# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.080000087618828*${_u_distance} variable latticeconst_converted equal 4.080000087618828*1 lattice fcc ${latticeconst_converted} lattice fcc 4.08000008761883 Lattice spacing in x,y,z = 4.0800001 4.0800001 4.0800001 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (40.800001 40.800001 40.800001) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (40.800001 40.800001 40.800001) create_atoms CPU = 0.006 seconds variable mass_converted equal 196.96655*${_u_mass} variable mass_converted equal 196.96655*1 kim_interactions Au WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Au #=== BEGIN kim interactions ================================== variable kim_update equal 0 variable kim_periodic equal 1 pair_style adp pair_coeff * * /tmp/kim-shared-library-parameter-file-directory-XXXXXXmVnnDH/AuRh.adp.txt Au #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 196.96655 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 67917.3163756143 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 67917.3163756143/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 67917.3163756143/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 67917.3163756143/(1*1*${_u_distance}) variable V0_metal equal 67917.3163756143/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 67917.3163756143*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 67917.3163756143 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 333.15*${_u_temperature} variable temp_converted equal 333.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 333.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "333.15 - 0.2" variable T_up equal "333.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/SM_066295357485_000#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 9.3498742 ghost atom cutoff = 9.3498742 binsize = 4.6749371, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair adp, perpetual attributes: half, newton on pair build: half/bin/atomonly/newton stencil: half/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -15067.791 -15067.791 -15240 -15240 333.15 333.15 67917.316 67917.316 2708.253 2708.253 1000 -14877.397 -14877.397 -15054.099 -15054.099 341.84102 341.84102 69151.625 69151.625 -2168.6888 -2168.6888 Loop time of 136.155 on 1 procs for 1000 steps with 4000 atoms Performance: 0.635 ns/day, 37.821 hours/ns, 7.345 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 135.08 | 135.08 | 135.08 | 0.0 | 99.21 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21185 | 0.21185 | 0.21185 | 0.0 | 0.16 Output | 0.00027921 | 0.00027921 | 0.00027921 | 0.0 | 0.00 Modify | 0.7553 | 0.7553 | 0.7553 | 0.0 | 0.55 Other | | 0.1061 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 400000.0 ave 400000 max 400000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 400000 Ave neighs/atom = 100.00000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -14877.397 -14877.397 -15054.099 -15054.099 341.84102 341.84102 69151.625 69151.625 -2168.6888 -2168.6888 2000 -14898.3 -14898.3 -15071.311 -15071.311 334.70064 334.70064 68969.281 68969.281 -149.47543 -149.47543 Loop time of 138.846 on 1 procs for 1000 steps with 4000 atoms Performance: 0.622 ns/day, 38.568 hours/ns, 7.202 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 137.7 | 137.7 | 137.7 | 0.0 | 99.18 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22288 | 0.22288 | 0.22288 | 0.0 | 0.16 Output | 0.00020483 | 0.00020483 | 0.00020483 | 0.0 | 0.00 Modify | 0.80573 | 0.80573 | 0.80573 | 0.0 | 0.58 Other | | 0.1147 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 395039.0 ave 395039 max 395039 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 395039 Ave neighs/atom = 98.759750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -14898.3 -14898.3 -15071.311 -15071.311 334.70064 334.70064 68969.281 68969.281 -149.47543 -149.47543 3000 -14892.496 -14892.496 -15066.984 -15066.984 337.55983 337.55983 69074.502 69074.502 -2143.3835 -2143.3835 Loop time of 139.757 on 1 procs for 1000 steps with 4000 atoms Performance: 0.618 ns/day, 38.821 hours/ns, 7.155 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 138.72 | 138.72 | 138.72 | 0.0 | 99.26 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20837 | 0.20837 | 0.20837 | 0.0 | 0.15 Output | 0.00025615 | 0.00025615 | 0.00025615 | 0.0 | 0.00 Modify | 0.71875 | 0.71875 | 0.71875 | 0.0 | 0.51 Other | | 0.1045 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396129.0 ave 396129 max 396129 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396129 Ave neighs/atom = 99.032250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -14892.496 -14892.496 -15066.984 -15066.984 337.55983 337.55983 69074.502 69074.502 -2143.3835 -2143.3835 4000 -14896.522 -14896.522 -15065.5 -15065.5 326.90042 326.90042 68988.984 68988.984 196.00028 196.00028 Loop time of 142.032 on 1 procs for 1000 steps with 4000 atoms Performance: 0.608 ns/day, 39.453 hours/ns, 7.041 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 140.96 | 140.96 | 140.96 | 0.0 | 99.24 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21201 | 0.21201 | 0.21201 | 0.0 | 0.15 Output | 0.00025627 | 0.00025627 | 0.00025627 | 0.0 | 0.00 Modify | 0.75463 | 0.75463 | 0.75463 | 0.0 | 0.53 Other | | 0.107 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 395588.0 ave 395588 max 395588 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 395588 Ave neighs/atom = 98.897000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -14896.522 -14896.522 -15065.5 -15065.5 326.90042 326.90042 68988.984 68988.984 196.00028 196.00028 5000 -14889.076 -14889.076 -15062.699 -15062.699 335.88567 335.88567 68945.207 68945.207 1787.8903 1787.8903 Loop time of 124.355 on 1 procs for 1000 steps with 4000 atoms Performance: 0.695 ns/day, 34.543 hours/ns, 8.041 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.41 | 123.41 | 123.41 | 0.0 | 99.24 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19388 | 0.19388 | 0.19388 | 0.0 | 0.16 Output | 0.00018888 | 0.00018888 | 0.00018888 | 0.0 | 0.00 Modify | 0.65235 | 0.65235 | 0.65235 | 0.0 | 0.52 Other | | 0.1013 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396090.0 ave 396090 max 396090 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396090 Ave neighs/atom = 99.022500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 337.68693136728, Press = -81.0307497893799 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -14889.076 -14889.076 -15062.699 -15062.699 335.88567 335.88567 68945.207 68945.207 1787.8903 1787.8903 6000 -14893.986 -14893.986 -15067.24 -15067.24 335.17255 335.17255 69060.12 69060.12 -1909.6419 -1909.6419 Loop time of 125.27 on 1 procs for 1000 steps with 4000 atoms Performance: 0.690 ns/day, 34.797 hours/ns, 7.983 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 124.3 | 124.3 | 124.3 | 0.0 | 99.23 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1953 | 0.1953 | 0.1953 | 0.0 | 0.16 Output | 0.00018817 | 0.00018817 | 0.00018817 | 0.0 | 0.00 Modify | 0.67314 | 0.67314 | 0.67314 | 0.0 | 0.54 Other | | 0.1014 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 395996.0 ave 395996 max 395996 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 395996 Ave neighs/atom = 98.999000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 334.052604177278, Press = -41.6255561616401 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -14893.986 -14893.986 -15067.24 -15067.24 335.17255 335.17255 69060.12 69060.12 -1909.6419 -1909.6419 7000 -14892.937 -14892.937 -15065.819 -15065.819 334.45263 334.45263 68949.995 68949.995 1164.7867 1164.7867 Loop time of 125.492 on 1 procs for 1000 steps with 4000 atoms Performance: 0.688 ns/day, 34.859 hours/ns, 7.969 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 124.52 | 124.52 | 124.52 | 0.0 | 99.23 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19405 | 0.19405 | 0.19405 | 0.0 | 0.15 Output | 0.00017879 | 0.00017879 | 0.00017879 | 0.0 | 0.00 Modify | 0.67153 | 0.67153 | 0.67153 | 0.0 | 0.54 Other | | 0.1015 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 395745.0 ave 395745 max 395745 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 395745 Ave neighs/atom = 98.936250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.232548688726, Press = -21.53234594322 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -14892.937 -14892.937 -15065.819 -15065.819 334.45263 334.45263 68949.995 68949.995 1164.7867 1164.7867 8000 -14897.594 -14897.594 -15068.726 -15068.726 331.06637 331.06637 68956.324 68956.324 543.10523 543.10523 Loop time of 156.147 on 1 procs for 1000 steps with 4000 atoms Performance: 0.553 ns/day, 43.374 hours/ns, 6.404 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 155.04 | 155.04 | 155.04 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21702 | 0.21702 | 0.21702 | 0.0 | 0.14 Output | 0.0001848 | 0.0001848 | 0.0001848 | 0.0 | 0.00 Modify | 0.78067 | 0.78067 | 0.78067 | 0.0 | 0.50 Other | | 0.1058 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396224.0 ave 396224 max 396224 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396224 Ave neighs/atom = 99.056000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.237918818346, Press = -20.7985537155586 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -14897.594 -14897.594 -15068.726 -15068.726 331.06637 331.06637 68956.324 68956.324 543.10523 543.10523 9000 -14890.862 -14890.862 -15061.356 -15061.356 329.83168 329.83168 69003.578 69003.578 452.58671 452.58671 Loop time of 187.036 on 1 procs for 1000 steps with 4000 atoms Performance: 0.462 ns/day, 51.954 hours/ns, 5.347 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 185.85 | 185.85 | 185.85 | 0.0 | 99.36 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23649 | 0.23649 | 0.23649 | 0.0 | 0.13 Output | 0.00018864 | 0.00018864 | 0.00018864 | 0.0 | 0.00 Modify | 0.84665 | 0.84665 | 0.84665 | 0.0 | 0.45 Other | | 0.1061 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396092.0 ave 396092 max 396092 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396092 Ave neighs/atom = 99.023000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.158815506362, Press = -9.38139184338735 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -14890.862 -14890.862 -15061.356 -15061.356 329.83168 329.83168 69003.578 69003.578 452.58671 452.58671 10000 -14895.783 -14895.783 -15069.066 -15069.066 335.22733 335.22733 68985.271 68985.271 -216.44963 -216.44963 Loop time of 166.985 on 1 procs for 1000 steps with 4000 atoms Performance: 0.517 ns/day, 46.385 hours/ns, 5.989 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 165.81 | 165.81 | 165.81 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23151 | 0.23151 | 0.23151 | 0.0 | 0.14 Output | 0.00022976 | 0.00022976 | 0.00022976 | 0.0 | 0.00 Modify | 0.84264 | 0.84264 | 0.84264 | 0.0 | 0.50 Other | | 0.1051 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 395741.0 ave 395741 max 395741 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 395741 Ave neighs/atom = 98.935250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.469122193891, Press = -4.01617010167412 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -14895.783 -14895.783 -15069.066 -15069.066 335.22733 335.22733 68985.271 68985.271 -216.44963 -216.44963 11000 -14892.948 -14892.948 -15065.477 -15065.477 333.7676 333.7676 68985.328 68985.328 296.22928 296.22928 Loop time of 166.107 on 1 procs for 1000 steps with 4000 atoms Performance: 0.520 ns/day, 46.141 hours/ns, 6.020 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 165.02 | 165.02 | 165.02 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22029 | 0.22029 | 0.22029 | 0.0 | 0.13 Output | 0.00018183 | 0.00018183 | 0.00018183 | 0.0 | 0.00 Modify | 0.76168 | 0.76168 | 0.76168 | 0.0 | 0.46 Other | | 0.1008 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396115.0 ave 396115 max 396115 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396115 Ave neighs/atom = 99.028750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.340913118377, Press = -7.96573016607662 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -14892.948 -14892.948 -15065.477 -15065.477 333.7676 333.7676 68985.328 68985.328 296.22928 296.22928 12000 -14895.661 -14895.661 -15064.627 -15064.627 326.87544 326.87544 69030.739 69030.739 -788.74102 -788.74102 Loop time of 161.054 on 1 procs for 1000 steps with 4000 atoms Performance: 0.536 ns/day, 44.737 hours/ns, 6.209 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 159.87 | 159.87 | 159.87 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22947 | 0.22947 | 0.22947 | 0.0 | 0.14 Output | 0.00022376 | 0.00022376 | 0.00022376 | 0.0 | 0.00 Modify | 0.84642 | 0.84642 | 0.84642 | 0.0 | 0.53 Other | | 0.1055 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396010.0 ave 396010 max 396010 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396010 Ave neighs/atom = 99.002500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.416925727094, Press = -4.8284110988262 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -14895.661 -14895.661 -15064.627 -15064.627 326.87544 326.87544 69030.739 69030.739 -788.74102 -788.74102 13000 -14890.603 -14890.603 -15064.656 -15064.656 336.7164 336.7164 68952.789 68952.789 1313.4077 1313.4077 Loop time of 133.719 on 1 procs for 1000 steps with 4000 atoms Performance: 0.646 ns/day, 37.144 hours/ns, 7.478 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.67 | 132.67 | 132.67 | 0.0 | 99.21 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2048 | 0.2048 | 0.2048 | 0.0 | 0.15 Output | 0.00022929 | 0.00022929 | 0.00022929 | 0.0 | 0.00 Modify | 0.74265 | 0.74265 | 0.74265 | 0.0 | 0.56 Other | | 0.1026 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 395889.0 ave 395889 max 395889 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 395889 Ave neighs/atom = 98.972250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.378615035001, Press = -9.15474897410995 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -14890.603 -14890.603 -15064.656 -15064.656 336.7164 336.7164 68952.789 68952.789 1313.4077 1313.4077 14000 -14894.723 -14894.723 -15067.193 -15067.193 333.65503 333.65503 68963.154 68963.154 646.3452 646.3452 Loop time of 166.116 on 1 procs for 1000 steps with 4000 atoms Performance: 0.520 ns/day, 46.143 hours/ns, 6.020 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 164.93 | 164.93 | 164.93 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23051 | 0.23051 | 0.23051 | 0.0 | 0.14 Output | 0.00023023 | 0.00023023 | 0.00023023 | 0.0 | 0.00 Modify | 0.84657 | 0.84657 | 0.84657 | 0.0 | 0.51 Other | | 0.1075 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396297.0 ave 396297 max 396297 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396297 Ave neighs/atom = 99.074250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.444770007501, Press = -5.26623472899171 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -14894.723 -14894.723 -15067.193 -15067.193 333.65503 333.65503 68963.154 68963.154 646.3452 646.3452 15000 -14894.053 -14894.053 -15068.378 -15068.378 337.24327 337.24327 69046.215 69046.215 -1644.6839 -1644.6839 Loop time of 174.071 on 1 procs for 1000 steps with 4000 atoms Performance: 0.496 ns/day, 48.353 hours/ns, 5.745 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 172.9 | 172.9 | 172.9 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22975 | 0.22975 | 0.22975 | 0.0 | 0.13 Output | 0.00018283 | 0.00018283 | 0.00018283 | 0.0 | 0.00 Modify | 0.83797 | 0.83797 | 0.83797 | 0.0 | 0.48 Other | | 0.1064 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396141.0 ave 396141 max 396141 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396141 Ave neighs/atom = 99.035250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.286582313283, Press = -0.548509825356739 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -14894.053 -14894.053 -15068.378 -15068.378 337.24327 337.24327 69046.215 69046.215 -1644.6839 -1644.6839 16000 -14896.407 -14896.407 -15065.947 -15065.947 327.98725 327.98725 68988.8 68988.8 125.78445 125.78445 Loop time of 168.676 on 1 procs for 1000 steps with 4000 atoms Performance: 0.512 ns/day, 46.855 hours/ns, 5.929 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 167.49 | 167.49 | 167.49 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23266 | 0.23266 | 0.23266 | 0.0 | 0.14 Output | 0.00022454 | 0.00022454 | 0.00022454 | 0.0 | 0.00 Modify | 0.84837 | 0.84837 | 0.84837 | 0.0 | 0.50 Other | | 0.1045 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 395808.0 ave 395808 max 395808 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 395808 Ave neighs/atom = 98.952000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.216459405389, Press = -3.24136893264776 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -14896.407 -14896.407 -15065.947 -15065.947 327.98725 327.98725 68988.8 68988.8 125.78445 125.78445 17000 -14897.282 -14897.282 -15068.152 -15068.152 330.55845 330.55845 68924.202 68924.202 1433.8565 1433.8565 Loop time of 150.958 on 1 procs for 1000 steps with 4000 atoms Performance: 0.572 ns/day, 41.933 hours/ns, 6.624 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 149.83 | 149.83 | 149.83 | 0.0 | 99.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22022 | 0.22022 | 0.22022 | 0.0 | 0.15 Output | 0.00017598 | 0.00017598 | 0.00017598 | 0.0 | 0.00 Modify | 0.80639 | 0.80639 | 0.80639 | 0.0 | 0.53 Other | | 0.1056 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396064.0 ave 396064 max 396064 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396064 Ave neighs/atom = 99.016000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.175784543089, Press = -6.49787984935922 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -14897.282 -14897.282 -15068.152 -15068.152 330.55845 330.55845 68924.202 68924.202 1433.8565 1433.8565 18000 -14893.872 -14893.872 -15067.139 -15067.139 335.19754 335.19754 68964.918 68964.918 606.37977 606.37977 Loop time of 126.287 on 1 procs for 1000 steps with 4000 atoms Performance: 0.684 ns/day, 35.080 hours/ns, 7.918 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 125.28 | 125.28 | 125.28 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19844 | 0.19844 | 0.19844 | 0.0 | 0.16 Output | 0.00027659 | 0.00027659 | 0.00027659 | 0.0 | 0.00 Modify | 0.70428 | 0.70428 | 0.70428 | 0.0 | 0.56 Other | | 0.1015 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396340.0 ave 396340 max 396340 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396340 Ave neighs/atom = 99.085000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.216590725895, Press = -2.19528199916892 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -14893.872 -14893.872 -15067.139 -15067.139 335.19754 335.19754 68964.918 68964.918 606.37977 606.37977 19000 -14894.922 -14894.922 -15066.054 -15066.054 331.06731 331.06731 69028.648 69028.648 -915.2496 -915.2496 Loop time of 147.21 on 1 procs for 1000 steps with 4000 atoms Performance: 0.587 ns/day, 40.892 hours/ns, 6.793 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 146.12 | 146.12 | 146.12 | 0.0 | 99.26 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21436 | 0.21436 | 0.21436 | 0.0 | 0.15 Output | 0.00017672 | 0.00017672 | 0.00017672 | 0.0 | 0.00 Modify | 0.76738 | 0.76738 | 0.76738 | 0.0 | 0.52 Other | | 0.1055 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396289.0 ave 396289 max 396289 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396289 Ave neighs/atom = 99.072250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.190371115583, Press = -4.40415857648326 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -14894.922 -14894.922 -15066.054 -15066.054 331.06731 331.06731 69028.648 69028.648 -915.2496 -915.2496 20000 -14893.592 -14893.592 -15067.718 -15067.718 336.85928 336.85928 69002.397 69002.397 -462.35916 -462.35916 Loop time of 145.545 on 1 procs for 1000 steps with 4000 atoms Performance: 0.594 ns/day, 40.429 hours/ns, 6.871 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 144.49 | 144.49 | 144.49 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21119 | 0.21119 | 0.21119 | 0.0 | 0.15 Output | 0.00018372 | 0.00018372 | 0.00018372 | 0.0 | 0.00 Modify | 0.74242 | 0.74242 | 0.74242 | 0.0 | 0.51 Other | | 0.1032 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 395829.0 ave 395829 max 395829 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 395829 Ave neighs/atom = 98.957250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.212701745155, Press = -5.84681700955385 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -14893.592 -14893.592 -15067.718 -15067.718 336.85928 336.85928 69002.397 69002.397 -462.35916 -462.35916 21000 -14891.48 -14891.48 -15066.351 -15066.351 338.30091 338.30091 68966.77 68966.77 715.94313 715.94313 Loop time of 153.473 on 1 procs for 1000 steps with 4000 atoms Performance: 0.563 ns/day, 42.631 hours/ns, 6.516 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 152.44 | 152.44 | 152.44 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20967 | 0.20967 | 0.20967 | 0.0 | 0.14 Output | 0.00018708 | 0.00018708 | 0.00018708 | 0.0 | 0.00 Modify | 0.72145 | 0.72145 | 0.72145 | 0.0 | 0.47 Other | | 0.1001 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396031.0 ave 396031 max 396031 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396031 Ave neighs/atom = 99.007750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.179204489688, Press = -4.00228311960336 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -14891.48 -14891.48 -15066.351 -15066.351 338.30091 338.30091 68966.77 68966.77 715.94313 715.94313 22000 -14900.487 -14900.487 -15069.56 -15069.56 327.08291 327.08291 68947.397 68947.397 631.31973 631.31973 Loop time of 145.933 on 1 procs for 1000 steps with 4000 atoms Performance: 0.592 ns/day, 40.537 hours/ns, 6.852 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 144.95 | 144.95 | 144.95 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20704 | 0.20704 | 0.20704 | 0.0 | 0.14 Output | 0.00017832 | 0.00017832 | 0.00017832 | 0.0 | 0.00 Modify | 0.68424 | 0.68424 | 0.68424 | 0.0 | 0.47 Other | | 0.09609 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396087.0 ave 396087 max 396087 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396087 Ave neighs/atom = 99.021750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.193519856583, Press = -1.42056649516986 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -14900.487 -14900.487 -15069.56 -15069.56 327.08291 327.08291 68947.397 68947.397 631.31973 631.31973 23000 -14893.791 -14893.791 -15066.807 -15066.807 334.7118 334.7118 68946.703 68946.703 1068.1534 1068.1534 Loop time of 118.987 on 1 procs for 1000 steps with 4000 atoms Performance: 0.726 ns/day, 33.052 hours/ns, 8.404 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 118.02 | 118.02 | 118.02 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19412 | 0.19412 | 0.19412 | 0.0 | 0.16 Output | 0.00017775 | 0.00017775 | 0.00017775 | 0.0 | 0.00 Modify | 0.66994 | 0.66994 | 0.66994 | 0.0 | 0.56 Other | | 0.1011 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396338.0 ave 396338 max 396338 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396338 Ave neighs/atom = 99.084500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.177587294631, Press = -1.44355108438731 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -14893.791 -14893.791 -15066.807 -15066.807 334.7118 334.7118 68946.703 68946.703 1068.1534 1068.1534 24000 -14900.683 -14900.683 -15070.232 -15070.232 328.00339 328.00339 69035.082 69035.082 -1718.9135 -1718.9135 Loop time of 114.082 on 1 procs for 1000 steps with 4000 atoms Performance: 0.757 ns/day, 31.689 hours/ns, 8.766 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.12 | 113.12 | 113.12 | 0.0 | 99.15 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19356 | 0.19356 | 0.19356 | 0.0 | 0.17 Output | 0.00045141 | 0.00045141 | 0.00045141 | 0.0 | 0.00 Modify | 0.66853 | 0.66853 | 0.66853 | 0.0 | 0.59 Other | | 0.1018 | | | 0.09 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396094.0 ave 396094 max 396094 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396094 Ave neighs/atom = 99.023500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.146507788009, Press = -2.65983176000812 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -14900.683 -14900.683 -15070.232 -15070.232 328.00339 328.00339 69035.082 69035.082 -1718.9135 -1718.9135 25000 -14892.043 -14892.043 -15066.006 -15066.006 336.5437 336.5437 68984.401 68984.401 299.27805 299.27805 Loop time of 116.418 on 1 procs for 1000 steps with 4000 atoms Performance: 0.742 ns/day, 32.338 hours/ns, 8.590 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 115.45 | 115.45 | 115.45 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19341 | 0.19341 | 0.19341 | 0.0 | 0.17 Output | 0.00021936 | 0.00021936 | 0.00021936 | 0.0 | 0.00 Modify | 0.66898 | 0.66898 | 0.66898 | 0.0 | 0.57 Other | | 0.1016 | | | 0.09 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 395871.0 ave 395871 max 395871 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 395871 Ave neighs/atom = 98.967750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.055656655024, Press = -0.483443850185509 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -14892.043 -14892.043 -15066.006 -15066.006 336.5437 336.5437 68984.401 68984.401 299.27805 299.27805 26000 -14896.385 -14896.385 -15069.08 -15069.08 334.08898 334.08898 69067.51 69067.51 -2369.2535 -2369.2535 Loop time of 114.678 on 1 procs for 1000 steps with 4000 atoms Performance: 0.753 ns/day, 31.855 hours/ns, 8.720 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.71 | 113.71 | 113.71 | 0.0 | 99.16 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19352 | 0.19352 | 0.19352 | 0.0 | 0.17 Output | 0.00022414 | 0.00022414 | 0.00022414 | 0.0 | 0.00 Modify | 0.66828 | 0.66828 | 0.66828 | 0.0 | 0.58 Other | | 0.1015 | | | 0.09 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396119.0 ave 396119 max 396119 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396119 Ave neighs/atom = 99.029750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.032255743563, Press = -3.12179922323962 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 26000 -14896.385 -14896.385 -15069.08 -15069.08 334.08898 334.08898 69067.51 69067.51 -2369.2535 -2369.2535 27000 -14892.123 -14892.123 -15067.02 -15067.02 338.34972 338.34972 68892.664 68892.664 2465.9862 2465.9862 Loop time of 122.622 on 1 procs for 1000 steps with 4000 atoms Performance: 0.705 ns/day, 34.062 hours/ns, 8.155 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 121.62 | 121.62 | 121.62 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19934 | 0.19934 | 0.19934 | 0.0 | 0.16 Output | 0.00022323 | 0.00022323 | 0.00022323 | 0.0 | 0.00 Modify | 0.69673 | 0.69673 | 0.69673 | 0.0 | 0.57 Other | | 0.1013 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 395706.0 ave 395706 max 395706 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 395706 Ave neighs/atom = 98.926500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.0360865018, Press = -2.06677735960291 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 27000 -14892.123 -14892.123 -15067.02 -15067.02 338.34972 338.34972 68892.664 68892.664 2465.9862 2465.9862 28000 -14890.41 -14890.41 -15066.566 -15066.566 340.7844 340.7844 68962.151 68962.151 755.60512 755.60512 Loop time of 169.416 on 1 procs for 1000 steps with 4000 atoms Performance: 0.510 ns/day, 47.060 hours/ns, 5.903 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 168.23 | 168.23 | 168.23 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23096 | 0.23096 | 0.23096 | 0.0 | 0.14 Output | 0.00018359 | 0.00018359 | 0.00018359 | 0.0 | 0.00 Modify | 0.84552 | 0.84552 | 0.84552 | 0.0 | 0.50 Other | | 0.1051 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396410.0 ave 396410 max 396410 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396410 Ave neighs/atom = 99.102500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.060381929787, Press = -0.666429146836713 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 28000 -14890.41 -14890.41 -15066.566 -15066.566 340.7844 340.7844 68962.151 68962.151 755.60512 755.60512 29000 -14892.03 -14892.03 -15065.065 -15065.065 334.74822 334.74822 68965.501 68965.501 899.53997 899.53997 Loop time of 167.561 on 1 procs for 1000 steps with 4000 atoms Performance: 0.516 ns/day, 46.545 hours/ns, 5.968 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 166.38 | 166.38 | 166.38 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23242 | 0.23242 | 0.23242 | 0.0 | 0.14 Output | 0.0001856 | 0.0001856 | 0.0001856 | 0.0 | 0.00 Modify | 0.84447 | 0.84447 | 0.84447 | 0.0 | 0.50 Other | | 0.104 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396069.0 ave 396069 max 396069 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396069 Ave neighs/atom = 99.017250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.003699308241, Press = -2.68946002655275 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 29000 -14892.03 -14892.03 -15065.065 -15065.065 334.74822 334.74822 68965.501 68965.501 899.53997 899.53997 30000 -14895.277 -14895.277 -15065.215 -15065.215 328.75578 328.75578 68939.598 68939.598 1509.8167 1509.8167 Loop time of 173.728 on 1 procs for 1000 steps with 4000 atoms Performance: 0.497 ns/day, 48.258 hours/ns, 5.756 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 172.54 | 172.54 | 172.54 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23371 | 0.23371 | 0.23371 | 0.0 | 0.13 Output | 0.00022214 | 0.00022214 | 0.00022214 | 0.0 | 0.00 Modify | 0.84749 | 0.84749 | 0.84749 | 0.0 | 0.49 Other | | 0.1054 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 396058.0 ave 396058 max 396058 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 396058 Ave neighs/atom = 99.014500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T333.15.out" else "print 'not_converged' file output/vol_T333.15.out" print '${V}' file output/vol_T333.15.out 68991.7397640291 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0