# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.4687884375453*${_u_distance} variable latticeconst_converted equal 4.4687884375453*1 lattice bcc ${latticeconst_converted} lattice bcc 4.4687884375453 Lattice spacing in x,y,z = 4.46879 4.46879 4.46879 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (44.6879 44.6879 44.6879) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms create_atoms CPU = 0.000319004 secs variable mass_converted equal 39.0983*${_u_mass} variable mass_converted equal 39.0983*1 # specify which KIM Model to use pair_style kim LJ_ElliottAkerson_2015_Universal__MO_959249795837_003 pair_coeff * * K mass 1 ${mass_converted} mass 1 39.0983 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 89242.0183577871 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 89242.0183577871/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 89242.0183577871/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 89242.0183577871/(1*1*${_u_distance}) variable V0_metal equal 89242.0183577871/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 89242.0183577871*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 89242.0183577871 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 20.5307 ghost atom cutoff = 20.5307 binsize = 10.2653, bins = 5 5 5 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 20.5307 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -8703.6544 -8703.6544 -8784.5696 -8784.5696 313.15 313.15 89242.018 89242.018 968.43437 968.43437 1000 -8730.6729 -8730.6729 -8820.9064 -8820.9064 349.21279 349.21279 89271.695 89271.695 1207.4901 1207.4901 Loop time of 25.3265 on 1 procs for 1000 steps with 2000 atoms Performance: 3.411 ns/day, 7.035 hours/ns, 39.484 timesteps/s 43.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.69 | 24.69 | 24.69 | 0.0 | 97.49 Neigh | 0.28197 | 0.28197 | 0.28197 | 0.0 | 1.11 Comm | 0.15161 | 0.15161 | 0.15161 | 0.0 | 0.60 Output | 4.1008e-05 | 4.1008e-05 | 4.1008e-05 | 0.0 | 0.00 Modify | 0.18677 | 0.18677 | 0.18677 | 0.0 | 0.74 Other | | 0.01593 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12511 ave 12511 max 12511 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63783e+06 ave 1.63783e+06 max 1.63783e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1637826 Ave neighs/atom = 818.913 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -8730.6729 -8730.6729 -8820.9064 -8820.9064 349.21279 349.21279 89271.695 89271.695 1207.4901 1207.4901 2000 -8791.3881 -8791.3881 -8874.4356 -8874.4356 321.40207 321.40207 89101.96 89101.96 -148.86635 -148.86635 Loop time of 24.96 on 1 procs for 1000 steps with 2000 atoms Performance: 3.462 ns/day, 6.933 hours/ns, 40.064 timesteps/s 44.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.082 | 24.082 | 24.082 | 0.0 | 96.48 Neigh | 0.50492 | 0.50492 | 0.50492 | 0.0 | 2.02 Comm | 0.18983 | 0.18983 | 0.18983 | 0.0 | 0.76 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.14777 | 0.14777 | 0.14777 | 0.0 | 0.59 Other | | 0.03574 | | | 0.14 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12163 ave 12163 max 12163 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63751e+06 ave 1.63751e+06 max 1.63751e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1637514 Ave neighs/atom = 818.757 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -8791.3881 -8791.3881 -8874.4356 -8874.4356 321.40207 321.40207 89101.96 89101.96 -148.86635 -148.86635 3000 -8808.5339 -8808.5339 -8889.337 -8889.337 312.7163 312.7163 88964.395 88964.395 588.26807 588.26807 Loop time of 25.4368 on 1 procs for 1000 steps with 2000 atoms Performance: 3.397 ns/day, 7.066 hours/ns, 39.313 timesteps/s 42.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.835 | 24.835 | 24.835 | 0.0 | 97.63 Neigh | 0.29136 | 0.29136 | 0.29136 | 0.0 | 1.15 Comm | 0.12777 | 0.12777 | 0.12777 | 0.0 | 0.50 Output | 3.7909e-05 | 3.7909e-05 | 3.7909e-05 | 0.0 | 0.00 Modify | 0.14682 | 0.14682 | 0.14682 | 0.0 | 0.58 Other | | 0.03571 | | | 0.14 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12113 ave 12113 max 12113 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63573e+06 ave 1.63573e+06 max 1.63573e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1635734 Ave neighs/atom = 817.867 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -8808.5339 -8808.5339 -8889.337 -8889.337 312.7163 312.7163 88964.395 88964.395 588.26807 588.26807 4000 -8814.3174 -8814.3174 -8900.823 -8900.823 334.78559 334.78559 88924.757 88924.757 253.73362 253.73362 Loop time of 23.5944 on 1 procs for 1000 steps with 2000 atoms Performance: 3.662 ns/day, 6.554 hours/ns, 42.383 timesteps/s 45.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 23.096 | 23.096 | 23.096 | 0.0 | 97.89 Neigh | 0.18701 | 0.18701 | 0.18701 | 0.0 | 0.79 Comm | 0.14782 | 0.14782 | 0.14782 | 0.0 | 0.63 Output | 3.9101e-05 | 3.9101e-05 | 3.9101e-05 | 0.0 | 0.00 Modify | 0.14745 | 0.14745 | 0.14745 | 0.0 | 0.62 Other | | 0.01593 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12095 ave 12095 max 12095 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63693e+06 ave 1.63693e+06 max 1.63693e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1636926 Ave neighs/atom = 818.463 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -8814.3174 -8814.3174 -8900.823 -8900.823 334.78559 334.78559 88924.757 88924.757 253.73362 253.73362 5000 -8821.3853 -8821.3853 -8900.5359 -8900.5359 306.3212 306.3212 88850.121 88850.121 1088.9377 1088.9377 Loop time of 24.7977 on 1 procs for 1000 steps with 2000 atoms Performance: 3.484 ns/day, 6.888 hours/ns, 40.326 timesteps/s 43.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.506 | 24.506 | 24.506 | 0.0 | 98.83 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16739 | 0.16739 | 0.16739 | 0.0 | 0.68 Output | 2.2173e-05 | 2.2173e-05 | 2.2173e-05 | 0.0 | 0.00 Modify | 0.10814 | 0.10814 | 0.10814 | 0.0 | 0.44 Other | | 0.01582 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12105 ave 12105 max 12105 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63461e+06 ave 1.63461e+06 max 1.63461e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1634610 Ave neighs/atom = 817.305 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.092448751927, Press = -13.8769426982253 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -8821.3853 -8821.3853 -8900.5359 -8900.5359 306.3212 306.3212 88850.121 88850.121 1088.9377 1088.9377 6000 -8817.9569 -8817.9569 -8900.3543 -8900.3543 318.88655 318.88655 88895.376 88895.376 668.53486 668.53486 Loop time of 24.4855 on 1 procs for 1000 steps with 2000 atoms Performance: 3.529 ns/day, 6.802 hours/ns, 40.840 timesteps/s 43.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.159 | 24.159 | 24.159 | 0.0 | 98.67 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1281 | 0.1281 | 0.1281 | 0.0 | 0.52 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.18275 | 0.18275 | 0.18275 | 0.0 | 0.75 Other | | 0.01575 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12123 ave 12123 max 12123 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63753e+06 ave 1.63753e+06 max 1.63753e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1637528 Ave neighs/atom = 818.764 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 314.045750188125, Press = -3.27467728702735 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -8817.9569 -8817.9569 -8900.3543 -8900.3543 318.88655 318.88655 88895.376 88895.376 668.53486 668.53486 7000 -8821.5355 -8821.5355 -8902.4888 -8902.4888 313.29769 313.29769 88895.797 88895.797 530.83924 530.83924 Loop time of 24.2872 on 1 procs for 1000 steps with 2000 atoms Performance: 3.557 ns/day, 6.746 hours/ns, 41.174 timesteps/s 44.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 23.893 | 23.893 | 23.893 | 0.0 | 98.38 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14741 | 0.14741 | 0.14741 | 0.0 | 0.61 Output | 2.2173e-05 | 2.2173e-05 | 2.2173e-05 | 0.0 | 0.00 Modify | 0.23093 | 0.23093 | 0.23093 | 0.0 | 0.95 Other | | 0.01596 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12125 ave 12125 max 12125 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63649e+06 ave 1.63649e+06 max 1.63649e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1636490 Ave neighs/atom = 818.245 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.845743290571, Press = 0.606185065288202 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -8821.5355 -8821.5355 -8902.4888 -8902.4888 313.29769 313.29769 88895.797 88895.797 530.83924 530.83924 8000 -8818.3594 -8818.3594 -8900.2085 -8900.2085 316.76422 316.76422 88920.207 88920.207 351.20867 351.20867 Loop time of 25.0253 on 1 procs for 1000 steps with 2000 atoms Performance: 3.453 ns/day, 6.951 hours/ns, 39.960 timesteps/s 42.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.602 | 24.602 | 24.602 | 0.0 | 98.31 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24705 | 0.24705 | 0.24705 | 0.0 | 0.99 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.16039 | 0.16039 | 0.16039 | 0.0 | 0.64 Other | | 0.01586 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12109 ave 12109 max 12109 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63646e+06 ave 1.63646e+06 max 1.63646e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1636462 Ave neighs/atom = 818.231 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.808968324439, Press = -2.02157487253297 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -8818.3594 -8818.3594 -8900.2085 -8900.2085 316.76422 316.76422 88920.207 88920.207 351.20867 351.20867 9000 -8820.911 -8820.911 -8898.9269 -8898.9269 301.92975 301.92975 88892.396 88892.396 640.12653 640.12653 Loop time of 25.249 on 1 procs for 1000 steps with 2000 atoms Performance: 3.422 ns/day, 7.014 hours/ns, 39.606 timesteps/s 42.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.805 | 24.805 | 24.805 | 0.0 | 98.24 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2276 | 0.2276 | 0.2276 | 0.0 | 0.90 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.2009 | 0.2009 | 0.2009 | 0.0 | 0.80 Other | | 0.01595 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12125 ave 12125 max 12125 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63554e+06 ave 1.63554e+06 max 1.63554e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1635538 Ave neighs/atom = 817.769 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.60650965082, Press = -2.10325849585972 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -8820.911 -8820.911 -8898.9269 -8898.9269 301.92975 301.92975 88892.396 88892.396 640.12653 640.12653 10000 -8819.678 -8819.678 -8901.2329 -8901.2329 315.62589 315.62589 88905.001 88905.001 385.61087 385.61087 Loop time of 24.5921 on 1 procs for 1000 steps with 2000 atoms Performance: 3.513 ns/day, 6.831 hours/ns, 40.663 timesteps/s 43.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.167 | 24.167 | 24.167 | 0.0 | 98.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14778 | 0.14778 | 0.14778 | 0.0 | 0.60 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.22117 | 0.22117 | 0.22117 | 0.0 | 0.90 Other | | 0.05599 | | | 0.23 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12113 ave 12113 max 12113 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63696e+06 ave 1.63696e+06 max 1.63696e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1636956 Ave neighs/atom = 818.478 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.732290791912, Press = -3.77033213715064 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -8819.678 -8819.678 -8901.2329 -8901.2329 315.62589 315.62589 88905.001 88905.001 385.61087 385.61087 11000 -8816.0341 -8816.0341 -8900.3629 -8900.3629 326.36096 326.36096 88896.939 88896.939 625.79457 625.79457 Loop time of 23.8597 on 1 procs for 1000 steps with 2000 atoms Performance: 3.621 ns/day, 6.628 hours/ns, 41.912 timesteps/s 44.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 23.453 | 23.453 | 23.453 | 0.0 | 98.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15119 | 0.15119 | 0.15119 | 0.0 | 0.63 Output | 4.0054e-05 | 4.0054e-05 | 4.0054e-05 | 0.0 | 0.00 Modify | 0.20006 | 0.20006 | 0.20006 | 0.0 | 0.84 Other | | 0.05576 | | | 0.23 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12107 ave 12107 max 12107 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63601e+06 ave 1.63601e+06 max 1.63601e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1636010 Ave neighs/atom = 818.005 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.936631479178, Press = -2.16746300897106 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -8816.0341 -8816.0341 -8900.3629 -8900.3629 326.36096 326.36096 88896.939 88896.939 625.79457 625.79457 12000 -8820.6761 -8820.6761 -8900.7037 -8900.7037 309.715 309.715 88927.486 88927.486 93.047246 93.047246 Loop time of 24.0281 on 1 procs for 1000 steps with 2000 atoms Performance: 3.596 ns/day, 6.674 hours/ns, 41.618 timesteps/s 44.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 23.515 | 23.515 | 23.515 | 0.0 | 97.87 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19703 | 0.19703 | 0.19703 | 0.0 | 0.82 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.27996 | 0.27996 | 0.27996 | 0.0 | 1.17 Other | | 0.03569 | | | 0.15 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12101 ave 12101 max 12101 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63691e+06 ave 1.63691e+06 max 1.63691e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1636910 Ave neighs/atom = 818.455 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.254864206647, Press = -0.564809435092449 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -8820.6761 -8820.6761 -8900.7037 -8900.7037 309.715 309.715 88927.486 88927.486 93.047246 93.047246 13000 -8817.2597 -8817.2597 -8899.9718 -8899.9718 320.10437 320.10437 88937.339 88937.339 26.241002 26.241002 Loop time of 24.5753 on 1 procs for 1000 steps with 2000 atoms Performance: 3.516 ns/day, 6.826 hours/ns, 40.691 timesteps/s 43.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.321 | 24.321 | 24.321 | 0.0 | 98.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10723 | 0.10723 | 0.10723 | 0.0 | 0.44 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.13103 | 0.13103 | 0.13103 | 0.0 | 0.53 Other | | 0.01584 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12101 ave 12101 max 12101 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63578e+06 ave 1.63578e+06 max 1.63578e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1635780 Ave neighs/atom = 817.89 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.51645967996, Press = 0.840451146096574 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -8817.2597 -8817.2597 -8899.9718 -8899.9718 320.10437 320.10437 88937.339 88937.339 26.241002 26.241002 14000 -8824.4128 -8824.4128 -8901.998 -8901.998 300.26283 300.26283 88965.205 88965.205 -601.12134 -601.12134 Loop time of 24.1529 on 1 procs for 1000 steps with 2000 atoms Performance: 3.577 ns/day, 6.709 hours/ns, 41.403 timesteps/s 44.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 23.77 | 23.77 | 23.77 | 0.0 | 98.41 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20676 | 0.20676 | 0.20676 | 0.0 | 0.86 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.14087 | 0.14087 | 0.14087 | 0.0 | 0.58 Other | | 0.03558 | | | 0.15 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12081 ave 12081 max 12081 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63544e+06 ave 1.63544e+06 max 1.63544e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1635440 Ave neighs/atom = 817.72 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.405038372045, Press = 0.416050332457517 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -8824.4128 -8824.4128 -8901.998 -8901.998 300.26283 300.26283 88965.205 88965.205 -601.12134 -601.12134 15000 -8818.9427 -8818.9427 -8899.7376 -8899.7376 312.68466 312.68466 88927.714 88927.714 189.44101 189.44101 Loop time of 23.1316 on 1 procs for 1000 steps with 2000 atoms Performance: 3.735 ns/day, 6.425 hours/ns, 43.231 timesteps/s 46.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 22.661 | 22.661 | 22.661 | 0.0 | 97.97 Neigh | 0.1177 | 0.1177 | 0.1177 | 0.0 | 0.51 Comm | 0.12692 | 0.12692 | 0.12692 | 0.0 | 0.55 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.15035 | 0.15035 | 0.15035 | 0.0 | 0.65 Other | | 0.0757 | | | 0.33 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12103 ave 12103 max 12103 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63454e+06 ave 1.63454e+06 max 1.63454e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1634544 Ave neighs/atom = 817.272 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.150459152928, Press = 1.86155024572461 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -8818.9427 -8818.9427 -8899.7376 -8899.7376 312.68466 312.68466 88927.714 88927.714 189.44101 189.44101 16000 -8817.6631 -8817.6631 -8900.1479 -8900.1479 319.22473 319.22473 88903.174 88903.174 615.34515 615.34515 Loop time of 22.219 on 1 procs for 1000 steps with 2000 atoms Performance: 3.889 ns/day, 6.172 hours/ns, 45.007 timesteps/s 47.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 21.805 | 21.805 | 21.805 | 0.0 | 98.14 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22749 | 0.22749 | 0.22749 | 0.0 | 1.02 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.1707 | 0.1707 | 0.1707 | 0.0 | 0.77 Other | | 0.01568 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12121 ave 12121 max 12121 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63567e+06 ave 1.63567e+06 max 1.63567e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1635670 Ave neighs/atom = 817.835 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.99350911558, Press = 2.99905955261429 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -8817.6631 -8817.6631 -8900.1479 -8900.1479 319.22473 319.22473 88903.174 88903.174 615.34515 615.34515 17000 -8819.4161 -8819.4161 -8900.8502 -8900.8502 315.15845 315.15845 88857.822 88857.822 1091.0499 1091.0499 Loop time of 22.8228 on 1 procs for 1000 steps with 2000 atoms Performance: 3.786 ns/day, 6.340 hours/ns, 43.816 timesteps/s 46.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 22.448 | 22.448 | 22.448 | 0.0 | 98.36 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10698 | 0.10698 | 0.10698 | 0.0 | 0.47 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.23164 | 0.23164 | 0.23164 | 0.0 | 1.01 Other | | 0.03586 | | | 0.16 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12117 ave 12117 max 12117 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63617e+06 ave 1.63617e+06 max 1.63617e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1636172 Ave neighs/atom = 818.086 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.356115798842, Press = 2.12872139458345 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -8819.4161 -8819.4161 -8900.8502 -8900.8502 315.15845 315.15845 88857.822 88857.822 1091.0499 1091.0499 18000 -8819.1384 -8819.1384 -8901.8515 -8901.8515 320.10805 320.10805 88833.707 88833.707 1312.615 1312.615 Loop time of 22.0281 on 1 procs for 1000 steps with 2000 atoms Performance: 3.922 ns/day, 6.119 hours/ns, 45.397 timesteps/s 48.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 21.565 | 21.565 | 21.565 | 0.0 | 97.90 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15917 | 0.15917 | 0.15917 | 0.0 | 0.72 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.28756 | 0.28756 | 0.28756 | 0.0 | 1.31 Other | | 0.01604 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12117 ave 12117 max 12117 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63727e+06 ave 1.63727e+06 max 1.63727e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1637272 Ave neighs/atom = 818.636 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.371278737082, Press = 1.3354553042466 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -8819.1384 -8819.1384 -8901.8515 -8901.8515 320.10805 320.10805 88833.707 88833.707 1312.615 1312.615 19000 -8818.8643 -8818.8643 -8899.3605 -8899.3605 311.52842 311.52842 88903.203 88903.203 637.22364 637.22364 Loop time of 19.0409 on 1 procs for 1000 steps with 2000 atoms Performance: 4.538 ns/day, 5.289 hours/ns, 52.518 timesteps/s 55.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 18.714 | 18.714 | 18.714 | 0.0 | 98.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11636 | 0.11636 | 0.11636 | 0.0 | 0.61 Output | 3.0041e-05 | 3.0041e-05 | 3.0041e-05 | 0.0 | 0.00 Modify | 0.19472 | 0.19472 | 0.19472 | 0.0 | 1.02 Other | | 0.01606 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12093 ave 12093 max 12093 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63782e+06 ave 1.63782e+06 max 1.63782e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1637816 Ave neighs/atom = 818.908 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.594561382785, Press = 1.06275229977704 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -8818.8643 -8818.8643 -8899.3605 -8899.3605 311.52842 311.52842 88903.203 88903.203 637.22364 637.22364 20000 -8818.4547 -8818.4547 -8900.732 -8900.732 318.42169 318.42169 88910.166 88910.166 448.84642 448.84642 Loop time of 20.8066 on 1 procs for 1000 steps with 2000 atoms Performance: 4.153 ns/day, 5.780 hours/ns, 48.062 timesteps/s 50.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 20.399 | 20.399 | 20.399 | 0.0 | 98.04 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14715 | 0.14715 | 0.14715 | 0.0 | 0.71 Output | 2.2173e-05 | 2.2173e-05 | 2.2173e-05 | 0.0 | 0.00 Modify | 0.24479 | 0.24479 | 0.24479 | 0.0 | 1.18 Other | | 0.0157 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12109 ave 12109 max 12109 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63641e+06 ave 1.63641e+06 max 1.63641e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1636414 Ave neighs/atom = 818.207 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.528682703847, Press = 0.9062281767024 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -8818.4547 -8818.4547 -8900.732 -8900.732 318.42169 318.42169 88910.166 88910.166 448.84642 448.84642 21000 -8823.5165 -8823.5165 -8902.2152 -8902.2152 304.57206 304.57206 88869.452 88869.452 682.44509 682.44509 Loop time of 20.3998 on 1 procs for 1000 steps with 2000 atoms Performance: 4.235 ns/day, 5.667 hours/ns, 49.020 timesteps/s 51.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 20.087 | 20.087 | 20.087 | 0.0 | 98.46 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12618 | 0.12618 | 0.12618 | 0.0 | 0.62 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.15134 | 0.15134 | 0.15134 | 0.0 | 0.74 Other | | 0.03565 | | | 0.17 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12097 ave 12097 max 12097 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.6359e+06 ave 1.6359e+06 max 1.6359e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1635896 Ave neighs/atom = 817.948 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.384510109586, Press = 0.283992997935958 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -8823.5165 -8823.5165 -8902.2152 -8902.2152 304.57206 304.57206 88869.452 88869.452 682.44509 682.44509 22000 -8817.1167 -8817.1167 -8899.507 -8899.507 318.85901 318.85901 88876.68 88876.68 955.38428 955.38428 Loop time of 19.7999 on 1 procs for 1000 steps with 2000 atoms Performance: 4.364 ns/day, 5.500 hours/ns, 50.505 timesteps/s 53.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 19.457 | 19.457 | 19.457 | 0.0 | 98.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11607 | 0.11607 | 0.11607 | 0.0 | 0.59 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.21147 | 0.21147 | 0.21147 | 0.0 | 1.07 Other | | 0.01556 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12105 ave 12105 max 12105 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63729e+06 ave 1.63729e+06 max 1.63729e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1637294 Ave neighs/atom = 818.647 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.355910013321, Press = 1.02850051958823 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -8817.1167 -8817.1167 -8899.507 -8899.507 318.85901 318.85901 88876.68 88876.68 955.38428 955.38428 23000 -8820.3221 -8820.3221 -8900.6102 -8900.6102 310.72316 310.72316 88816.589 88816.589 1754.3 1754.3 Loop time of 21.1562 on 1 procs for 1000 steps with 2000 atoms Performance: 4.084 ns/day, 5.877 hours/ns, 47.267 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 20.803 | 20.803 | 20.803 | 0.0 | 98.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12656 | 0.12656 | 0.12656 | 0.0 | 0.60 Output | 2.1935e-05 | 2.1935e-05 | 2.1935e-05 | 0.0 | 0.00 Modify | 0.15121 | 0.15121 | 0.15121 | 0.0 | 0.71 Other | | 0.07577 | | | 0.36 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12131 ave 12131 max 12131 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63696e+06 ave 1.63696e+06 max 1.63696e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1636958 Ave neighs/atom = 818.479 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.32417573947, Press = 1.18982268876144 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -8820.3221 -8820.3221 -8900.6102 -8900.6102 310.72316 310.72316 88816.589 88816.589 1754.3 1754.3 24000 -8823.5029 -8823.5029 -8902.3798 -8902.3798 305.26172 305.26172 88810.165 88810.165 1767.5522 1767.5522 Loop time of 21.0566 on 1 procs for 1000 steps with 2000 atoms Performance: 4.103 ns/day, 5.849 hours/ns, 47.491 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 20.662 | 20.662 | 20.662 | 0.0 | 98.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.18685 | 0.18685 | 0.18685 | 0.0 | 0.89 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.17143 | 0.17143 | 0.17143 | 0.0 | 0.81 Other | | 0.03576 | | | 0.17 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12121 ave 12121 max 12121 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63778e+06 ave 1.63778e+06 max 1.63778e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1637784 Ave neighs/atom = 818.892 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.288365890106, Press = 0.428334874954627 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -8823.5029 -8823.5029 -8902.3798 -8902.3798 305.26172 305.26172 88810.165 88810.165 1767.5522 1767.5522 25000 -8819.0735 -8819.0735 -8901.2372 -8901.2372 317.98201 317.98201 88876.543 88876.543 795.98655 795.98655 Loop time of 21.1929 on 1 procs for 1000 steps with 2000 atoms Performance: 4.077 ns/day, 5.887 hours/ns, 47.186 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 20.856 | 20.856 | 20.856 | 0.0 | 98.41 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14652 | 0.14652 | 0.14652 | 0.0 | 0.69 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.17414 | 0.17414 | 0.17414 | 0.0 | 0.82 Other | | 0.01572 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12097 ave 12097 max 12097 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.63776e+06 ave 1.63776e+06 max 1.63776e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1637760 Ave neighs/atom = 818.88 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 88935.2056643651 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0