# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.519999980926514*${_u_distance} variable latticeconst_converted equal 3.519999980926514*1 lattice fcc ${latticeconst_converted} lattice fcc 3.51999998092651 Lattice spacing in x,y,z = 3.52 3.52 3.52 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (35.2 35.2 35.2) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000342131 secs variable mass_converted equal 58.6934*${_u_mass} variable mass_converted equal 58.6934*1 # specify which KIM Model to use pair_style adp pair_coeff * * ./SM_477692857359_000-files/b'Ni.adp' Ni Reading potential file ./SM_477692857359_000-files/b'Ni.adp' with DATE: 2011-06-20 mass 1 ${mass_converted} mass 1 58.6934 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 43614.2072910155 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 43614.2072910155/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 43614.2072910155/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 43614.2072910155/(1*1*${_u_distance}) variable V0_metal equal 43614.2072910155/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 43614.2072910155*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 43614.2072910155 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.168 ghost atom cutoff = 7.168 binsize = 3.584, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair adp, perpetual attributes: half, newton on pair build: half/bin/atomonly/newton stencil: half/bin/3d/newton bin: standard Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -17648.467 -17648.467 -17800 -17800 293.15 293.15 43614.207 43614.207 3710.9929 3710.9929 1000 -17485.154 -17485.154 -17641.429 -17641.429 302.32425 302.32425 43855.589 43855.589 2136.1209 2136.1209 Loop time of 39.2096 on 1 procs for 1000 steps with 4000 atoms Performance: 2.204 ns/day, 10.892 hours/ns, 25.504 timesteps/s 46.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.755 | 38.755 | 38.755 | 0.0 | 98.84 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.07387 | 0.07387 | 0.07387 | 0.0 | 0.19 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.31937 | 0.31937 | 0.31937 | 0.0 | 0.81 Other | | 0.06169 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 280000 ave 280000 max 280000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 280000 Ave neighs/atom = 70 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -17485.154 -17485.154 -17641.429 -17641.429 302.32425 302.32425 43855.589 43855.589 2136.1209 2136.1209 2000 -17496.519 -17496.519 -17644.447 -17644.447 286.17813 286.17813 43866.332 43866.332 1361.5819 1361.5819 Loop time of 42.0271 on 1 procs for 1000 steps with 4000 atoms Performance: 2.056 ns/day, 11.674 hours/ns, 23.794 timesteps/s 44.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.55 | 41.55 | 41.55 | 0.0 | 98.87 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11464 | 0.11464 | 0.11464 | 0.0 | 0.27 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.3002 | 0.3002 | 0.3002 | 0.0 | 0.71 Other | | 0.0618 | | | 0.15 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8096 ave 8096 max 8096 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278793 ave 278793 max 278793 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278793 Ave neighs/atom = 69.6983 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -17496.519 -17496.519 -17644.447 -17644.447 286.17813 286.17813 43866.332 43866.332 1361.5819 1361.5819 3000 -17493.478 -17493.478 -17647.688 -17647.688 298.32837 298.32837 43875.319 43875.319 1118.1467 1118.1467 Loop time of 41.7014 on 1 procs for 1000 steps with 4000 atoms Performance: 2.072 ns/day, 11.584 hours/ns, 23.980 timesteps/s 45.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.004 | 41.004 | 41.004 | 0.0 | 98.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13448 | 0.13448 | 0.13448 | 0.0 | 0.32 Output | 4.0054e-05 | 4.0054e-05 | 4.0054e-05 | 0.0 | 0.00 Modify | 0.48073 | 0.48073 | 0.48073 | 0.0 | 1.15 Other | | 0.08184 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8113 ave 8113 max 8113 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278832 ave 278832 max 278832 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278832 Ave neighs/atom = 69.708 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -17493.478 -17493.478 -17647.688 -17647.688 298.32837 298.32837 43875.319 43875.319 1118.1467 1118.1467 4000 -17491.929 -17491.929 -17645.906 -17645.906 297.87989 297.87989 43881.544 43881.544 1007.106 1007.106 Loop time of 39.7557 on 1 procs for 1000 steps with 4000 atoms Performance: 2.173 ns/day, 11.043 hours/ns, 25.154 timesteps/s 47.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.35 | 39.35 | 39.35 | 0.0 | 98.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11439 | 0.11439 | 0.11439 | 0.0 | 0.29 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.26918 | 0.26918 | 0.26918 | 0.0 | 0.68 Other | | 0.02192 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8089 ave 8089 max 8089 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278846 ave 278846 max 278846 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278846 Ave neighs/atom = 69.7115 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -17491.929 -17491.929 -17645.906 -17645.906 297.87989 297.87989 43881.544 43881.544 1007.106 1007.106 5000 -17496.324 -17496.324 -17647.818 -17647.818 293.07562 293.07562 43876.649 43876.649 1107.8049 1107.8049 Loop time of 41.6108 on 1 procs for 1000 steps with 4000 atoms Performance: 2.076 ns/day, 11.559 hours/ns, 24.032 timesteps/s 45.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.105 | 41.105 | 41.105 | 0.0 | 98.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15433 | 0.15433 | 0.15433 | 0.0 | 0.37 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.3098 | 0.3098 | 0.3098 | 0.0 | 0.74 Other | | 0.04172 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8106 ave 8106 max 8106 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278829 ave 278829 max 278829 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278829 Ave neighs/atom = 69.7073 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 291.061762973696, Press = -286.527306387327 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -17496.324 -17496.324 -17647.818 -17647.818 293.07562 293.07562 43876.649 43876.649 1107.8049 1107.8049 6000 -17491.785 -17491.785 -17643.109 -17643.109 292.74686 292.74686 43856.241 43856.241 2012.3495 2012.3495 Loop time of 42.3974 on 1 procs for 1000 steps with 4000 atoms Performance: 2.038 ns/day, 11.777 hours/ns, 23.586 timesteps/s 44.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.71 | 41.71 | 41.71 | 0.0 | 98.38 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.094689 | 0.094689 | 0.094689 | 0.0 | 0.22 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.53081 | 0.53081 | 0.53081 | 0.0 | 1.25 Other | | 0.0618 | | | 0.15 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8116 ave 8116 max 8116 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278756 ave 278756 max 278756 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278756 Ave neighs/atom = 69.689 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.604091493275, Press = -49.1971630356168 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -17491.785 -17491.785 -17643.109 -17643.109 292.74686 292.74686 43856.241 43856.241 2012.3495 2012.3495 7000 -17496.494 -17496.494 -17645.61 -17645.61 288.47645 288.47645 43843.842 43843.842 2376.9817 2376.9817 Loop time of 42.1099 on 1 procs for 1000 steps with 4000 atoms Performance: 2.052 ns/day, 11.697 hours/ns, 23.747 timesteps/s 45.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.711 | 41.711 | 41.711 | 0.0 | 99.05 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.073738 | 0.073738 | 0.073738 | 0.0 | 0.18 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.28332 | 0.28332 | 0.28332 | 0.0 | 0.67 Other | | 0.04155 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8087 ave 8087 max 8087 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278789 ave 278789 max 278789 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278789 Ave neighs/atom = 69.6972 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.933457595326, Press = -31.5812324707719 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -17496.494 -17496.494 -17645.61 -17645.61 288.47645 288.47645 43843.842 43843.842 2376.9817 2376.9817 8000 -17490.893 -17490.893 -17639.867 -17639.867 288.20044 288.20044 43881.82 43881.82 1127.3188 1127.3188 Loop time of 42.2569 on 1 procs for 1000 steps with 4000 atoms Performance: 2.045 ns/day, 11.738 hours/ns, 23.665 timesteps/s 45.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.614 | 41.614 | 41.614 | 0.0 | 98.48 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13505 | 0.13505 | 0.13505 | 0.0 | 0.32 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.46646 | 0.46646 | 0.46646 | 0.0 | 1.10 Other | | 0.04182 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8108 ave 8108 max 8108 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278817 ave 278817 max 278817 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278817 Ave neighs/atom = 69.7043 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.067433887813, Press = -12.5689476862691 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -17490.893 -17490.893 -17639.867 -17639.867 288.20044 288.20044 43881.82 43881.82 1127.3188 1127.3188 9000 -17493.807 -17493.807 -17645.638 -17645.638 293.72834 293.72834 43889.123 43889.123 619.13618 619.13618 Loop time of 41.5949 on 1 procs for 1000 steps with 4000 atoms Performance: 2.077 ns/day, 11.554 hours/ns, 24.041 timesteps/s 45.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.944 | 40.944 | 40.944 | 0.0 | 98.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.114 | 0.114 | 0.114 | 0.0 | 0.27 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.47499 | 0.47499 | 0.47499 | 0.0 | 1.14 Other | | 0.06186 | | | 0.15 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8075 ave 8075 max 8075 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278804 ave 278804 max 278804 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278804 Ave neighs/atom = 69.701 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.984483522842, Press = -8.56306032618227 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -17493.807 -17493.807 -17645.638 -17645.638 293.72834 293.72834 43889.123 43889.123 619.13618 619.13618 10000 -17491.932 -17491.932 -17644.504 -17644.504 295.16185 295.16185 43898.562 43898.562 404.06524 404.06524 Loop time of 41.8589 on 1 procs for 1000 steps with 4000 atoms Performance: 2.064 ns/day, 11.627 hours/ns, 23.890 timesteps/s 45.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.307 | 41.307 | 41.307 | 0.0 | 98.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13433 | 0.13433 | 0.13433 | 0.0 | 0.32 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.37558 | 0.37558 | 0.37558 | 0.0 | 0.90 Other | | 0.04199 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8113 ave 8113 max 8113 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278806 ave 278806 max 278806 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278806 Ave neighs/atom = 69.7015 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.170271135067, Press = -8.57829490388955 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -17491.932 -17491.932 -17644.504 -17644.504 295.16185 295.16185 43898.562 43898.562 404.06524 404.06524 11000 -17491.754 -17491.754 -17642.946 -17642.946 292.49102 292.49102 43902.451 43902.451 211.69253 211.69253 Loop time of 41.9099 on 1 procs for 1000 steps with 4000 atoms Performance: 2.062 ns/day, 11.642 hours/ns, 23.861 timesteps/s 45.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.268 | 41.268 | 41.268 | 0.0 | 98.47 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13431 | 0.13431 | 0.13431 | 0.0 | 0.32 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.48535 | 0.48535 | 0.48535 | 0.0 | 1.16 Other | | 0.02178 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8127 ave 8127 max 8127 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278827 ave 278827 max 278827 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278827 Ave neighs/atom = 69.7067 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.063628214744, Press = -4.97403598283349 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -17491.754 -17491.754 -17642.946 -17642.946 292.49102 292.49102 43902.451 43902.451 211.69253 211.69253 12000 -17494.258 -17494.258 -17645.244 -17645.244 292.09188 292.09188 43902.31 43902.31 67.046325 67.046325 Loop time of 40.1266 on 1 procs for 1000 steps with 4000 atoms Performance: 2.153 ns/day, 11.146 hours/ns, 24.921 timesteps/s 47.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.767 | 39.767 | 39.767 | 0.0 | 99.10 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.074056 | 0.074056 | 0.074056 | 0.0 | 0.18 Output | 6.1989e-05 | 6.1989e-05 | 6.1989e-05 | 0.0 | 0.00 Modify | 0.26402 | 0.26402 | 0.26402 | 0.0 | 0.66 Other | | 0.02163 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8078 ave 8078 max 8078 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278693 ave 278693 max 278693 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278693 Ave neighs/atom = 69.6732 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.234173564484, Press = -4.09015847732768 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -17494.258 -17494.258 -17645.244 -17645.244 292.09188 292.09188 43902.31 43902.31 67.046325 67.046325 13000 -17492.936 -17492.936 -17642.019 -17642.019 288.4119 288.4119 43914.78 43914.78 -296.60749 -296.60749 Loop time of 40.9672 on 1 procs for 1000 steps with 4000 atoms Performance: 2.109 ns/day, 11.380 hours/ns, 24.410 timesteps/s 45.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.556 | 40.556 | 40.556 | 0.0 | 99.00 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10502 | 0.10502 | 0.10502 | 0.0 | 0.26 Output | 2.718e-05 | 2.718e-05 | 2.718e-05 | 0.0 | 0.00 Modify | 0.26396 | 0.26396 | 0.26396 | 0.0 | 0.64 Other | | 0.04191 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8106 ave 8106 max 8106 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278746 ave 278746 max 278746 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278746 Ave neighs/atom = 69.6865 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.091866927356, Press = -4.12700360720261 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -17492.936 -17492.936 -17642.019 -17642.019 288.4119 288.4119 43914.78 43914.78 -296.60749 -296.60749 14000 -17497.402 -17497.402 -17645.409 -17645.409 286.33062 286.33062 43920.439 43920.439 -695.92597 -695.92597 Loop time of 38.6698 on 1 procs for 1000 steps with 4000 atoms Performance: 2.234 ns/day, 10.742 hours/ns, 25.860 timesteps/s 48.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.071 | 38.071 | 38.071 | 0.0 | 98.45 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25452 | 0.25452 | 0.25452 | 0.0 | 0.66 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.322 | 0.322 | 0.322 | 0.0 | 0.83 Other | | 0.0219 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8097 ave 8097 max 8097 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278745 ave 278745 max 278745 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278745 Ave neighs/atom = 69.6863 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.051783082364, Press = -5.95333742444259 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -17497.402 -17497.402 -17645.409 -17645.409 286.33062 286.33062 43920.439 43920.439 -695.92597 -695.92597 15000 -17495.158 -17495.158 -17645.357 -17645.357 290.57028 290.57028 43938.599 43938.599 -1376.9507 -1376.9507 Loop time of 41.4317 on 1 procs for 1000 steps with 4000 atoms Performance: 2.085 ns/day, 11.509 hours/ns, 24.136 timesteps/s 45.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.901 | 40.901 | 40.901 | 0.0 | 98.72 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11457 | 0.11457 | 0.11457 | 0.0 | 0.28 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.36458 | 0.36458 | 0.36458 | 0.0 | 0.88 Other | | 0.05192 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8130 ave 8130 max 8130 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278699 ave 278699 max 278699 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278699 Ave neighs/atom = 69.6748 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.979764667921, Press = -6.09347762143237 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -17495.158 -17495.158 -17645.357 -17645.357 290.57028 290.57028 43938.599 43938.599 -1376.9507 -1376.9507 16000 -17493.758 -17493.758 -17645.741 -17645.741 294.02185 294.02185 43945.423 43945.423 -1551.9225 -1551.9225 Loop time of 39.3536 on 1 procs for 1000 steps with 4000 atoms Performance: 2.195 ns/day, 10.932 hours/ns, 25.411 timesteps/s 48.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.024 | 39.024 | 39.024 | 0.0 | 99.16 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.08416 | 0.08416 | 0.08416 | 0.0 | 0.21 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.18418 | 0.18418 | 0.18418 | 0.0 | 0.47 Other | | 0.06174 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8063 ave 8063 max 8063 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278674 ave 278674 max 278674 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278674 Ave neighs/atom = 69.6685 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.861818398699, Press = -5.61925286438441 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -17493.758 -17493.758 -17645.741 -17645.741 294.02185 294.02185 43945.423 43945.423 -1551.9225 -1551.9225 17000 -17494.369 -17494.369 -17644.536 -17644.536 290.50743 290.50743 43953.644 43953.644 -1896.8227 -1896.8227 Loop time of 38.0089 on 1 procs for 1000 steps with 4000 atoms Performance: 2.273 ns/day, 10.558 hours/ns, 26.310 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.588 | 37.588 | 37.588 | 0.0 | 98.89 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.093999 | 0.093999 | 0.093999 | 0.0 | 0.25 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.3054 | 0.3054 | 0.3054 | 0.0 | 0.80 Other | | 0.02167 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8073 ave 8073 max 8073 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278695 ave 278695 max 278695 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278695 Ave neighs/atom = 69.6737 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.865316960818, Press = -4.38434805736427 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -17494.369 -17494.369 -17644.536 -17644.536 290.50743 290.50743 43953.644 43953.644 -1896.8227 -1896.8227 18000 -17495.055 -17495.055 -17642.085 -17642.085 284.43997 284.43997 43925.957 43925.957 -777.35889 -777.35889 Loop time of 37.6276 on 1 procs for 1000 steps with 4000 atoms Performance: 2.296 ns/day, 10.452 hours/ns, 26.576 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.007 | 37.007 | 37.007 | 0.0 | 98.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1537 | 0.1537 | 0.1537 | 0.0 | 0.41 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.38474 | 0.38474 | 0.38474 | 0.0 | 1.02 Other | | 0.08182 | | | 0.22 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8070 ave 8070 max 8070 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278696 ave 278696 max 278696 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278696 Ave neighs/atom = 69.674 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.723491036856, Press = -2.55475553915255 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -17495.055 -17495.055 -17642.085 -17642.085 284.43997 284.43997 43925.957 43925.957 -777.35889 -777.35889 19000 -17492.34 -17492.34 -17643.143 -17643.143 291.73967 291.73967 43913.275 43913.275 -146.45902 -146.45902 Loop time of 37.9033 on 1 procs for 1000 steps with 4000 atoms Performance: 2.279 ns/day, 10.529 hours/ns, 26.383 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.282 | 37.282 | 37.282 | 0.0 | 98.36 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13497 | 0.13497 | 0.13497 | 0.0 | 0.36 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.42433 | 0.42433 | 0.42433 | 0.0 | 1.12 Other | | 0.06172 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8093 ave 8093 max 8093 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278649 ave 278649 max 278649 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278649 Ave neighs/atom = 69.6623 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.888336252186, Press = -2.19935568913094 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -17492.34 -17492.34 -17643.143 -17643.143 291.73967 291.73967 43913.275 43913.275 -146.45902 -146.45902 20000 -17492.074 -17492.074 -17646.134 -17646.134 298.03956 298.03956 43914.917 43914.917 -391.87103 -391.87103 Loop time of 37.9402 on 1 procs for 1000 steps with 4000 atoms Performance: 2.277 ns/day, 10.539 hours/ns, 26.357 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.46 | 37.46 | 37.46 | 0.0 | 98.73 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.074044 | 0.074044 | 0.074044 | 0.0 | 0.20 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.36479 | 0.36479 | 0.36479 | 0.0 | 0.96 Other | | 0.04184 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8115 ave 8115 max 8115 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278750 ave 278750 max 278750 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278750 Ave neighs/atom = 69.6875 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.939654201827, Press = -1.40979430510695 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -17492.074 -17492.074 -17646.134 -17646.134 298.03956 298.03956 43914.917 43914.917 -391.87103 -391.87103 21000 -17492.991 -17492.991 -17647.673 -17647.673 299.24206 299.24206 43923 43923 -840.65549 -840.65549 Loop time of 38.7411 on 1 procs for 1000 steps with 4000 atoms Performance: 2.230 ns/day, 10.761 hours/ns, 25.812 timesteps/s 48.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.271 | 38.271 | 38.271 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13555 | 0.13555 | 0.13555 | 0.0 | 0.35 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.27342 | 0.27342 | 0.27342 | 0.0 | 0.71 Other | | 0.06156 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8100 ave 8100 max 8100 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278714 ave 278714 max 278714 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278714 Ave neighs/atom = 69.6785 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.075674857114, Press = -0.680212430972848 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -17492.991 -17492.991 -17647.673 -17647.673 299.24206 299.24206 43923 43923 -840.65549 -840.65549 22000 -17493.698 -17493.698 -17645.238 -17645.238 293.16518 293.16518 43941.378 43941.378 -1544.3656 -1544.3656 Loop time of 43.1966 on 1 procs for 1000 steps with 4000 atoms Performance: 2.000 ns/day, 11.999 hours/ns, 23.150 timesteps/s 43.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.565 | 42.565 | 42.565 | 0.0 | 98.54 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17405 | 0.17405 | 0.17405 | 0.0 | 0.40 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.39537 | 0.39537 | 0.39537 | 0.0 | 0.92 Other | | 0.06194 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8089 ave 8089 max 8089 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278684 ave 278684 max 278684 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278684 Ave neighs/atom = 69.671 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.074928411684, Press = 0.450262229673846 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -17493.698 -17493.698 -17645.238 -17645.238 293.16518 293.16518 43941.378 43941.378 -1544.3656 -1544.3656 23000 -17497.718 -17497.718 -17646.719 -17646.719 288.2535 288.2535 43938.111 43938.111 -1511.1574 -1511.1574 Loop time of 42.6456 on 1 procs for 1000 steps with 4000 atoms Performance: 2.026 ns/day, 11.846 hours/ns, 23.449 timesteps/s 44.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.168 | 42.168 | 42.168 | 0.0 | 98.88 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14336 | 0.14336 | 0.14336 | 0.0 | 0.34 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.29299 | 0.29299 | 0.29299 | 0.0 | 0.69 Other | | 0.04136 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8090 ave 8090 max 8090 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278672 ave 278672 max 278672 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278672 Ave neighs/atom = 69.668 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.035541271975, Press = 1.2188874335422 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -17497.718 -17497.718 -17646.719 -17646.719 288.2535 288.2535 43938.111 43938.111 -1511.1574 -1511.1574 24000 -17493.183 -17493.183 -17644.734 -17644.734 293.18585 293.18585 43927.345 43927.345 -906.3261 -906.3261 Loop time of 43.9347 on 1 procs for 1000 steps with 4000 atoms Performance: 1.967 ns/day, 12.204 hours/ns, 22.761 timesteps/s 42.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.356 | 43.356 | 43.356 | 0.0 | 98.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.093437 | 0.093437 | 0.093437 | 0.0 | 0.21 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.40372 | 0.40372 | 0.40372 | 0.0 | 0.92 Other | | 0.08166 | | | 0.19 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8090 ave 8090 max 8090 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278698 ave 278698 max 278698 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278698 Ave neighs/atom = 69.6745 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.979259919832, Press = 0.958034474792205 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.028 | 7.028 | 7.028 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -17493.183 -17493.183 -17644.734 -17644.734 293.18585 293.18585 43927.345 43927.345 -906.3261 -906.3261 25000 -17495.168 -17495.168 -17649.589 -17649.589 298.73701 298.73701 43910.368 43910.368 -409.10872 -409.10872 Loop time of 43.1897 on 1 procs for 1000 steps with 4000 atoms Performance: 2.000 ns/day, 11.997 hours/ns, 23.154 timesteps/s 43.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.598 | 42.598 | 42.598 | 0.0 | 98.63 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11393 | 0.11393 | 0.11393 | 0.0 | 0.26 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.41616 | 0.41616 | 0.41616 | 0.0 | 0.96 Other | | 0.06189 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8059 ave 8059 max 8059 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 278651 ave 278651 max 278651 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 278651 Ave neighs/atom = 69.6628 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 43904.506144134 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0