LAMMPS (8 Apr 2021) OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94) using 1 OpenMP thread(s) per MPI task Created triclinic box = (0.0000000 0.0000000 0.0000000) to (3.0861200 3.0678100 3.1122100) with tilt (-0.0061064700 0.0098117700 -0.033721500) 1 by 1 by 1 MPI processor grid Scanning dump file ... Reading snapshot from dump file ... triclinic box = (0.0000000 0.0000000 0.0000000) to (3.0861200 3.0678100 3.1122100) with tilt (-0.0061064700 0.0098117700 -0.033721500) 0 atoms before read 2 atoms in snapshot 0 atoms purged 0 atoms replaced 0 atoms trimmed 2 atoms added 2 atoms after read 2 atoms in group all Changing box ... triclinic box = (0.0000000 0.0000000 0.0000000) to (3.0861200 3.0678100 3.1122100) with tilt (-0.0061064700 0.0098117700 -0.033721500) triclinic box = (0.0000000 0.0000000 0.0000000) to (3.0861200 3.0678100 3.1122100) with tilt (-0.0061064700 0.0098117700 -0.033721500) triclinic box = (0.0000000 0.0000000 0.0000000) to (3.0861200 3.0678100 3.1122100) with tilt (-0.0061064700 0.0098117700 -0.033721500) triclinic box = (0.0000000 0.0000000 0.0000000) to (3.0861200 3.0678100 3.1122100) with tilt (-0.0061064700 0.0098117700 -0.033721500) triclinic box = (0.0000000 0.0000000 0.0000000) to (3.0861200 3.0678100 3.1122100) with tilt (-0.0061064700 0.0098117700 -0.033721500) triclinic box = (0.0000000 0.0000000 0.0000000) to (3.0861200 3.0678100 3.1122100) with tilt (-0.0061064700 0.0098117700 -0.033721500) CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 - OpenKIM potential: https://openkim.org/cite/MO_475612090600_005#item-citation The log file lists these citations in BibTeX format. CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 4000, page size: 100000 master list distance cutoff = 5.595518 ghost atom cutoff = 5.595518 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5.595518 pair build: full/nsq stencil: none bin: none Setting up Verlet run ... Unit style : metal Current step : 0 Time step : 0.001 Per MPI rank memory allocation (min/avg/max) = 5.077 | 5.077 | 5.077 Mbytes v_pe_metal -5.5788697 Loop time of 3.7e-06 on 1 procs for 0 steps with 2 atoms 135.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 0 | 0 | 0 | 0.0 | 0.00 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0 | 0 | 0 | 0.0 | 0.00 Output | 0 | 0 | 0 | 0.0 | 0.00 Modify | 0 | 0 | 0 | 0.0 | 0.00 Other | | 3.7e-06 | | |100.00 Nlocal: 2.00000 ave 2 max 2 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 187.000 ave 187 max 187 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 116.000 ave 116 max 116 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 116 Ave neighs/atom = 58.000000 Neighbor list builds = 0 Dangerous builds = 0 Total wall time: 0:00:00