# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.5222107768058777*${_u_distance} variable latticeconst_converted equal 3.5222107768058777*1 lattice fcc ${latticeconst_converted} lattice fcc 3.52221077680588 Lattice spacing in x,y,z = 3.52221 3.52221 3.52221 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (35.2221 35.2221 35.2221) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.00464201 secs variable mass_converted equal 58.6934*${_u_mass} variable mass_converted equal 58.6934*1 # specify which KIM Model to use pair_style kim SNAP_LiHuChen_2018_NiMo__MO_468686727341_000 pair_coeff * * Ni mass 1 ${mass_converted} mass 1 58.6934 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 43696.4368499719 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 43696.4368499719/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 43696.4368499719/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 43696.4368499719/(1*1*${_u_distance}) variable V0_metal equal 43696.4368499719/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 43696.4368499719*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 43696.4368499719 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.6 ghost atom cutoff = 6.6 binsize = 3.3, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -22992.781 -22992.781 -23123.637 -23123.637 253.15 253.15 43696.437 43696.437 3198.6382 3198.6382 1000 -22850.574 -22850.574 -22979.191 -22979.191 248.81902 248.81902 44153.577 44153.577 -666.80235 -666.80235 Loop time of 1618.76 on 1 procs for 1000 steps with 4000 atoms Performance: 0.053 ns/day, 449.655 hours/ns, 0.618 timesteps/s 59.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1618.4 | 1618.4 | 1618.4 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038173 | 0.038173 | 0.038173 | 0.0 | 0.00 Output | 5.6982e-05 | 5.6982e-05 | 5.6982e-05 | 0.0 | 0.00 Modify | 0.27139 | 0.27139 | 0.27139 | 0.0 | 0.02 Other | | 0.01868 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536000 ave 536000 max 536000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536000 Ave neighs/atom = 134 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -22850.574 -22850.574 -22979.191 -22979.191 248.81902 248.81902 44153.577 44153.577 -666.80235 -666.80235 2000 -22860.443 -22860.443 -22984.825 -22984.825 240.62519 240.62519 44099.568 44099.568 932.586 932.586 Loop time of 1589.66 on 1 procs for 1000 steps with 4000 atoms Performance: 0.054 ns/day, 441.572 hours/ns, 0.629 timesteps/s 58.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1589.3 | 1589.3 | 1589.3 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057165 | 0.057165 | 0.057165 | 0.0 | 0.00 Output | 4.3869e-05 | 4.3869e-05 | 4.3869e-05 | 0.0 | 0.00 Modify | 0.30817 | 0.30817 | 0.30817 | 0.0 | 0.02 Other | | 0.01834 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 427162 ave 427162 max 427162 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 427162 Ave neighs/atom = 106.79 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -22860.443 -22860.443 -22984.825 -22984.825 240.62519 240.62519 44099.568 44099.568 932.586 932.586 3000 -22857.096 -22857.096 -22991.175 -22991.175 259.38513 259.38513 44113.515 44113.515 -182.80468 -182.80468 Loop time of 1579.66 on 1 procs for 1000 steps with 4000 atoms Performance: 0.055 ns/day, 438.795 hours/ns, 0.633 timesteps/s 59.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1579.3 | 1579.3 | 1579.3 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.097266 | 0.097266 | 0.097266 | 0.0 | 0.01 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.28999 | 0.28999 | 0.28999 | 0.0 | 0.02 Other | | 0.01838 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 429902 ave 429902 max 429902 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 429902 Ave neighs/atom = 107.475 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -22857.096 -22857.096 -22991.175 -22991.175 259.38513 259.38513 44113.515 44113.515 -182.80468 -182.80468 4000 -22857.407 -22857.407 -22995.221 -22995.221 266.61026 266.61026 44138.538 44138.538 -1530.4619 -1530.4619 Loop time of 1585.99 on 1 procs for 1000 steps with 4000 atoms Performance: 0.054 ns/day, 440.553 hours/ns, 0.631 timesteps/s 59.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1585.6 | 1585.6 | 1585.6 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077146 | 0.077146 | 0.077146 | 0.0 | 0.00 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.29189 | 0.29189 | 0.29189 | 0.0 | 0.02 Other | | 0.01834 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428750 ave 428750 max 428750 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428750 Ave neighs/atom = 107.188 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -22857.407 -22857.407 -22995.221 -22995.221 266.61026 266.61026 44138.538 44138.538 -1530.4619 -1530.4619 5000 -22859.252 -22859.252 -22990.283 -22990.283 253.48866 253.48866 44099.174 44099.174 524.37669 524.37669 Loop time of 1587.66 on 1 procs for 1000 steps with 4000 atoms Performance: 0.054 ns/day, 441.018 hours/ns, 0.630 timesteps/s 59.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1587.3 | 1587.3 | 1587.3 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077064 | 0.077064 | 0.077064 | 0.0 | 0.00 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.25027 | 0.25027 | 0.25027 | 0.0 | 0.02 Other | | 0.05843 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 427694 ave 427694 max 427694 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 427694 Ave neighs/atom = 106.924 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 250.696322613053, Press = -582.447492810878 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -22859.252 -22859.252 -22990.283 -22990.283 253.48866 253.48866 44099.174 44099.174 524.37669 524.37669 6000 -22855.978 -22855.978 -22985.039 -22985.039 249.67709 249.67709 44156.09 44156.09 -1375.14 -1375.14 Loop time of 1602.92 on 1 procs for 1000 steps with 4000 atoms Performance: 0.054 ns/day, 445.255 hours/ns, 0.624 timesteps/s 58.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1602.6 | 1602.6 | 1602.6 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.056863 | 0.056863 | 0.056863 | 0.0 | 0.00 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.23473 | 0.23473 | 0.23473 | 0.0 | 0.01 Other | | 0.05827 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 429690 ave 429690 max 429690 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 429690 Ave neighs/atom = 107.422 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.733763130474, Press = -26.5644479841472 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -22855.978 -22855.978 -22985.039 -22985.039 249.67709 249.67709 44156.09 44156.09 -1375.14 -1375.14 7000 -22859.594 -22859.594 -22992.548 -22992.548 257.20826 257.20826 44083.365 44083.365 917.45462 917.45462 Loop time of 1587.24 on 1 procs for 1000 steps with 4000 atoms Performance: 0.054 ns/day, 440.900 hours/ns, 0.630 timesteps/s 58.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1586.9 | 1586.9 | 1586.9 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037256 | 0.037256 | 0.037256 | 0.0 | 0.00 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.24475 | 0.24475 | 0.24475 | 0.0 | 0.02 Other | | 0.01835 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 427236 ave 427236 max 427236 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 427236 Ave neighs/atom = 106.809 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.024607241354, Press = -8.0662832051612 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -22859.594 -22859.594 -22992.548 -22992.548 257.20826 257.20826 44083.365 44083.365 917.45462 917.45462 8000 -22857.629 -22857.629 -22988.061 -22988.061 252.32826 252.32826 44128.358 44128.358 -513.99096 -513.99096 Loop time of 1544.07 on 1 procs for 1000 steps with 4000 atoms Performance: 0.056 ns/day, 428.907 hours/ns, 0.648 timesteps/s 60.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1543.7 | 1543.7 | 1543.7 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.047306 | 0.047306 | 0.047306 | 0.0 | 0.00 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.28787 | 0.28787 | 0.28787 | 0.0 | 0.02 Other | | 0.05833 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 430200 ave 430200 max 430200 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 430200 Ave neighs/atom = 107.55 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.870517809323, Press = -14.9987949960289 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -22857.629 -22857.629 -22988.061 -22988.061 252.32826 252.32826 44128.358 44128.358 -513.99096 -513.99096 9000 -22863.166 -22863.166 -22995.836 -22995.836 256.65997 256.65997 44126.079 44126.079 -1211.1131 -1211.1131 Loop time of 1496.3 on 1 procs for 1000 steps with 4000 atoms Performance: 0.058 ns/day, 415.639 hours/ns, 0.668 timesteps/s 62.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1495.9 | 1495.9 | 1495.9 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.056907 | 0.056907 | 0.056907 | 0.0 | 0.00 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.28953 | 0.28953 | 0.28953 | 0.0 | 0.02 Other | | 0.0183 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 427916 ave 427916 max 427916 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 427916 Ave neighs/atom = 106.979 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.607054746152, Press = 1.22369566434723 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -22863.166 -22863.166 -22995.836 -22995.836 256.65997 256.65997 44126.079 44126.079 -1211.1131 -1211.1131 10000 -22858.22 -22858.22 -22991.109 -22991.109 257.08346 257.08346 44079.918 44079.918 1244.5725 1244.5725 Loop time of 1496.81 on 1 procs for 1000 steps with 4000 atoms Performance: 0.058 ns/day, 415.781 hours/ns, 0.668 timesteps/s 62.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1496.5 | 1496.5 | 1496.5 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.036921 | 0.036921 | 0.036921 | 0.0 | 0.00 Output | 4.3154e-05 | 4.3154e-05 | 4.3154e-05 | 0.0 | 0.00 Modify | 0.22086 | 0.22086 | 0.22086 | 0.0 | 0.01 Other | | 0.01829 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428124 ave 428124 max 428124 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428124 Ave neighs/atom = 107.031 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.723844754165, Press = -8.82328192142365 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -22858.22 -22858.22 -22991.109 -22991.109 257.08346 257.08346 44079.918 44079.918 1244.5725 1244.5725 11000 -22858.079 -22858.079 -22987.847 -22987.847 251.04569 251.04569 44153.443 44153.443 -1549.5988 -1549.5988 Loop time of 1486.89 on 1 procs for 1000 steps with 4000 atoms Performance: 0.058 ns/day, 413.026 hours/ns, 0.673 timesteps/s 62.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1486.6 | 1486.6 | 1486.6 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.048345 | 0.048345 | 0.048345 | 0.0 | 0.00 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.25548 | 0.25548 | 0.25548 | 0.0 | 0.02 Other | | 0.01825 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 430876 ave 430876 max 430876 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 430876 Ave neighs/atom = 107.719 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.958145410885, Press = -6.22832511345387 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -22858.079 -22858.079 -22987.847 -22987.847 251.04569 251.04569 44153.443 44153.443 -1549.5988 -1549.5988 12000 -22855.523 -22855.523 -22985.044 -22985.044 250.56577 250.56577 44096.303 44096.303 1112.0595 1112.0595 Loop time of 1333.01 on 1 procs for 1000 steps with 4000 atoms Performance: 0.065 ns/day, 370.280 hours/ns, 0.750 timesteps/s 70.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1332.7 | 1332.7 | 1332.7 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059823 | 0.059823 | 0.059823 | 0.0 | 0.00 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.22634 | 0.22634 | 0.22634 | 0.0 | 0.02 Other | | 0.01851 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 427394 ave 427394 max 427394 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 427394 Ave neighs/atom = 106.849 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.228054083658, Press = -0.289632929872705 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -22855.523 -22855.523 -22985.044 -22985.044 250.56577 250.56577 44096.303 44096.303 1112.0595 1112.0595 13000 -22857.785 -22857.785 -22990.301 -22990.301 256.36128 256.36128 44113.218 44113.218 -154.33115 -154.33115 Loop time of 1304.65 on 1 procs for 1000 steps with 4000 atoms Performance: 0.066 ns/day, 362.402 hours/ns, 0.766 timesteps/s 71.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1304.3 | 1304.3 | 1304.3 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058787 | 0.058787 | 0.058787 | 0.0 | 0.00 Output | 3.0041e-05 | 3.0041e-05 | 3.0041e-05 | 0.0 | 0.00 Modify | 0.29618 | 0.29618 | 0.29618 | 0.0 | 0.02 Other | | 0.01825 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 430162 ave 430162 max 430162 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 430162 Ave neighs/atom = 107.54 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.292954955572, Press = -5.60788937016235 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -22857.785 -22857.785 -22990.301 -22990.301 256.36128 256.36128 44113.218 44113.218 -154.33115 -154.33115 14000 -22860.464 -22860.464 -22989.863 -22989.863 250.33155 250.33155 44118.263 44118.263 -368.73424 -368.73424 Loop time of 1302.12 on 1 procs for 1000 steps with 4000 atoms Performance: 0.066 ns/day, 361.699 hours/ns, 0.768 timesteps/s 71.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1301.8 | 1301.8 | 1301.8 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077388 | 0.077388 | 0.077388 | 0.0 | 0.01 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.2144 | 0.2144 | 0.2144 | 0.0 | 0.02 Other | | 0.0182 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428968 ave 428968 max 428968 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428968 Ave neighs/atom = 107.242 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.288113754027, Press = -0.540552968841015 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -22860.464 -22860.464 -22989.863 -22989.863 250.33155 250.33155 44118.263 44118.263 -368.73424 -368.73424 15000 -22860.543 -22860.543 -22989.848 -22989.848 250.14817 250.14817 44099.654 44099.654 469.14985 469.14985 Loop time of 1231.18 on 1 procs for 1000 steps with 4000 atoms Performance: 0.070 ns/day, 341.993 hours/ns, 0.812 timesteps/s 76.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1230.9 | 1230.9 | 1230.9 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037032 | 0.037032 | 0.037032 | 0.0 | 0.00 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.21445 | 0.21445 | 0.21445 | 0.0 | 0.02 Other | | 0.01826 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428812 ave 428812 max 428812 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428812 Ave neighs/atom = 107.203 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.05123082742, Press = -3.41483195400693 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -22860.543 -22860.543 -22989.848 -22989.848 250.14817 250.14817 44099.654 44099.654 469.14985 469.14985 16000 -22856.41 -22856.41 -22984.473 -22984.473 247.74645 247.74645 44120.57 44120.57 84.216809 84.216809 Loop time of 1228.11 on 1 procs for 1000 steps with 4000 atoms Performance: 0.070 ns/day, 341.142 hours/ns, 0.814 timesteps/s 76.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1227.8 | 1227.8 | 1227.8 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.067355 | 0.067355 | 0.067355 | 0.0 | 0.01 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.23567 | 0.23567 | 0.23567 | 0.0 | 0.02 Other | | 0.01836 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 429860 ave 429860 max 429860 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 429860 Ave neighs/atom = 107.465 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.04942832899, Press = -2.55727577992228 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -22856.41 -22856.41 -22984.473 -22984.473 247.74645 247.74645 44120.57 44120.57 84.216809 84.216809 17000 -22859.595 -22859.595 -22988.94 -22988.94 250.22714 250.22714 44094.941 44094.941 774.09484 774.09484 Loop time of 1218.65 on 1 procs for 1000 steps with 4000 atoms Performance: 0.071 ns/day, 338.514 hours/ns, 0.821 timesteps/s 76.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1218.4 | 1218.4 | 1218.4 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037442 | 0.037442 | 0.037442 | 0.0 | 0.00 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.19492 | 0.19492 | 0.19492 | 0.0 | 0.02 Other | | 0.01831 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428742 ave 428742 max 428742 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428742 Ave neighs/atom = 107.186 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.128252919987, Press = -0.685260685720319 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -22859.595 -22859.595 -22988.94 -22988.94 250.22714 250.22714 44094.941 44094.941 774.09484 774.09484 18000 -22860.873 -22860.873 -22990.735 -22990.735 251.2279 251.2279 44122.448 44122.448 -593.50042 -593.50042 Loop time of 1225.93 on 1 procs for 1000 steps with 4000 atoms Performance: 0.070 ns/day, 340.535 hours/ns, 0.816 timesteps/s 76.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1225.6 | 1225.6 | 1225.6 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057112 | 0.057112 | 0.057112 | 0.0 | 0.00 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.21555 | 0.21555 | 0.21555 | 0.0 | 0.02 Other | | 0.03842 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 429856 ave 429856 max 429856 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 429856 Ave neighs/atom = 107.464 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.18409801735, Press = -3.8022378684553 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -22860.873 -22860.873 -22990.735 -22990.735 251.2279 251.2279 44122.448 44122.448 -593.50042 -593.50042 19000 -22857.302 -22857.302 -22989.98 -22989.98 256.67537 256.67537 44144.542 44144.542 -1338.2514 -1338.2514 Loop time of 1205.05 on 1 procs for 1000 steps with 4000 atoms Performance: 0.072 ns/day, 334.736 hours/ns, 0.830 timesteps/s 77.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1204.8 | 1204.8 | 1204.8 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057081 | 0.057081 | 0.057081 | 0.0 | 0.00 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.18937 | 0.18937 | 0.18937 | 0.0 | 0.02 Other | | 0.01833 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428382 ave 428382 max 428382 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428382 Ave neighs/atom = 107.096 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.129177115406, Press = 2.02004461987124 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -22857.302 -22857.302 -22989.98 -22989.98 256.67537 256.67537 44144.542 44144.542 -1338.2514 -1338.2514 20000 -22859.005 -22859.005 -22991.685 -22991.685 256.67879 256.67879 44046.284 44046.284 2517.2498 2517.2498 Loop time of 1426.98 on 1 procs for 1000 steps with 4000 atoms Performance: 0.061 ns/day, 396.384 hours/ns, 0.701 timesteps/s 65.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1426.6 | 1426.6 | 1426.6 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037426 | 0.037426 | 0.037426 | 0.0 | 0.00 Output | 3.7193e-05 | 3.7193e-05 | 3.7193e-05 | 0.0 | 0.00 Modify | 0.27545 | 0.27545 | 0.27545 | 0.0 | 0.02 Other | | 0.03857 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 427816 ave 427816 max 427816 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 427816 Ave neighs/atom = 106.954 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.00869444278, Press = -2.71741332770623 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -22859.005 -22859.005 -22991.685 -22991.685 256.67879 256.67879 44046.284 44046.284 2517.2498 2517.2498 21000 -22860.456 -22860.456 -22989.811 -22989.811 250.24611 250.24611 44137.331 44137.331 -1137.5926 -1137.5926 Loop time of 1573.88 on 1 procs for 1000 steps with 4000 atoms Performance: 0.055 ns/day, 437.188 hours/ns, 0.635 timesteps/s 59.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1573.6 | 1573.6 | 1573.6 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.07721 | 0.07721 | 0.07721 | 0.0 | 0.00 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.21483 | 0.21483 | 0.21483 | 0.0 | 0.01 Other | | 0.01908 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 431900 ave 431900 max 431900 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 431900 Ave neighs/atom = 107.975 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.015427799235, Press = -2.26213060005296 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -22860.456 -22860.456 -22989.811 -22989.811 250.24611 250.24611 44137.331 44137.331 -1137.5926 -1137.5926 22000 -22858.602 -22858.602 -22987.299 -22987.299 248.97257 248.97257 44100.506 44100.506 650.53551 650.53551 Loop time of 1594.92 on 1 procs for 1000 steps with 4000 atoms Performance: 0.054 ns/day, 443.033 hours/ns, 0.627 timesteps/s 58.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1594.5 | 1594.5 | 1594.5 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.078095 | 0.078095 | 0.078095 | 0.0 | 0.00 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.30634 | 0.30634 | 0.30634 | 0.0 | 0.02 Other | | 0.01827 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 427704 ave 427704 max 427704 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 427704 Ave neighs/atom = 106.926 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 44112.9652584242 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0