 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -7871.5052 -7871.5052 -8009.3376 -8009.3376 266.64607 266.64607 124248.68 124248.68 -312.75523 -312.75523 5000 -7865.6234 -7865.6234 -8010.5206 -8010.5206 280.31354 280.31354 124155.9 124155.9 36.119105 36.119105 Loop time of 60.6094 on 1 procs for 1000 steps with 4000 atoms Performance: 1.426 ns/day, 16.836 hours/ns, 16.499 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.426 | 60.426 | 60.426 | 0.0 | 99.70 Neigh | 0.033553 | 0.033553 | 0.033553 | 0.0 | 0.06 Comm | 0.021956 | 0.021956 | 0.021956 | 0.0 | 0.04 Output | 4.0176e-05 | 4.0176e-05 | 4.0176e-05 | 0.0 | 0.00 Modify | 0.11739 | 0.11739 | 0.11739 | 0.0 | 0.19 Other | | 0.01002 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283530 ave 283530 max 283530 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283530 Ave neighs/atom = 70.8825 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 280.731667932919, Press = -14.3689661753636 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -7865.6234 -7865.6234 -8010.5206 -8010.5206 280.31354 280.31354 124155.9 124155.9 36.119105 36.119105 6000 -7875.5915 -7875.5915 -8015.1607 -8015.1607 270.00624 270.00624 124095.85 124095.85 -109.65163 -109.65163 Loop time of 60.9879 on 1 procs for 1000 steps with 4000 atoms Performance: 1.417 ns/day, 16.941 hours/ns, 16.397 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.801 | 60.801 | 60.801 | 0.0 | 99.69 Neigh | 0.033656 | 0.033656 | 0.033656 | 0.0 | 0.06 Comm | 0.022025 | 0.022025 | 0.022025 | 0.0 | 0.04 Output | 4.0115e-05 | 4.0115e-05 | 4.0115e-05 | 0.0 | 0.00 Modify | 0.12083 | 0.12083 | 0.12083 | 0.0 | 0.20 Other | | 0.01008 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284316 ave 284316 max 284316 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284316 Ave neighs/atom = 71.079 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.788725575037, Press = -3.99515067404208 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -7875.5915 -7875.5915 -8015.1607 -8015.1607 270.00624 270.00624 124095.85 124095.85 -109.65163 -109.65163 7000 -7872.2821 -7872.2821 -8013.6428 -8013.6428 273.47201 273.47201 124051.31 124051.31 143.12652 143.12652 Loop time of 60.8291 on 1 procs for 1000 steps with 4000 atoms Performance: 1.420 ns/day, 16.897 hours/ns, 16.439 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.643 | 60.643 | 60.643 | 0.0 | 99.69 Neigh | 0.033729 | 0.033729 | 0.033729 | 0.0 | 0.06 Comm | 0.02194 | 0.02194 | 0.02194 | 0.0 | 0.04 Output | 3.9794e-05 | 3.9794e-05 | 3.9794e-05 | 0.0 | 0.00 Modify | 0.12076 | 0.12076 | 0.12076 | 0.0 | 0.20 Other | | 0.01013 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283542 ave 283542 max 283542 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283542 Ave neighs/atom = 70.8855 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.315804815552, Press = -1.10418069973404 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -7872.2821 -7872.2821 -8013.6428 -8013.6428 273.47201 273.47201 124051.31 124051.31 143.12652 143.12652 8000 -7871.8795 -7871.8795 -8011.5072 -8011.5072 270.11922 270.11922 124166.68 124166.68 -128.38326 -128.38326 Loop time of 60.8242 on 1 procs for 1000 steps with 4000 atoms Performance: 1.420 ns/day, 16.896 hours/ns, 16.441 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.637 | 60.637 | 60.637 | 0.0 | 99.69 Neigh | 0.033748 | 0.033748 | 0.033748 | 0.0 | 0.06 Comm | 0.022097 | 0.022097 | 0.022097 | 0.0 | 0.04 Output | 3.9945e-05 | 3.9945e-05 | 3.9945e-05 | 0.0 | 0.00 Modify | 0.12088 | 0.12088 | 0.12088 | 0.0 | 0.20 Other | | 0.009986 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284356 ave 284356 max 284356 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284356 Ave neighs/atom = 71.089 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.298037810805, Press = -1.59773027224041 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -7871.8795 -7871.8795 -8011.5072 -8011.5072 270.11922 270.11922 124166.68 124166.68 -128.38326 -128.38326 9000 -7876.2358 -7876.2358 -8013.734 -8013.734 265.99963 265.99963 124093.3 124093.3 -41.785752 -41.785752 Loop time of 61.0154 on 1 procs for 1000 steps with 4000 atoms Performance: 1.416 ns/day, 16.949 hours/ns, 16.389 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.829 | 60.829 | 60.829 | 0.0 | 99.69 Neigh | 0.033739 | 0.033739 | 0.033739 | 0.0 | 0.06 Comm | 0.022156 | 0.022156 | 0.022156 | 0.0 | 0.04 Output | 4.0215e-05 | 4.0215e-05 | 4.0215e-05 | 0.0 | 0.00 Modify | 0.12089 | 0.12089 | 0.12089 | 0.0 | 0.20 Other | | 0.01004 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5837 ave 5837 max 5837 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284410 ave 284410 max 284410 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284410 Ave neighs/atom = 71.1025 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.120578641164, Press = 4.13334547886984 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -7876.2358 -7876.2358 -8013.734 -8013.734 265.99963 265.99963 124093.3 124093.3 -41.785752 -41.785752 10000 -7871.1453 -7871.1453 -8013.4613 -8013.4613 275.31986 275.31986 124257.14 124257.14 -572.83913 -572.83913 Loop time of 60.7241 on 1 procs for 1000 steps with 4000 atoms Performance: 1.423 ns/day, 16.868 hours/ns, 16.468 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.537 | 60.537 | 60.537 | 0.0 | 99.69 Neigh | 0.033671 | 0.033671 | 0.033671 | 0.0 | 0.06 Comm | 0.021954 | 0.021954 | 0.021954 | 0.0 | 0.04 Output | 3.9414e-05 | 3.9414e-05 | 3.9414e-05 | 0.0 | 0.00 Modify | 0.12074 | 0.12074 | 0.12074 | 0.0 | 0.20 Other | | 0.01018 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283390 ave 283390 max 283390 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283390 Ave neighs/atom = 70.8475 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.395784017446, Press = -2.55674068545993 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -7871.1453 -7871.1453 -8013.4613 -8013.4613 275.31986 275.31986 124257.14 124257.14 -572.83913 -572.83913 11000 -7875.71 -7875.71 -8014.845 -8014.845 269.16612 269.16612 124023.62 124023.62 229.11589 229.11589 Loop time of 61.068 on 1 procs for 1000 steps with 4000 atoms Performance: 1.415 ns/day, 16.963 hours/ns, 16.375 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.881 | 60.881 | 60.881 | 0.0 | 99.69 Neigh | 0.033661 | 0.033661 | 0.033661 | 0.0 | 0.06 Comm | 0.022136 | 0.022136 | 0.022136 | 0.0 | 0.04 Output | 3.9885e-05 | 3.9885e-05 | 3.9885e-05 | 0.0 | 0.00 Modify | 0.12093 | 0.12093 | 0.12093 | 0.0 | 0.20 Other | | 0.01002 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284200 ave 284200 max 284200 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284200 Ave neighs/atom = 71.05 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.331485216748, Press = -0.486710321945843 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -7875.71 -7875.71 -8014.845 -8014.845 269.16612 269.16612 124023.62 124023.62 229.11589 229.11589 12000 -7867.7542 -7867.7542 -8011.9926 -8011.9926 279.03887 279.03887 124185.47 124185.47 -192.22913 -192.22913 Loop time of 60.8745 on 1 procs for 1000 steps with 4000 atoms Performance: 1.419 ns/day, 16.910 hours/ns, 16.427 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.688 | 60.688 | 60.688 | 0.0 | 99.69 Neigh | 0.033638 | 0.033638 | 0.033638 | 0.0 | 0.06 Comm | 0.022021 | 0.022021 | 0.022021 | 0.0 | 0.04 Output | 3.9484e-05 | 3.9484e-05 | 3.9484e-05 | 0.0 | 0.00 Modify | 0.12089 | 0.12089 | 0.12089 | 0.0 | 0.20 Other | | 0.01003 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284398 ave 284398 max 284398 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284398 Ave neighs/atom = 71.0995 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.311583459899, Press = 1.98104153073469 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -7867.7542 -7867.7542 -8011.9926 -8011.9926 279.03887 279.03887 124185.47 124185.47 -192.22913 -192.22913 13000 -7872.3373 -7872.3373 -8012.8878 -8012.8878 271.90446 271.90446 124069.03 124069.03 145.7 145.7 Loop time of 60.8763 on 1 procs for 1000 steps with 4000 atoms Performance: 1.419 ns/day, 16.910 hours/ns, 16.427 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.678 | 60.678 | 60.678 | 0.0 | 99.67 Neigh | 0.044898 | 0.044898 | 0.044898 | 0.0 | 0.07 Comm | 0.022292 | 0.022292 | 0.022292 | 0.0 | 0.04 Output | 3.9775e-05 | 3.9775e-05 | 3.9775e-05 | 0.0 | 0.00 Modify | 0.12086 | 0.12086 | 0.12086 | 0.0 | 0.20 Other | | 0.009978 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5840 ave 5840 max 5840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283562 ave 283562 max 283562 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283562 Ave neighs/atom = 70.8905 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.257260439233, Press = -2.65296277929895 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -7872.3373 -7872.3373 -8012.8878 -8012.8878 271.90446 271.90446 124069.03 124069.03 145.7 145.7 14000 -7874.2739 -7874.2739 -8011.8534 -8011.8534 266.15687 266.15687 124032.72 124032.72 365.52269 365.52269 Loop time of 60.9768 on 1 procs for 1000 steps with 4000 atoms Performance: 1.417 ns/day, 16.938 hours/ns, 16.400 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.79 | 60.79 | 60.79 | 0.0 | 99.69 Neigh | 0.033658 | 0.033658 | 0.033658 | 0.0 | 0.06 Comm | 0.022002 | 0.022002 | 0.022002 | 0.0 | 0.04 Output | 6.9621e-05 | 6.9621e-05 | 6.9621e-05 | 0.0 | 0.00 Modify | 0.12082 | 0.12082 | 0.12082 | 0.0 | 0.20 Other | | 0.01015 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 285064 ave 285064 max 285064 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 285064 Ave neighs/atom = 71.266 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.269957187, Press = 2.40033712743278 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -7874.2739 -7874.2739 -8011.8534 -8011.8534 266.15687 266.15687 124032.72 124032.72 365.52269 365.52269 15000 -7870.4068 -7870.4068 -8012.5812 -8012.5812 275.046 275.046 124153.73 124153.73 -130.56306 -130.56306 Loop time of 60.9885 on 1 procs for 1000 steps with 4000 atoms Performance: 1.417 ns/day, 16.941 hours/ns, 16.397 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.813 | 60.813 | 60.813 | 0.0 | 99.71 Neigh | 0.022462 | 0.022462 | 0.022462 | 0.0 | 0.04 Comm | 0.021874 | 0.021874 | 0.021874 | 0.0 | 0.04 Output | 4.1969e-05 | 4.1969e-05 | 4.1969e-05 | 0.0 | 0.00 Modify | 0.12081 | 0.12081 | 0.12081 | 0.0 | 0.20 Other | | 0.01019 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284082 ave 284082 max 284082 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284082 Ave neighs/atom = 71.0205 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.27097851128, Press = -0.243002585731149 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -7870.4068 -7870.4068 -8012.5812 -8012.5812 275.046 275.046 124153.73 124153.73 -130.56306 -130.56306 16000 -7873.473 -7873.473 -8014.4567 -8014.4567 272.74264 272.74264 124030.49 124030.49 200.59446 200.59446 Loop time of 60.9327 on 1 procs for 1000 steps with 4000 atoms Performance: 1.418 ns/day, 16.926 hours/ns, 16.412 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.746 | 60.746 | 60.746 | 0.0 | 99.69 Neigh | 0.033603 | 0.033603 | 0.033603 | 0.0 | 0.06 Comm | 0.022017 | 0.022017 | 0.022017 | 0.0 | 0.04 Output | 4.0156e-05 | 4.0156e-05 | 4.0156e-05 | 0.0 | 0.00 Modify | 0.12086 | 0.12086 | 0.12086 | 0.0 | 0.20 Other | | 0.0101 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284008 ave 284008 max 284008 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284008 Ave neighs/atom = 71.002 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.255841530312, Press = 0.571700487987944 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -7873.473 -7873.473 -8014.4567 -8014.4567 272.74264 272.74264 124030.49 124030.49 200.59446 200.59446 17000 -7873.4949 -7873.4949 -8016.0349 -8016.0349 275.75331 275.75331 124104.38 124104.38 -169.83099 -169.83099 Loop time of 61.0631 on 1 procs for 1000 steps with 4000 atoms Performance: 1.415 ns/day, 16.962 hours/ns, 16.377 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.876 | 60.876 | 60.876 | 0.0 | 99.69 Neigh | 0.03362 | 0.03362 | 0.03362 | 0.0 | 0.06 Comm | 0.022173 | 0.022173 | 0.022173 | 0.0 | 0.04 Output | 3.9675e-05 | 3.9675e-05 | 3.9675e-05 | 0.0 | 0.00 Modify | 0.12087 | 0.12087 | 0.12087 | 0.0 | 0.20 Other | | 0.01002 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284508 ave 284508 max 284508 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284508 Ave neighs/atom = 71.127 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.236318194589, Press = -0.365013803397813 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -7873.4949 -7873.4949 -8016.0349 -8016.0349 275.75331 275.75331 124104.38 124104.38 -169.83099 -169.83099 18000 -7870.9531 -7870.9531 -8013.9695 -8013.9695 276.67482 276.67482 124004.09 124004.09 376.41606 376.41606 Loop time of 60.8801 on 1 procs for 1000 steps with 4000 atoms Performance: 1.419 ns/day, 16.911 hours/ns, 16.426 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.693 | 60.693 | 60.693 | 0.0 | 99.69 Neigh | 0.033717 | 0.033717 | 0.033717 | 0.0 | 0.06 Comm | 0.022074 | 0.022074 | 0.022074 | 0.0 | 0.04 Output | 3.9694e-05 | 3.9694e-05 | 3.9694e-05 | 0.0 | 0.00 Modify | 0.12094 | 0.12094 | 0.12094 | 0.0 | 0.20 Other | | 0.009983 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 284288 ave 284288 max 284288 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 284288 Ave neighs/atom = 71.072 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.23173903412, Press = -0.499497833754559 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -7870.9531 -7870.9531 -8013.9695 -8013.9695 276.67482 276.67482 124004.09 124004.09 376.41606 376.41606 19000 -7871.4838 -7871.4838 -8012.7059 -8012.7059 273.20369 273.20369 124200.77 124200.77 -331.91937 -331.91937 Loop time of 61.0185 on 1 procs for 1000 steps with 4000 atoms Performance: 1.416 ns/day, 16.950 hours/ns, 16.388 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.832 | 60.832 | 60.832 | 0.0 | 99.69 Neigh | 0.033703 | 0.033703 | 0.033703 | 0.0 | 0.06 Comm | 0.022077 | 0.022077 | 0.022077 | 0.0 | 0.04 Output | 4.1077e-05 | 4.1077e-05 | 4.1077e-05 | 0.0 | 0.00 Modify | 0.12087 | 0.12087 | 0.12087 | 0.0 | 0.20 Other | | 0.01004 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283872 ave 283872 max 283872 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283872 Ave neighs/atom = 70.968 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.200978463516, Press = 1.86924413921081 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -7871.4838 -7871.4838 -8012.7059 -8012.7059 273.20369 273.20369 124200.77 124200.77 -331.91937 -331.91937 20000 -7872.1411 -7872.1411 -8011.4478 -8011.4478 269.49818 269.49818 124215.31 124215.31 -319.76421 -319.76421 Loop time of 60.983 on 1 procs for 1000 steps with 4000 atoms Performance: 1.417 ns/day, 16.940 hours/ns, 16.398 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.796 | 60.796 | 60.796 | 0.0 | 99.69 Neigh | 0.033653 | 0.033653 | 0.033653 | 0.0 | 0.06 Comm | 0.022082 | 0.022082 | 0.022082 | 0.0 | 0.04 Output | 3.9754e-05 | 3.9754e-05 | 3.9754e-05 | 0.0 | 0.00 Modify | 0.12092 | 0.12092 | 0.12092 | 0.0 | 0.20 Other | | 0.01001 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283872 ave 283872 max 283872 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283872 Ave neighs/atom = 70.968 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.181815366202, Press = -1.55649767088986 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -7872.1411 -7872.1411 -8011.4478 -8011.4478 269.49818 269.49818 124215.31 124215.31 -319.76421 -319.76421 21000 -7873.3 -7873.3 -8014.6687 -8014.6687 273.48729 273.48729 124027.61 124027.61 259.58874 259.58874 Loop time of 60.7637 on 1 procs for 1000 steps with 4000 atoms Performance: 1.422 ns/day, 16.879 hours/ns, 16.457 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.588 | 60.588 | 60.588 | 0.0 | 99.71 Neigh | 0.022387 | 0.022387 | 0.022387 | 0.0 | 0.04 Comm | 0.022049 | 0.022049 | 0.022049 | 0.0 | 0.04 Output | 4.2019e-05 | 4.2019e-05 | 4.2019e-05 | 0.0 | 0.00 Modify | 0.12098 | 0.12098 | 0.12098 | 0.0 | 0.20 Other | | 0.01002 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283064 ave 283064 max 283064 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283064 Ave neighs/atom = 70.766 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.171317378132, Press = 0.611174631260874 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -7873.3 -7873.3 -8014.6687 -8014.6687 273.48729 273.48729 124027.61 124027.61 259.58874 259.58874 22000 -7873.7663 -7873.7663 -8015.3373 -8015.3373 273.87878 273.87878 124256.24 124256.24 -684.24042 -684.24042 Loop time of 61.0512 on 1 procs for 1000 steps with 4000 atoms Performance: 1.415 ns/day, 16.959 hours/ns, 16.380 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.864 | 60.864 | 60.864 | 0.0 | 99.69 Neigh | 0.033779 | 0.033779 | 0.033779 | 0.0 | 0.06 Comm | 0.022114 | 0.022114 | 0.022114 | 0.0 | 0.04 Output | 3.7411e-05 | 3.7411e-05 | 3.7411e-05 | 0.0 | 0.00 Modify | 0.121 | 0.121 | 0.121 | 0.0 | 0.20 Other | | 0.01004 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 285328 ave 285328 max 285328 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 285328 Ave neighs/atom = 71.332 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.132474380883, Press = -0.551100132302319 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -7873.7663 -7873.7663 -8015.3373 -8015.3373 273.87878 273.87878 124256.24 124256.24 -684.24042 -684.24042 23000 -7872.579 -7872.579 -8013.067 -8013.067 271.78353 271.78353 123946.47 123946.47 556.61569 556.61569 Loop time of 60.8257 on 1 procs for 1000 steps with 4000 atoms Performance: 1.420 ns/day, 16.896 hours/ns, 16.440 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.639 | 60.639 | 60.639 | 0.0 | 99.69 Neigh | 0.033646 | 0.033646 | 0.033646 | 0.0 | 0.06 Comm | 0.022278 | 0.022278 | 0.022278 | 0.0 | 0.04 Output | 3.7881e-05 | 3.7881e-05 | 3.7881e-05 | 0.0 | 0.00 Modify | 0.12094 | 0.12094 | 0.12094 | 0.0 | 0.20 Other | | 0.01002 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283182 ave 283182 max 283182 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283182 Ave neighs/atom = 70.7955 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T273.15.out" else "print 'not_converged' file output/vol_T273.15.out" print '${V}' file output/vol_T273.15.out 124101.540871488 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0