# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.491938583552837*${_u_distance} variable latticeconst_converted equal 3.491938583552837*1 lattice fcc ${latticeconst_converted} lattice fcc 3.49193858355284 Lattice spacing in x,y,z = 3.49194 3.49194 3.49194 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (34.9194 34.9194 34.9194) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000452042 secs variable mass_converted equal 58.6934*${_u_mass} variable mass_converted equal 58.6934*1 # specify which KIM Model to use pair_style kim EMT_Asap_Standard_JacobsenStoltzeNorskov_1996_Ni__MO_108408461881_001 pair_coeff * * Ni mass 1 ${mass_converted} mass 1 58.6934 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 42579.4247792531 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 42579.4247792531/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 42579.4247792531/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 42579.4247792531/(1*1*${_u_distance}) variable V0_metal equal 42579.4247792531/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 42579.4247792531*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 42579.4247792531 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.85342 ghost atom cutoff = 6.85342 binsize = 3.42671, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.85342 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -17611.665 -17611.665 -17773.536 -17773.536 313.15 313.15 42579.425 42579.425 4060.5111 4060.5111 1000 -17436.046 -17436.046 -17601.341 -17601.341 319.77351 319.77351 43190.367 43190.367 -213.20387 -213.20387 Loop time of 71.369 on 1 procs for 1000 steps with 4000 atoms Performance: 1.211 ns/day, 19.825 hours/ns, 14.012 timesteps/s 36.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 70.734 | 70.734 | 70.734 | 0.0 | 99.11 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1197 | 0.1197 | 0.1197 | 0.0 | 0.17 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.43508 | 0.43508 | 0.43508 | 0.0 | 0.61 Other | | 0.07982 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536000 ave 536000 max 536000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536000 Ave neighs/atom = 134 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -17436.046 -17436.046 -17601.341 -17601.341 319.77351 319.77351 43190.367 43190.367 -213.20387 -213.20387 2000 -17450.352 -17450.352 -17608.433 -17608.433 305.81799 305.81799 43178.711 43178.711 -764.25393 -764.25393 Loop time of 76.074 on 1 procs for 1000 steps with 4000 atoms Performance: 1.136 ns/day, 21.132 hours/ns, 13.145 timesteps/s 36.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 75.53 | 75.53 | 75.53 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059156 | 0.059156 | 0.059156 | 0.0 | 0.08 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.40458 | 0.40458 | 0.40458 | 0.0 | 0.53 Other | | 0.07975 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5853 ave 5853 max 5853 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536768 ave 536768 max 536768 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536768 Ave neighs/atom = 134.192 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -17450.352 -17450.352 -17608.433 -17608.433 305.81799 305.81799 43178.711 43178.711 -764.25393 -764.25393 3000 -17445.892 -17445.892 -17610.921 -17610.921 319.25845 319.25845 43149.491 43149.491 383.13512 383.13512 Loop time of 74.0455 on 1 procs for 1000 steps with 4000 atoms Performance: 1.167 ns/day, 20.568 hours/ns, 13.505 timesteps/s 37.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 73.451 | 73.451 | 73.451 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.09922 | 0.09922 | 0.09922 | 0.0 | 0.13 Output | 3.9101e-05 | 3.9101e-05 | 3.9101e-05 | 0.0 | 0.00 Modify | 0.43589 | 0.43589 | 0.43589 | 0.0 | 0.59 Other | | 0.05977 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5845 ave 5845 max 5845 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536676 ave 536676 max 536676 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536676 Ave neighs/atom = 134.169 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -17445.892 -17445.892 -17610.921 -17610.921 319.25845 319.25845 43149.491 43149.491 383.13512 383.13512 4000 -17443.97 -17443.97 -17605.922 -17605.922 313.30663 313.30663 43159.862 43159.862 391.23441 391.23441 Loop time of 72.7448 on 1 procs for 1000 steps with 4000 atoms Performance: 1.188 ns/day, 20.207 hours/ns, 13.747 timesteps/s 38.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 72.155 | 72.155 | 72.155 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.08006 | 0.08006 | 0.08006 | 0.0 | 0.11 Output | 4.0054e-05 | 4.0054e-05 | 4.0054e-05 | 0.0 | 0.00 Modify | 0.38969 | 0.38969 | 0.38969 | 0.0 | 0.54 Other | | 0.1197 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5849 ave 5849 max 5849 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536622 ave 536622 max 536622 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536622 Ave neighs/atom = 134.155 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -17443.97 -17443.97 -17605.922 -17605.922 313.30663 313.30663 43159.862 43159.862 391.23441 391.23441 5000 -17447.348 -17447.348 -17604.765 -17604.765 304.53499 304.53499 43189.951 43189.951 -795.52536 -795.52536 Loop time of 73.736 on 1 procs for 1000 steps with 4000 atoms Performance: 1.172 ns/day, 20.482 hours/ns, 13.562 timesteps/s 37.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 73.131 | 73.131 | 73.131 | 0.0 | 99.18 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.09927 | 0.09927 | 0.09927 | 0.0 | 0.13 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.44622 | 0.44622 | 0.44622 | 0.0 | 0.61 Other | | 0.05942 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5844 ave 5844 max 5844 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536720 ave 536720 max 536720 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536720 Ave neighs/atom = 134.18 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.420593337369, Press = -155.41438185396 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -17447.348 -17447.348 -17604.765 -17604.765 304.53499 304.53499 43189.951 43189.951 -795.52536 -795.52536 6000 -17443.517 -17443.517 -17607.317 -17607.317 316.88339 316.88339 43194.053 43194.053 -1126.2085 -1126.2085 Loop time of 83.7382 on 1 procs for 1000 steps with 4000 atoms Performance: 1.032 ns/day, 23.261 hours/ns, 11.942 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 83.101 | 83.101 | 83.101 | 0.0 | 99.24 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.099669 | 0.099669 | 0.099669 | 0.0 | 0.12 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.49837 | 0.49837 | 0.49837 | 0.0 | 0.60 Other | | 0.03965 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5847 ave 5847 max 5847 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536638 ave 536638 max 536638 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536638 Ave neighs/atom = 134.16 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.738568696982, Press = 42.9353925891375 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -17443.517 -17443.517 -17607.317 -17607.317 316.88339 316.88339 43194.053 43194.053 -1126.2085 -1126.2085 7000 -17449.158 -17449.158 -17607.858 -17607.858 307.01667 307.01667 43095.026 43095.026 2743.259 2743.259 Loop time of 83.3519 on 1 procs for 1000 steps with 4000 atoms Performance: 1.037 ns/day, 23.153 hours/ns, 11.997 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 82.655 | 82.655 | 82.655 | 0.0 | 99.16 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13864 | 0.13864 | 0.13864 | 0.0 | 0.17 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.53904 | 0.53904 | 0.53904 | 0.0 | 0.65 Other | | 0.01931 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5845 ave 5845 max 5845 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536668 ave 536668 max 536668 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536668 Ave neighs/atom = 134.167 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.127136454092, Press = 21.6674355062652 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -17449.158 -17449.158 -17607.858 -17607.858 307.01667 307.01667 43095.026 43095.026 2743.259 2743.259 8000 -17445.099 -17445.099 -17609.147 -17609.147 317.36128 317.36128 43145.179 43145.179 725.16706 725.16706 Loop time of 83.8575 on 1 procs for 1000 steps with 4000 atoms Performance: 1.030 ns/day, 23.294 hours/ns, 11.925 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 83.333 | 83.333 | 83.333 | 0.0 | 99.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059018 | 0.059018 | 0.059018 | 0.0 | 0.07 Output | 2.5034e-05 | 2.5034e-05 | 2.5034e-05 | 0.0 | 0.00 Modify | 0.44606 | 0.44606 | 0.44606 | 0.0 | 0.53 Other | | 0.01926 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5855 ave 5855 max 5855 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536834 ave 536834 max 536834 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536834 Ave neighs/atom = 134.208 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.069372066299, Press = -14.9419081979031 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -17445.099 -17445.099 -17609.147 -17609.147 317.36128 317.36128 43145.179 43145.179 725.16706 725.16706 9000 -17443.068 -17443.068 -17607.41 -17607.41 317.93054 317.93054 43201.256 43201.256 -1382.2757 -1382.2757 Loop time of 83.3605 on 1 procs for 1000 steps with 4000 atoms Performance: 1.036 ns/day, 23.156 hours/ns, 11.996 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 82.587 | 82.587 | 82.587 | 0.0 | 99.07 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16001 | 0.16001 | 0.16001 | 0.0 | 0.19 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.55401 | 0.55401 | 0.55401 | 0.0 | 0.66 Other | | 0.05955 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5843 ave 5843 max 5843 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536696 ave 536696 max 536696 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536696 Ave neighs/atom = 134.174 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.994544539527, Press = -4.86122700150088 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -17443.068 -17443.068 -17607.41 -17607.41 317.93054 317.93054 43201.256 43201.256 -1382.2757 -1382.2757 10000 -17444.549 -17444.549 -17606.712 -17606.712 313.71413 313.71413 43180.202 43180.202 -574.76047 -574.76047 Loop time of 83.5736 on 1 procs for 1000 steps with 4000 atoms Performance: 1.034 ns/day, 23.215 hours/ns, 11.966 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 82.954 | 82.954 | 82.954 | 0.0 | 99.26 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2396 | 0.2396 | 0.2396 | 0.0 | 0.29 Output | 4.1008e-05 | 4.1008e-05 | 4.1008e-05 | 0.0 | 0.00 Modify | 0.36082 | 0.36082 | 0.36082 | 0.0 | 0.43 Other | | 0.01952 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5850 ave 5850 max 5850 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536632 ave 536632 max 536632 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536632 Ave neighs/atom = 134.158 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.966596356809, Press = 5.06945448772088 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -17444.549 -17444.549 -17606.712 -17606.712 313.71413 313.71413 43180.202 43180.202 -574.76047 -574.76047 11000 -17440.191 -17440.191 -17602.207 -17602.207 313.43124 313.43124 43153.032 43153.032 1156.7084 1156.7084 Loop time of 81.0821 on 1 procs for 1000 steps with 4000 atoms Performance: 1.066 ns/day, 22.523 hours/ns, 12.333 timesteps/s 34.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 80.463 | 80.463 | 80.463 | 0.0 | 99.24 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038936 | 0.038936 | 0.038936 | 0.0 | 0.05 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.50032 | 0.50032 | 0.50032 | 0.0 | 0.62 Other | | 0.0796 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5849 ave 5849 max 5849 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536608 ave 536608 max 536608 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536608 Ave neighs/atom = 134.152 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.058920711242, Press = 2.64781313921279 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -17440.191 -17440.191 -17602.207 -17602.207 313.43124 313.43124 43153.032 43153.032 1156.7084 1156.7084 12000 -17446.231 -17446.231 -17607.856 -17607.856 312.67433 312.67433 43135.012 43135.012 1253.4131 1253.4131 Loop time of 80.8519 on 1 procs for 1000 steps with 4000 atoms Performance: 1.069 ns/day, 22.459 hours/ns, 12.368 timesteps/s 34.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 80.283 | 80.283 | 80.283 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079207 | 0.079207 | 0.079207 | 0.0 | 0.10 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.40959 | 0.40959 | 0.40959 | 0.0 | 0.51 Other | | 0.07966 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5845 ave 5845 max 5845 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536742 ave 536742 max 536742 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536742 Ave neighs/atom = 134.185 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.29767865323, Press = -4.49257390499086 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -17446.231 -17446.231 -17607.856 -17607.856 312.67433 312.67433 43135.012 43135.012 1253.4131 1253.4131 13000 -17443.935 -17443.935 -17606.323 -17606.323 314.14958 314.14958 43235.811 43235.811 -2727.5622 -2727.5622 Loop time of 83.5368 on 1 procs for 1000 steps with 4000 atoms Performance: 1.034 ns/day, 23.205 hours/ns, 11.971 timesteps/s 33.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 82.877 | 82.877 | 82.877 | 0.0 | 99.21 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1195 | 0.1195 | 0.1195 | 0.0 | 0.14 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.44038 | 0.44038 | 0.44038 | 0.0 | 0.53 Other | | 0.09965 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5859 ave 5859 max 5859 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536636 ave 536636 max 536636 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536636 Ave neighs/atom = 134.159 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.304620077196, Press = -7.75308022913658 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -17443.935 -17443.935 -17606.323 -17606.323 314.14958 314.14958 43235.811 43235.811 -2727.5622 -2727.5622 14000 -17446.87 -17446.87 -17605.212 -17605.212 306.32238 306.32238 43193.893 43193.893 -1068.2425 -1068.2425 Loop time of 80.3784 on 1 procs for 1000 steps with 4000 atoms Performance: 1.075 ns/day, 22.327 hours/ns, 12.441 timesteps/s 34.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 79.789 | 79.789 | 79.789 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1399 | 0.1399 | 0.1399 | 0.0 | 0.17 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.39017 | 0.39017 | 0.39017 | 0.0 | 0.49 Other | | 0.05974 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5847 ave 5847 max 5847 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536610 ave 536610 max 536610 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536610 Ave neighs/atom = 134.153 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.244269109901, Press = 5.58972544821358 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -17446.87 -17446.87 -17605.212 -17605.212 306.32238 306.32238 43193.893 43193.893 -1068.2425 -1068.2425 15000 -17442.124 -17442.124 -17608.109 -17608.109 321.11012 321.11012 43147.981 43147.981 712.95262 712.95262 Loop time of 78.915 on 1 procs for 1000 steps with 4000 atoms Performance: 1.095 ns/day, 21.921 hours/ns, 12.672 timesteps/s 35.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 78.428 | 78.428 | 78.428 | 0.0 | 99.38 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11964 | 0.11964 | 0.11964 | 0.0 | 0.15 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.31824 | 0.31824 | 0.31824 | 0.0 | 0.40 Other | | 0.04939 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5865 ave 5865 max 5865 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536730 ave 536730 max 536730 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536730 Ave neighs/atom = 134.183 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.382052356406, Press = 2.33280065053171 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -17442.124 -17442.124 -17608.109 -17608.109 321.11012 321.11012 43147.981 43147.981 712.95262 712.95262 16000 -17450.146 -17450.146 -17609.645 -17609.645 308.56076 308.56076 43139.205 43139.205 756.51925 756.51925 Loop time of 79.3411 on 1 procs for 1000 steps with 4000 atoms Performance: 1.089 ns/day, 22.039 hours/ns, 12.604 timesteps/s 35.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 78.65 | 78.65 | 78.65 | 0.0 | 99.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12022 | 0.12022 | 0.12022 | 0.0 | 0.15 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.49118 | 0.49118 | 0.49118 | 0.0 | 0.62 Other | | 0.07995 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5847 ave 5847 max 5847 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536748 ave 536748 max 536748 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536748 Ave neighs/atom = 134.187 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.362642603022, Press = -1.75962302496344 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -17450.146 -17450.146 -17609.645 -17609.645 308.56076 308.56076 43139.205 43139.205 756.51925 756.51925 17000 -17445.406 -17445.406 -17608.644 -17608.644 315.79536 315.79536 43195.419 43195.419 -1351.4464 -1351.4464 Loop time of 76.0102 on 1 procs for 1000 steps with 4000 atoms Performance: 1.137 ns/day, 21.114 hours/ns, 13.156 timesteps/s 36.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 75.482 | 75.482 | 75.482 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.049479 | 0.049479 | 0.049479 | 0.0 | 0.07 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.41962 | 0.41962 | 0.41962 | 0.0 | 0.55 Other | | 0.05951 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5852 ave 5852 max 5852 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536734 ave 536734 max 536734 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536734 Ave neighs/atom = 134.184 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.193933682928, Press = -2.75501086270351 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -17445.406 -17445.406 -17608.644 -17608.644 315.79536 315.79536 43195.419 43195.419 -1351.4464 -1351.4464 18000 -17450.615 -17450.615 -17609.834 -17609.834 308.0204 308.0204 43218.691 43218.691 -2567.8567 -2567.8567 Loop time of 77.1773 on 1 procs for 1000 steps with 4000 atoms Performance: 1.120 ns/day, 21.438 hours/ns, 12.957 timesteps/s 36.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 76.588 | 76.588 | 76.588 | 0.0 | 99.24 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11912 | 0.11912 | 0.11912 | 0.0 | 0.15 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.45024 | 0.45024 | 0.45024 | 0.0 | 0.58 Other | | 0.01955 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5849 ave 5849 max 5849 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536632 ave 536632 max 536632 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536632 Ave neighs/atom = 134.158 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.143158258775, Press = 5.36880162520983 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -17450.615 -17450.615 -17609.834 -17609.834 308.0204 308.0204 43218.691 43218.691 -2567.8567 -2567.8567 19000 -17442.818 -17442.818 -17605.996 -17605.996 315.67956 315.67956 43123.116 43123.116 1931.5806 1931.5806 Loop time of 77.0193 on 1 procs for 1000 steps with 4000 atoms Performance: 1.122 ns/day, 21.394 hours/ns, 12.984 timesteps/s 36.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 76.281 | 76.281 | 76.281 | 0.0 | 99.04 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.18018 | 0.18018 | 0.18018 | 0.0 | 0.23 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.47838 | 0.47838 | 0.47838 | 0.0 | 0.62 Other | | 0.07971 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5848 ave 5848 max 5848 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536640 ave 536640 max 536640 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536640 Ave neighs/atom = 134.16 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.999850306965, Press = 5.76218359955371 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -17442.818 -17442.818 -17605.996 -17605.996 315.67956 315.67956 43123.116 43123.116 1931.5806 1931.5806 20000 -17446.866 -17446.866 -17608.043 -17608.043 311.80789 311.80789 43118.151 43118.151 1825.9795 1825.9795 Loop time of 74.0544 on 1 procs for 1000 steps with 4000 atoms Performance: 1.167 ns/day, 20.571 hours/ns, 13.504 timesteps/s 37.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 73.575 | 73.575 | 73.575 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.07941 | 0.07941 | 0.07941 | 0.0 | 0.11 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.36039 | 0.36039 | 0.36039 | 0.0 | 0.49 Other | | 0.03956 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5854 ave 5854 max 5854 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536766 ave 536766 max 536766 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536766 Ave neighs/atom = 134.191 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.030855493042, Press = -0.775263834283657 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -17446.866 -17446.866 -17608.043 -17608.043 311.80789 311.80789 43118.151 43118.151 1825.9795 1825.9795 21000 -17442.093 -17442.093 -17607.638 -17607.638 320.25792 320.25792 43186 43186 -781.20195 -781.20195 Loop time of 72.3873 on 1 procs for 1000 steps with 4000 atoms Performance: 1.194 ns/day, 20.108 hours/ns, 13.815 timesteps/s 38.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 71.917 | 71.917 | 71.917 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12198 | 0.12198 | 0.12198 | 0.0 | 0.17 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.26868 | 0.26868 | 0.26868 | 0.0 | 0.37 Other | | 0.07965 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5852 ave 5852 max 5852 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536740 ave 536740 max 536740 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536740 Ave neighs/atom = 134.185 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.138242603016, Press = -2.34982657765344 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -17442.093 -17442.093 -17607.638 -17607.638 320.25792 320.25792 43186 43186 -781.20195 -781.20195 22000 -17447.547 -17447.547 -17610.436 -17610.436 315.11877 315.11877 43199.153 43199.153 -1762.3922 -1762.3922 Loop time of 71.6622 on 1 procs for 1000 steps with 4000 atoms Performance: 1.206 ns/day, 19.906 hours/ns, 13.954 timesteps/s 39.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 71.223 | 71.223 | 71.223 | 0.0 | 99.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.099983 | 0.099983 | 0.099983 | 0.0 | 0.14 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.32005 | 0.32005 | 0.32005 | 0.0 | 0.45 Other | | 0.01956 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5859 ave 5859 max 5859 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536640 ave 536640 max 536640 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536640 Ave neighs/atom = 134.16 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.228842983436, Press = 0.668413479463059 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -17447.547 -17447.547 -17610.436 -17610.436 315.11877 315.11877 43199.153 43199.153 -1762.3922 -1762.3922 23000 -17446.693 -17446.693 -17608.111 -17608.111 312.2745 312.2745 43151.014 43151.014 539.09303 539.09303 Loop time of 72.2657 on 1 procs for 1000 steps with 4000 atoms Performance: 1.196 ns/day, 20.074 hours/ns, 13.838 timesteps/s 38.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 71.725 | 71.725 | 71.725 | 0.0 | 99.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12213 | 0.12213 | 0.12213 | 0.0 | 0.17 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.3789 | 0.3789 | 0.3789 | 0.0 | 0.52 Other | | 0.03945 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5845 ave 5845 max 5845 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536634 ave 536634 max 536634 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536634 Ave neighs/atom = 134.159 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.244963972516, Press = 2.76510196885271 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -17446.693 -17446.693 -17608.111 -17608.111 312.2745 312.2745 43151.014 43151.014 539.09303 539.09303 24000 -17446.232 -17446.232 -17610.146 -17610.146 317.10242 317.10242 43126.464 43126.464 1319.3424 1319.3424 Loop time of 71.2865 on 1 procs for 1000 steps with 4000 atoms Performance: 1.212 ns/day, 19.802 hours/ns, 14.028 timesteps/s 39.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 70.726 | 70.726 | 70.726 | 0.0 | 99.21 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10022 | 0.10022 | 0.10022 | 0.0 | 0.14 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.40484 | 0.40484 | 0.40484 | 0.0 | 0.57 Other | | 0.05561 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5859 ave 5859 max 5859 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536744 ave 536744 max 536744 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536744 Ave neighs/atom = 134.186 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 43164.9047588529 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0