# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.5222107768058777*${_u_distance} variable latticeconst_converted equal 3.5222107768058777*1 lattice fcc ${latticeconst_converted} lattice fcc 3.52221077680588 Lattice spacing in x,y,z = 3.52221 3.52221 3.52221 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (35.2221 35.2221 35.2221) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000469923 secs variable mass_converted equal 58.6934*${_u_mass} variable mass_converted equal 58.6934*1 # specify which KIM Model to use pair_style kim SNAP_LiHuChen_2018_NiMo__MO_468686727341_000 pair_coeff * * Ni mass 1 ${mass_converted} mass 1 58.6934 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 43696.4368499719 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 43696.4368499719/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 43696.4368499719/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 43696.4368499719/(1*1*${_u_distance}) variable V0_metal equal 43696.4368499719/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 43696.4368499719*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 43696.4368499719 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 273.15*${_u_temperature} variable temp_converted equal 273.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 273.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "273.15 - 0.2" variable T_up equal "273.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.6 ghost atom cutoff = 6.6 binsize = 3.3, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -22982.443 -22982.443 -23123.637 -23123.637 273.15 273.15 43696.437 43696.437 3451.3463 3451.3463 1000 -22828.559 -22828.559 -22967.514 -22967.514 268.81692 268.81692 44194.603 44194.603 -912.71378 -912.71378 Loop time of 1602.02 on 1 procs for 1000 steps with 4000 atoms Performance: 0.054 ns/day, 445.006 hours/ns, 0.624 timesteps/s 59.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1601.7 | 1601.7 | 1601.7 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.049005 | 0.049005 | 0.049005 | 0.0 | 0.00 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.192 | 0.192 | 0.192 | 0.0 | 0.01 Other | | 0.03869 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536000 ave 536000 max 536000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536000 Ave neighs/atom = 134 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -22828.559 -22828.559 -22967.514 -22967.514 268.81692 268.81692 44194.603 44194.603 -912.71378 -912.71378 2000 -22839.415 -22839.415 -22974.553 -22974.553 261.4337 261.4337 44146.195 44146.195 308.10743 308.10743 Loop time of 1591.05 on 1 procs for 1000 steps with 4000 atoms Performance: 0.054 ns/day, 441.959 hours/ns, 0.629 timesteps/s 58.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1590.7 | 1590.7 | 1590.7 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057665 | 0.057665 | 0.057665 | 0.0 | 0.00 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.27169 | 0.27169 | 0.27169 | 0.0 | 0.02 Other | | 0.03856 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 425944 ave 425944 max 425944 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 425944 Ave neighs/atom = 106.486 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -22839.415 -22839.415 -22974.553 -22974.553 261.4337 261.4337 44146.195 44146.195 308.10743 308.10743 3000 -22835.556 -22835.556 -22981.46 -22981.46 282.26062 282.26062 44139.216 44139.216 38.280987 38.280987 Loop time of 1583.22 on 1 procs for 1000 steps with 4000 atoms Performance: 0.055 ns/day, 439.784 hours/ns, 0.632 timesteps/s 59.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1582.8 | 1582.8 | 1582.8 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057623 | 0.057623 | 0.057623 | 0.0 | 0.00 Output | 4.3154e-05 | 4.3154e-05 | 4.3154e-05 | 0.0 | 0.00 Modify | 0.34459 | 0.34459 | 0.34459 | 0.0 | 0.02 Other | | 0.01849 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 427928 ave 427928 max 427928 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 427928 Ave neighs/atom = 106.982 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -22835.556 -22835.556 -22981.46 -22981.46 282.26062 282.26062 44139.216 44139.216 38.280987 38.280987 4000 -22836.402 -22836.402 -22984.479 -22984.479 286.46495 286.46495 44153.382 44153.382 -789.74399 -789.74399 Loop time of 1594.4 on 1 procs for 1000 steps with 4000 atoms Performance: 0.054 ns/day, 442.888 hours/ns, 0.627 timesteps/s 58.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1593.9 | 1593.9 | 1593.9 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057637 | 0.057637 | 0.057637 | 0.0 | 0.00 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.38096 | 0.38096 | 0.38096 | 0.0 | 0.02 Other | | 0.0386 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428082 ave 428082 max 428082 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428082 Ave neighs/atom = 107.02 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -22836.402 -22836.402 -22984.479 -22984.479 286.46495 286.46495 44153.382 44153.382 -789.74399 -789.74399 5000 -22838.029 -22838.029 -22975.233 -22975.233 265.43017 265.43017 44180.597 44180.597 -1199.5486 -1199.5486 Loop time of 1587.58 on 1 procs for 1000 steps with 4000 atoms Performance: 0.054 ns/day, 440.995 hours/ns, 0.630 timesteps/s 58.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1587.3 | 1587.3 | 1587.3 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037647 | 0.037647 | 0.037647 | 0.0 | 0.00 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.19051 | 0.19051 | 0.19051 | 0.0 | 0.01 Other | | 0.01843 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 427400 ave 427400 max 427400 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 427400 Ave neighs/atom = 106.85 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 271.432505220884, Press = 465.641366530589 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -22838.029 -22838.029 -22975.233 -22975.233 265.43017 265.43017 44180.597 44180.597 -1199.5486 -1199.5486 6000 -22834.58 -22834.58 -22981.557 -22981.557 284.33656 284.33656 44134.975 44134.975 287.25794 287.25794 Loop time of 1588.64 on 1 procs for 1000 steps with 4000 atoms Performance: 0.054 ns/day, 441.289 hours/ns, 0.629 timesteps/s 58.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1588.3 | 1588.3 | 1588.3 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057266 | 0.057266 | 0.057266 | 0.0 | 0.00 Output | 2.6226e-05 | 2.6226e-05 | 2.6226e-05 | 0.0 | 0.00 Modify | 0.23425 | 0.23425 | 0.23425 | 0.0 | 0.01 Other | | 0.01829 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 426456 ave 426456 max 426456 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 426456 Ave neighs/atom = 106.614 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.714250014879, Press = -9.37744097883659 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -22834.58 -22834.58 -22981.557 -22981.557 284.33656 284.33656 44134.975 44134.975 287.25794 287.25794 7000 -22838.301 -22838.301 -22980.742 -22980.742 275.56299 275.56299 44117.605 44117.605 1006.9281 1006.9281 Loop time of 1580.77 on 1 procs for 1000 steps with 4000 atoms Performance: 0.055 ns/day, 439.104 hours/ns, 0.633 timesteps/s 59.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1580.5 | 1580.5 | 1580.5 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057624 | 0.057624 | 0.057624 | 0.0 | 0.00 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.2356 | 0.2356 | 0.2356 | 0.0 | 0.01 Other | | 0.01858 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428438 ave 428438 max 428438 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428438 Ave neighs/atom = 107.109 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.024390865121, Press = 46.8553651295936 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -22838.301 -22838.301 -22980.742 -22980.742 275.56299 275.56299 44117.605 44117.605 1006.9281 1006.9281 8000 -22836.379 -22836.379 -22973.342 -22973.342 264.96541 264.96541 44197.587 44197.587 -1741.7775 -1741.7775 Loop time of 1555.2 on 1 procs for 1000 steps with 4000 atoms Performance: 0.056 ns/day, 431.999 hours/ns, 0.643 timesteps/s 60.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1554.8 | 1554.8 | 1554.8 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057652 | 0.057652 | 0.057652 | 0.0 | 0.00 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.3209 | 0.3209 | 0.3209 | 0.0 | 0.02 Other | | 0.01858 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428982 ave 428982 max 428982 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428982 Ave neighs/atom = 107.246 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.892033348603, Press = 9.72958361886758 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -22836.379 -22836.379 -22973.342 -22973.342 264.96541 264.96541 44197.587 44197.587 -1741.7775 -1741.7775 9000 -22842.989 -22842.989 -22980.861 -22980.861 266.72301 266.72301 44111.802 44111.802 1077.8782 1077.8782 Loop time of 1484.36 on 1 procs for 1000 steps with 4000 atoms Performance: 0.058 ns/day, 412.323 hours/ns, 0.674 timesteps/s 62.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1484 | 1484 | 1484 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.097752 | 0.097752 | 0.097752 | 0.0 | 0.01 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.17517 | 0.17517 | 0.17517 | 0.0 | 0.01 Other | | 0.05844 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 425446 ave 425446 max 425446 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 425446 Ave neighs/atom = 106.362 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.560373864474, Press = 10.6401256886317 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -22842.989 -22842.989 -22980.861 -22980.861 266.72301 266.72301 44111.802 44111.802 1077.8782 1077.8782 10000 -22836.792 -22836.792 -22977.841 -22977.841 272.86879 272.86879 44162.377 44162.377 -653.65527 -653.65527 Loop time of 1491.54 on 1 procs for 1000 steps with 4000 atoms Performance: 0.058 ns/day, 414.316 hours/ns, 0.670 timesteps/s 62.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1491.2 | 1491.2 | 1491.2 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077735 | 0.077735 | 0.077735 | 0.0 | 0.01 Output | 0.0075221 | 0.0075221 | 0.0075221 | 0.0 | 0.00 Modify | 0.21649 | 0.21649 | 0.21649 | 0.0 | 0.01 Other | | 0.03838 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 429488 ave 429488 max 429488 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 429488 Ave neighs/atom = 107.372 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.670381484665, Press = 9.98505838465444 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -22836.792 -22836.792 -22977.841 -22977.841 272.86879 272.86879 44162.377 44162.377 -653.65527 -653.65527 11000 -22836.462 -22836.462 -22978.784 -22978.784 275.33142 275.33142 44146.68 44146.68 -85.634265 -85.634265 Loop time of 1482.15 on 1 procs for 1000 steps with 4000 atoms Performance: 0.058 ns/day, 411.710 hours/ns, 0.675 timesteps/s 63.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1481.8 | 1481.8 | 1481.8 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057552 | 0.057552 | 0.057552 | 0.0 | 0.00 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.2666 | 0.2666 | 0.2666 | 0.0 | 0.02 Other | | 0.01843 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 426960 ave 426960 max 426960 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 426960 Ave neighs/atom = 106.74 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.936969620632, Press = 4.88861245775282 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -22836.462 -22836.462 -22978.784 -22978.784 275.33142 275.33142 44146.68 44146.68 -85.634265 -85.634265 12000 -22836.306 -22836.306 -22978.784 -22978.784 275.63412 275.63412 44135.164 44135.164 379.40769 379.40769 Loop time of 1339.02 on 1 procs for 1000 steps with 4000 atoms Performance: 0.065 ns/day, 371.950 hours/ns, 0.747 timesteps/s 70.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1338.7 | 1338.7 | 1338.7 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057936 | 0.057936 | 0.057936 | 0.0 | 0.00 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.17582 | 0.17582 | 0.17582 | 0.0 | 0.01 Other | | 0.03877 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428038 ave 428038 max 428038 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428038 Ave neighs/atom = 107.01 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.205498543748, Press = 8.52597359925904 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -22836.306 -22836.306 -22978.784 -22978.784 275.63412 275.63412 44135.164 44135.164 379.40769 379.40769 13000 -22836.676 -22836.676 -22976.671 -22976.671 270.83072 270.83072 44187.15 44187.15 -1562.1951 -1562.1951 Loop time of 1318.09 on 1 procs for 1000 steps with 4000 atoms Performance: 0.066 ns/day, 366.135 hours/ns, 0.759 timesteps/s 70.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1317.8 | 1317.8 | 1317.8 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037498 | 0.037498 | 0.037498 | 0.0 | 0.00 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.24559 | 0.24559 | 0.24559 | 0.0 | 0.02 Other | | 0.0385 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428392 ave 428392 max 428392 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428392 Ave neighs/atom = 107.098 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.216463174511, Press = 3.46593636463062 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -22836.676 -22836.676 -22976.671 -22976.671 270.83072 270.83072 44187.15 44187.15 -1562.1951 -1562.1951 14000 -22836.51 -22836.51 -22976.499 -22976.499 270.81822 270.81822 44095.637 44095.637 2256.443 2256.443 Loop time of 1303.63 on 1 procs for 1000 steps with 4000 atoms Performance: 0.066 ns/day, 362.119 hours/ns, 0.767 timesteps/s 71.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1303.3 | 1303.3 | 1303.3 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077756 | 0.077756 | 0.077756 | 0.0 | 0.01 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.21562 | 0.21562 | 0.21562 | 0.0 | 0.02 Other | | 0.01847 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 426260 ave 426260 max 426260 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 426260 Ave neighs/atom = 106.565 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.223124834428, Press = -0.504084517434404 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -22836.51 -22836.51 -22976.499 -22976.499 270.81822 270.81822 44095.637 44095.637 2256.443 2256.443 15000 -22841.029 -22841.029 -22981.62 -22981.62 271.98295 271.98295 44137.531 44137.531 -28.836535 -28.836535 Loop time of 1234.41 on 1 procs for 1000 steps with 4000 atoms Performance: 0.070 ns/day, 342.890 hours/ns, 0.810 timesteps/s 75.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1234.1 | 1234.1 | 1234.1 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058212 | 0.058212 | 0.058212 | 0.0 | 0.00 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.21615 | 0.21615 | 0.21615 | 0.0 | 0.02 Other | | 0.01864 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 430334 ave 430334 max 430334 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 430334 Ave neighs/atom = 107.584 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.207003282, Press = 8.65118176593511 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -22841.029 -22841.029 -22981.62 -22981.62 271.98295 271.98295 44137.531 44137.531 -28.836535 -28.836535 16000 -22835.487 -22835.487 -22980.37 -22980.37 280.28572 280.28572 44173.8 44173.8 -1294.0551 -1294.0551 Loop time of 1213.71 on 1 procs for 1000 steps with 4000 atoms Performance: 0.071 ns/day, 337.141 hours/ns, 0.824 timesteps/s 77.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1213.4 | 1213.4 | 1213.4 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037861 | 0.037861 | 0.037861 | 0.0 | 0.00 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.23649 | 0.23649 | 0.23649 | 0.0 | 0.02 Other | | 0.03857 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 427986 ave 427986 max 427986 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 427986 Ave neighs/atom = 106.996 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.118760415353, Press = 1.63246299880464 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -22835.487 -22835.487 -22980.37 -22980.37 280.28572 280.28572 44173.8 44173.8 -1294.0551 -1294.0551 17000 -22844.15 -22844.15 -22981.334 -22981.334 265.39234 265.39234 44107.12 44107.12 1167.2182 1167.2182 Loop time of 1221.86 on 1 procs for 1000 steps with 4000 atoms Performance: 0.071 ns/day, 339.404 hours/ns, 0.818 timesteps/s 76.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1221.6 | 1221.6 | 1221.6 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057746 | 0.057746 | 0.057746 | 0.0 | 0.00 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.17487 | 0.17487 | 0.17487 | 0.0 | 0.01 Other | | 0.0383 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 426580 ave 426580 max 426580 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 426580 Ave neighs/atom = 106.645 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.000686949458, Press = 2.78537094484719 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -22844.15 -22844.15 -22981.334 -22981.334 265.39234 265.39234 44107.12 44107.12 1167.2182 1167.2182 18000 -22835.969 -22835.969 -22976.895 -22976.895 272.6327 272.6327 44161.847 44161.847 -521.70816 -521.70816 Loop time of 1198.16 on 1 procs for 1000 steps with 4000 atoms Performance: 0.072 ns/day, 332.823 hours/ns, 0.835 timesteps/s 77.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1197.9 | 1197.9 | 1197.9 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057672 | 0.057672 | 0.057672 | 0.0 | 0.00 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.15386 | 0.15386 | 0.15386 | 0.0 | 0.01 Other | | 0.01822 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 429766 ave 429766 max 429766 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 429766 Ave neighs/atom = 107.442 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.937988091205, Press = 5.48781727309978 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -22835.969 -22835.969 -22976.895 -22976.895 272.6327 272.6327 44161.847 44161.847 -521.70816 -521.70816 19000 -22838.948 -22838.948 -22977.093 -22977.093 267.25087 267.25087 44159.498 44159.498 -501.04446 -501.04446 Loop time of 1218.11 on 1 procs for 1000 steps with 4000 atoms Performance: 0.071 ns/day, 338.365 hours/ns, 0.821 timesteps/s 76.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1217.9 | 1217.9 | 1217.9 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037679 | 0.037679 | 0.037679 | 0.0 | 0.00 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.19529 | 0.19529 | 0.19529 | 0.0 | 0.02 Other | | 0.01862 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 427364 ave 427364 max 427364 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 427364 Ave neighs/atom = 106.841 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.847166775601, Press = -1.24710193740619 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -22838.948 -22838.948 -22977.093 -22977.093 267.25087 267.25087 44159.498 44159.498 -501.04446 -501.04446 20000 -22837.304 -22837.304 -22978.312 -22978.312 272.78976 272.78976 44039.528 44039.528 4480.3649 4480.3649 Loop time of 1412.95 on 1 procs for 1000 steps with 4000 atoms Performance: 0.061 ns/day, 392.486 hours/ns, 0.708 timesteps/s 66.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1412.7 | 1412.7 | 1412.7 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.05764 | 0.05764 | 0.05764 | 0.0 | 0.00 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.19551 | 0.19551 | 0.19551 | 0.0 | 0.01 Other | | 0.03846 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428156 ave 428156 max 428156 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428156 Ave neighs/atom = 107.039 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.92670958276, Press = 5.96266556506985 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -22837.304 -22837.304 -22978.312 -22978.312 272.78976 272.78976 44039.528 44039.528 4480.3649 4480.3649 21000 -22836.502 -22836.502 -22978.266 -22978.266 274.25227 274.25227 44193.026 44193.026 -1943.5907 -1943.5907 Loop time of 1589.35 on 1 procs for 1000 steps with 4000 atoms Performance: 0.054 ns/day, 441.485 hours/ns, 0.629 timesteps/s 58.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1588.9 | 1588.9 | 1588.9 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.097311 | 0.097311 | 0.097311 | 0.0 | 0.01 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.27085 | 0.27085 | 0.27085 | 0.0 | 0.02 Other | | 0.07836 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 433084 ave 433084 max 433084 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 433084 Ave neighs/atom = 108.271 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.915165312072, Press = 3.80189155679469 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -22836.502 -22836.502 -22978.266 -22978.266 274.25227 274.25227 44193.026 44193.026 -1943.5907 -1943.5907 22000 -22842.251 -22842.251 -22979.814 -22979.814 266.12474 266.12474 44125.383 44125.383 605.37182 605.37182 Loop time of 1595.47 on 1 procs for 1000 steps with 4000 atoms Performance: 0.054 ns/day, 443.186 hours/ns, 0.627 timesteps/s 58.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1595.1 | 1595.1 | 1595.1 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077813 | 0.077813 | 0.077813 | 0.0 | 0.00 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.2657 | 0.2657 | 0.2657 | 0.0 | 0.02 Other | | 0.03846 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 425754 ave 425754 max 425754 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 425754 Ave neighs/atom = 106.439 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.875894724418, Press = 0.308766708134284 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -22842.251 -22842.251 -22979.814 -22979.814 266.12474 266.12474 44125.383 44125.383 605.37182 605.37182 23000 -22835.341 -22835.341 -22976.041 -22976.041 272.19374 272.19374 44133.79 44133.79 697.48919 697.48919 Loop time of 1497.3 on 1 procs for 1000 steps with 4000 atoms Performance: 0.058 ns/day, 415.917 hours/ns, 0.668 timesteps/s 62.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1497 | 1497 | 1497 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057486 | 0.057486 | 0.057486 | 0.0 | 0.00 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.22476 | 0.22476 | 0.22476 | 0.0 | 0.02 Other | | 0.01832 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428498 ave 428498 max 428498 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428498 Ave neighs/atom = 107.124 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.812340476083, Press = 4.16202056584099 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -22835.341 -22835.341 -22976.041 -22976.041 272.19374 272.19374 44133.79 44133.79 697.48919 697.48919 24000 -22838.702 -22838.702 -22977.178 -22977.178 267.88995 267.88995 44165.83 44165.83 -814.81005 -814.81005 Loop time of 1499.02 on 1 procs for 1000 steps with 4000 atoms Performance: 0.058 ns/day, 416.395 hours/ns, 0.667 timesteps/s 62.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1498.7 | 1498.7 | 1498.7 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037361 | 0.037361 | 0.037361 | 0.0 | 0.00 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.25435 | 0.25435 | 0.25435 | 0.0 | 0.02 Other | | 0.01823 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428330 ave 428330 max 428330 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428330 Ave neighs/atom = 107.082 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.876347408177, Press = 1.74768942990812 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -22838.702 -22838.702 -22977.178 -22977.178 267.88995 267.88995 44165.83 44165.83 -814.81005 -814.81005 25000 -22833.555 -22833.555 -22976.332 -22976.332 276.21037 276.21037 44104.002 44104.002 1969.441 1969.441 Loop time of 1479.15 on 1 procs for 1000 steps with 4000 atoms Performance: 0.058 ns/day, 410.875 hours/ns, 0.676 timesteps/s 63.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1478.9 | 1478.9 | 1478.9 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.03795 | 0.03795 | 0.03795 | 0.0 | 0.00 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.19505 | 0.19505 | 0.19505 | 0.0 | 0.01 Other | | 0.01846 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 427178 ave 427178 max 427178 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 427178 Ave neighs/atom = 106.794 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.97300449223, Press = 1.80071728130205 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -22833.555 -22833.555 -22976.332 -22976.332 276.21037 276.21037 44104.002 44104.002 1969.441 1969.441 26000 -22838.895 -22838.895 -22979.785 -22979.785 272.56117 272.56117 44178.406 44178.406 -1491.1504 -1491.1504 Loop time of 1407.18 on 1 procs for 1000 steps with 4000 atoms Performance: 0.061 ns/day, 390.883 hours/ns, 0.711 timesteps/s 66.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1406.9 | 1406.9 | 1406.9 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037627 | 0.037627 | 0.037627 | 0.0 | 0.00 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.2377 | 0.2377 | 0.2377 | 0.0 | 0.02 Other | | 0.01832 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 430132 ave 430132 max 430132 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 430132 Ave neighs/atom = 107.533 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.048351215716, Press = 5.44098287172794 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.37 | 5.37 | 5.37 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 26000 -22838.895 -22838.895 -22979.785 -22979.785 272.56117 272.56117 44178.406 44178.406 -1491.1504 -1491.1504 27000 -22831.268 -22831.268 -22976.554 -22976.554 281.06717 281.06717 44176.111 44176.111 -959.72707 -959.72707 Loop time of 1392.09 on 1 procs for 1000 steps with 4000 atoms Performance: 0.062 ns/day, 386.692 hours/ns, 0.718 timesteps/s 66.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1391.8 | 1391.8 | 1391.8 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037821 | 0.037821 | 0.037821 | 0.0 | 0.00 Output | 4.7922e-05 | 4.7922e-05 | 4.7922e-05 | 0.0 | 0.00 Modify | 0.23499 | 0.23499 | 0.23499 | 0.0 | 0.02 Other | | 0.03854 | | | 0.00 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 426616 ave 426616 max 426616 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 426616 Ave neighs/atom = 106.654 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T273.15.out" else "print 'not_converged' file output/vol_T273.15.out" print '${V}' file output/vol_T273.15.out 44146.488496184 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0