# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.519999995827675*${_u_distance} variable latticeconst_converted equal 3.519999995827675*1 lattice fcc ${latticeconst_converted} lattice fcc 3.51999999582767 Lattice spacing in x,y,z = 3.52 3.52 3.52 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (35.2 35.2 35.2) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000464916 secs variable mass_converted equal 58.6934*${_u_mass} variable mass_converted equal 58.6934*1 # specify which KIM Model to use pair_style meam/c pair_coeff * * ./SM_168413969663_000-files/b'library.meam' Ni ./SM_168413969663_000-files/b'Ni.meam' Ni Reading potential file ./SM_168413969663_000-files/b'library.meam' with DATE: 2012-06-29 Reading potential file ./SM_168413969663_000-files/b'Ni.meam' with DATE: 2007-06-11 mass 1 ${mass_converted} mass 1 58.6934 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 43614.2078449095 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 43614.2078449095/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 43614.2078449095/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 43614.2078449095/(1*1*${_u_distance}) variable V0_metal equal 43614.2078449095/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 43614.2078449095*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 43614.2078449095 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 2 neighbor lists, perpetual/occasional/extra = 2 0 0 (1) pair meam/c, perpetual attributes: full, newton on pair build: full/bin/atomonly stencil: full/bin/3d bin: standard (2) pair meam/c, perpetual, half/full from (1) attributes: half, newton on pair build: halffull/newton stencil: none bin: none Per MPI rank memory allocation (min/avg/max) = 15.01 | 15.01 | 15.01 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -17638.129 -17638.129 -17800 -17800 313.15 313.15 43614.208 43614.208 3964.23 3964.23 1000 -17467.709 -17467.709 -17629.921 -17629.921 313.80951 313.80951 43961.047 43961.047 1436.9738 1436.9738 Loop time of 64.1936 on 1 procs for 1000 steps with 4000 atoms Performance: 1.346 ns/day, 17.832 hours/ns, 15.578 timesteps/s 59.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.804 | 63.804 | 63.804 | 0.0 | 99.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.089813 | 0.089813 | 0.089813 | 0.0 | 0.14 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.27976 | 0.27976 | 0.27976 | 0.0 | 0.44 Other | | 0.02012 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 156000 ave 156000 max 156000 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 312000 ave 312000 max 312000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 312000 Ave neighs/atom = 78 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.04 | 15.04 | 15.04 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -17467.709 -17467.709 -17629.921 -17629.921 313.80951 313.80951 43961.047 43961.047 1436.9738 1436.9738 2000 -17470.471 -17470.471 -17630.489 -17630.489 309.56513 309.56513 44004.885 44004.885 -623.225 -623.225 Loop time of 69.9865 on 1 procs for 1000 steps with 4000 atoms Performance: 1.235 ns/day, 19.441 hours/ns, 14.288 timesteps/s 57.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.647 | 69.647 | 69.647 | 0.0 | 99.52 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.060166 | 0.060166 | 0.060166 | 0.0 | 0.09 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.25845 | 0.25845 | 0.25845 | 0.0 | 0.37 Other | | 0.02058 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157486 ave 157486 max 157486 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314972 ave 314972 max 314972 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314972 Ave neighs/atom = 78.743 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.04 | 15.04 | 15.04 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -17470.471 -17470.471 -17630.489 -17630.489 309.56513 309.56513 44004.885 44004.885 -623.225 -623.225 3000 -17477.346 -17477.346 -17640.329 -17640.329 315.30329 315.30329 44014.537 44014.537 -1130.5507 -1130.5507 Loop time of 70.5092 on 1 procs for 1000 steps with 4000 atoms Performance: 1.225 ns/day, 19.586 hours/ns, 14.183 timesteps/s 57.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 70.2 | 70.2 | 70.2 | 0.0 | 99.56 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070071 | 0.070071 | 0.070071 | 0.0 | 0.10 Output | 4.3869e-05 | 4.3869e-05 | 4.3869e-05 | 0.0 | 0.00 Modify | 0.19906 | 0.19906 | 0.19906 | 0.0 | 0.28 Other | | 0.04006 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157452 ave 157452 max 157452 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314904 ave 314904 max 314904 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314904 Ave neighs/atom = 78.726 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.04 | 15.04 | 15.04 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -17477.346 -17477.346 -17640.329 -17640.329 315.30329 315.30329 44014.537 44014.537 -1130.5507 -1130.5507 4000 -17468.987 -17468.987 -17634.025 -17634.025 319.27647 319.27647 44012.452 44012.452 -967.17642 -967.17642 Loop time of 68.5304 on 1 procs for 1000 steps with 4000 atoms Performance: 1.261 ns/day, 19.036 hours/ns, 14.592 timesteps/s 59.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.08 | 68.08 | 68.08 | 0.0 | 99.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10046 | 0.10046 | 0.10046 | 0.0 | 0.15 Output | 6.0081e-05 | 6.0081e-05 | 6.0081e-05 | 0.0 | 0.00 Modify | 0.32914 | 0.32914 | 0.32914 | 0.0 | 0.48 Other | | 0.02028 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157298 ave 157298 max 157298 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314596 ave 314596 max 314596 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314596 Ave neighs/atom = 78.649 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.04 | 15.04 | 15.04 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -17468.987 -17468.987 -17634.025 -17634.025 319.27647 319.27647 44012.452 44012.452 -967.17642 -967.17642 5000 -17474.562 -17474.562 -17637.887 -17637.887 315.96316 315.96316 43952.995 43952.995 1169.1473 1169.1473 Loop time of 72.6098 on 1 procs for 1000 steps with 4000 atoms Performance: 1.190 ns/day, 20.169 hours/ns, 13.772 timesteps/s 56.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 72.276 | 72.276 | 72.276 | 0.0 | 99.54 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.08135 | 0.08135 | 0.08135 | 0.0 | 0.11 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.23178 | 0.23178 | 0.23178 | 0.0 | 0.32 Other | | 0.02036 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157449 ave 157449 max 157449 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314898 ave 314898 max 314898 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314898 Ave neighs/atom = 78.7245 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 309.846592667232, Press = 760.422790022433 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -17474.562 -17474.562 -17637.887 -17637.887 315.96316 315.96316 43952.995 43952.995 1169.1473 1169.1473 6000 -17474.861 -17474.861 -17635.439 -17635.439 310.64951 310.64951 43954.363 43954.363 1400.9984 1400.9984 Loop time of 70.1358 on 1 procs for 1000 steps with 4000 atoms Performance: 1.232 ns/day, 19.482 hours/ns, 14.258 timesteps/s 57.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.721 | 69.721 | 69.721 | 0.0 | 99.41 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.080306 | 0.080306 | 0.080306 | 0.0 | 0.11 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.31437 | 0.31437 | 0.31437 | 0.0 | 0.45 Other | | 0.02027 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157556 ave 157556 max 157556 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 315112 ave 315112 max 315112 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 315112 Ave neighs/atom = 78.778 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.33828477581, Press = 24.7613114242199 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -17474.861 -17474.861 -17635.439 -17635.439 310.64951 310.64951 43954.363 43954.363 1400.9984 1400.9984 7000 -17469.375 -17469.375 -17634.158 -17634.158 318.7842 318.7842 43977.787 43977.787 530.86943 530.86943 Loop time of 69.7439 on 1 procs for 1000 steps with 4000 atoms Performance: 1.239 ns/day, 19.373 hours/ns, 14.338 timesteps/s 57.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.44 | 69.44 | 69.44 | 0.0 | 99.57 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.040034 | 0.040034 | 0.040034 | 0.0 | 0.06 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.24314 | 0.24314 | 0.24314 | 0.0 | 0.35 Other | | 0.02017 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157543 ave 157543 max 157543 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 315086 ave 315086 max 315086 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 315086 Ave neighs/atom = 78.7715 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.158844108677, Press = -3.15519445355639 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -17469.375 -17469.375 -17634.158 -17634.158 318.7842 318.7842 43977.787 43977.787 530.86943 530.86943 8000 -17473.343 -17473.343 -17636.396 -17636.396 315.43745 315.43745 44032.896 44032.896 -1736.0504 -1736.0504 Loop time of 62.9894 on 1 procs for 1000 steps with 4000 atoms Performance: 1.372 ns/day, 17.497 hours/ns, 15.876 timesteps/s 64.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 62.615 | 62.615 | 62.615 | 0.0 | 99.41 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.060472 | 0.060472 | 0.060472 | 0.0 | 0.10 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.27311 | 0.27311 | 0.27311 | 0.0 | 0.43 Other | | 0.04049 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157489 ave 157489 max 157489 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314978 ave 314978 max 314978 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314978 Ave neighs/atom = 78.7445 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.010528551465, Press = -6.82586231475373 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -17473.343 -17473.343 -17636.396 -17636.396 315.43745 315.43745 44032.896 44032.896 -1736.0504 -1736.0504 9000 -17472.191 -17472.191 -17630.483 -17630.483 306.22659 306.22659 44066.533 44066.533 -2702.5972 -2702.5972 Loop time of 72.1619 on 1 procs for 1000 steps with 4000 atoms Performance: 1.197 ns/day, 20.045 hours/ns, 13.858 timesteps/s 56.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 71.678 | 71.678 | 71.678 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.060338 | 0.060338 | 0.060338 | 0.0 | 0.08 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.36319 | 0.36319 | 0.36319 | 0.0 | 0.50 Other | | 0.0602 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157339 ave 157339 max 157339 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314678 ave 314678 max 314678 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314678 Ave neighs/atom = 78.6695 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.248898436321, Press = 12.6629895595982 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -17472.191 -17472.191 -17630.483 -17630.483 306.22659 306.22659 44066.533 44066.533 -2702.5972 -2702.5972 10000 -17472.283 -17472.283 -17633.614 -17633.614 312.10597 312.10597 43988.103 43988.103 15.285371 15.285371 Loop time of 63.666 on 1 procs for 1000 steps with 4000 atoms Performance: 1.357 ns/day, 17.685 hours/ns, 15.707 timesteps/s 63.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.302 | 63.302 | 63.302 | 0.0 | 99.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059943 | 0.059943 | 0.059943 | 0.0 | 0.09 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.28383 | 0.28383 | 0.28383 | 0.0 | 0.45 Other | | 0.0199 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157354 ave 157354 max 157354 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314708 ave 314708 max 314708 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314708 Ave neighs/atom = 78.677 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.223292257738, Press = 15.6011942349316 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -17472.283 -17472.283 -17633.614 -17633.614 312.10597 312.10597 43988.103 43988.103 15.285371 15.285371 11000 -17468.788 -17468.788 -17633.9 -17633.9 319.42012 319.42012 43978.184 43978.184 571.39555 571.39555 Loop time of 63.7272 on 1 procs for 1000 steps with 4000 atoms Performance: 1.356 ns/day, 17.702 hours/ns, 15.692 timesteps/s 63.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.302 | 63.302 | 63.302 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.080554 | 0.080554 | 0.080554 | 0.0 | 0.13 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.32439 | 0.32439 | 0.32439 | 0.0 | 0.51 Other | | 0.02014 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157448 ave 157448 max 157448 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314896 ave 314896 max 314896 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314896 Ave neighs/atom = 78.724 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.115314171533, Press = 7.57973456849818 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -17468.788 -17468.788 -17633.9 -17633.9 319.42012 319.42012 43978.184 43978.184 571.39555 571.39555 12000 -17475.273 -17475.273 -17635.008 -17635.008 309.0178 309.0178 43966.503 43966.503 806.93508 806.93508 Loop time of 61.8684 on 1 procs for 1000 steps with 4000 atoms Performance: 1.397 ns/day, 17.186 hours/ns, 16.163 timesteps/s 65.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 61.494 | 61.494 | 61.494 | 0.0 | 99.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.093192 | 0.093192 | 0.093192 | 0.0 | 0.15 Output | 3.7909e-05 | 3.7909e-05 | 3.7909e-05 | 0.0 | 0.00 Modify | 0.22116 | 0.22116 | 0.22116 | 0.0 | 0.36 Other | | 0.06016 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157518 ave 157518 max 157518 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 315036 ave 315036 max 315036 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 315036 Ave neighs/atom = 78.759 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.309526444488, Press = 4.85995590105506 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -17475.273 -17475.273 -17635.008 -17635.008 309.0178 309.0178 43966.503 43966.503 806.93508 806.93508 13000 -17468.97 -17468.97 -17634.198 -17634.198 319.64619 319.64619 43971.823 43971.823 647.29465 647.29465 Loop time of 60.9625 on 1 procs for 1000 steps with 4000 atoms Performance: 1.417 ns/day, 16.934 hours/ns, 16.404 timesteps/s 66.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.556 | 60.556 | 60.556 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.090611 | 0.090611 | 0.090611 | 0.0 | 0.15 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.29493 | 0.29493 | 0.29493 | 0.0 | 0.48 Other | | 0.02073 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157470 ave 157470 max 157470 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314940 ave 314940 max 314940 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314940 Ave neighs/atom = 78.735 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.380762112939, Press = 0.593088602184194 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -17468.97 -17468.97 -17634.198 -17634.198 319.64619 319.64619 43971.823 43971.823 647.29465 647.29465 14000 -17475.289 -17475.289 -17636.82 -17636.82 312.49299 312.49299 44003.41 44003.41 -812.15986 -812.15986 Loop time of 65.8543 on 1 procs for 1000 steps with 4000 atoms Performance: 1.312 ns/day, 18.293 hours/ns, 15.185 timesteps/s 61.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 65.413 | 65.413 | 65.413 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.075749 | 0.075749 | 0.075749 | 0.0 | 0.12 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.34459 | 0.34459 | 0.34459 | 0.0 | 0.52 Other | | 0.02056 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157496 ave 157496 max 157496 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314992 ave 314992 max 314992 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314992 Ave neighs/atom = 78.748 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.430687760126, Press = -2.64981386995762 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -17475.289 -17475.289 -17636.82 -17636.82 312.49299 312.49299 44003.41 44003.41 -812.15986 -812.15986 15000 -17472.53 -17472.53 -17634.934 -17634.934 314.18041 314.18041 44058.904 44058.904 -2667.9134 -2667.9134 Loop time of 62.2733 on 1 procs for 1000 steps with 4000 atoms Performance: 1.387 ns/day, 17.298 hours/ns, 16.058 timesteps/s 64.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 61.89 | 61.89 | 61.89 | 0.0 | 99.38 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.080068 | 0.080068 | 0.080068 | 0.0 | 0.13 Output | 4.1008e-05 | 4.1008e-05 | 4.1008e-05 | 0.0 | 0.00 Modify | 0.28315 | 0.28315 | 0.28315 | 0.0 | 0.45 Other | | 0.0201 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157359 ave 157359 max 157359 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314718 ave 314718 max 314718 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314718 Ave neighs/atom = 78.6795 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.633488303664, Press = 1.63433385556208 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -17472.53 -17472.53 -17634.934 -17634.934 314.18041 314.18041 44058.904 44058.904 -2667.9134 -2667.9134 16000 -17470.453 -17470.453 -17633.401 -17633.401 315.23345 315.23345 44009.215 44009.215 -765.33394 -765.33394 Loop time of 62.9476 on 1 procs for 1000 steps with 4000 atoms Performance: 1.373 ns/day, 17.485 hours/ns, 15.886 timesteps/s 64.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 62.663 | 62.663 | 62.663 | 0.0 | 99.55 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.040562 | 0.040562 | 0.040562 | 0.0 | 0.06 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.2241 | 0.2241 | 0.2241 | 0.0 | 0.36 Other | | 0.02031 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157309 ave 157309 max 157309 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314618 ave 314618 max 314618 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314618 Ave neighs/atom = 78.6545 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.605702763059, Press = 6.83818022834843 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -17470.453 -17470.453 -17633.401 -17633.401 315.23345 315.23345 44009.215 44009.215 -765.33394 -765.33394 17000 -17477.929 -17477.929 -17638.219 -17638.219 310.0922 310.0922 43960.689 43960.689 995.15637 995.15637 Loop time of 63.3841 on 1 procs for 1000 steps with 4000 atoms Performance: 1.363 ns/day, 17.607 hours/ns, 15.777 timesteps/s 63.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.059 | 63.059 | 63.059 | 0.0 | 99.49 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.060091 | 0.060091 | 0.060091 | 0.0 | 0.09 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.245 | 0.245 | 0.245 | 0.0 | 0.39 Other | | 0.0203 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157420 ave 157420 max 157420 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314840 ave 314840 max 314840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314840 Ave neighs/atom = 78.71 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.472583978959, Press = 5.19742164894582 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -17477.929 -17477.929 -17638.219 -17638.219 310.0922 310.0922 43960.689 43960.689 995.15637 995.15637 18000 -17470.714 -17470.714 -17634.805 -17634.805 317.44575 317.44575 43957.468 43957.468 1196.6341 1196.6341 Loop time of 64.6621 on 1 procs for 1000 steps with 4000 atoms Performance: 1.336 ns/day, 17.962 hours/ns, 15.465 timesteps/s 62.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 64.319 | 64.319 | 64.319 | 0.0 | 99.47 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.060134 | 0.060134 | 0.060134 | 0.0 | 0.09 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.2628 | 0.2628 | 0.2628 | 0.0 | 0.41 Other | | 0.02008 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157431 ave 157431 max 157431 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314862 ave 314862 max 314862 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314862 Ave neighs/atom = 78.7155 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.400772752818, Press = 1.30717021499971 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -17470.714 -17470.714 -17634.805 -17634.805 317.44575 317.44575 43957.468 43957.468 1196.6341 1196.6341 19000 -17477.28 -17477.28 -17637.71 -17637.71 310.36424 310.36424 43970.762 43970.762 529.39247 529.39247 Loop time of 76.6659 on 1 procs for 1000 steps with 4000 atoms Performance: 1.127 ns/day, 21.296 hours/ns, 13.044 timesteps/s 52.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 76.212 | 76.212 | 76.212 | 0.0 | 99.41 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14057 | 0.14057 | 0.14057 | 0.0 | 0.18 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.26349 | 0.26349 | 0.26349 | 0.0 | 0.34 Other | | 0.04993 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157470 ave 157470 max 157470 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314940 ave 314940 max 314940 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314940 Ave neighs/atom = 78.735 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.238374393977, Press = -1.2066229068202 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -17477.28 -17477.28 -17637.71 -17637.71 310.36424 310.36424 43970.762 43970.762 529.39247 529.39247 20000 -17476.464 -17476.464 -17632.58 -17632.58 302.01782 302.01782 44013.276 44013.276 -1129.5059 -1129.5059 Loop time of 76.6287 on 1 procs for 1000 steps with 4000 atoms Performance: 1.128 ns/day, 21.286 hours/ns, 13.050 timesteps/s 53.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 76.224 | 76.224 | 76.224 | 0.0 | 99.47 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.060558 | 0.060558 | 0.060558 | 0.0 | 0.08 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.30416 | 0.30416 | 0.30416 | 0.0 | 0.40 Other | | 0.04026 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157435 ave 157435 max 157435 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314870 ave 314870 max 314870 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314870 Ave neighs/atom = 78.7175 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.189884190111, Press = -1.4293582579744 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -17476.464 -17476.464 -17632.58 -17632.58 302.01782 302.01782 44013.276 44013.276 -1129.5059 -1129.5059 21000 -17473.158 -17473.158 -17634.774 -17634.774 312.65712 312.65712 44050.274 44050.274 -2659.4034 -2659.4034 Loop time of 67.2226 on 1 procs for 1000 steps with 4000 atoms Performance: 1.285 ns/day, 18.673 hours/ns, 14.876 timesteps/s 60.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 66.861 | 66.861 | 66.861 | 0.0 | 99.46 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.03973 | 0.03973 | 0.03973 | 0.0 | 0.06 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.30151 | 0.30151 | 0.30151 | 0.0 | 0.45 Other | | 0.01998 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157413 ave 157413 max 157413 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314826 ave 314826 max 314826 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314826 Ave neighs/atom = 78.7065 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.318597304036, Press = 2.45386783727366 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -17473.158 -17473.158 -17634.774 -17634.774 312.65712 312.65712 44050.274 44050.274 -2659.4034 -2659.4034 22000 -17471.542 -17471.542 -17631.339 -17631.339 309.13727 309.13727 44009.395 44009.395 -787.31715 -787.31715 Loop time of 61.1827 on 1 procs for 1000 steps with 4000 atoms Performance: 1.412 ns/day, 16.995 hours/ns, 16.344 timesteps/s 66.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.78 | 60.78 | 60.78 | 0.0 | 99.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.039987 | 0.039987 | 0.039987 | 0.0 | 0.07 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.30237 | 0.30237 | 0.30237 | 0.0 | 0.49 Other | | 0.06011 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157354 ave 157354 max 157354 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314708 ave 314708 max 314708 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314708 Ave neighs/atom = 78.677 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.297817060959, Press = 7.81851103540166 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -17471.542 -17471.542 -17631.339 -17631.339 309.13727 309.13727 44009.395 44009.395 -787.31715 -787.31715 23000 -17475.327 -17475.327 -17637.089 -17637.089 312.93955 312.93955 43948.038 43948.038 1307.9564 1307.9564 Loop time of 56.4522 on 1 procs for 1000 steps with 4000 atoms Performance: 1.530 ns/day, 15.681 hours/ns, 17.714 timesteps/s 72.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 55.989 | 55.989 | 55.989 | 0.0 | 99.18 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10025 | 0.10025 | 0.10025 | 0.0 | 0.18 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.28301 | 0.28301 | 0.28301 | 0.0 | 0.50 Other | | 0.08028 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157453 ave 157453 max 157453 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314906 ave 314906 max 314906 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314906 Ave neighs/atom = 78.7265 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.253761485454, Press = 4.03335586494 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -17475.327 -17475.327 -17637.089 -17637.089 312.93955 312.93955 43948.038 43948.038 1307.9564 1307.9564 24000 -17476.075 -17476.075 -17635.059 -17635.059 307.56623 307.56623 43956.512 43956.512 1118.0789 1118.0789 Loop time of 57.5639 on 1 procs for 1000 steps with 4000 atoms Performance: 1.501 ns/day, 15.990 hours/ns, 17.372 timesteps/s 70.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 57.23 | 57.23 | 57.23 | 0.0 | 99.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.040603 | 0.040603 | 0.040603 | 0.0 | 0.07 Output | 2.718e-05 | 2.718e-05 | 2.718e-05 | 0.0 | 0.00 Modify | 0.26321 | 0.26321 | 0.26321 | 0.0 | 0.46 Other | | 0.03018 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157475 ave 157475 max 157475 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314950 ave 314950 max 314950 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314950 Ave neighs/atom = 78.7375 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.207111326281, Press = 1.49223628471288 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -17476.075 -17476.075 -17635.059 -17635.059 307.56623 307.56623 43956.512 43956.512 1118.0789 1118.0789 25000 -17470.175 -17470.175 -17632.266 -17632.266 313.57514 313.57514 43986.029 43986.029 122.39187 122.39187 Loop time of 57.7063 on 1 procs for 1000 steps with 4000 atoms Performance: 1.497 ns/day, 16.030 hours/ns, 17.329 timesteps/s 70.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 57.464 | 57.464 | 57.464 | 0.0 | 99.58 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.040257 | 0.040257 | 0.040257 | 0.0 | 0.07 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.18205 | 0.18205 | 0.18205 | 0.0 | 0.32 Other | | 0.0202 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157475 ave 157475 max 157475 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314950 ave 314950 max 314950 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314950 Ave neighs/atom = 78.7375 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.108751596632, Press = -0.418220792889968 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 15.05 | 15.05 | 15.05 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -17470.175 -17470.175 -17632.266 -17632.266 313.57514 313.57514 43986.029 43986.029 122.39187 122.39187 26000 -17470.003 -17470.003 -17633.159 -17633.159 315.6372 315.6372 44036.751 44036.751 -1690.895 -1690.895 Loop time of 53.9386 on 1 procs for 1000 steps with 4000 atoms Performance: 1.602 ns/day, 14.983 hours/ns, 18.540 timesteps/s 75.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 53.675 | 53.675 | 53.675 | 0.0 | 99.51 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.060589 | 0.060589 | 0.060589 | 0.0 | 0.11 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.18249 | 0.18249 | 0.18249 | 0.0 | 0.34 Other | | 0.02025 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 157451 ave 157451 max 157451 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 314902 ave 314902 max 314902 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 314902 Ave neighs/atom = 78.7255 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 43987.7141303204 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0