# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.05616620182991*${_u_distance} variable latticeconst_converted equal 4.05616620182991*1 lattice fcc ${latticeconst_converted} lattice fcc 4.05616620182991 Lattice spacing in x,y,z = 4.05617 4.05617 4.05617 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (40.5617 40.5617 40.5617) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.0204968 secs variable mass_converted equal 196.96655*${_u_mass} variable mass_converted equal 196.96655*1 # specify which KIM Model to use pair_style kim EMT_Asap_Standard_JacobsenStoltzeNorskov_1996_AlAgAuCuNiPdPt__MO_115316750986_001 pair_coeff * * Au mass 1 ${mass_converted} mass 1 196.96655 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 66734.0105788438 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 66734.0105788438/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 66734.0105788438/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 66734.0105788438/(1*1*${_u_distance}) variable V0_metal equal 66734.0105788438/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 66734.0105788438*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 66734.0105788438 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.61876 ghost atom cutoff = 7.61876 binsize = 3.80938, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.61876 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -15069.684 -15069.684 -15200.54 -15200.54 253.15 253.15 66734.011 66734.011 2094.5011 2094.5011 1000 -14921.892 -14921.892 -15053.277 -15053.277 254.1734 254.1734 67991.352 67991.352 -1937.7759 -1937.7759 Loop time of 59.6106 on 1 procs for 1000 steps with 4000 atoms Performance: 1.449 ns/day, 16.559 hours/ns, 16.776 timesteps/s 44.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 59.056 | 59.056 | 59.056 | 0.0 | 99.07 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1087 | 0.1087 | 0.1087 | 0.0 | 0.18 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.42587 | 0.42587 | 0.42587 | 0.0 | 0.71 Other | | 0.01974 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536000 ave 536000 max 536000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536000 Ave neighs/atom = 134 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -14921.892 -14921.892 -15053.277 -15053.277 254.1734 254.1734 67991.352 67991.352 -1937.7759 -1937.7759 2000 -14933.658 -14933.658 -15068.292 -15068.292 260.45796 260.45796 67846.869 67846.869 -1112.2891 -1112.2891 Loop time of 59.7524 on 1 procs for 1000 steps with 4000 atoms Performance: 1.446 ns/day, 16.598 hours/ns, 16.736 timesteps/s 46.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 59.238 | 59.238 | 59.238 | 0.0 | 99.14 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13943 | 0.13943 | 0.13943 | 0.0 | 0.23 Output | 4.1008e-05 | 4.1008e-05 | 4.1008e-05 | 0.0 | 0.00 Modify | 0.33553 | 0.33553 | 0.33553 | 0.0 | 0.56 Other | | 0.03949 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428924 ave 428924 max 428924 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428924 Ave neighs/atom = 107.231 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -14933.658 -14933.658 -15068.292 -15068.292 260.45796 260.45796 67846.869 67846.869 -1112.2891 -1112.2891 3000 -14936.365 -14936.365 -15066.169 -15066.169 251.11541 251.11541 67816.617 67816.617 -35.593097 -35.593097 Loop time of 58.7895 on 1 procs for 1000 steps with 4000 atoms Performance: 1.470 ns/day, 16.330 hours/ns, 17.010 timesteps/s 47.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.349 | 58.349 | 58.349 | 0.0 | 99.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079215 | 0.079215 | 0.079215 | 0.0 | 0.13 Output | 4.4823e-05 | 4.4823e-05 | 4.4823e-05 | 0.0 | 0.00 Modify | 0.34203 | 0.34203 | 0.34203 | 0.0 | 0.58 Other | | 0.01967 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 431830 ave 431830 max 431830 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 431830 Ave neighs/atom = 107.957 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -14936.365 -14936.365 -15066.169 -15066.169 251.11541 251.11541 67816.617 67816.617 -35.593097 -35.593097 4000 -14934.628 -14934.628 -15064.926 -15064.926 252.06995 252.06995 67818.428 67818.428 136.87443 136.87443 Loop time of 55.821 on 1 procs for 1000 steps with 4000 atoms Performance: 1.548 ns/day, 15.506 hours/ns, 17.914 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 55.367 | 55.367 | 55.367 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079157 | 0.079157 | 0.079157 | 0.0 | 0.14 Output | 3.9101e-05 | 3.9101e-05 | 3.9101e-05 | 0.0 | 0.00 Modify | 0.3157 | 0.3157 | 0.3157 | 0.0 | 0.57 Other | | 0.05958 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 432112 ave 432112 max 432112 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 432112 Ave neighs/atom = 108.028 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -14934.628 -14934.628 -15064.926 -15064.926 252.06995 252.06995 67818.428 67818.428 136.87443 136.87443 5000 -14934.518 -14934.518 -15066.232 -15066.232 254.8087 254.8087 67791.538 67791.538 636.71511 636.71511 Loop time of 48.2644 on 1 procs for 1000 steps with 4000 atoms Performance: 1.790 ns/day, 13.407 hours/ns, 20.719 timesteps/s 58.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.878 | 47.878 | 47.878 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.089055 | 0.089055 | 0.089055 | 0.0 | 0.18 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.27726 | 0.27726 | 0.27726 | 0.0 | 0.57 Other | | 0.01958 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 432444 ave 432444 max 432444 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 432444 Ave neighs/atom = 108.111 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.447090685982, Press = -328.466994493285 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -14934.518 -14934.518 -15066.232 -15066.232 254.8087 254.8087 67791.538 67791.538 636.71511 636.71511 6000 -14935.69 -14935.69 -15064.148 -15064.148 248.51077 248.51077 67812.296 67812.296 446.7745 446.7745 Loop time of 49.7707 on 1 procs for 1000 steps with 4000 atoms Performance: 1.736 ns/day, 13.825 hours/ns, 20.092 timesteps/s 56.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 49.404 | 49.404 | 49.404 | 0.0 | 99.26 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.073527 | 0.073527 | 0.073527 | 0.0 | 0.15 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.23971 | 0.23971 | 0.23971 | 0.0 | 0.48 Other | | 0.05332 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 432872 ave 432872 max 432872 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 432872 Ave neighs/atom = 108.218 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.949904728238, Press = -13.8415709096229 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -14935.69 -14935.69 -15064.148 -15064.148 248.51077 248.51077 67812.296 67812.296 446.7745 446.7745 7000 -14932.691 -14932.691 -15063.879 -15063.879 253.79321 253.79321 67856.19 67856.19 -530.92821 -530.92821 Loop time of 43.0564 on 1 procs for 1000 steps with 4000 atoms Performance: 2.007 ns/day, 11.960 hours/ns, 23.225 timesteps/s 64.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.758 | 42.758 | 42.758 | 0.0 | 99.31 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038776 | 0.038776 | 0.038776 | 0.0 | 0.09 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.2401 | 0.2401 | 0.2401 | 0.0 | 0.56 Other | | 0.01953 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 432440 ave 432440 max 432440 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 432440 Ave neighs/atom = 108.11 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.161696156676, Press = -8.02169848842941 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -14932.691 -14932.691 -15063.879 -15063.879 253.79321 253.79321 67856.19 67856.19 -530.92821 -530.92821 8000 -14936.745 -14936.745 -15065.989 -15065.989 250.03058 250.03058 67843.99 67843.99 -724.95184 -724.95184 Loop time of 55.1329 on 1 procs for 1000 steps with 4000 atoms Performance: 1.567 ns/day, 15.315 hours/ns, 18.138 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 54.758 | 54.758 | 54.758 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058389 | 0.058389 | 0.058389 | 0.0 | 0.11 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.27773 | 0.27773 | 0.27773 | 0.0 | 0.50 Other | | 0.0392 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 431506 ave 431506 max 431506 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 431506 Ave neighs/atom = 107.876 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.050015917083, Press = -2.24103992802655 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -14936.745 -14936.745 -15065.989 -15065.989 250.03058 250.03058 67843.99 67843.99 -724.95184 -724.95184 9000 -14940.119 -14940.119 -15068.832 -15068.832 249.0029 249.0029 67883.017 67883.017 -2263.1646 -2263.1646 Loop time of 55.1746 on 1 procs for 1000 steps with 4000 atoms Performance: 1.566 ns/day, 15.326 hours/ns, 18.124 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 54.698 | 54.698 | 54.698 | 0.0 | 99.14 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.068586 | 0.068586 | 0.068586 | 0.0 | 0.12 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.34818 | 0.34818 | 0.34818 | 0.0 | 0.63 Other | | 0.05939 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 431588 ave 431588 max 431588 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 431588 Ave neighs/atom = 107.897 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.998185531308, Press = -2.16321435781087 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -14940.119 -14940.119 -15068.832 -15068.832 249.0029 249.0029 67883.017 67883.017 -2263.1646 -2263.1646 10000 -14936.164 -14936.164 -15067.406 -15067.406 253.89595 253.89595 67882.2 67882.2 -1839.4349 -1839.4349 Loop time of 55.492 on 1 procs for 1000 steps with 4000 atoms Performance: 1.557 ns/day, 15.414 hours/ns, 18.021 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 55.018 | 55.018 | 55.018 | 0.0 | 99.14 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11574 | 0.11574 | 0.11574 | 0.0 | 0.21 Output | 5.1022e-05 | 5.1022e-05 | 5.1022e-05 | 0.0 | 0.00 Modify | 0.33939 | 0.33939 | 0.33939 | 0.0 | 0.61 Other | | 0.01935 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 430676 ave 430676 max 430676 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 430676 Ave neighs/atom = 107.669 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.864039294761, Press = -1.98594342589924 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -14936.164 -14936.164 -15067.406 -15067.406 253.89595 253.89595 67882.2 67882.2 -1839.4349 -1839.4349 11000 -14936.065 -14936.065 -15067.782 -15067.782 254.8158 254.8158 67824.008 67824.008 -487.05445 -487.05445 Loop time of 55.4671 on 1 procs for 1000 steps with 4000 atoms Performance: 1.558 ns/day, 15.408 hours/ns, 18.029 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 54.889 | 54.889 | 54.889 | 0.0 | 98.96 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.078778 | 0.078778 | 0.078778 | 0.0 | 0.14 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.43952 | 0.43952 | 0.43952 | 0.0 | 0.79 Other | | 0.05953 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 430788 ave 430788 max 430788 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 430788 Ave neighs/atom = 107.697 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.691086446302, Press = -3.69452254283798 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -14936.065 -14936.065 -15067.782 -15067.782 254.8158 254.8158 67824.008 67824.008 -487.05445 -487.05445 12000 -14933.739 -14933.739 -15064.246 -15064.246 252.47477 252.47477 67846.408 67846.408 -272.37943 -272.37943 Loop time of 55.5255 on 1 procs for 1000 steps with 4000 atoms Performance: 1.556 ns/day, 15.424 hours/ns, 18.010 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 55.118 | 55.118 | 55.118 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058961 | 0.058961 | 0.058961 | 0.0 | 0.11 Output | 5.1975e-05 | 5.1975e-05 | 5.1975e-05 | 0.0 | 0.00 Modify | 0.30883 | 0.30883 | 0.30883 | 0.0 | 0.56 Other | | 0.03938 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 432248 ave 432248 max 432248 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 432248 Ave neighs/atom = 108.062 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.80551896796, Press = -2.93345487906494 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -14933.739 -14933.739 -15064.246 -15064.246 252.47477 252.47477 67846.408 67846.408 -272.37943 -272.37943 13000 -14933.525 -14933.525 -15066.298 -15066.298 256.85832 256.85832 67828.125 67828.125 -271.14364 -271.14364 Loop time of 55.2002 on 1 procs for 1000 steps with 4000 atoms Performance: 1.565 ns/day, 15.333 hours/ns, 18.116 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 54.764 | 54.764 | 54.764 | 0.0 | 99.21 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098651 | 0.098651 | 0.098651 | 0.0 | 0.18 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.31773 | 0.31773 | 0.31773 | 0.0 | 0.58 Other | | 0.01938 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 431902 ave 431902 max 431902 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 431902 Ave neighs/atom = 107.975 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.741097234542, Press = -2.78314379713784 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -14933.525 -14933.525 -15066.298 -15066.298 256.85832 256.85832 67828.125 67828.125 -271.14364 -271.14364 14000 -14934.451 -14934.451 -15066.818 -15066.818 256.07166 256.07166 67844.475 67844.475 -815.59262 -815.59262 Loop time of 50.4881 on 1 procs for 1000 steps with 4000 atoms Performance: 1.711 ns/day, 14.024 hours/ns, 19.807 timesteps/s 54.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 50.149 | 50.149 | 50.149 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038331 | 0.038331 | 0.038331 | 0.0 | 0.08 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.26144 | 0.26144 | 0.26144 | 0.0 | 0.52 Other | | 0.03937 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 431956 ave 431956 max 431956 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 431956 Ave neighs/atom = 107.989 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.911333568242, Press = -3.49142276545163 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -14934.451 -14934.451 -15066.818 -15066.818 256.07166 256.07166 67844.475 67844.475 -815.59262 -815.59262 15000 -14935.703 -14935.703 -15066.773 -15066.773 253.56428 253.56428 67856.257 67856.257 -1144.2995 -1144.2995 Loop time of 49.6614 on 1 procs for 1000 steps with 4000 atoms Performance: 1.740 ns/day, 13.795 hours/ns, 20.136 timesteps/s 55.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 49.323 | 49.323 | 49.323 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11921 | 0.11921 | 0.11921 | 0.0 | 0.24 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.19885 | 0.19885 | 0.19885 | 0.0 | 0.40 Other | | 0.01987 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 431644 ave 431644 max 431644 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 431644 Ave neighs/atom = 107.911 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.890959496647, Press = -3.75003660312931 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -14935.703 -14935.703 -15066.773 -15066.773 253.56428 253.56428 67856.257 67856.257 -1144.2995 -1144.2995 16000 -14933.783 -14933.783 -15065.587 -15065.587 254.98422 254.98422 67835.014 67835.014 -475.02486 -475.02486 Loop time of 51.01 on 1 procs for 1000 steps with 4000 atoms Performance: 1.694 ns/day, 14.169 hours/ns, 19.604 timesteps/s 54.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 50.545 | 50.545 | 50.545 | 0.0 | 99.09 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098586 | 0.098586 | 0.098586 | 0.0 | 0.19 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.3474 | 0.3474 | 0.3474 | 0.0 | 0.68 Other | | 0.0193 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 431434 ave 431434 max 431434 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 431434 Ave neighs/atom = 107.859 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.840384919066, Press = -3.00132084584016 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -14933.783 -14933.783 -15065.587 -15065.587 254.98422 254.98422 67835.014 67835.014 -475.02486 -475.02486 17000 -14935.919 -14935.919 -15064.402 -15064.402 248.55875 248.55875 67851.275 67851.275 -563.19343 -563.19343 Loop time of 47.747 on 1 procs for 1000 steps with 4000 atoms Performance: 1.810 ns/day, 13.263 hours/ns, 20.944 timesteps/s 57.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.187 | 47.187 | 47.187 | 0.0 | 98.83 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13003 | 0.13003 | 0.13003 | 0.0 | 0.27 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.37 | 0.37 | 0.37 | 0.0 | 0.77 Other | | 0.05989 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 432078 ave 432078 max 432078 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 432078 Ave neighs/atom = 108.019 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.843887882739, Press = -2.46020246182336 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -14935.919 -14935.919 -15064.402 -15064.402 248.55875 248.55875 67851.275 67851.275 -563.19343 -563.19343 18000 -14936.417 -14936.417 -15065.013 -15065.013 248.77818 248.77818 67817.645 67817.645 160.55314 160.55314 Loop time of 49.396 on 1 procs for 1000 steps with 4000 atoms Performance: 1.749 ns/day, 13.721 hours/ns, 20.245 timesteps/s 56.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 49 | 49 | 49 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058492 | 0.058492 | 0.058492 | 0.0 | 0.12 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.31819 | 0.31819 | 0.31819 | 0.0 | 0.64 Other | | 0.01944 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 431770 ave 431770 max 431770 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 431770 Ave neighs/atom = 107.942 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.966715126516, Press = -1.38927649791364 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -14936.417 -14936.417 -15065.013 -15065.013 248.77818 248.77818 67817.645 67817.645 160.55314 160.55314 19000 -14931.822 -14931.822 -15062.975 -15062.975 253.72488 253.72488 67867.891 67867.891 -686.79986 -686.79986 Loop time of 47.2094 on 1 procs for 1000 steps with 4000 atoms Performance: 1.830 ns/day, 13.114 hours/ns, 21.182 timesteps/s 58.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.929 | 46.929 | 46.929 | 0.0 | 99.41 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059672 | 0.059672 | 0.059672 | 0.0 | 0.13 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.20124 | 0.20124 | 0.20124 | 0.0 | 0.43 Other | | 0.0193 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 432312 ave 432312 max 432312 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 432312 Ave neighs/atom = 108.078 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.978362986042, Press = -0.769016697467247 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -14931.822 -14931.822 -15062.975 -15062.975 253.72488 253.72488 67867.891 67867.891 -686.79986 -686.79986 20000 -14934.446 -14934.446 -15065.032 -15065.032 252.6277 252.6277 67864.727 67864.727 -986.6723 -986.6723 Loop time of 49.1542 on 1 procs for 1000 steps with 4000 atoms Performance: 1.758 ns/day, 13.654 hours/ns, 20.344 timesteps/s 56.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.818 | 48.818 | 48.818 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038134 | 0.038134 | 0.038134 | 0.0 | 0.08 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.27844 | 0.27844 | 0.27844 | 0.0 | 0.57 Other | | 0.01937 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 431126 ave 431126 max 431126 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 431126 Ave neighs/atom = 107.781 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.032519694585, Press = -2.8726849277959 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -14934.446 -14934.446 -15065.032 -15065.032 252.6277 252.6277 67864.727 67864.727 -986.6723 -986.6723 21000 -14936.898 -14936.898 -15068.29 -15068.29 254.18693 254.18693 67863.839 67863.839 -1526.5463 -1526.5463 Loop time of 47.6545 on 1 procs for 1000 steps with 4000 atoms Performance: 1.813 ns/day, 13.237 hours/ns, 20.984 timesteps/s 58.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.206 | 47.206 | 47.206 | 0.0 | 99.06 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058925 | 0.058925 | 0.058925 | 0.0 | 0.12 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.36893 | 0.36893 | 0.36893 | 0.0 | 0.77 Other | | 0.02033 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 431452 ave 431452 max 431452 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 431452 Ave neighs/atom = 107.863 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.038376971156, Press = -1.89866986820742 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -14936.898 -14936.898 -15068.29 -15068.29 254.18693 254.18693 67863.839 67863.839 -1526.5463 -1526.5463 22000 -14932.93 -14932.93 -15063.764 -15063.764 253.10857 253.10857 67855.841 67855.841 -527.32041 -527.32041 Loop time of 45.6514 on 1 procs for 1000 steps with 4000 atoms Performance: 1.893 ns/day, 12.681 hours/ns, 21.905 timesteps/s 60.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 45.276 | 45.276 | 45.276 | 0.0 | 99.18 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.03896 | 0.03896 | 0.03896 | 0.0 | 0.09 Output | 3.2187e-05 | 3.2187e-05 | 3.2187e-05 | 0.0 | 0.00 Modify | 0.29756 | 0.29756 | 0.29756 | 0.0 | 0.65 Other | | 0.03923 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 430876 ave 430876 max 430876 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 430876 Ave neighs/atom = 107.719 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.979190105104, Press = -1.13510726749095 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -14932.93 -14932.93 -15063.764 -15063.764 253.10857 253.10857 67855.841 67855.841 -527.32041 -527.32041 23000 -14937.376 -14937.376 -15065.435 -15065.435 247.73914 247.73914 67817.488 67817.488 96.19569 96.19569 Loop time of 46.9793 on 1 procs for 1000 steps with 4000 atoms Performance: 1.839 ns/day, 13.050 hours/ns, 21.286 timesteps/s 59.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.645 | 46.645 | 46.645 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.07899 | 0.07899 | 0.07899 | 0.0 | 0.17 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.21622 | 0.21622 | 0.21622 | 0.0 | 0.46 Other | | 0.03934 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 431434 ave 431434 max 431434 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 431434 Ave neighs/atom = 107.859 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.995086353652, Press = -1.7743920592856 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -14937.376 -14937.376 -15065.435 -15065.435 247.73914 247.73914 67817.488 67817.488 96.19569 96.19569 24000 -14932.101 -14932.101 -15066.267 -15066.267 259.55351 259.55351 67821.921 67821.921 -160.24319 -160.24319 Loop time of 50.8016 on 1 procs for 1000 steps with 4000 atoms Performance: 1.701 ns/day, 14.112 hours/ns, 19.684 timesteps/s 54.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 50.406 | 50.406 | 50.406 | 0.0 | 99.22 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1186 | 0.1186 | 0.1186 | 0.0 | 0.23 Output | 3.8862e-05 | 3.8862e-05 | 3.8862e-05 | 0.0 | 0.00 Modify | 0.2381 | 0.2381 | 0.2381 | 0.0 | 0.47 Other | | 0.03926 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 432598 ave 432598 max 432598 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 432598 Ave neighs/atom = 108.15 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.018446002438, Press = -1.40802123130329 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -14932.101 -14932.101 -15066.267 -15066.267 259.55351 259.55351 67821.921 67821.921 -160.24319 -160.24319 25000 -14934.808 -14934.808 -15062.931 -15062.931 247.86096 247.86096 67847.391 67847.391 -213.08895 -213.08895 Loop time of 48.1298 on 1 procs for 1000 steps with 4000 atoms Performance: 1.795 ns/day, 13.369 hours/ns, 20.777 timesteps/s 57.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.646 | 47.646 | 47.646 | 0.0 | 98.99 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098033 | 0.098033 | 0.098033 | 0.0 | 0.20 Output | 3.8862e-05 | 3.8862e-05 | 3.8862e-05 | 0.0 | 0.00 Modify | 0.34654 | 0.34654 | 0.34654 | 0.0 | 0.72 Other | | 0.03959 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 432140 ave 432140 max 432140 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 432140 Ave neighs/atom = 108.035 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.052221913347, Press = -0.907624301864449 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -14934.808 -14934.808 -15062.931 -15062.931 247.86096 247.86096 67847.391 67847.391 -213.08895 -213.08895 26000 -14935.346 -14935.346 -15066.107 -15066.107 252.96534 252.96534 67798.601 67798.601 423.81538 423.81538 Loop time of 45.6352 on 1 procs for 1000 steps with 4000 atoms Performance: 1.893 ns/day, 12.676 hours/ns, 21.913 timesteps/s 60.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 45.318 | 45.318 | 45.318 | 0.0 | 99.31 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.039084 | 0.039084 | 0.039084 | 0.0 | 0.09 Output | 3.2187e-05 | 3.2187e-05 | 3.2187e-05 | 0.0 | 0.00 Modify | 0.25847 | 0.25847 | 0.25847 | 0.0 | 0.57 Other | | 0.01944 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 432008 ave 432008 max 432008 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 432008 Ave neighs/atom = 108.002 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 67824.0170307262 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0