# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.5162327885627747*${_u_distance} variable latticeconst_converted equal 3.5162327885627747*1 lattice fcc ${latticeconst_converted} lattice fcc 3.51623278856277 Lattice spacing in x,y,z = 3.51623 3.51623 3.51623 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (35.1623 35.1623 35.1623) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000462055 secs variable mass_converted equal 58.6934*${_u_mass} variable mass_converted equal 58.6934*1 # specify which KIM Model to use pair_style kim EAM_Dynamo_ZhangAshcraftMendelev_2016_NiNb__MO_047308317761_000 pair_coeff * * Ni mass 1 ${mass_converted} mass 1 58.6934 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 43474.3260430347 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 43474.3260430347/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 43474.3260430347/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 43474.3260430347/(1*1*${_u_distance}) variable V0_metal equal 43474.3260430347/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 43474.3260430347*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 43474.3260430347 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 273.15*${_u_temperature} variable temp_converted equal 273.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 273.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "273.15 - 0.2" variable T_up equal "273.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8.9 ghost atom cutoff = 8.9 binsize = 4.45, bins = 8 8 8 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8.9 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.527 | 7.527 | 7.527 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -19364.054 -19364.054 -19505.248 -19505.248 273.15 273.15 43474.326 43474.326 3468.9569 3468.9569 1000 -19215.012 -19215.012 -19355.855 -19355.855 272.46952 272.46952 43825.099 43825.099 -33.58298 -33.58298 Loop time of 60.7063 on 1 procs for 1000 steps with 4000 atoms Performance: 1.423 ns/day, 16.863 hours/ns, 16.473 timesteps/s 39.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.078 | 60.078 | 60.078 | 0.0 | 98.96 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17807 | 0.17807 | 0.17807 | 0.0 | 0.29 Output | 5.8174e-05 | 5.8174e-05 | 5.8174e-05 | 0.0 | 0.00 Modify | 0.37756 | 0.37756 | 0.37756 | 0.0 | 0.62 Other | | 0.07308 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 992000 ave 992000 max 992000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 992000 Ave neighs/atom = 248 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -19215.012 -19215.012 -19355.855 -19355.855 272.46952 272.46952 43825.099 43825.099 -33.58298 -33.58298 2000 -19223.293 -19223.293 -19368.285 -19368.285 280.49774 280.49774 43843.978 43843.978 -1609.3571 -1609.3571 Loop time of 64.0718 on 1 procs for 1000 steps with 4000 atoms Performance: 1.348 ns/day, 17.798 hours/ns, 15.607 timesteps/s 39.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.333 | 63.333 | 63.333 | 0.0 | 98.85 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17651 | 0.17651 | 0.17651 | 0.0 | 0.28 Output | 4.3869e-05 | 4.3869e-05 | 4.3869e-05 | 0.0 | 0.00 Modify | 0.51951 | 0.51951 | 0.51951 | 0.0 | 0.81 Other | | 0.04293 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10658 ave 10658 max 10658 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03665e+06 ave 1.03665e+06 max 1.03665e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1036648 Ave neighs/atom = 259.162 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -19223.293 -19223.293 -19368.285 -19368.285 280.49774 280.49774 43843.978 43843.978 -1609.3571 -1609.3571 3000 -19221.464 -19221.464 -19364.012 -19364.012 275.76857 275.76857 43807.674 43807.674 86.04456 86.04456 Loop time of 62.7842 on 1 procs for 1000 steps with 4000 atoms Performance: 1.376 ns/day, 17.440 hours/ns, 15.928 timesteps/s 40.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 62.224 | 62.224 | 62.224 | 0.0 | 99.11 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20669 | 0.20669 | 0.20669 | 0.0 | 0.33 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.33083 | 0.33083 | 0.33083 | 0.0 | 0.53 Other | | 0.02296 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10630 ave 10630 max 10630 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03312e+06 ave 1.03312e+06 max 1.03312e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1033124 Ave neighs/atom = 258.281 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -19221.464 -19221.464 -19364.012 -19364.012 275.76857 275.76857 43807.674 43807.674 86.04456 86.04456 4000 -19220.227 -19220.227 -19357.108 -19357.108 264.80548 264.80548 43789.588 43789.588 1175.2717 1175.2717 Loop time of 60.5562 on 1 procs for 1000 steps with 4000 atoms Performance: 1.427 ns/day, 16.821 hours/ns, 16.514 timesteps/s 41.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.015 | 60.015 | 60.015 | 0.0 | 99.11 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14703 | 0.14703 | 0.14703 | 0.0 | 0.24 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.34066 | 0.34066 | 0.34066 | 0.0 | 0.56 Other | | 0.05312 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10735 ave 10735 max 10735 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03501e+06 ave 1.03501e+06 max 1.03501e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1035006 Ave neighs/atom = 258.752 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -19220.227 -19220.227 -19357.108 -19357.108 264.80548 264.80548 43789.588 43789.588 1175.2717 1175.2717 5000 -19224.702 -19224.702 -19362.348 -19362.348 266.28547 266.28547 43795.369 43795.369 629.6949 629.6949 Loop time of 62.6208 on 1 procs for 1000 steps with 4000 atoms Performance: 1.380 ns/day, 17.395 hours/ns, 15.969 timesteps/s 40.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 61.99 | 61.99 | 61.99 | 0.0 | 98.99 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.096645 | 0.096645 | 0.096645 | 0.0 | 0.15 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.47128 | 0.47128 | 0.47128 | 0.0 | 0.75 Other | | 0.06293 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10638 ave 10638 max 10638 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03964e+06 ave 1.03964e+06 max 1.03964e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1039640 Ave neighs/atom = 259.91 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 271.371773036635, Press = 381.273097040662 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -19224.702 -19224.702 -19362.348 -19362.348 266.28547 266.28547 43795.369 43795.369 629.6949 629.6949 6000 -19219.525 -19219.525 -19360.587 -19360.587 272.89352 272.89352 43855.609 43855.609 -1675.5403 -1675.5403 Loop time of 61.9494 on 1 procs for 1000 steps with 4000 atoms Performance: 1.395 ns/day, 17.208 hours/ns, 16.142 timesteps/s 40.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 61.344 | 61.344 | 61.344 | 0.0 | 99.02 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14665 | 0.14665 | 0.14665 | 0.0 | 0.24 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.39587 | 0.39587 | 0.39587 | 0.0 | 0.64 Other | | 0.06304 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10703 ave 10703 max 10703 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03665e+06 ave 1.03665e+06 max 1.03665e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1036646 Ave neighs/atom = 259.161 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.701785579229, Press = 19.8262351957761 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -19219.525 -19219.525 -19360.587 -19360.587 272.89352 272.89352 43855.609 43855.609 -1675.5403 -1675.5403 7000 -19224.918 -19224.918 -19364.38 -19364.38 269.79883 269.79883 43837.149 43837.149 -1198.7007 -1198.7007 Loop time of 62.2812 on 1 procs for 1000 steps with 4000 atoms Performance: 1.387 ns/day, 17.300 hours/ns, 16.056 timesteps/s 40.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 61.331 | 61.331 | 61.331 | 0.0 | 98.47 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.28678 | 0.28678 | 0.28678 | 0.0 | 0.46 Output | 2.718e-05 | 2.718e-05 | 2.718e-05 | 0.0 | 0.00 Modify | 0.53996 | 0.53996 | 0.53996 | 0.0 | 0.87 Other | | 0.1233 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10641 ave 10641 max 10641 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03397e+06 ave 1.03397e+06 max 1.03397e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1033968 Ave neighs/atom = 258.492 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.998285101001, Press = -27.9518313970256 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -19224.918 -19224.918 -19364.38 -19364.38 269.79883 269.79883 43837.149 43837.149 -1198.7007 -1198.7007 8000 -19221.156 -19221.156 -19359.776 -19359.776 268.16896 268.16896 43768.668 43768.668 1881.8806 1881.8806 Loop time of 64.9221 on 1 procs for 1000 steps with 4000 atoms Performance: 1.331 ns/day, 18.034 hours/ns, 15.403 timesteps/s 38.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 64.36 | 64.36 | 64.36 | 0.0 | 99.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.18666 | 0.18666 | 0.18666 | 0.0 | 0.29 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.33284 | 0.33284 | 0.33284 | 0.0 | 0.51 Other | | 0.04289 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10647 ave 10647 max 10647 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03436e+06 ave 1.03436e+06 max 1.03436e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1034358 Ave neighs/atom = 258.589 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.85122399443, Press = -3.85452122516764 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -19221.156 -19221.156 -19359.776 -19359.776 268.16896 268.16896 43768.668 43768.668 1881.8806 1881.8806 9000 -19223.343 -19223.343 -19363.129 -19363.129 270.42426 270.42426 43791.299 43791.299 805.15486 805.15486 Loop time of 70.1516 on 1 procs for 1000 steps with 4000 atoms Performance: 1.232 ns/day, 19.487 hours/ns, 14.255 timesteps/s 35.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.427 | 69.427 | 69.427 | 0.0 | 98.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17708 | 0.17708 | 0.17708 | 0.0 | 0.25 Output | 4.9114e-05 | 4.9114e-05 | 4.9114e-05 | 0.0 | 0.00 Modify | 0.46484 | 0.46484 | 0.46484 | 0.0 | 0.66 Other | | 0.08309 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10663 ave 10663 max 10663 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03897e+06 ave 1.03897e+06 max 1.03897e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1038966 Ave neighs/atom = 259.741 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.528960093152, Press = 8.61329351789125 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -19223.343 -19223.343 -19363.129 -19363.129 270.42426 270.42426 43791.299 43791.299 805.15486 805.15486 10000 -19221.133 -19221.133 -19363.363 -19363.363 275.1535 275.1535 43824.366 43824.366 -464.67312 -464.67312 Loop time of 70.1771 on 1 procs for 1000 steps with 4000 atoms Performance: 1.231 ns/day, 19.494 hours/ns, 14.250 timesteps/s 35.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.463 | 69.463 | 69.463 | 0.0 | 98.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22806 | 0.22806 | 0.22806 | 0.0 | 0.32 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.38556 | 0.38556 | 0.38556 | 0.0 | 0.55 Other | | 0.1006 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10583 ave 10583 max 10583 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03751e+06 ave 1.03751e+06 max 1.03751e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1037514 Ave neighs/atom = 259.378 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.473108999212, Press = 5.79242987725551 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -19221.133 -19221.133 -19363.363 -19363.363 275.1535 275.1535 43824.366 43824.366 -464.67312 -464.67312 11000 -19221.258 -19221.258 -19362.506 -19362.506 273.25265 273.25265 43847.001 43847.001 -1404.6297 -1404.6297 Loop time of 69.1421 on 1 procs for 1000 steps with 4000 atoms Performance: 1.250 ns/day, 19.206 hours/ns, 14.463 timesteps/s 36.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.325 | 68.325 | 68.325 | 0.0 | 98.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22643 | 0.22643 | 0.22643 | 0.0 | 0.33 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.52734 | 0.52734 | 0.52734 | 0.0 | 0.76 Other | | 0.06286 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10671 ave 10671 max 10671 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03444e+06 ave 1.03444e+06 max 1.03444e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1034438 Ave neighs/atom = 258.61 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.464844602604, Press = 1.6782633914778 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -19221.258 -19221.258 -19362.506 -19362.506 273.25265 273.25265 43847.001 43847.001 -1404.6297 -1404.6297 12000 -19226.097 -19226.097 -19364.512 -19364.512 267.77202 267.77202 43829.543 43829.543 -999.97709 -999.97709 Loop time of 70.0417 on 1 procs for 1000 steps with 4000 atoms Performance: 1.234 ns/day, 19.456 hours/ns, 14.277 timesteps/s 35.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.24 | 69.24 | 69.24 | 0.0 | 98.86 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22599 | 0.22599 | 0.22599 | 0.0 | 0.32 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.47306 | 0.47306 | 0.47306 | 0.0 | 0.68 Other | | 0.1028 | | | 0.15 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10511 ave 10511 max 10511 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03411e+06 ave 1.03411e+06 max 1.03411e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1034108 Ave neighs/atom = 258.527 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.430613916655, Press = -5.15657601317355 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -19226.097 -19226.097 -19364.512 -19364.512 267.77202 267.77202 43829.543 43829.543 -999.97709 -999.97709 13000 -19221.209 -19221.209 -19362.486 -19362.486 273.31003 273.31003 43759.585 43759.585 2178.73 2178.73 Loop time of 71.5326 on 1 procs for 1000 steps with 4000 atoms Performance: 1.208 ns/day, 19.870 hours/ns, 13.980 timesteps/s 34.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 70.7 | 70.7 | 70.7 | 0.0 | 98.84 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22673 | 0.22673 | 0.22673 | 0.0 | 0.32 Output | 2.6226e-05 | 2.6226e-05 | 2.6226e-05 | 0.0 | 0.00 Modify | 0.54185 | 0.54185 | 0.54185 | 0.0 | 0.76 Other | | 0.06423 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10634 ave 10634 max 10634 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03432e+06 ave 1.03432e+06 max 1.03432e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1034318 Ave neighs/atom = 258.579 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.387403715059, Press = -2.76661403136386 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -19221.209 -19221.209 -19362.486 -19362.486 273.31003 273.31003 43759.585 43759.585 2178.73 2178.73 14000 -19220.491 -19220.491 -19364.432 -19364.432 278.46362 278.46362 43779.124 43779.124 1278.7558 1278.7558 Loop time of 70.0342 on 1 procs for 1000 steps with 4000 atoms Performance: 1.234 ns/day, 19.454 hours/ns, 14.279 timesteps/s 35.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.27 | 69.27 | 69.27 | 0.0 | 98.91 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.28674 | 0.28674 | 0.28674 | 0.0 | 0.41 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.45435 | 0.45435 | 0.45435 | 0.0 | 0.65 Other | | 0.02285 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10680 ave 10680 max 10680 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03765e+06 ave 1.03765e+06 max 1.03765e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1037646 Ave neighs/atom = 259.411 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.293274803864, Press = 6.03336354368528 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -19220.491 -19220.491 -19364.432 -19364.432 278.46362 278.46362 43779.124 43779.124 1278.7558 1278.7558 15000 -19222.602 -19222.602 -19361.81 -19361.81 269.30736 269.30736 43818.927 43818.927 -176.62094 -176.62094 Loop time of 71.7774 on 1 procs for 1000 steps with 4000 atoms Performance: 1.204 ns/day, 19.938 hours/ns, 13.932 timesteps/s 35.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 70.924 | 70.924 | 70.924 | 0.0 | 98.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14626 | 0.14626 | 0.14626 | 0.0 | 0.20 Output | 4.7922e-05 | 4.7922e-05 | 4.7922e-05 | 0.0 | 0.00 Modify | 0.62432 | 0.62432 | 0.62432 | 0.0 | 0.87 Other | | 0.08294 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10677 ave 10677 max 10677 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.0364e+06 ave 1.0364e+06 max 1.0364e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1036404 Ave neighs/atom = 259.101 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.500552044774, Press = 3.8114168369788 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -19222.602 -19222.602 -19361.81 -19361.81 269.30736 269.30736 43818.927 43818.927 -176.62094 -176.62094 16000 -19218.705 -19218.705 -19362.939 -19362.939 279.03021 279.03021 43833.568 43833.568 -668.53642 -668.53642 Loop time of 79.1189 on 1 procs for 1000 steps with 4000 atoms Performance: 1.092 ns/day, 21.977 hours/ns, 12.639 timesteps/s 31.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 78.224 | 78.224 | 78.224 | 0.0 | 98.87 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17673 | 0.17673 | 0.17673 | 0.0 | 0.22 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.61514 | 0.61514 | 0.61514 | 0.0 | 0.78 Other | | 0.103 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10680 ave 10680 max 10680 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03542e+06 ave 1.03542e+06 max 1.03542e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1035416 Ave neighs/atom = 258.854 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.688429636635, Press = 1.27064159350992 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -19218.705 -19218.705 -19362.939 -19362.939 279.03021 279.03021 43833.568 43833.568 -668.53642 -668.53642 17000 -19223.343 -19223.343 -19365.092 -19365.092 274.22158 274.22158 43799.642 43799.642 359.77648 359.77648 Loop time of 78.7019 on 1 procs for 1000 steps with 4000 atoms Performance: 1.098 ns/day, 21.862 hours/ns, 12.706 timesteps/s 32.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 77.897 | 77.897 | 77.897 | 0.0 | 98.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14583 | 0.14583 | 0.14583 | 0.0 | 0.19 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.61589 | 0.61589 | 0.61589 | 0.0 | 0.78 Other | | 0.0431 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10579 ave 10579 max 10579 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03427e+06 ave 1.03427e+06 max 1.03427e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1034270 Ave neighs/atom = 258.567 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.719349996075, Press = -0.262778619173337 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -19223.343 -19223.343 -19365.092 -19365.092 274.22158 274.22158 43799.642 43799.642 359.77648 359.77648 18000 -19221.485 -19221.485 -19364.892 -19364.892 277.43065 277.43065 43759.992 43759.992 1940.4962 1940.4962 Loop time of 78.0419 on 1 procs for 1000 steps with 4000 atoms Performance: 1.107 ns/day, 21.678 hours/ns, 12.814 timesteps/s 32.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 77.324 | 77.324 | 77.324 | 0.0 | 99.08 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.30694 | 0.30694 | 0.30694 | 0.0 | 0.39 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.31046 | 0.31046 | 0.31046 | 0.0 | 0.40 Other | | 0.1009 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10714 ave 10714 max 10714 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03587e+06 ave 1.03587e+06 max 1.03587e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1035870 Ave neighs/atom = 258.967 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.782286373513, Press = 2.52149423550062 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -19221.485 -19221.485 -19364.892 -19364.892 277.43065 277.43065 43759.992 43759.992 1940.4962 1940.4962 19000 -19218.551 -19218.551 -19360.395 -19360.395 274.40674 274.40674 43815.445 43815.445 -20.477928 -20.477928 Loop time of 76.3857 on 1 procs for 1000 steps with 4000 atoms Performance: 1.131 ns/day, 21.218 hours/ns, 13.091 timesteps/s 33.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 75.645 | 75.645 | 75.645 | 0.0 | 99.03 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16603 | 0.16603 | 0.16603 | 0.0 | 0.22 Output | 5.3883e-05 | 5.3883e-05 | 5.3883e-05 | 0.0 | 0.00 Modify | 0.51166 | 0.51166 | 0.51166 | 0.0 | 0.67 Other | | 0.06295 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10633 ave 10633 max 10633 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03908e+06 ave 1.03908e+06 max 1.03908e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1039080 Ave neighs/atom = 259.77 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.78068803801, Press = 5.06200717917462 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -19218.551 -19218.551 -19360.395 -19360.395 274.40674 274.40674 43815.445 43815.445 -20.477928 -20.477928 20000 -19223.313 -19223.313 -19364.59 -19364.59 273.31131 273.31131 43857.939 43857.939 -2015.0865 -2015.0865 Loop time of 75.8085 on 1 procs for 1000 steps with 4000 atoms Performance: 1.140 ns/day, 21.058 hours/ns, 13.191 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 74.85 | 74.85 | 74.85 | 0.0 | 98.74 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.30694 | 0.30694 | 0.30694 | 0.0 | 0.40 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.58793 | 0.58793 | 0.58793 | 0.0 | 0.78 Other | | 0.06311 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10675 ave 10675 max 10675 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03706e+06 ave 1.03706e+06 max 1.03706e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1037062 Ave neighs/atom = 259.265 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.860747215014, Press = 1.06500639712029 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -19223.313 -19223.313 -19364.59 -19364.59 273.31131 273.31131 43857.939 43857.939 -2015.0865 -2015.0865 21000 -19217.648 -19217.648 -19362.371 -19362.371 279.97542 279.97542 43828.483 43828.483 -536.18448 -536.18448 Loop time of 75.0689 on 1 procs for 1000 steps with 4000 atoms Performance: 1.151 ns/day, 20.852 hours/ns, 13.321 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 74.412 | 74.412 | 74.412 | 0.0 | 99.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16682 | 0.16682 | 0.16682 | 0.0 | 0.22 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.40665 | 0.40665 | 0.40665 | 0.0 | 0.54 Other | | 0.08322 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10647 ave 10647 max 10647 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03291e+06 ave 1.03291e+06 max 1.03291e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1032912 Ave neighs/atom = 258.228 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.974222228988, Press = -0.992145420244445 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.529 | 7.529 | 7.529 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -19217.648 -19217.648 -19362.371 -19362.371 279.97542 279.97542 43828.483 43828.483 -536.18448 -536.18448 22000 -19222.509 -19222.509 -19364.089 -19364.089 273.89665 273.89665 43799.847 43799.847 451.33803 451.33803 Loop time of 75.8452 on 1 procs for 1000 steps with 4000 atoms Performance: 1.139 ns/day, 21.068 hours/ns, 13.185 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 75.011 | 75.011 | 75.011 | 0.0 | 98.90 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20597 | 0.20597 | 0.20597 | 0.0 | 0.27 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.58532 | 0.58532 | 0.58532 | 0.0 | 0.77 Other | | 0.04286 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10605 ave 10605 max 10605 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.03563e+06 ave 1.03563e+06 max 1.03563e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1035628 Ave neighs/atom = 258.907 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T273.15.out" else "print 'not_converged' file output/vol_T273.15.out" print '${V}' file output/vol_T273.15.out 43812.2650266889 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0