# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.182049587368965*${_u_distance} variable latticeconst_converted equal 4.182049587368965*1 lattice fcc ${latticeconst_converted} lattice fcc 4.18204958736897 Lattice spacing in x,y,z = 4.18205 4.18205 4.18205 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (41.8205 41.8205 41.8205) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000345945 secs variable mass_converted equal 196.96655*${_u_mass} variable mass_converted equal 196.96655*1 # specify which KIM Model to use pair_style adp pair_coeff * * ./SM_985135773293_000-files/b'Si_Au.adp' Au mass 1 ${mass_converted} mass 1 196.96655 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 73142.1183177838 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 73142.1183177838/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 73142.1183177838/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 73142.1183177838/(1*1*${_u_distance}) variable V0_metal equal 73142.1183177838/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 73142.1183177838*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 73142.1183177838 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 273.15*${_u_temperature} variable temp_converted equal 273.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 273.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "273.15 - 0.2" variable T_up equal "273.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8.19615 ghost atom cutoff = 8.19615 binsize = 4.09807, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair adp, perpetual attributes: half, newton on pair build: half/bin/atomonly/newton stencil: half/bin/3d/newton bin: standard Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -15468.594 -15468.594 -15609.788 -15609.788 273.15 273.15 73142.118 73142.118 2061.8853 2061.8853 1000 -15317.941 -15317.941 -15461.018 -15461.018 276.79247 276.79247 75012.802 75012.802 -422.41784 -422.41784 Loop time of 26.3654 on 1 procs for 1000 steps with 4000 atoms Performance: 3.277 ns/day, 7.324 hours/ns, 37.929 timesteps/s 57.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.969 | 25.969 | 25.969 | 0.0 | 98.50 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.05907 | 0.05907 | 0.05907 | 0.0 | 0.22 Output | 4.1008e-05 | 4.1008e-05 | 4.1008e-05 | 0.0 | 0.00 Modify | 0.25749 | 0.25749 | 0.25749 | 0.0 | 0.98 Other | | 0.07976 | | | 0.30 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 268000 ave 268000 max 268000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 268000 Ave neighs/atom = 67 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -15317.941 -15317.941 -15461.018 -15461.018 276.79247 276.79247 75012.802 75012.802 -422.41784 -422.41784 2000 -15337.262 -15337.262 -15476.113 -15476.113 268.61734 268.61734 74882.848 74882.848 -647.18307 -647.18307 Loop time of 29.3488 on 1 procs for 1000 steps with 4000 atoms Performance: 2.944 ns/day, 8.152 hours/ns, 34.073 timesteps/s 54.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.918 | 28.918 | 28.918 | 0.0 | 98.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.093458 | 0.093458 | 0.093458 | 0.0 | 0.32 Output | 4.4107e-05 | 4.4107e-05 | 4.4107e-05 | 0.0 | 0.00 Modify | 0.298 | 0.298 | 0.298 | 0.0 | 1.02 Other | | 0.03979 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5889 ave 5889 max 5889 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 266471 ave 266471 max 266471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266471 Ave neighs/atom = 66.6178 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -15337.262 -15337.262 -15476.113 -15476.113 268.61734 268.61734 74882.848 74882.848 -647.18307 -647.18307 3000 -15321.004 -15321.004 -15467.867 -15467.867 284.11591 284.11591 74984.825 74984.825 -722.22413 -722.22413 Loop time of 25.7111 on 1 procs for 1000 steps with 4000 atoms Performance: 3.360 ns/day, 7.142 hours/ns, 38.894 timesteps/s 61.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.397 | 25.397 | 25.397 | 0.0 | 98.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.078865 | 0.078865 | 0.078865 | 0.0 | 0.31 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.19626 | 0.19626 | 0.19626 | 0.0 | 0.76 Other | | 0.03942 | | | 0.15 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5880 ave 5880 max 5880 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 267028 ave 267028 max 267028 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 267028 Ave neighs/atom = 66.757 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -15321.004 -15321.004 -15467.867 -15467.867 284.11591 284.11591 74984.825 74984.825 -722.22413 -722.22413 4000 -15333.22 -15333.22 -15473.945 -15473.945 272.24172 272.24172 74928.051 74928.051 -767.00789 -767.00789 Loop time of 26.1454 on 1 procs for 1000 steps with 4000 atoms Performance: 3.305 ns/day, 7.263 hours/ns, 38.248 timesteps/s 61.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.776 | 25.776 | 25.776 | 0.0 | 98.59 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038933 | 0.038933 | 0.038933 | 0.0 | 0.15 Output | 4.0054e-05 | 4.0054e-05 | 4.0054e-05 | 0.0 | 0.00 Modify | 0.27045 | 0.27045 | 0.27045 | 0.0 | 1.03 Other | | 0.0598 | | | 0.23 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5883 ave 5883 max 5883 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 266728 ave 266728 max 266728 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266728 Ave neighs/atom = 66.682 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -15333.22 -15333.22 -15473.945 -15473.945 272.24172 272.24172 74928.051 74928.051 -767.00789 -767.00789 5000 -15326.511 -15326.511 -15469.005 -15469.005 275.66588 275.66588 74888.301 74888.301 -35.732108 -35.732108 Loop time of 25.5069 on 1 procs for 1000 steps with 4000 atoms Performance: 3.387 ns/day, 7.085 hours/ns, 39.205 timesteps/s 64.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.208 | 25.208 | 25.208 | 0.0 | 98.83 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.040337 | 0.040337 | 0.040337 | 0.0 | 0.16 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.19898 | 0.19898 | 0.19898 | 0.0 | 0.78 Other | | 0.0597 | | | 0.23 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5865 ave 5865 max 5865 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 266945 ave 266945 max 266945 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266945 Ave neighs/atom = 66.7362 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 278.506886498819, Press = -0.886721821850336 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -15326.511 -15326.511 -15469.005 -15469.005 275.66588 275.66588 74888.301 74888.301 -35.732108 -35.732108 6000 -15329.538 -15329.538 -15472.367 -15472.367 276.31262 276.31262 74822.551 74822.551 312.17725 312.17725 Loop time of 25.7626 on 1 procs for 1000 steps with 4000 atoms Performance: 3.354 ns/day, 7.156 hours/ns, 38.816 timesteps/s 63.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.393 | 25.393 | 25.393 | 0.0 | 98.56 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059198 | 0.059198 | 0.059198 | 0.0 | 0.23 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.2911 | 0.2911 | 0.2911 | 0.0 | 1.13 Other | | 0.01949 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5869 ave 5869 max 5869 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 266843 ave 266843 max 266843 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266843 Ave neighs/atom = 66.7108 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.81724563113, Press = -7.36380910909242 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -15329.538 -15329.538 -15472.367 -15472.367 276.31262 276.31262 74822.551 74822.551 312.17725 312.17725 7000 -15330.423 -15330.423 -15471.705 -15471.705 273.31948 273.31948 74773.614 74773.614 752.69121 752.69121 Loop time of 25.7822 on 1 procs for 1000 steps with 4000 atoms Performance: 3.351 ns/day, 7.162 hours/ns, 38.786 timesteps/s 62.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.362 | 25.362 | 25.362 | 0.0 | 98.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059033 | 0.059033 | 0.059033 | 0.0 | 0.23 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.32138 | 0.32138 | 0.32138 | 0.0 | 1.25 Other | | 0.03956 | | | 0.15 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5883 ave 5883 max 5883 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 267054 ave 267054 max 267054 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 267054 Ave neighs/atom = 66.7635 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.082116800948, Press = 1.04634656919444 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -15330.423 -15330.423 -15471.705 -15471.705 273.31948 273.31948 74773.614 74773.614 752.69121 752.69121 8000 -15327.119 -15327.119 -15469.421 -15469.421 275.29335 275.29335 74818.748 74818.748 539.78563 539.78563 Loop time of 24.9903 on 1 procs for 1000 steps with 4000 atoms Performance: 3.457 ns/day, 6.942 hours/ns, 40.016 timesteps/s 64.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.631 | 24.631 | 24.631 | 0.0 | 98.56 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.078793 | 0.078793 | 0.078793 | 0.0 | 0.32 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.26075 | 0.26075 | 0.26075 | 0.0 | 1.04 Other | | 0.01939 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5879 ave 5879 max 5879 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 267119 ave 267119 max 267119 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 267119 Ave neighs/atom = 66.7798 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.221616536421, Press = 5.21108555864804 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -15327.119 -15327.119 -15469.421 -15469.421 275.29335 275.29335 74818.748 74818.748 539.78563 539.78563 9000 -15330.55 -15330.55 -15471.445 -15471.445 272.5709 272.5709 74805.869 74805.869 593.89511 593.89511 Loop time of 30.2077 on 1 procs for 1000 steps with 4000 atoms Performance: 2.860 ns/day, 8.391 hours/ns, 33.104 timesteps/s 53.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.725 | 29.725 | 29.725 | 0.0 | 98.40 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059432 | 0.059432 | 0.059432 | 0.0 | 0.20 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.38356 | 0.38356 | 0.38356 | 0.0 | 1.27 Other | | 0.03966 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5880 ave 5880 max 5880 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 266986 ave 266986 max 266986 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266986 Ave neighs/atom = 66.7465 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.443942972962, Press = 8.00835588805299 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -15330.55 -15330.55 -15471.445 -15471.445 272.5709 272.5709 74805.869 74805.869 593.89511 593.89511 10000 -15324.254 -15324.254 -15469.711 -15469.711 281.39652 281.39652 74920.63 74920.63 -350.03924 -350.03924 Loop time of 27.9427 on 1 procs for 1000 steps with 4000 atoms Performance: 3.092 ns/day, 7.762 hours/ns, 35.788 timesteps/s 58.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.66 | 27.66 | 27.66 | 0.0 | 98.99 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.039231 | 0.039231 | 0.039231 | 0.0 | 0.14 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.22374 | 0.22374 | 0.22374 | 0.0 | 0.80 Other | | 0.01972 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5869 ave 5869 max 5869 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 267134 ave 267134 max 267134 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 267134 Ave neighs/atom = 66.7835 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.541537191662, Press = 3.65738267516812 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -15324.254 -15324.254 -15469.711 -15469.711 281.39652 281.39652 74920.63 74920.63 -350.03924 -350.03924 11000 -15332.813 -15332.813 -15472.231 -15472.231 269.71402 269.71402 74907.965 74907.965 -505.45191 -505.45191 Loop time of 25.3146 on 1 procs for 1000 steps with 4000 atoms Performance: 3.413 ns/day, 7.032 hours/ns, 39.503 timesteps/s 64.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.992 | 24.992 | 24.992 | 0.0 | 98.72 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.039619 | 0.039619 | 0.039619 | 0.0 | 0.16 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.24248 | 0.24248 | 0.24248 | 0.0 | 0.96 Other | | 0.04092 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5884 ave 5884 max 5884 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 267010 ave 267010 max 267010 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 267010 Ave neighs/atom = 66.7525 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.56140455526, Press = -3.34666271365597 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -15332.813 -15332.813 -15472.231 -15472.231 269.71402 269.71402 74907.965 74907.965 -505.45191 -505.45191 12000 -15325.968 -15325.968 -15468.535 -15468.535 275.80544 275.80544 74995.065 74995.065 -749.71767 -749.71767 Loop time of 24.2948 on 1 procs for 1000 steps with 4000 atoms Performance: 3.556 ns/day, 6.749 hours/ns, 41.161 timesteps/s 66.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 23.928 | 23.928 | 23.928 | 0.0 | 98.49 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059285 | 0.059285 | 0.059285 | 0.0 | 0.24 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.2423 | 0.2423 | 0.2423 | 0.0 | 1.00 Other | | 0.06556 | | | 0.27 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5869 ave 5869 max 5869 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 267046 ave 267046 max 267046 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 267046 Ave neighs/atom = 66.7615 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.52921819505, Press = -5.2571078757481 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -15325.968 -15325.968 -15468.535 -15468.535 275.80544 275.80544 74995.065 74995.065 -749.71767 -749.71767 13000 -15329.691 -15329.691 -15470.355 -15470.355 272.12282 272.12282 74892.287 74892.287 -104.76374 -104.76374 Loop time of 27.767 on 1 procs for 1000 steps with 4000 atoms Performance: 3.112 ns/day, 7.713 hours/ns, 36.014 timesteps/s 58.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.385 | 27.385 | 27.385 | 0.0 | 98.62 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059353 | 0.059353 | 0.059353 | 0.0 | 0.21 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.28318 | 0.28318 | 0.28318 | 0.0 | 1.02 Other | | 0.03951 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5867 ave 5867 max 5867 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 266770 ave 266770 max 266770 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266770 Ave neighs/atom = 66.6925 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.486149274034, Press = -1.9748418938193 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -15329.691 -15329.691 -15470.355 -15470.355 272.12282 272.12282 74892.287 74892.287 -104.76374 -104.76374 14000 -15331.447 -15331.447 -15470.609 -15470.609 269.21945 269.21945 74854.701 74854.701 152.07065 152.07065 Loop time of 26.9339 on 1 procs for 1000 steps with 4000 atoms Performance: 3.208 ns/day, 7.482 hours/ns, 37.128 timesteps/s 60.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.64 | 26.64 | 26.64 | 0.0 | 98.91 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.039334 | 0.039334 | 0.039334 | 0.0 | 0.15 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.22269 | 0.22269 | 0.22269 | 0.0 | 0.83 Other | | 0.03226 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5870 ave 5870 max 5870 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 266908 ave 266908 max 266908 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266908 Ave neighs/atom = 66.727 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.280251204607, Press = -1.48310227608459 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -15331.447 -15331.447 -15470.609 -15470.609 269.21945 269.21945 74854.701 74854.701 152.07065 152.07065 15000 -15335.316 -15335.316 -15472.69 -15472.69 265.75926 265.75926 74846.579 74846.579 6.4681245 6.4681245 Loop time of 24.9622 on 1 procs for 1000 steps with 4000 atoms Performance: 3.461 ns/day, 6.934 hours/ns, 40.061 timesteps/s 64.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.618 | 24.618 | 24.618 | 0.0 | 98.62 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.060272 | 0.060272 | 0.060272 | 0.0 | 0.24 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.26428 | 0.26428 | 0.26428 | 0.0 | 1.06 Other | | 0.01952 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5868 ave 5868 max 5868 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 266949 ave 266949 max 266949 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266949 Ave neighs/atom = 66.7373 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.331158654219, Press = -1.31254480584888 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -15335.316 -15335.316 -15472.69 -15472.69 265.75926 265.75926 74846.579 74846.579 6.4681245 6.4681245 16000 -15328.289 -15328.289 -15470.346 -15470.346 274.81918 274.81918 74911.201 74911.201 -446.75669 -446.75669 Loop time of 24.2085 on 1 procs for 1000 steps with 4000 atoms Performance: 3.569 ns/day, 6.725 hours/ns, 41.308 timesteps/s 67.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 23.827 | 23.827 | 23.827 | 0.0 | 98.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059069 | 0.059069 | 0.059069 | 0.0 | 0.24 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.30299 | 0.30299 | 0.30299 | 0.0 | 1.25 Other | | 0.01965 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5883 ave 5883 max 5883 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 267191 ave 267191 max 267191 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 267191 Ave neighs/atom = 66.7977 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.396015288929, Press = -0.801190239477576 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -15328.289 -15328.289 -15470.346 -15470.346 274.81918 274.81918 74911.201 74911.201 -446.75669 -446.75669 17000 -15330.497 -15330.497 -15472.061 -15472.061 273.86425 273.86425 74966.124 74966.124 -1022.1006 -1022.1006 Loop time of 26.9055 on 1 procs for 1000 steps with 4000 atoms Performance: 3.211 ns/day, 7.474 hours/ns, 37.167 timesteps/s 60.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.523 | 26.523 | 26.523 | 0.0 | 98.58 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079276 | 0.079276 | 0.079276 | 0.0 | 0.29 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.2232 | 0.2232 | 0.2232 | 0.0 | 0.83 Other | | 0.07975 | | | 0.30 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5864 ave 5864 max 5864 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 267019 ave 267019 max 267019 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 267019 Ave neighs/atom = 66.7548 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.477447399954, Press = 1.43653599325047 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -15330.497 -15330.497 -15472.061 -15472.061 273.86425 273.86425 74966.124 74966.124 -1022.1006 -1022.1006 18000 -15326.958 -15326.958 -15468.608 -15468.608 274.03067 274.03067 74978.581 74978.581 -790.94281 -790.94281 Loop time of 31.0438 on 1 procs for 1000 steps with 4000 atoms Performance: 2.783 ns/day, 8.623 hours/ns, 32.213 timesteps/s 52.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.44 | 30.44 | 30.44 | 0.0 | 98.05 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059474 | 0.059474 | 0.059474 | 0.0 | 0.19 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.48484 | 0.48484 | 0.48484 | 0.0 | 1.56 Other | | 0.05965 | | | 0.19 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5862 ave 5862 max 5862 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 266937 ave 266937 max 266937 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266937 Ave neighs/atom = 66.7343 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.433409419318, Press = 0.511598968611486 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -15326.958 -15326.958 -15468.608 -15468.608 274.03067 274.03067 74978.581 74978.581 -790.94281 -790.94281 19000 -15331.976 -15331.976 -15471.525 -15471.525 269.96652 269.96652 74866.051 74866.051 -45.229351 -45.229351 Loop time of 30.9703 on 1 procs for 1000 steps with 4000 atoms Performance: 2.790 ns/day, 8.603 hours/ns, 32.289 timesteps/s 52.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.669 | 30.669 | 30.669 | 0.0 | 99.03 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.039286 | 0.039286 | 0.039286 | 0.0 | 0.13 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.24268 | 0.24268 | 0.24268 | 0.0 | 0.78 Other | | 0.0197 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5865 ave 5865 max 5865 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 266832 ave 266832 max 266832 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266832 Ave neighs/atom = 66.708 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.46264401549, Press = -2.35072249612856 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -15331.976 -15331.976 -15471.525 -15471.525 269.96652 269.96652 74866.051 74866.051 -45.229351 -45.229351 20000 -15330.329 -15330.329 -15469.179 -15469.179 268.61446 268.61446 74853.227 74853.227 254.67053 254.67053 Loop time of 31.4121 on 1 procs for 1000 steps with 4000 atoms Performance: 2.751 ns/day, 8.726 hours/ns, 31.835 timesteps/s 51.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.899 | 30.899 | 30.899 | 0.0 | 98.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079462 | 0.079462 | 0.079462 | 0.0 | 0.25 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.41352 | 0.41352 | 0.41352 | 0.0 | 1.32 Other | | 0.01989 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5886 ave 5886 max 5886 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 267067 ave 267067 max 267067 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 267067 Ave neighs/atom = 66.7668 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.456107176632, Press = -1.20572145052676 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -15330.329 -15330.329 -15469.179 -15469.179 268.61446 268.61446 74853.227 74853.227 254.67053 254.67053 21000 -15330.97 -15330.97 -15470.627 -15470.627 270.17579 270.17579 74879.806 74879.806 -188.83362 -188.83362 Loop time of 29.3037 on 1 procs for 1000 steps with 4000 atoms Performance: 2.948 ns/day, 8.140 hours/ns, 34.125 timesteps/s 55.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.902 | 28.902 | 28.902 | 0.0 | 98.63 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059631 | 0.059631 | 0.059631 | 0.0 | 0.20 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.30252 | 0.30252 | 0.30252 | 0.0 | 1.03 Other | | 0.03959 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5876 ave 5876 max 5876 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 266947 ave 266947 max 266947 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266947 Ave neighs/atom = 66.7368 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.457729095891, Press = -0.176271078445242 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -15330.97 -15330.97 -15470.627 -15470.627 270.17579 270.17579 74879.806 74879.806 -188.83362 -188.83362 22000 -15328.811 -15328.811 -15469.48 -15469.48 272.13296 272.13296 74854.045 74854.045 260.65713 260.65713 Loop time of 28.8711 on 1 procs for 1000 steps with 4000 atoms Performance: 2.993 ns/day, 8.020 hours/ns, 34.637 timesteps/s 55.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.513 | 28.513 | 28.513 | 0.0 | 98.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038773 | 0.038773 | 0.038773 | 0.0 | 0.13 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.29963 | 0.29963 | 0.29963 | 0.0 | 1.04 Other | | 0.01923 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5866 ave 5866 max 5866 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 267042 ave 267042 max 267042 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 267042 Ave neighs/atom = 66.7605 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.413939680433, Press = -1.21715239700899 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -15328.811 -15328.811 -15469.48 -15469.48 272.13296 272.13296 74854.045 74854.045 260.65713 260.65713 23000 -15324.744 -15324.744 -15468.763 -15468.763 278.61419 278.61419 74883.572 74883.572 149.17024 149.17024 Loop time of 31.2059 on 1 procs for 1000 steps with 4000 atoms Performance: 2.769 ns/day, 8.668 hours/ns, 32.045 timesteps/s 51.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.884 | 30.884 | 30.884 | 0.0 | 98.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079616 | 0.079616 | 0.079616 | 0.0 | 0.26 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.2222 | 0.2222 | 0.2222 | 0.0 | 0.71 Other | | 0.01964 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5877 ave 5877 max 5877 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 267050 ave 267050 max 267050 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 267050 Ave neighs/atom = 66.7625 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.433720356513, Press = -0.585315719719136 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -15324.744 -15324.744 -15468.763 -15468.763 278.61419 278.61419 74883.572 74883.572 149.17024 149.17024 24000 -15328.569 -15328.569 -15473.839 -15473.839 281.03436 281.03436 74771.95 74771.95 864.24662 864.24662 Loop time of 27.5628 on 1 procs for 1000 steps with 4000 atoms Performance: 3.135 ns/day, 7.656 hours/ns, 36.281 timesteps/s 58.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.16 | 27.16 | 27.16 | 0.0 | 98.54 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13932 | 0.13932 | 0.13932 | 0.0 | 0.51 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.24387 | 0.24387 | 0.24387 | 0.0 | 0.88 Other | | 0.01966 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5865 ave 5865 max 5865 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 266851 ave 266851 max 266851 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266851 Ave neighs/atom = 66.7127 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.455985094567, Press = -1.0222227227613 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -15328.569 -15328.569 -15473.839 -15473.839 281.03436 281.03436 74771.95 74771.95 864.24662 864.24662 25000 -15330.303 -15330.303 -15468.798 -15468.798 267.92802 267.92802 74862.773 74862.773 211.13246 211.13246 Loop time of 26.9529 on 1 procs for 1000 steps with 4000 atoms Performance: 3.206 ns/day, 7.487 hours/ns, 37.102 timesteps/s 59.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.573 | 26.573 | 26.573 | 0.0 | 98.59 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.039642 | 0.039642 | 0.039642 | 0.0 | 0.15 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.28115 | 0.28115 | 0.28115 | 0.0 | 1.04 Other | | 0.0593 | | | 0.22 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5886 ave 5886 max 5886 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 267133 ave 267133 max 267133 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 267133 Ave neighs/atom = 66.7832 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.387156879675, Press = -0.0792532904330307 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.858 | 6.858 | 6.858 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -15330.303 -15330.303 -15468.798 -15468.798 267.92802 267.92802 74862.773 74862.773 211.13246 211.13246 26000 -15333.477 -15333.477 -15470.636 -15470.636 265.3424 265.3424 74867.372 74867.372 24.131949 24.131949 Loop time of 34.8811 on 1 procs for 1000 steps with 4000 atoms Performance: 2.477 ns/day, 9.689 hours/ns, 28.669 timesteps/s 46.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 34.378 | 34.378 | 34.378 | 0.0 | 98.56 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.039467 | 0.039467 | 0.039467 | 0.0 | 0.11 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.42396 | 0.42396 | 0.42396 | 0.0 | 1.22 Other | | 0.03943 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5869 ave 5869 max 5869 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 266953 ave 266953 max 266953 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266953 Ave neighs/atom = 66.7382 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T273.15.out" else "print 'not_converged' file output/vol_T273.15.out" print '${V}' file output/vol_T273.15.out 74875.7885790205 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0