AttributeError: module 'posixpath' has no attribute 'exits' Traceback (most recent call last): File "/usr/local/bin/run_openkim_job.py", line 552, in execute_in_place(runner, runner_driver, subject, subject_driver, env) File "/usr/local/bin/run_openkim_job.py", line 396, in execute_in_place if os.path.exits(KIM_TOOLS_LOG_FILE): AttributeError: module 'posixpath' has no attribute 'exits' output/pipeline.stdout: ----------------------- ============================================================================================================================================================ Finished with optimization============================================================================================================================================================ Final lattice Constants: a = [2.96316882] Angstroms, c = [4.83883442] Angstroms, c/a = 1.632993 Total energy: -31.845758387123986 eV Cohesive energy: -7.9614395967809966 eV/atom============================================================================================================================================================ output/pipeline.stderr: ----------------------- /anvil/scratch/x-bwaters/jobs/jobs/13e6d9d4-a552-45c3-905d-b068bfa5d120-007/TE_272523306576_005-and-MO_816821594689_001-1752090361/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Ta__TE_272523306576_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:181: FutureWarning: Please use atoms.calc = calc atoms.set_calculator(calc)/anvil/scratch/x-bwaters/jobs/jobs/13e6d9d4-a552-45c3-905d-b068bfa5d120-007/TE_272523306576_005-and-MO_816821594689_001-1752090361/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Ta__TE_272523306576_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:334: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) for init_guess_c in np.arange(/anvil/scratch/x-bwaters/jobs/jobs/13e6d9d4-a552-45c3-905d-b068bfa5d120-007/TE_272523306576_005-and-MO_816821594689_001-1752090361/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Ta__TE_272523306576_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:134: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) return math.sqrt(hrDist * hrDist + vDist * vDist)/anvil/scratch/x-bwaters/jobs/jobs/13e6d9d4-a552-45c3-905d-b068bfa5d120-007/TE_272523306576_005-and-MO_816821594689_001-1752090361/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Ta__TE_272523306576_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:420: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) float(minLatticeConstants[1] / minLatticeConstants[0]),/anvil/scratch/x-bwaters/jobs/jobs/13e6d9d4-a552-45c3-905d-b068bfa5d120-007/TE_272523306576_005-and-MO_816821594689_001-1752090361/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Ta__TE_272523306576_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:429: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) float(minLatticeConstants[0]),/anvil/scratch/x-bwaters/jobs/jobs/13e6d9d4-a552-45c3-905d-b068bfa5d120-007/TE_272523306576_005-and-MO_816821594689_001-1752090361/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Ta__TE_272523306576_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:430: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) float(minLatticeConstants[1]),{"realtime":4.09,"usertime":4.10,"systime":4.82,"memmax":105368,"memavg":0} output/kim.log: --------------- 2025-07-09:15:49:29EDT * 2 * information * 0x55894d609be0_0x55894d33c210 * KIM_LogImplementation.cpp:243 * Log object renamed. ID changed from '0x55894d33c210'.2025-07-09:15:49:29EDT * 3 * information * 0x55894d609be0_0x55894d33c210 * EAM_Implementation.cpp:1562 * Register argument supportStatus2025-07-09:15:49:29EDT * 4 * information * 0x55894d609be0_0x55894d33c210 * EAM_Implementation.cpp:1581 * Register callback supportStatus2025-07-09:15:49:30EDT * 0 * information * 0x55894cd9be00_0x55894cd9cc50 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:15:49:30EDT * 0 * information * 0x55894cd9be00 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:15:49:30EDT * 0 * information * 0x55894cd9cdb0_0x55894cd9c800 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:15:49:30EDT * 0 * information * 0x55894cd9cdb0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:15:49:30EDT * 0 * information * 0x55894cdb5d40_0x55894cd9cd00 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:15:49:30EDT * 0 * information * 0x55894cdb5d40 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:15:49:30EDT * 0 * information * 0x55894cdb8890_0x55894cd9e9c0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:15:49:30EDT * 0 * information * 0x55894cdb8890 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:15:49:30EDT * 0 * information * 0x55894cdbb210_0x55894cdb6b90 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:15:49:30EDT * 0 * information * 0x55894cdbb210 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:15:49:30EDT * 0 * information * 0x55894d33b200_0x55894cdb9aa0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:15:49:30EDT * 0 * information * 0x55894d33b200 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:15:49:30EDT * 0 * information * 0x55894d4a2080_0x55894d1d53f0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:15:49:30EDT * 0 * information * 0x55894d4a2080 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:15:49:30EDT * 0 * warning * 0x55894d609be0 * EAM_Implementation.hpp:475 * Particles has density value outside of embedding function interpolation domain, but as LAMMPS equivalence was requested, ignoring2025-07-09:15:49:32EDT * 0 * information * 0x55894d609be0_0x55894d33c210 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:15:49:32EDT * 0 * information * 0x55894d609be0 * KIM_LogImplementation.cpp:119 * Log object destroyed. output/kim-tools.log: ---------------------