# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.056164935231209*${_u_distance} variable latticeconst_converted equal 4.056164935231209*1 lattice fcc ${latticeconst_converted} lattice fcc 4.05616493523121 Lattice spacing in x,y,z = 4.05616 4.05616 4.05616 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (40.5616 40.5616 40.5616) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000496864 secs variable mass_converted equal 196.96655*${_u_mass} variable mass_converted equal 196.96655*1 # specify which KIM Model to use pair_style kim EMT_Asap_Standard_JacobsenStoltzeNorskov_1996_Au__MO_017524376569_001 pair_coeff * * Au mass 1 ${mass_converted} mass 1 196.96655 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 66733.9480627777 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 66733.9480627777/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 66733.9480627777/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 66733.9480627777/(1*1*${_u_distance}) variable V0_metal equal 66733.9480627777/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 66733.9480627777*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 66733.9480627777 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 333.15*${_u_temperature} variable temp_converted equal 333.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 333.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "333.15 - 0.2" variable T_up equal "333.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.6001 ghost atom cutoff = 7.6001 binsize = 3.80005, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.6001 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -15028.331 -15028.331 -15200.54 -15200.54 333.15 333.15 66733.948 66733.948 2756.3264 2756.3264 1000 -14828.604 -14828.604 -15009.054 -15009.054 349.09405 349.09405 68264.517 68264.517 237.37743 237.37743 Loop time of 51.4463 on 1 procs for 1000 steps with 4000 atoms Performance: 1.679 ns/day, 14.291 hours/ns, 19.438 timesteps/s 49.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 51.018 | 51.018 | 51.018 | 0.0 | 99.17 Neigh | 0.01474 | 0.01474 | 0.01474 | 0.0 | 0.03 Comm | 0.048118 | 0.048118 | 0.048118 | 0.0 | 0.09 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.34423 | 0.34423 | 0.34423 | 0.0 | 0.67 Other | | 0.02166 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 412820 ave 412820 max 412820 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 412820 Ave neighs/atom = 103.205 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -14828.604 -14828.604 -15009.054 -15009.054 349.09405 349.09405 68264.517 68264.517 237.37743 237.37743 2000 -14848.663 -14848.663 -15020.393 -15020.393 332.22383 332.22383 68153.867 68153.867 837.08047 837.08047 Loop time of 54.7708 on 1 procs for 1000 steps with 4000 atoms Performance: 1.577 ns/day, 15.214 hours/ns, 18.258 timesteps/s 49.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 54.433 | 54.433 | 54.433 | 0.0 | 99.38 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.05423 | 0.05423 | 0.05423 | 0.0 | 0.10 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.24456 | 0.24456 | 0.24456 | 0.0 | 0.45 Other | | 0.03939 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 415882 ave 415882 max 415882 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 415882 Ave neighs/atom = 103.971 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -14848.663 -14848.663 -15020.393 -15020.393 332.22383 332.22383 68153.867 68153.867 837.08047 837.08047 3000 -14852.342 -14852.342 -15022.35 -15022.35 328.89211 328.89211 68208.48 68208.48 -890.67419 -890.67419 Loop time of 54.4669 on 1 procs for 1000 steps with 4000 atoms Performance: 1.586 ns/day, 15.130 hours/ns, 18.360 timesteps/s 49.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 54.095 | 54.095 | 54.095 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058588 | 0.058588 | 0.058588 | 0.0 | 0.11 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.2941 | 0.2941 | 0.2941 | 0.0 | 0.54 Other | | 0.01913 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 416602 ave 416602 max 416602 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 416602 Ave neighs/atom = 104.15 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -14852.342 -14852.342 -15022.35 -15022.35 328.89211 328.89211 68208.48 68208.48 -890.67419 -890.67419 4000 -14845.872 -14845.872 -15021.871 -15021.871 340.48265 340.48265 68133.191 68133.191 1183.747 1183.747 Loop time of 54.6096 on 1 procs for 1000 steps with 4000 atoms Performance: 1.582 ns/day, 15.169 hours/ns, 18.312 timesteps/s 49.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 54.124 | 54.124 | 54.124 | 0.0 | 99.11 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.078693 | 0.078693 | 0.078693 | 0.0 | 0.14 Output | 4.1008e-05 | 4.1008e-05 | 4.1008e-05 | 0.0 | 0.00 Modify | 0.36763 | 0.36763 | 0.36763 | 0.0 | 0.67 Other | | 0.03957 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 415254 ave 415254 max 415254 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 415254 Ave neighs/atom = 103.814 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -14845.872 -14845.872 -15021.871 -15021.871 340.48265 340.48265 68133.191 68133.191 1183.747 1183.747 5000 -14846.183 -14846.183 -15018.746 -15018.746 333.83574 333.83574 68154.661 68154.661 1269.4317 1269.4317 Loop time of 54.6567 on 1 procs for 1000 steps with 4000 atoms Performance: 1.581 ns/day, 15.182 hours/ns, 18.296 timesteps/s 49.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 54.275 | 54.275 | 54.275 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.076675 | 0.076675 | 0.076675 | 0.0 | 0.14 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.26515 | 0.26515 | 0.26515 | 0.0 | 0.49 Other | | 0.03956 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 417134 ave 417134 max 417134 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 417134 Ave neighs/atom = 104.284 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 334.910825798366, Press = -293.426167637754 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -14846.183 -14846.183 -15018.746 -15018.746 333.83574 333.83574 68154.661 68154.661 1269.4317 1269.4317 6000 -14853.864 -14853.864 -15023.129 -15023.129 327.45359 327.45359 68127.254 68127.254 1027.2144 1027.2144 Loop time of 54.6063 on 1 procs for 1000 steps with 4000 atoms Performance: 1.582 ns/day, 15.168 hours/ns, 18.313 timesteps/s 49.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 54.037 | 54.037 | 54.037 | 0.0 | 98.96 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1493 | 0.1493 | 0.1493 | 0.0 | 0.27 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.38083 | 0.38083 | 0.38083 | 0.0 | 0.70 Other | | 0.03937 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 416338 ave 416338 max 416338 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 416338 Ave neighs/atom = 104.085 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.94847357302, Press = 6.74205783960106 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -14853.864 -14853.864 -15023.129 -15023.129 327.45359 327.45359 68127.254 68127.254 1027.2144 1027.2144 7000 -14845.234 -14845.234 -15017.916 -15017.916 334.06511 334.06511 68183.359 68183.359 529.56377 529.56377 Loop time of 54.207 on 1 procs for 1000 steps with 4000 atoms Performance: 1.594 ns/day, 15.057 hours/ns, 18.448 timesteps/s 49.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 53.719 | 53.719 | 53.719 | 0.0 | 99.10 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11852 | 0.11852 | 0.11852 | 0.0 | 0.22 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.28925 | 0.28925 | 0.28925 | 0.0 | 0.53 Other | | 0.07973 | | | 0.15 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 417094 ave 417094 max 417094 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 417094 Ave neighs/atom = 104.273 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.168384610527, Press = -14.3252202432126 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -14845.234 -14845.234 -15017.916 -15017.916 334.06511 334.06511 68183.359 68183.359 529.56377 529.56377 8000 -14852.064 -14852.064 -15025.144 -15025.144 334.83554 334.83554 68124.628 68124.628 641.12461 641.12461 Loop time of 43.183 on 1 procs for 1000 steps with 4000 atoms Performance: 2.001 ns/day, 11.995 hours/ns, 23.157 timesteps/s 62.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.833 | 42.833 | 42.833 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11731 | 0.11731 | 0.11731 | 0.0 | 0.27 Output | 3.0994e-05 | 3.0994e-05 | 3.0994e-05 | 0.0 | 0.00 Modify | 0.21307 | 0.21307 | 0.21307 | 0.0 | 0.49 Other | | 0.01917 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 415944 ave 415944 max 415944 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 415944 Ave neighs/atom = 103.986 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.237288831264, Press = -10.7636939115719 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -14852.064 -14852.064 -15025.144 -15025.144 334.83554 334.83554 68124.628 68124.628 641.12461 641.12461 9000 -14843.976 -14843.976 -15019.692 -15019.692 339.93526 339.93526 68180.606 68180.606 366.04279 366.04279 Loop time of 50.885 on 1 procs for 1000 steps with 4000 atoms Performance: 1.698 ns/day, 14.135 hours/ns, 19.652 timesteps/s 53.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 50.529 | 50.529 | 50.529 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038837 | 0.038837 | 0.038837 | 0.0 | 0.08 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.27783 | 0.27783 | 0.27783 | 0.0 | 0.55 Other | | 0.03925 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 416880 ave 416880 max 416880 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 416880 Ave neighs/atom = 104.22 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.166439912895, Press = -19.7503718127462 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -14843.976 -14843.976 -15019.692 -15019.692 339.93526 339.93526 68180.606 68180.606 366.04279 366.04279 10000 -14849.805 -14849.805 -15023.417 -15023.417 335.86522 335.86522 68099.419 68099.419 1660.3442 1660.3442 Loop time of 45.7125 on 1 procs for 1000 steps with 4000 atoms Performance: 1.890 ns/day, 12.698 hours/ns, 21.876 timesteps/s 59.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 45.316 | 45.316 | 45.316 | 0.0 | 99.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058811 | 0.058811 | 0.058811 | 0.0 | 0.13 Output | 8.6069e-05 | 8.6069e-05 | 8.6069e-05 | 0.0 | 0.00 Modify | 0.3184 | 0.3184 | 0.3184 | 0.0 | 0.70 Other | | 0.01955 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 416040 ave 416040 max 416040 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 416040 Ave neighs/atom = 104.01 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.520712599403, Press = -9.18953241306194 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -14849.805 -14849.805 -15023.417 -15023.417 335.86522 335.86522 68099.419 68099.419 1660.3442 1660.3442 11000 -14845.329 -14845.329 -15018.745 -15018.745 335.48439 335.48439 68252.573 68252.573 -1212.2224 -1212.2224 Loop time of 47.9016 on 1 procs for 1000 steps with 4000 atoms Performance: 1.804 ns/day, 13.306 hours/ns, 20.876 timesteps/s 56.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.402 | 47.402 | 47.402 | 0.0 | 98.96 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.078192 | 0.078192 | 0.078192 | 0.0 | 0.16 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.4022 | 0.4022 | 0.4022 | 0.0 | 0.84 Other | | 0.01915 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 417044 ave 417044 max 417044 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 417044 Ave neighs/atom = 104.261 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.28162864695, Press = -13.1252267928578 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -14845.329 -14845.329 -15018.745 -15018.745 335.48439 335.48439 68252.573 68252.573 -1212.2224 -1212.2224 12000 -14847.448 -14847.448 -15019.34 -15019.34 332.53815 332.53815 68227.196 68227.196 -726.89713 -726.89713 Loop time of 47.9856 on 1 procs for 1000 steps with 4000 atoms Performance: 1.801 ns/day, 13.329 hours/ns, 20.840 timesteps/s 55.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.631 | 47.631 | 47.631 | 0.0 | 99.26 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038419 | 0.038419 | 0.038419 | 0.0 | 0.08 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.29676 | 0.29676 | 0.29676 | 0.0 | 0.62 Other | | 0.01901 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 414986 ave 414986 max 414986 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 414986 Ave neighs/atom = 103.746 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.136387255199, Press = -5.89522743637901 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -14847.448 -14847.448 -15019.34 -15019.34 332.53815 332.53815 68227.196 68227.196 -726.89713 -726.89713 13000 -14847.118 -14847.118 -15020.019 -15020.019 334.48921 334.48921 68229.304 68229.304 -838.44871 -838.44871 Loop time of 44.4649 on 1 procs for 1000 steps with 4000 atoms Performance: 1.943 ns/day, 12.351 hours/ns, 22.490 timesteps/s 60.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.087 | 44.087 | 44.087 | 0.0 | 99.15 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058479 | 0.058479 | 0.058479 | 0.0 | 0.13 Output | 2.5034e-05 | 2.5034e-05 | 2.5034e-05 | 0.0 | 0.00 Modify | 0.27993 | 0.27993 | 0.27993 | 0.0 | 0.63 Other | | 0.03909 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 415000 ave 415000 max 415000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 415000 Ave neighs/atom = 103.75 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.155083631579, Press = -6.25993797525335 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -14847.118 -14847.118 -15020.019 -15020.019 334.48921 334.48921 68229.304 68229.304 -838.44871 -838.44871 14000 -14850.744 -14850.744 -15022.153 -15022.153 331.60318 331.60318 68123.113 68123.113 1227.3513 1227.3513 Loop time of 47.9705 on 1 procs for 1000 steps with 4000 atoms Performance: 1.801 ns/day, 13.325 hours/ns, 20.846 timesteps/s 56.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.655 | 47.655 | 47.655 | 0.0 | 99.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038353 | 0.038353 | 0.038353 | 0.0 | 0.08 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.23836 | 0.23836 | 0.23836 | 0.0 | 0.50 Other | | 0.03916 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 415336 ave 415336 max 415336 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 415336 Ave neighs/atom = 103.834 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.969489346308, Press = -3.43257594200615 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -14850.744 -14850.744 -15022.153 -15022.153 331.60318 331.60318 68123.113 68123.113 1227.3513 1227.3513 15000 -14846.997 -14846.997 -15018.96 -15018.96 332.6744 332.6744 68234.14 68234.14 -795.58673 -795.58673 Loop time of 43.0221 on 1 procs for 1000 steps with 4000 atoms Performance: 2.008 ns/day, 11.951 hours/ns, 23.244 timesteps/s 62.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.726 | 42.726 | 42.726 | 0.0 | 99.31 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038367 | 0.038367 | 0.038367 | 0.0 | 0.09 Output | 3.0994e-05 | 3.0994e-05 | 3.0994e-05 | 0.0 | 0.00 Modify | 0.23869 | 0.23869 | 0.23869 | 0.0 | 0.55 Other | | 0.01915 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 417272 ave 417272 max 417272 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 417272 Ave neighs/atom = 104.318 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.93289539945, Press = -5.57680983426526 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -14846.997 -14846.997 -15018.96 -15018.96 332.6744 332.6744 68234.14 68234.14 -795.58673 -795.58673 16000 -14843.211 -14843.211 -15018.774 -15018.774 339.63688 339.63688 68228.082 68228.082 -608.4316 -608.4316 Loop time of 46.829 on 1 procs for 1000 steps with 4000 atoms Performance: 1.845 ns/day, 13.008 hours/ns, 21.354 timesteps/s 58.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.462 | 46.462 | 46.462 | 0.0 | 99.22 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079193 | 0.079193 | 0.079193 | 0.0 | 0.17 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.26838 | 0.26838 | 0.26838 | 0.0 | 0.57 Other | | 0.01941 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 415212 ave 415212 max 415212 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 415212 Ave neighs/atom = 103.803 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.004452987565, Press = -3.87457375447805 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -14843.211 -14843.211 -15018.774 -15018.774 339.63688 339.63688 68228.082 68228.082 -608.4316 -608.4316 17000 -14843.949 -14843.949 -15022.115 -15022.115 344.67285 344.67285 68234.011 68234.011 -1250.1048 -1250.1048 Loop time of 44.9061 on 1 procs for 1000 steps with 4000 atoms Performance: 1.924 ns/day, 12.474 hours/ns, 22.269 timesteps/s 60.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.529 | 44.529 | 44.529 | 0.0 | 99.16 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058642 | 0.058642 | 0.058642 | 0.0 | 0.13 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.27923 | 0.27923 | 0.27923 | 0.0 | 0.62 Other | | 0.03919 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 415252 ave 415252 max 415252 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 415252 Ave neighs/atom = 103.813 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.175420918217, Press = -3.39088539773958 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -14843.949 -14843.949 -15022.115 -15022.115 344.67285 344.67285 68234.011 68234.011 -1250.1048 -1250.1048 18000 -14849.868 -14849.868 -15019.529 -15019.529 328.22093 328.22093 68191.174 68191.174 168.70597 168.70597 Loop time of 47.2153 on 1 procs for 1000 steps with 4000 atoms Performance: 1.830 ns/day, 13.115 hours/ns, 21.180 timesteps/s 56.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.86 | 46.86 | 46.86 | 0.0 | 99.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058878 | 0.058878 | 0.058878 | 0.0 | 0.12 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.25747 | 0.25747 | 0.25747 | 0.0 | 0.55 Other | | 0.03908 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 415066 ave 415066 max 415066 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 415066 Ave neighs/atom = 103.766 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.163037286109, Press = -1.68978808148673 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -14849.868 -14849.868 -15019.529 -15019.529 328.22093 328.22093 68191.174 68191.174 168.70597 168.70597 19000 -14843.872 -14843.872 -15019.955 -15019.955 340.64383 340.64383 68170.083 68170.083 601.8703 601.8703 Loop time of 48.1048 on 1 procs for 1000 steps with 4000 atoms Performance: 1.796 ns/day, 13.362 hours/ns, 20.788 timesteps/s 56.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.738 | 47.738 | 47.738 | 0.0 | 99.24 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.039649 | 0.039649 | 0.039649 | 0.0 | 0.08 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.288 | 0.288 | 0.288 | 0.0 | 0.60 Other | | 0.03926 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 416032 ave 416032 max 416032 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 416032 Ave neighs/atom = 104.008 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.240921264864, Press = -2.66523348663564 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -14843.872 -14843.872 -15019.955 -15019.955 340.64383 340.64383 68170.083 68170.083 601.8703 601.8703 20000 -14844.065 -14844.065 -15017.155 -15017.155 334.85375 334.85375 68198.338 68198.338 355.52046 355.52046 Loop time of 40.6311 on 1 procs for 1000 steps with 4000 atoms Performance: 2.126 ns/day, 11.286 hours/ns, 24.612 timesteps/s 66.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.296 | 40.296 | 40.296 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.088636 | 0.088636 | 0.088636 | 0.0 | 0.22 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.22765 | 0.22765 | 0.22765 | 0.0 | 0.56 Other | | 0.01928 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 416186 ave 416186 max 416186 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 416186 Ave neighs/atom = 104.046 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.24740706105, Press = -5.52927263168183 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -14844.065 -14844.065 -15017.155 -15017.155 334.85375 334.85375 68198.338 68198.338 355.52046 355.52046 21000 -14845.649 -14845.649 -15019.548 -15019.548 336.41809 336.41809 68264.645 68264.645 -1623.8278 -1623.8278 Loop time of 41.6171 on 1 procs for 1000 steps with 4000 atoms Performance: 2.076 ns/day, 11.560 hours/ns, 24.029 timesteps/s 64.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.281 | 41.281 | 41.281 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.03863 | 0.03863 | 0.03863 | 0.0 | 0.09 Output | 4.7207e-05 | 4.7207e-05 | 4.7207e-05 | 0.0 | 0.00 Modify | 0.23787 | 0.23787 | 0.23787 | 0.0 | 0.57 Other | | 0.05931 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 415938 ave 415938 max 415938 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 415938 Ave neighs/atom = 103.984 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.286403617544, Press = -2.77741254310962 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -14845.649 -14845.649 -15019.548 -15019.548 336.41809 336.41809 68264.645 68264.645 -1623.8278 -1623.8278 22000 -14843.328 -14843.328 -15019.165 -15019.165 340.16842 340.16842 68226.764 68226.764 -596.19201 -596.19201 Loop time of 39.6725 on 1 procs for 1000 steps with 4000 atoms Performance: 2.178 ns/day, 11.020 hours/ns, 25.206 timesteps/s 68.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.296 | 39.296 | 39.296 | 0.0 | 99.05 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.078767 | 0.078767 | 0.078767 | 0.0 | 0.20 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.278 | 0.278 | 0.278 | 0.0 | 0.70 Other | | 0.01937 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 414502 ave 414502 max 414502 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 414502 Ave neighs/atom = 103.626 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.26871403437, Press = -3.26679434851485 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -14843.328 -14843.328 -15019.165 -15019.165 340.16842 340.16842 68226.764 68226.764 -596.19201 -596.19201 23000 -14851.565 -14851.565 -15022.468 -15022.468 330.62174 330.62174 68189.631 68189.631 -394.91687 -394.91687 Loop time of 40.5691 on 1 procs for 1000 steps with 4000 atoms Performance: 2.130 ns/day, 11.269 hours/ns, 24.649 timesteps/s 66.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.262 | 40.262 | 40.262 | 0.0 | 99.24 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038815 | 0.038815 | 0.038815 | 0.0 | 0.10 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.22869 | 0.22869 | 0.22869 | 0.0 | 0.56 Other | | 0.03936 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 415758 ave 415758 max 415758 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 415758 Ave neighs/atom = 103.939 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.369889603984, Press = -2.67359817651761 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -14851.565 -14851.565 -15022.468 -15022.468 330.62174 330.62174 68189.631 68189.631 -394.91687 -394.91687 24000 -14845.985 -14845.985 -15018.342 -15018.342 333.43554 333.43554 68217.41 68217.41 -257.08696 -257.08696 Loop time of 34.0951 on 1 procs for 1000 steps with 4000 atoms Performance: 2.534 ns/day, 9.471 hours/ns, 29.330 timesteps/s 79.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.838 | 33.838 | 33.838 | 0.0 | 99.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038728 | 0.038728 | 0.038728 | 0.0 | 0.11 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.19853 | 0.19853 | 0.19853 | 0.0 | 0.58 Other | | 0.01959 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 415668 ave 415668 max 415668 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 415668 Ave neighs/atom = 103.917 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.336608319571, Press = -3.58531619673284 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -14845.985 -14845.985 -15018.342 -15018.342 333.43554 333.43554 68217.41 68217.41 -257.08696 -257.08696 25000 -14848.383 -14848.383 -15021.068 -15021.068 334.07064 334.07064 68106.789 68106.789 1983.2698 1983.2698 Loop time of 43.9827 on 1 procs for 1000 steps with 4000 atoms Performance: 1.964 ns/day, 12.217 hours/ns, 22.736 timesteps/s 62.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.582 | 43.582 | 43.582 | 0.0 | 99.09 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.039073 | 0.039073 | 0.039073 | 0.0 | 0.09 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.32212 | 0.32212 | 0.32212 | 0.0 | 0.73 Other | | 0.03969 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 415902 ave 415902 max 415902 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 415902 Ave neighs/atom = 103.975 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.364659446367, Press = -3.49775709649338 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -14848.383 -14848.383 -15021.068 -15021.068 334.07064 334.07064 68106.789 68106.789 1983.2698 1983.2698 26000 -14846.759 -14846.759 -15019.922 -15019.922 334.99499 334.99499 68126.378 68126.378 1679.1195 1679.1195 Loop time of 46.5841 on 1 procs for 1000 steps with 4000 atoms Performance: 1.855 ns/day, 12.940 hours/ns, 21.467 timesteps/s 58.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.183 | 46.183 | 46.183 | 0.0 | 99.14 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1198 | 0.1198 | 0.1198 | 0.0 | 0.26 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.25127 | 0.25127 | 0.25127 | 0.0 | 0.54 Other | | 0.02959 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 417600 ave 417600 max 417600 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 417600 Ave neighs/atom = 104.4 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T333.15.out" else "print 'not_converged' file output/vol_T333.15.out" print '${V}' file output/vol_T333.15.out 68190.283840274 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0