# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.94974747300148*${_u_distance} variable latticeconst_converted equal 4.94974747300148*1 lattice fcc ${latticeconst_converted} lattice fcc 4.94974747300148 Lattice spacing in x,y,z = 4.9497475 4.9497475 4.9497475 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (49.497475 49.497475 49.497475) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms using lattice units in orthogonal box = (0 0 0) to (49.497475 49.497475 49.497475) create_atoms CPU = 0.001 seconds variable mass_converted equal 207.2*${_u_mass} variable mass_converted equal 207.2*1 kim_interactions Pb WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Pb #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_KimLee_2017_MgPb__MO_325675357262_002 pair_coeff * * Pb #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 207.2 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 121268.813318623 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.813318623/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.813318623/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 121268.813318623/(1*1*${_u_distance}) variable V0_metal equal 121268.813318623/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 121268.813318623*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 121268.813318623 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_325675357262_002#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.613 | 4.613 | 4.613 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -8008.4674 -8008.4674 -8160 -8160 293.15 293.15 121268.81 121268.81 1334.6774 1334.6774 1000 -7834.2109 -7834.2109 -7995.9777 -7995.9777 312.94893 312.94893 124266.03 124266.03 486.15973 486.15973 Loop time of 60.0425 on 1 procs for 1000 steps with 4000 atoms Performance: 1.439 ns/day, 16.678 hours/ns, 16.655 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 59.856 | 59.856 | 59.856 | 0.0 | 99.69 Neigh | 0.033646 | 0.033646 | 0.033646 | 0.0 | 0.06 Comm | 0.022578 | 0.022578 | 0.022578 | 0.0 | 0.04 Output | 0.00015919 | 0.00015919 | 0.00015919 | 0.0 | 0.00 Modify | 0.11935 | 0.11935 | 0.11935 | 0.0 | 0.20 Other | | 0.01081 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5835 ave 5835 max 5835 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281048 ave 281048 max 281048 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281048 Ave neighs/atom = 70.262 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -7834.2109 -7834.2109 -7995.9777 -7995.9777 312.94893 312.94893 124266.03 124266.03 486.15973 486.15973 2000 -7847.4057 -7847.4057 -7999.0762 -7999.0762 293.41676 293.41676 124430.95 124430.95 -272.61391 -272.61391 Loop time of 60.1289 on 1 procs for 1000 steps with 4000 atoms Performance: 1.437 ns/day, 16.702 hours/ns, 16.631 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 59.945 | 59.945 | 59.945 | 0.0 | 99.69 Neigh | 0.033665 | 0.033665 | 0.033665 | 0.0 | 0.06 Comm | 0.022111 | 0.022111 | 0.022111 | 0.0 | 0.04 Output | 6.1526e-05 | 6.1526e-05 | 6.1526e-05 | 0.0 | 0.00 Modify | 0.11821 | 0.11821 | 0.11821 | 0.0 | 0.20 Other | | 0.01037 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282552 ave 282552 max 282552 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282552 Ave neighs/atom = 70.638 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -7847.4057 -7847.4057 -7999.0762 -7999.0762 293.41676 293.41676 124430.95 124430.95 -272.61391 -272.61391 3000 -7842.0605 -7842.0605 -7994.7237 -7994.7237 295.33734 295.33734 124462.13 124462.13 -43.842641 -43.842641 Loop time of 60.2356 on 1 procs for 1000 steps with 4000 atoms Performance: 1.434 ns/day, 16.732 hours/ns, 16.601 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.051 | 60.051 | 60.051 | 0.0 | 99.69 Neigh | 0.033707 | 0.033707 | 0.033707 | 0.0 | 0.06 Comm | 0.022223 | 0.022223 | 0.022223 | 0.0 | 0.04 Output | 5.9632e-05 | 5.9632e-05 | 5.9632e-05 | 0.0 | 0.00 Modify | 0.11832 | 0.11832 | 0.11832 | 0.0 | 0.20 Other | | 0.01037 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5836 ave 5836 max 5836 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281986 ave 281986 max 281986 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281986 Ave neighs/atom = 70.4965 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -7842.0605 -7842.0605 -7994.7237 -7994.7237 295.33734 295.33734 124462.13 124462.13 -43.842641 -43.842641 4000 -7849.587 -7849.587 -7998.0781 -7998.0781 287.26617 287.26617 124429.88 124429.88 -170.41178 -170.41178 Loop time of 60.3727 on 1 procs for 1000 steps with 4000 atoms Performance: 1.431 ns/day, 16.770 hours/ns, 16.564 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.188 | 60.188 | 60.188 | 0.0 | 99.69 Neigh | 0.033695 | 0.033695 | 0.033695 | 0.0 | 0.06 Comm | 0.022262 | 0.022262 | 0.022262 | 0.0 | 0.04 Output | 5.9822e-05 | 5.9822e-05 | 5.9822e-05 | 0.0 | 0.00 Modify | 0.11822 | 0.11822 | 0.11822 | 0.0 | 0.20 Other | | 0.01039 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282672 ave 282672 max 282672 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282672 Ave neighs/atom = 70.668 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -7849.587 -7849.587 -7998.0781 -7998.0781 287.26617 287.26617 124429.88 124429.88 -170.41178 -170.41178 5000 -7843.1528 -7843.1528 -7998.9826 -7998.9826 301.46333 301.46333 124416.19 124416.19 -111.11053 -111.11053 Loop time of 60.1194 on 1 procs for 1000 steps with 4000 atoms Performance: 1.437 ns/day, 16.700 hours/ns, 16.634 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 59.934 | 59.934 | 59.934 | 0.0 | 99.69 Neigh | 0.033757 | 0.033757 | 0.033757 | 0.0 | 0.06 Comm | 0.022234 | 0.022234 | 0.022234 | 0.0 | 0.04 Output | 4.1928e-05 | 4.1928e-05 | 4.1928e-05 | 0.0 | 0.00 Modify | 0.11866 | 0.11866 | 0.11866 | 0.0 | 0.20 Other | | 0.01042 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5840 ave 5840 max 5840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281832 ave 281832 max 281832 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281832 Ave neighs/atom = 70.458 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 300.699468964984, Press = 72.8617343701697 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -7843.1528 -7843.1528 -7998.9826 -7998.9826 301.46333 301.46333 124416.19 124416.19 -111.11053 -111.11053 6000 -7853.5522 -7853.5522 -8004.4609 -8004.4609 291.94319 291.94319 124334.85 124334.85 -225.83003 -225.83003 Loop time of 60.4608 on 1 procs for 1000 steps with 4000 atoms Performance: 1.429 ns/day, 16.795 hours/ns, 16.540 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.272 | 60.272 | 60.272 | 0.0 | 99.69 Neigh | 0.033758 | 0.033758 | 0.033758 | 0.0 | 0.06 Comm | 0.022293 | 0.022293 | 0.022293 | 0.0 | 0.04 Output | 5.4853e-05 | 5.4853e-05 | 5.4853e-05 | 0.0 | 0.00 Modify | 0.12257 | 0.12257 | 0.12257 | 0.0 | 0.20 Other | | 0.01041 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5840 ave 5840 max 5840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282680 ave 282680 max 282680 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282680 Ave neighs/atom = 70.67 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.872341138422, Press = -1.61603631550193 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -7853.5522 -7853.5522 -8004.4609 -8004.4609 291.94319 291.94319 124334.85 124334.85 -225.83003 -225.83003 7000 -7851.0608 -7851.0608 -8002.4238 -8002.4238 292.82211 292.82211 124270.83 124270.83 121.84823 121.84823 Loop time of 60.2613 on 1 procs for 1000 steps with 4000 atoms Performance: 1.434 ns/day, 16.739 hours/ns, 16.594 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.072 | 60.072 | 60.072 | 0.0 | 99.69 Neigh | 0.033748 | 0.033748 | 0.033748 | 0.0 | 0.06 Comm | 0.022151 | 0.022151 | 0.022151 | 0.0 | 0.04 Output | 4.6698e-05 | 4.6698e-05 | 4.6698e-05 | 0.0 | 0.00 Modify | 0.12249 | 0.12249 | 0.12249 | 0.0 | 0.20 Other | | 0.01042 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5836 ave 5836 max 5836 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282390 ave 282390 max 282390 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282390 Ave neighs/atom = 70.5975 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.339432730336, Press = -2.13528238084252 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -7851.0608 -7851.0608 -8002.4238 -8002.4238 292.82211 292.82211 124270.83 124270.83 121.84823 121.84823 8000 -7850.3042 -7850.3042 -8001.8516 -8001.8516 293.17889 293.17889 124331.95 124331.95 -52.199053 -52.199053 Loop time of 60.1917 on 1 procs for 1000 steps with 4000 atoms Performance: 1.435 ns/day, 16.720 hours/ns, 16.614 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.003 | 60.003 | 60.003 | 0.0 | 99.69 Neigh | 0.033709 | 0.033709 | 0.033709 | 0.0 | 0.06 Comm | 0.022224 | 0.022224 | 0.022224 | 0.0 | 0.04 Output | 4.9844e-05 | 4.9844e-05 | 4.9844e-05 | 0.0 | 0.00 Modify | 0.12253 | 0.12253 | 0.12253 | 0.0 | 0.20 Other | | 0.01039 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5834 ave 5834 max 5834 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282704 ave 282704 max 282704 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282704 Ave neighs/atom = 70.676 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.313105477408, Press = 4.70058764829627 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -7850.3042 -7850.3042 -8001.8516 -8001.8516 293.17889 293.17889 124331.95 124331.95 -52.199053 -52.199053 9000 -7853.3873 -7853.3873 -8003.1638 -8003.1638 289.75265 289.75265 124289.43 124289.43 18.621125 18.621125 Loop time of 60.4345 on 1 procs for 1000 steps with 4000 atoms Performance: 1.430 ns/day, 16.787 hours/ns, 16.547 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.246 | 60.246 | 60.246 | 0.0 | 99.69 Neigh | 0.033644 | 0.033644 | 0.033644 | 0.0 | 0.06 Comm | 0.022355 | 0.022355 | 0.022355 | 0.0 | 0.04 Output | 4.6527e-05 | 4.6527e-05 | 4.6527e-05 | 0.0 | 0.00 Modify | 0.12251 | 0.12251 | 0.12251 | 0.0 | 0.20 Other | | 0.01038 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5839 ave 5839 max 5839 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282518 ave 282518 max 282518 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282518 Ave neighs/atom = 70.6295 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.222555440975, Press = 2.67995510431534 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -7853.3873 -7853.3873 -8003.1638 -8003.1638 289.75265 289.75265 124289.43 124289.43 18.621125 18.621125 10000 -7848.5634 -7848.5634 -8000.5827 -8000.5827 294.09159 294.09159 124332.38 124332.38 12.231141 12.231141 Loop time of 60.2593 on 1 procs for 1000 steps with 4000 atoms Performance: 1.434 ns/day, 16.739 hours/ns, 16.595 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.071 | 60.071 | 60.071 | 0.0 | 99.69 Neigh | 0.033731 | 0.033731 | 0.033731 | 0.0 | 0.06 Comm | 0.022245 | 0.022245 | 0.022245 | 0.0 | 0.04 Output | 4.3262e-05 | 4.3262e-05 | 4.3262e-05 | 0.0 | 0.00 Modify | 0.12239 | 0.12239 | 0.12239 | 0.0 | 0.20 Other | | 0.01039 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5837 ave 5837 max 5837 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281328 ave 281328 max 281328 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281328 Ave neighs/atom = 70.332 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.055718561272, Press = 3.77695441616167 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -7848.5634 -7848.5634 -8000.5827 -8000.5827 294.09159 294.09159 124332.38 124332.38 12.231141 12.231141 11000 -7855.0483 -7855.0483 -8003.4837 -8003.4837 287.1583 287.1583 124516.89 124516.89 -876.94622 -876.94622 Loop time of 60.4464 on 1 procs for 1000 steps with 4000 atoms Performance: 1.429 ns/day, 16.791 hours/ns, 16.544 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.258 | 60.258 | 60.258 | 0.0 | 99.69 Neigh | 0.033639 | 0.033639 | 0.033639 | 0.0 | 0.06 Comm | 0.022355 | 0.022355 | 0.022355 | 0.0 | 0.04 Output | 4.4283e-05 | 4.4283e-05 | 4.4283e-05 | 0.0 | 0.00 Modify | 0.12242 | 0.12242 | 0.12242 | 0.0 | 0.20 Other | | 0.01039 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281852 ave 281852 max 281852 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281852 Ave neighs/atom = 70.463 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.033154497244, Press = 1.49145975511168 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -7855.0483 -7855.0483 -8003.4837 -8003.4837 287.1583 287.1583 124516.89 124516.89 -876.94622 -876.94622 12000 -7848.1463 -7848.1463 -7998.8444 -7998.8444 291.53558 291.53558 124364.33 124364.33 14.386155 14.386155 Loop time of 60.2668 on 1 procs for 1000 steps with 4000 atoms Performance: 1.434 ns/day, 16.741 hours/ns, 16.593 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.067 | 60.067 | 60.067 | 0.0 | 99.67 Neigh | 0.045026 | 0.045026 | 0.045026 | 0.0 | 0.07 Comm | 0.022366 | 0.022366 | 0.022366 | 0.0 | 0.04 Output | 5.1347e-05 | 5.1347e-05 | 5.1347e-05 | 0.0 | 0.00 Modify | 0.12245 | 0.12245 | 0.12245 | 0.0 | 0.20 Other | | 0.01041 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282130 ave 282130 max 282130 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282130 Ave neighs/atom = 70.5325 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.95679931087, Press = -1.07652167829067 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -7848.1463 -7848.1463 -7998.8444 -7998.8444 291.53558 291.53558 124364.33 124364.33 14.386155 14.386155 13000 -7851.4487 -7851.4487 -8001.7026 -8001.7026 290.67632 290.67632 124213.39 124213.39 402.55972 402.55972 Loop time of 60.2597 on 1 procs for 1000 steps with 4000 atoms Performance: 1.434 ns/day, 16.739 hours/ns, 16.595 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.071 | 60.071 | 60.071 | 0.0 | 99.69 Neigh | 0.033804 | 0.033804 | 0.033804 | 0.0 | 0.06 Comm | 0.022355 | 0.022355 | 0.022355 | 0.0 | 0.04 Output | 5.9942e-05 | 5.9942e-05 | 5.9942e-05 | 0.0 | 0.00 Modify | 0.12251 | 0.12251 | 0.12251 | 0.0 | 0.20 Other | | 0.01042 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5837 ave 5837 max 5837 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281732 ave 281732 max 281732 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281732 Ave neighs/atom = 70.433 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.034925540279, Press = 1.31523167051771 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -7851.4487 -7851.4487 -8001.7026 -8001.7026 290.67632 290.67632 124213.39 124213.39 402.55972 402.55972 14000 -7847.4174 -7847.4174 -8000.7389 -8000.7389 296.61086 296.61086 124470.79 124470.79 -456.19616 -456.19616 Loop time of 60.4544 on 1 procs for 1000 steps with 4000 atoms Performance: 1.429 ns/day, 16.793 hours/ns, 16.541 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.266 | 60.266 | 60.266 | 0.0 | 99.69 Neigh | 0.03368 | 0.03368 | 0.03368 | 0.0 | 0.06 Comm | 0.022326 | 0.022326 | 0.022326 | 0.0 | 0.04 Output | 8.1403e-05 | 8.1403e-05 | 8.1403e-05 | 0.0 | 0.00 Modify | 0.12239 | 0.12239 | 0.12239 | 0.0 | 0.20 Other | | 0.01042 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5836 ave 5836 max 5836 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282036 ave 282036 max 282036 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282036 Ave neighs/atom = 70.509 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.925019240569, Press = 0.849007634531403 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -7847.4174 -7847.4174 -8000.7389 -8000.7389 296.61086 296.61086 124470.79 124470.79 -456.19616 -456.19616 15000 -7849.9025 -7849.9025 -8001.3655 -8001.3655 293.01529 293.01529 124315.61 124315.61 20.267048 20.267048 Loop time of 60.465 on 1 procs for 1000 steps with 4000 atoms Performance: 1.429 ns/day, 16.796 hours/ns, 16.538 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.265 | 60.265 | 60.265 | 0.0 | 99.67 Neigh | 0.044987 | 0.044987 | 0.044987 | 0.0 | 0.07 Comm | 0.022395 | 0.022395 | 0.022395 | 0.0 | 0.04 Output | 4.6026e-05 | 4.6026e-05 | 4.6026e-05 | 0.0 | 0.00 Modify | 0.12245 | 0.12245 | 0.12245 | 0.0 | 0.20 Other | | 0.01035 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281790 ave 281790 max 281790 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281790 Ave neighs/atom = 70.4475 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.982750767312, Press = -1.1095185951702 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -7849.9025 -7849.9025 -8001.3655 -8001.3655 293.01529 293.01529 124315.61 124315.61 20.267048 20.267048 16000 -7844.9406 -7844.9406 -8000.4679 -8000.4679 300.87815 300.87815 124224.3 124224.3 458.37194 458.37194 Loop time of 60.3283 on 1 procs for 1000 steps with 4000 atoms Performance: 1.432 ns/day, 16.758 hours/ns, 16.576 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.128 | 60.128 | 60.128 | 0.0 | 99.67 Neigh | 0.044932 | 0.044932 | 0.044932 | 0.0 | 0.07 Comm | 0.022326 | 0.022326 | 0.022326 | 0.0 | 0.04 Output | 4.3752e-05 | 4.3752e-05 | 4.3752e-05 | 0.0 | 0.00 Modify | 0.1224 | 0.1224 | 0.1224 | 0.0 | 0.20 Other | | 0.01041 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5833 ave 5833 max 5833 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282592 ave 282592 max 282592 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282592 Ave neighs/atom = 70.648 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.035166039795, Press = 0.645586944048605 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -7844.9406 -7844.9406 -8000.4679 -8000.4679 300.87815 300.87815 124224.3 124224.3 458.37194 458.37194 17000 -7856.2211 -7856.2211 -8003.5073 -8003.5073 284.93508 284.93508 124247.73 124247.73 108.17382 108.17382 Loop time of 60.4915 on 1 procs for 1000 steps with 4000 atoms Performance: 1.428 ns/day, 16.803 hours/ns, 16.531 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.303 | 60.303 | 60.303 | 0.0 | 99.69 Neigh | 0.033785 | 0.033785 | 0.033785 | 0.0 | 0.06 Comm | 0.022182 | 0.022182 | 0.022182 | 0.0 | 0.04 Output | 4.269e-05 | 4.269e-05 | 4.269e-05 | 0.0 | 0.00 Modify | 0.1225 | 0.1225 | 0.1225 | 0.0 | 0.20 Other | | 0.01039 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283240 ave 283240 max 283240 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283240 Ave neighs/atom = 70.81 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.951406793893, Press = 1.59095391550486 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -7856.2211 -7856.2211 -8003.5073 -8003.5073 284.93508 284.93508 124247.73 124247.73 108.17382 108.17382 18000 -7850.5558 -7850.5558 -8000.6517 -8000.6517 290.37083 290.37083 124459.98 124459.98 -431.70401 -431.70401 Loop time of 60.185 on 1 procs for 1000 steps with 4000 atoms Performance: 1.436 ns/day, 16.718 hours/ns, 16.615 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 59.996 | 59.996 | 59.996 | 0.0 | 99.69 Neigh | 0.033772 | 0.033772 | 0.033772 | 0.0 | 0.06 Comm | 0.022208 | 0.022208 | 0.022208 | 0.0 | 0.04 Output | 4.6046e-05 | 4.6046e-05 | 4.6046e-05 | 0.0 | 0.00 Modify | 0.12233 | 0.12233 | 0.12233 | 0.0 | 0.20 Other | | 0.01038 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282014 ave 282014 max 282014 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282014 Ave neighs/atom = 70.5035 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.953199011922, Press = 1.31076242109163 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -7850.5558 -7850.5558 -8000.6517 -8000.6517 290.37083 290.37083 124459.98 124459.98 -431.70401 -431.70401 19000 -7853.2288 -7853.2288 -8003.8825 -8003.8825 291.44983 291.44983 124306.98 124306.98 -67.446388 -67.446388 Loop time of 60.3169 on 1 procs for 1000 steps with 4000 atoms Performance: 1.432 ns/day, 16.755 hours/ns, 16.579 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.128 | 60.128 | 60.128 | 0.0 | 99.69 Neigh | 0.033587 | 0.033587 | 0.033587 | 0.0 | 0.06 Comm | 0.022169 | 0.022169 | 0.022169 | 0.0 | 0.04 Output | 4.284e-05 | 4.284e-05 | 4.284e-05 | 0.0 | 0.00 Modify | 0.12224 | 0.12224 | 0.12224 | 0.0 | 0.20 Other | | 0.01039 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283030 ave 283030 max 283030 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283030 Ave neighs/atom = 70.7575 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.937235462235, Press = -0.395260967339555 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -7853.2288 -7853.2288 -8003.8825 -8003.8825 291.44983 291.44983 124306.98 124306.98 -67.446388 -67.446388 20000 -7844.7996 -7844.7996 -7999.4726 -7999.4726 299.2254 299.2254 124313 124313 220.9829 220.9829 Loop time of 60.5007 on 1 procs for 1000 steps with 4000 atoms Performance: 1.428 ns/day, 16.806 hours/ns, 16.529 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.312 | 60.312 | 60.312 | 0.0 | 99.69 Neigh | 0.033751 | 0.033751 | 0.033751 | 0.0 | 0.06 Comm | 0.02223 | 0.02223 | 0.02223 | 0.0 | 0.04 Output | 4.4594e-05 | 4.4594e-05 | 4.4594e-05 | 0.0 | 0.00 Modify | 0.12246 | 0.12246 | 0.12246 | 0.0 | 0.20 Other | | 0.01036 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5839 ave 5839 max 5839 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282136 ave 282136 max 282136 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282136 Ave neighs/atom = 70.534 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.97600491547, Press = 0.279337129111494 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -7844.7996 -7844.7996 -7999.4726 -7999.4726 299.2254 299.2254 124313 124313 220.9829 220.9829 21000 -7852.4202 -7852.4202 -8002.2663 -8002.2663 289.88741 289.88741 124277.57 124277.57 105.00779 105.00779 Loop time of 60.1581 on 1 procs for 1000 steps with 4000 atoms Performance: 1.436 ns/day, 16.711 hours/ns, 16.623 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 59.969 | 59.969 | 59.969 | 0.0 | 99.69 Neigh | 0.033593 | 0.033593 | 0.033593 | 0.0 | 0.06 Comm | 0.022286 | 0.022286 | 0.022286 | 0.0 | 0.04 Output | 4.4393e-05 | 4.4393e-05 | 4.4393e-05 | 0.0 | 0.00 Modify | 0.12236 | 0.12236 | 0.12236 | 0.0 | 0.20 Other | | 0.01037 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5840 ave 5840 max 5840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281846 ave 281846 max 281846 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281846 Ave neighs/atom = 70.4615 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.057640869365, Press = 1.06871090803112 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -7852.4202 -7852.4202 -8002.2663 -8002.2663 289.88741 289.88741 124277.57 124277.57 105.00779 105.00779 22000 -7853.4763 -7853.4763 -8001.3572 -8001.3572 286.08572 286.08572 124482.05 124482.05 -574.60677 -574.60677 Loop time of 60.3471 on 1 procs for 1000 steps with 4000 atoms Performance: 1.432 ns/day, 16.763 hours/ns, 16.571 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.158 | 60.158 | 60.158 | 0.0 | 99.69 Neigh | 0.03371 | 0.03371 | 0.03371 | 0.0 | 0.06 Comm | 0.022285 | 0.022285 | 0.022285 | 0.0 | 0.04 Output | 4.2219e-05 | 4.2219e-05 | 4.2219e-05 | 0.0 | 0.00 Modify | 0.12238 | 0.12238 | 0.12238 | 0.0 | 0.20 Other | | 0.01041 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282860 ave 282860 max 282860 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282860 Ave neighs/atom = 70.715 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.06601603064, Press = 0.252987122138519 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -7853.4763 -7853.4763 -8001.3572 -8001.3572 286.08572 286.08572 124482.05 124482.05 -574.60677 -574.60677 23000 -7845.5878 -7845.5878 -7996.1399 -7996.1399 291.25325 291.25325 124520.36 124520.36 -345.296 -345.296 Loop time of 60.4974 on 1 procs for 1000 steps with 4000 atoms Performance: 1.428 ns/day, 16.805 hours/ns, 16.530 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.309 | 60.309 | 60.309 | 0.0 | 99.69 Neigh | 0.0338 | 0.0338 | 0.0338 | 0.0 | 0.06 Comm | 0.022223 | 0.022223 | 0.022223 | 0.0 | 0.04 Output | 5.0735e-05 | 5.0735e-05 | 5.0735e-05 | 0.0 | 0.00 Modify | 0.1223 | 0.1223 | 0.1223 | 0.0 | 0.20 Other | | 0.0104 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5837 ave 5837 max 5837 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281986 ave 281986 max 281986 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281986 Ave neighs/atom = 70.4965 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.092598608089, Press = -1.17863688298688 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.232 | 4.232 | 4.232 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -7845.5878 -7845.5878 -7996.1399 -7996.1399 291.25325 291.25325 124520.36 124520.36 -345.296 -345.296 24000 -7848.4531 -7848.4531 -7999.92 -7999.92 293.023 293.023 124220.02 124220.02 495.24595 495.24595 Loop time of 60.355 on 1 procs for 1000 steps with 4000 atoms Performance: 1.432 ns/day, 16.765 hours/ns, 16.569 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.166 | 60.166 | 60.166 | 0.0 | 99.69 Neigh | 0.033683 | 0.033683 | 0.033683 | 0.0 | 0.06 Comm | 0.022362 | 0.022362 | 0.022362 | 0.0 | 0.04 Output | 4.5155e-05 | 4.5155e-05 | 4.5155e-05 | 0.0 | 0.00 Modify | 0.12222 | 0.12222 | 0.12222 | 0.0 | 0.20 Other | | 0.01038 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282334 ave 282334 max 282334 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282334 Ave neighs/atom = 70.5835 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 124314.960118864 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0