AttributeError: module 'posixpath' has no attribute 'exits' Traceback (most recent call last): File "/usr/local/bin/run_openkim_job.py", line 552, in execute_in_place(runner, runner_driver, subject, subject_driver, env) File "/usr/local/bin/run_openkim_job.py", line 396, in execute_in_place if os.path.exits(KIM_TOOLS_LOG_FILE): AttributeError: module 'posixpath' has no attribute 'exits' output/pipeline.stdout: ----------------------- ============================================================================================================================================================ Finished with optimization============================================================================================================================================================ Final lattice Constants: a = [2.91042425] Angstroms, c = [4.7527029] Angstroms, c/a = 1.632993 Total energy: -31.68581277070145 eV Cohesive energy: -7.921453192675362 eV/atom============================================================================================================================================================ output/pipeline.stderr: ----------------------- /anvil/scratch/x-bwaters/jobs/jobs/ddb762bb-98aa-4cbf-8d12-d2143715d1c1-007/TE_272523306576_005-and-MO_645806019892_001-1752172512/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Ta__TE_272523306576_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:181: FutureWarning: Please use atoms.calc = calc atoms.set_calculator(calc)/anvil/scratch/x-bwaters/jobs/jobs/ddb762bb-98aa-4cbf-8d12-d2143715d1c1-007/TE_272523306576_005-and-MO_645806019892_001-1752172512/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Ta__TE_272523306576_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:334: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) for init_guess_c in np.arange(/anvil/scratch/x-bwaters/jobs/jobs/ddb762bb-98aa-4cbf-8d12-d2143715d1c1-007/TE_272523306576_005-and-MO_645806019892_001-1752172512/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Ta__TE_272523306576_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:134: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) return math.sqrt(hrDist * hrDist + vDist * vDist)/anvil/scratch/x-bwaters/jobs/jobs/ddb762bb-98aa-4cbf-8d12-d2143715d1c1-007/TE_272523306576_005-and-MO_645806019892_001-1752172512/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Ta__TE_272523306576_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:420: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) float(minLatticeConstants[1] / minLatticeConstants[0]),/anvil/scratch/x-bwaters/jobs/jobs/ddb762bb-98aa-4cbf-8d12-d2143715d1c1-007/TE_272523306576_005-and-MO_645806019892_001-1752172512/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Ta__TE_272523306576_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:429: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) float(minLatticeConstants[0]),/anvil/scratch/x-bwaters/jobs/jobs/ddb762bb-98aa-4cbf-8d12-d2143715d1c1-007/TE_272523306576_005-and-MO_645806019892_001-1752172512/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Ta__TE_272523306576_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:430: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) float(minLatticeConstants[1]),{"realtime":6.56,"usertime":8.12,"systime":10.92,"memmax":162412,"memavg":0} output/kim.log: --------------- 2025-07-10:14:37:12EDT * 2 * information * 0x560ea9779750_0x560ea977a760 * KIM_LogImplementation.cpp:243 * Log object renamed. ID changed from '0x560ea977a760'.2025-07-10:14:37:12EDT * 3 * information * 0x560ea9779750_0x560ea977a760 * EAM_Implementation.cpp:1562 * Register argument supportStatus2025-07-10:14:37:12EDT * 4 * information * 0x560ea9779750_0x560ea977a760 * EAM_Implementation.cpp:1581 * Register callback supportStatus2025-07-10:14:37:12EDT * 5 * information * 0x560ea9764fe0_0x560ea9765410 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-10:14:37:12EDT * 1 * information * 0x560ea9764fe0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-10:14:37:12EDT * 5 * information * 0x560ea97654c0_0x560ea9766fc0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-10:14:37:12EDT * 2 * information * 0x560ea97654c0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-10:14:37:12EDT * 5 * information * 0x560ea976aa10_0x560ea976b7d0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-10:14:37:12EDT * 2 * information * 0x560ea976aa10 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-10:14:37:12EDT * 5 * information * 0x560ea976d150_0x560ea976e230 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-10:14:37:12EDT * 2 * information * 0x560ea976d150 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-10:14:37:12EDT * 5 * information * 0x560ea976ff60_0x560ea9770f70 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-10:14:37:12EDT * 2 * information * 0x560ea976ff60 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-10:14:37:12EDT * 5 * information * 0x560ea9772c40_0x560ea9773e20 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-10:14:37:12EDT * 2 * information * 0x560ea9772c40 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-10:14:37:12EDT * 5 * information * 0x560ea9775a50_0x560ea9776c00 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-10:14:37:12EDT * 2 * information * 0x560ea9775a50 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-10:14:37:12EDT * 2 * warning * 0x560ea9779750 * EAM_Implementation.hpp:475 * Particles has density value outside of embedding function interpolation domain, but as LAMMPS equivalence was requested, ignoring2025-07-10:14:37:17EDT * 0 * information * 0x560ea9779750_0x560ea977a760 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-10:14:37:17EDT * 0 * information * 0x560ea9779750 * KIM_LogImplementation.cpp:119 * Log object destroyed. output/kim-tools.log: ---------------------