# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.949355715513235*${_u_distance} variable latticeconst_converted equal 4.949355715513235*1 lattice fcc ${latticeconst_converted} lattice fcc 4.94935571551324 Lattice spacing in x,y,z = 4.94936 4.94936 4.94936 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (49.4936 49.4936 49.4936) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000516891 secs variable mass_converted equal 207.2*${_u_mass} variable mass_converted equal 207.2*1 # specify which KIM Model to use pair_style kim EAM_Dynamo_ZhouWadleyJohnson_2001NISTretabulation_Pb__MO_988703794028_000 pair_coeff * * Pb mass 1 ${mass_converted} mass 1 207.2 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 121240.021422094 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 121240.021422094/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 121240.021422094/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 121240.021422094/(1*1*${_u_distance}) variable V0_metal equal 121240.021422094/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 121240.021422094*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 121240.021422094 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 273.15*${_u_temperature} variable temp_converted equal 273.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 273.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "273.15 - 0.2" variable T_up equal "273.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 9.82562 ghost atom cutoff = 9.82562 binsize = 4.91281, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 9.82562 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -7938.7981 -7938.7981 -8079.9924 -8079.9924 273.15 273.15 121240.02 121240.02 1244.1278 1244.1278 1000 -7766.4433 -7766.4433 -7918.0854 -7918.0854 293.36183 293.36183 124986.33 124986.33 414.297 414.297 Loop time of 20.6579 on 1 procs for 1000 steps with 4000 atoms Performance: 4.182 ns/day, 5.738 hours/ns, 48.408 timesteps/s 61.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 20.248 | 20.248 | 20.248 | 0.0 | 98.01 Neigh | 0.067778 | 0.067778 | 0.067778 | 0.0 | 0.33 Comm | 0.043864 | 0.043864 | 0.043864 | 0.0 | 0.21 Output | 4.4823e-05 | 4.4823e-05 | 4.4823e-05 | 0.0 | 0.00 Modify | 0.25854 | 0.25854 | 0.25854 | 0.0 | 1.25 Other | | 0.04011 | | | 0.19 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6242 ave 6242 max 6242 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536680 ave 536680 max 536680 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536680 Ave neighs/atom = 134.17 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -7766.4433 -7766.4433 -7918.0854 -7918.0854 293.36183 293.36183 124986.33 124986.33 414.297 414.297 2000 -7779.6231 -7779.6231 -7924.546 -7924.546 280.36331 280.36331 124883.99 124883.99 184.13537 184.13537 Loop time of 20.9285 on 1 procs for 1000 steps with 4000 atoms Performance: 4.128 ns/day, 5.813 hours/ns, 47.782 timesteps/s 60.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 20.42 | 20.42 | 20.42 | 0.0 | 97.57 Neigh | 0.10332 | 0.10332 | 0.10332 | 0.0 | 0.49 Comm | 0.10505 | 0.10505 | 0.10505 | 0.0 | 0.50 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.25955 | 0.25955 | 0.25955 | 0.0 | 1.24 Other | | 0.04017 | | | 0.19 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6222 ave 6222 max 6222 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537378 ave 537378 max 537378 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537378 Ave neighs/atom = 134.345 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -7779.6231 -7779.6231 -7924.546 -7924.546 280.36331 280.36331 124883.99 124883.99 184.13537 184.13537 3000 -7782.0419 -7782.0419 -7921.7398 -7921.7398 270.25498 270.25498 125042.09 125042.09 -130.14746 -130.14746 Loop time of 19.966 on 1 procs for 1000 steps with 4000 atoms Performance: 4.327 ns/day, 5.546 hours/ns, 50.085 timesteps/s 63.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 19.511 | 19.511 | 19.511 | 0.0 | 97.72 Neigh | 0.070293 | 0.070293 | 0.070293 | 0.0 | 0.35 Comm | 0.084682 | 0.084682 | 0.084682 | 0.0 | 0.42 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.28006 | 0.28006 | 0.28006 | 0.0 | 1.40 Other | | 0.02015 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6246 ave 6246 max 6246 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537154 ave 537154 max 537154 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537154 Ave neighs/atom = 134.288 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -7782.0419 -7782.0419 -7921.7398 -7921.7398 270.25498 270.25498 125042.09 125042.09 -130.14746 -130.14746 4000 -7786.732 -7786.732 -7926.4607 -7926.4607 270.31479 270.31479 124921.14 124921.14 -95.712117 -95.712117 Loop time of 21.8256 on 1 procs for 1000 steps with 4000 atoms Performance: 3.959 ns/day, 6.063 hours/ns, 45.818 timesteps/s 58.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 21.411 | 21.411 | 21.411 | 0.0 | 98.10 Neigh | 0.10901 | 0.10901 | 0.10901 | 0.0 | 0.50 Comm | 0.044959 | 0.044959 | 0.044959 | 0.0 | 0.21 Output | 4.3869e-05 | 4.3869e-05 | 4.3869e-05 | 0.0 | 0.00 Modify | 0.24023 | 0.24023 | 0.24023 | 0.0 | 1.10 Other | | 0.02026 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6242 ave 6242 max 6242 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537372 ave 537372 max 537372 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537372 Ave neighs/atom = 134.343 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -7786.732 -7786.732 -7926.4607 -7926.4607 270.31479 270.31479 124921.14 124921.14 -95.712117 -95.712117 5000 -7791.0405 -7791.0405 -7930.1827 -7930.1827 269.18009 269.18009 124832.33 124832.33 -65.633623 -65.633623 Loop time of 25.1208 on 1 procs for 1000 steps with 4000 atoms Performance: 3.439 ns/day, 6.978 hours/ns, 39.808 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.611 | 24.611 | 24.611 | 0.0 | 97.97 Neigh | 0.11043 | 0.11043 | 0.11043 | 0.0 | 0.44 Comm | 0.11136 | 0.11136 | 0.11136 | 0.0 | 0.44 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.26852 | 0.26852 | 0.26852 | 0.0 | 1.07 Other | | 0.01987 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6220 ave 6220 max 6220 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537870 ave 537870 max 537870 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537870 Ave neighs/atom = 134.468 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 269.325795510479, Press = -141.58416976977 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -7791.0405 -7791.0405 -7930.1827 -7930.1827 269.18009 269.18009 124832.33 124832.33 -65.633623 -65.633623 6000 -7780.1265 -7780.1265 -7924.3754 -7924.3754 279.05927 279.05927 124773.48 124773.48 583.54772 583.54772 Loop time of 25.1576 on 1 procs for 1000 steps with 4000 atoms Performance: 3.434 ns/day, 6.988 hours/ns, 39.749 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.66 | 24.66 | 24.66 | 0.0 | 98.02 Neigh | 0.11085 | 0.11085 | 0.11085 | 0.0 | 0.44 Comm | 0.063946 | 0.063946 | 0.063946 | 0.0 | 0.25 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.28272 | 0.28272 | 0.28272 | 0.0 | 1.12 Other | | 0.03986 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6309 ave 6309 max 6309 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537566 ave 537566 max 537566 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537566 Ave neighs/atom = 134.392 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.495580594147, Press = -26.0009797188536 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -7780.1265 -7780.1265 -7924.3754 -7924.3754 279.05927 279.05927 124773.48 124773.48 583.54772 583.54772 7000 -7785.0505 -7785.0505 -7926.7673 -7926.7673 274.16083 274.16083 124682.24 124682.24 654.71574 654.71574 Loop time of 25.1583 on 1 procs for 1000 steps with 4000 atoms Performance: 3.434 ns/day, 6.988 hours/ns, 39.748 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.621 | 24.621 | 24.621 | 0.0 | 97.86 Neigh | 0.089309 | 0.089309 | 0.089309 | 0.0 | 0.35 Comm | 0.084436 | 0.084436 | 0.084436 | 0.0 | 0.34 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.28384 | 0.28384 | 0.28384 | 0.0 | 1.13 Other | | 0.08014 | | | 0.32 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6295 ave 6295 max 6295 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537714 ave 537714 max 537714 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537714 Ave neighs/atom = 134.429 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.889137133249, Press = -2.50472074865959 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -7785.0505 -7785.0505 -7926.7673 -7926.7673 274.16083 274.16083 124682.24 124682.24 654.71574 654.71574 8000 -7788.416 -7788.416 -7928.3394 -7928.3394 270.69119 270.69119 124773.07 124773.07 219.36862 219.36862 Loop time of 25.4618 on 1 procs for 1000 steps with 4000 atoms Performance: 3.393 ns/day, 7.073 hours/ns, 39.275 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.862 | 24.862 | 24.862 | 0.0 | 97.65 Neigh | 0.11146 | 0.11146 | 0.11146 | 0.0 | 0.44 Comm | 0.1239 | 0.1239 | 0.1239 | 0.0 | 0.49 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.34379 | 0.34379 | 0.34379 | 0.0 | 1.35 Other | | 0.02025 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6208 ave 6208 max 6208 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537788 ave 537788 max 537788 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537788 Ave neighs/atom = 134.447 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.095575829727, Press = 2.44277510640558 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -7788.416 -7788.416 -7928.3394 -7928.3394 270.69119 270.69119 124773.07 124773.07 219.36862 219.36862 9000 -7783.1583 -7783.1583 -7926.5288 -7926.5288 277.36004 277.36004 124814.97 124814.97 277.01562 277.01562 Loop time of 25.0213 on 1 procs for 1000 steps with 4000 atoms Performance: 3.453 ns/day, 6.950 hours/ns, 39.966 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.586 | 24.586 | 24.586 | 0.0 | 98.26 Neigh | 0.071136 | 0.071136 | 0.071136 | 0.0 | 0.28 Comm | 0.04336 | 0.04336 | 0.04336 | 0.0 | 0.17 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.28155 | 0.28155 | 0.28155 | 0.0 | 1.13 Other | | 0.0396 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6246 ave 6246 max 6246 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537668 ave 537668 max 537668 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537668 Ave neighs/atom = 134.417 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.05453094185, Press = 1.27765438106829 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -7783.1583 -7783.1583 -7926.5288 -7926.5288 277.36004 277.36004 124814.97 124814.97 277.01562 277.01562 10000 -7786.8117 -7786.8117 -7927.7425 -7927.7425 272.64017 272.64017 124919.78 124919.78 -150.76891 -150.76891 Loop time of 25.1214 on 1 procs for 1000 steps with 4000 atoms Performance: 3.439 ns/day, 6.978 hours/ns, 39.807 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.484 | 24.484 | 24.484 | 0.0 | 97.46 Neigh | 0.13186 | 0.13186 | 0.13186 | 0.0 | 0.52 Comm | 0.083416 | 0.083416 | 0.083416 | 0.0 | 0.33 Output | 9.0122e-05 | 9.0122e-05 | 9.0122e-05 | 0.0 | 0.00 Modify | 0.34199 | 0.34199 | 0.34199 | 0.0 | 1.36 Other | | 0.08004 | | | 0.32 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6233 ave 6233 max 6233 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537586 ave 537586 max 537586 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537586 Ave neighs/atom = 134.397 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.847466766907, Press = 1.15818485548636 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -7786.8117 -7786.8117 -7927.7425 -7927.7425 272.64017 272.64017 124919.78 124919.78 -150.76891 -150.76891 11000 -7783.4314 -7783.4314 -7925.4497 -7925.4497 274.74409 274.74409 124947.77 124947.77 -117.98893 -117.98893 Loop time of 25.5422 on 1 procs for 1000 steps with 4000 atoms Performance: 3.383 ns/day, 7.095 hours/ns, 39.151 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.016 | 25.016 | 25.016 | 0.0 | 97.94 Neigh | 0.14191 | 0.14191 | 0.14191 | 0.0 | 0.56 Comm | 0.084137 | 0.084137 | 0.084137 | 0.0 | 0.33 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.26399 | 0.26399 | 0.26399 | 0.0 | 1.03 Other | | 0.03621 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6215 ave 6215 max 6215 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537500 ave 537500 max 537500 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537500 Ave neighs/atom = 134.375 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.993976429098, Press = 0.786139181161414 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -7783.4314 -7783.4314 -7925.4497 -7925.4497 274.74409 274.74409 124947.77 124947.77 -117.98893 -117.98893 12000 -7784.5052 -7784.5052 -7925.9413 -7925.9413 273.61775 273.61775 124928.24 124928.24 -105.12982 -105.12982 Loop time of 22.6421 on 1 procs for 1000 steps with 4000 atoms Performance: 3.816 ns/day, 6.289 hours/ns, 44.165 timesteps/s 55.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 22.144 | 22.144 | 22.144 | 0.0 | 97.80 Neigh | 0.1112 | 0.1112 | 0.1112 | 0.0 | 0.49 Comm | 0.08402 | 0.08402 | 0.08402 | 0.0 | 0.37 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.28328 | 0.28328 | 0.28328 | 0.0 | 1.25 Other | | 0.01995 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6286 ave 6286 max 6286 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537784 ave 537784 max 537784 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537784 Ave neighs/atom = 134.446 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.93941030866, Press = -0.407406575624013 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -7784.5052 -7784.5052 -7925.9413 -7925.9413 273.61775 273.61775 124928.24 124928.24 -105.12982 -105.12982 13000 -7783.4615 -7783.4615 -7925.1215 -7925.1215 274.05079 274.05079 125189.15 125189.15 -870.00691 -870.00691 Loop time of 25.2487 on 1 procs for 1000 steps with 4000 atoms Performance: 3.422 ns/day, 7.014 hours/ns, 39.606 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.671 | 24.671 | 24.671 | 0.0 | 97.71 Neigh | 0.071138 | 0.071138 | 0.071138 | 0.0 | 0.28 Comm | 0.083678 | 0.083678 | 0.083678 | 0.0 | 0.33 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.38245 | 0.38245 | 0.38245 | 0.0 | 1.51 Other | | 0.04007 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6208 ave 6208 max 6208 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537468 ave 537468 max 537468 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537468 Ave neighs/atom = 134.367 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.907284016979, Press = -1.39342662607655 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -7783.4615 -7783.4615 -7925.1215 -7925.1215 274.05079 274.05079 125189.15 125189.15 -870.00691 -870.00691 14000 -7787.2044 -7787.2044 -7928.2923 -7928.2923 272.94414 272.94414 124992.8 124992.8 -490.45755 -490.45755 Loop time of 23.7813 on 1 procs for 1000 steps with 4000 atoms Performance: 3.633 ns/day, 6.606 hours/ns, 42.050 timesteps/s 52.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 23.187 | 23.187 | 23.187 | 0.0 | 97.50 Neigh | 0.10847 | 0.10847 | 0.10847 | 0.0 | 0.46 Comm | 0.063343 | 0.063343 | 0.063343 | 0.0 | 0.27 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.36241 | 0.36241 | 0.36241 | 0.0 | 1.52 Other | | 0.06004 | | | 0.25 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6281 ave 6281 max 6281 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537384 ave 537384 max 537384 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537384 Ave neighs/atom = 134.346 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.929740387972, Press = -3.21113604197214 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -7787.2044 -7787.2044 -7928.2923 -7928.2923 272.94414 272.94414 124992.8 124992.8 -490.45755 -490.45755 15000 -7793.1642 -7793.1642 -7929.4208 -7929.4208 263.59756 263.59756 124846.82 124846.82 -78.022318 -78.022318 Loop time of 25.2054 on 1 procs for 1000 steps with 4000 atoms Performance: 3.428 ns/day, 7.001 hours/ns, 39.674 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.696 | 24.696 | 24.696 | 0.0 | 97.98 Neigh | 0.088644 | 0.088644 | 0.088644 | 0.0 | 0.35 Comm | 0.0642 | 0.0642 | 0.0642 | 0.0 | 0.25 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.24629 | 0.24629 | 0.24629 | 0.0 | 0.98 Other | | 0.11 | | | 0.44 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6165 ave 6165 max 6165 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537830 ave 537830 max 537830 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537830 Ave neighs/atom = 134.458 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.924333428765, Press = -2.15844841834981 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -7793.1642 -7793.1642 -7929.4208 -7929.4208 263.59756 263.59756 124846.82 124846.82 -78.022318 -78.022318 16000 -7780.9402 -7780.9402 -7926.179 -7926.179 280.97433 280.97433 124819.1 124819.1 278.13178 278.13178 Loop time of 25.1576 on 1 procs for 1000 steps with 4000 atoms Performance: 3.434 ns/day, 6.988 hours/ns, 39.749 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.589 | 24.589 | 24.589 | 0.0 | 97.74 Neigh | 0.10357 | 0.10357 | 0.10357 | 0.0 | 0.41 Comm | 0.083675 | 0.083675 | 0.083675 | 0.0 | 0.33 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.32089 | 0.32089 | 0.32089 | 0.0 | 1.28 Other | | 0.05998 | | | 0.24 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6184 ave 6184 max 6184 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537344 ave 537344 max 537344 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537344 Ave neighs/atom = 134.336 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.916745592999, Press = -0.853456376497399 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -7780.9402 -7780.9402 -7926.179 -7926.179 280.97433 280.97433 124819.1 124819.1 278.13178 278.13178 17000 -7783.2447 -7783.2447 -7925.514 -7925.514 275.2297 275.2297 124875.07 124875.07 103.42753 103.42753 Loop time of 27.1628 on 1 procs for 1000 steps with 4000 atoms Performance: 3.181 ns/day, 7.545 hours/ns, 36.815 timesteps/s 46.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.606 | 26.606 | 26.606 | 0.0 | 97.95 Neigh | 0.1324 | 0.1324 | 0.1324 | 0.0 | 0.49 Comm | 0.1135 | 0.1135 | 0.1135 | 0.0 | 0.42 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.23141 | 0.23141 | 0.23141 | 0.0 | 0.85 Other | | 0.07981 | | | 0.29 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6258 ave 6258 max 6258 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537552 ave 537552 max 537552 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537552 Ave neighs/atom = 134.388 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.936867316372, Press = -0.106696824863976 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -7783.2447 -7783.2447 -7925.514 -7925.514 275.2297 275.2297 124875.07 124875.07 103.42753 103.42753 18000 -7785.7576 -7785.7576 -7927.8655 -7927.8655 274.91743 274.91743 124990.36 124990.36 -383.91231 -383.91231 Loop time of 26.4961 on 1 procs for 1000 steps with 4000 atoms Performance: 3.261 ns/day, 7.360 hours/ns, 37.741 timesteps/s 47.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.823 | 25.823 | 25.823 | 0.0 | 97.46 Neigh | 0.088755 | 0.088755 | 0.088755 | 0.0 | 0.33 Comm | 0.13317 | 0.13317 | 0.13317 | 0.0 | 0.50 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.41126 | 0.41126 | 0.41126 | 0.0 | 1.55 Other | | 0.03983 | | | 0.15 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6185 ave 6185 max 6185 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537282 ave 537282 max 537282 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537282 Ave neighs/atom = 134.321 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.015789423075, Press = 0.231450856608305 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -7785.7576 -7785.7576 -7927.8655 -7927.8655 274.91743 274.91743 124990.36 124990.36 -383.91231 -383.91231 19000 -7792.1027 -7792.1027 -7930.9688 -7930.9688 268.64587 268.64587 124999.13 124999.13 -740.4144 -740.4144 Loop time of 26.741 on 1 procs for 1000 steps with 4000 atoms Performance: 3.231 ns/day, 7.428 hours/ns, 37.396 timesteps/s 46.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.161 | 26.161 | 26.161 | 0.0 | 97.83 Neigh | 0.09406 | 0.09406 | 0.09406 | 0.0 | 0.35 Comm | 0.10511 | 0.10511 | 0.10511 | 0.0 | 0.39 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.34143 | 0.34143 | 0.34143 | 0.0 | 1.28 Other | | 0.03951 | | | 0.15 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6168 ave 6168 max 6168 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537388 ave 537388 max 537388 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537388 Ave neighs/atom = 134.347 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.021455988921, Press = -1.3299343592777 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -7792.1027 -7792.1027 -7930.9688 -7930.9688 268.64587 268.64587 124999.13 124999.13 -740.4144 -740.4144 20000 -7788.0839 -7788.0839 -7929.6824 -7929.6824 273.93196 273.93196 124851.37 124851.37 -162.58465 -162.58465 Loop time of 25.0404 on 1 procs for 1000 steps with 4000 atoms Performance: 3.450 ns/day, 6.956 hours/ns, 39.935 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.517 | 24.517 | 24.517 | 0.0 | 97.91 Neigh | 0.094506 | 0.094506 | 0.094506 | 0.0 | 0.38 Comm | 0.062495 | 0.062495 | 0.062495 | 0.0 | 0.25 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.32589 | 0.32589 | 0.32589 | 0.0 | 1.30 Other | | 0.04061 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6199 ave 6199 max 6199 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537630 ave 537630 max 537630 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537630 Ave neighs/atom = 134.407 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.057858103204, Press = -2.30706520323317 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -7788.0839 -7788.0839 -7929.6824 -7929.6824 273.93196 273.93196 124851.37 124851.37 -162.58465 -162.58465 21000 -7783.9481 -7783.9481 -7926.2709 -7926.2709 275.33321 275.33321 124914.26 124914.26 -47.755975 -47.755975 Loop time of 25.387 on 1 procs for 1000 steps with 4000 atoms Performance: 3.403 ns/day, 7.052 hours/ns, 39.390 timesteps/s 49.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.786 | 24.786 | 24.786 | 0.0 | 97.63 Neigh | 0.10915 | 0.10915 | 0.10915 | 0.0 | 0.43 Comm | 0.1031 | 0.1031 | 0.1031 | 0.0 | 0.41 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.36883 | 0.36883 | 0.36883 | 0.0 | 1.45 Other | | 0.01959 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6188 ave 6188 max 6188 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537382 ave 537382 max 537382 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537382 Ave neighs/atom = 134.345 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.036092839328, Press = -0.560678180837592 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -7783.9481 -7783.9481 -7926.2709 -7926.2709 275.33321 275.33321 124914.26 124914.26 -47.755975 -47.755975 22000 -7792.1538 -7792.1538 -7928.9629 -7928.9629 264.66655 264.66655 124859.18 124859.18 -123.77044 -123.77044 Loop time of 25.0253 on 1 procs for 1000 steps with 4000 atoms Performance: 3.453 ns/day, 6.951 hours/ns, 39.960 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.521 | 24.521 | 24.521 | 0.0 | 97.98 Neigh | 0.10098 | 0.10098 | 0.10098 | 0.0 | 0.40 Comm | 0.073348 | 0.073348 | 0.073348 | 0.0 | 0.29 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.31077 | 0.31077 | 0.31077 | 0.0 | 1.24 Other | | 0.01963 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6229 ave 6229 max 6229 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537652 ave 537652 max 537652 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537652 Ave neighs/atom = 134.413 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.00469756308, Press = -0.555648962171137 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -7792.1538 -7792.1538 -7928.9629 -7928.9629 264.66655 264.66655 124859.18 124859.18 -123.77044 -123.77044 23000 -7787.7802 -7787.7802 -7926.5301 -7926.5301 268.42112 268.42112 124805.59 124805.59 225.68465 225.68465 Loop time of 24.8241 on 1 procs for 1000 steps with 4000 atoms Performance: 3.480 ns/day, 6.896 hours/ns, 40.284 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.197 | 24.197 | 24.197 | 0.0 | 97.48 Neigh | 0.068708 | 0.068708 | 0.068708 | 0.0 | 0.28 Comm | 0.096155 | 0.096155 | 0.096155 | 0.0 | 0.39 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.41852 | 0.41852 | 0.41852 | 0.0 | 1.69 Other | | 0.04325 | | | 0.17 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6147 ave 6147 max 6147 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537610 ave 537610 max 537610 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537610 Ave neighs/atom = 134.403 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.029190025063, Press = -0.834941364366734 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.374 | 5.374 | 5.374 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -7787.7802 -7787.7802 -7926.5301 -7926.5301 268.42112 268.42112 124805.59 124805.59 225.68465 225.68465 24000 -7786.3328 -7786.3328 -7924.7476 -7924.7476 267.7729 267.7729 124745.51 124745.51 573.4383 573.4383 Loop time of 25.1762 on 1 procs for 1000 steps with 4000 atoms Performance: 3.432 ns/day, 6.993 hours/ns, 39.720 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.541 | 24.541 | 24.541 | 0.0 | 97.48 Neigh | 0.12579 | 0.12579 | 0.12579 | 0.0 | 0.50 Comm | 0.13157 | 0.13157 | 0.13157 | 0.0 | 0.52 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.35825 | 0.35825 | 0.35825 | 0.0 | 1.42 Other | | 0.01982 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6260 ave 6260 max 6260 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 537828 ave 537828 max 537828 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 537828 Ave neighs/atom = 134.457 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T273.15.out" else "print 'not_converged' file output/vol_T273.15.out" print '${V}' file output/vol_T273.15.out 124860.187300579 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0