-------------------------------------------------------------------------- By default, for Open MPI 4.0 and later, infiniband ports on a device are not used by default. The intent is to use UCX for these devices. You can override this policy by setting the btl_openib_allow_ib MCA parameter to true. Local host: c401-032 Local adapter: hfi1_0 Local port: 1 -------------------------------------------------------------------------- -------------------------------------------------------------------------- WARNING: There was an error initializing an OpenFabrics device. Local host: c401-032 Local device: hfi1_0 -------------------------------------------------------------------------- -------------------------------------------------------------------------- By default, for Open MPI 4.0 and later, infiniband ports on a device are not used by default. The intent is to use UCX for these devices. You can override this policy by setting the btl_openib_allow_ib MCA parameter to true. Local host: c401-032 Local adapter: hfi1_0 Local port: 1 -------------------------------------------------------------------------- -------------------------------------------------------------------------- WARNING: There was an error initializing an OpenFabrics device. Local host: c401-032 Local device: hfi1_0 -------------------------------------------------------------------------- Failed to allocate 8067052224 bytes for array list:three_bodiesterminate called after throwing an instance of 'LAMMPS_NS::LAMMPSAbortException' what(): ERROR on proc 0: Trying to free the already free()'d pointer: list:three_bodies (src/REAXFF/reaxff_tool_box.cpp:104) Last command: clear # Clear existing atoms, variables, and allocated memory [c401-032:120303] *** Process received signal *** [c401-032:120303] Signal: Aborted (6) [c401-032:120303] Signal code: (-6) [c401-032:120303] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x2acad9588090] [c401-032:120303] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x2acad958800b] [c401-032:120303] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x2acad9567859] [c401-032:120303] [ 3] /lib/x86_64-linux-gnu/libstdc++.so.6(+0x9e911)[0x2acad93e6911] [c401-032:120303] [ 4] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xaa38c)[0x2acad93f238c] [c401-032:120303] [ 5] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa9369)[0x2acad93f1369] [c401-032:120303] [ 6] /lib/x86_64-linux-gnu/libstdc++.so.6(__gxx_personality_v0+0x2a1)[0x2acad93f1d21] [c401-032:120303] [ 7] /lib/x86_64-linux-gnu/libgcc_s.so.1(+0x10bef)[0x2acad953abef] [c401-032:120303] [ 8] /lib/x86_64-linux-gnu/libgcc_s.so.1(_Unwind_Resume+0x12a)[0x2acad953b5aa] [c401-032:120303] [ 9] /usr/local/lib/liblammps.so.0(+0x1e3bce)[0x2acad89f1bce] [c401-032:120303] [10] /usr/local/lib/liblammps.so.0(_ZN9LAMMPS_NS10PairReaxFFD1Ev+0x13b)[0x2acad909325b] [c401-032:120303] [11] /usr/local/lib/liblammps.so.0(_ZN9LAMMPS_NS10PairReaxFFD0Ev+0xd)[0x2acad909356d] [c401-032:120303] [12] /usr/local/lib/liblammps.so.0(_ZN9LAMMPS_NS5ForceD1Ev+0xa8)[0x2acad8bf98f8] [c401-032:120303] [13] /usr/local/lib/liblammps.so.0(_ZN9LAMMPS_NS5ForceD0Ev+0xd)[0x2acad8bf9bfd] [c401-032:120303] [14] /usr/local/lib/liblammps.so.0(_ZN9LAMMPS_NS6LAMMPS7destroyEv+0x45)[0x2acad8c46e75] [c401-032:120303] [15] /usr/local/lib/liblammps.so.0(_ZN9LAMMPS_NS5Input5clearEv+0x32)[0x2acad8c339e2] [c401-032:120303] [16] /usr/local/lib/liblammps.so.0(_ZN9LAMMPS_NS5Input15execute_commandEv+0x9e0)[0x2acad8c3cee0] [c401-032:120303] [17] /usr/local/lib/liblammps.so.0(_ZN9LAMMPS_NS5Input4fileEv+0x17e)[0x2acad8c3d54e] [c401-032:120303] [18] lammps(+0x136e)[0x55751b90436e] [c401-032:120303] [19] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x2acad9569083] [c401-032:120303] [20] lammps(+0x13ee)[0x55751b9043ee] [c401-032:120303] *** End of error message *** ../../td/CohesiveEnergyVsLatticeConstant__TD_554653289799_003/runner: line 234: 120303 Aborted lammps -in output/lammps.in > output/lammps.log {"realtime":21.30,"usertime":11.91,"systime":4.10,"memmax":394480,"memavg":0}