# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.592786550521851*${_u_distance} variable latticeconst_converted equal 3.592786550521851*1 lattice fcc ${latticeconst_converted} lattice fcc 3.59278655052185 Lattice spacing in x,y,z = 3.59279 3.59279 3.59279 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (35.9279 35.9279 35.9279) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.0106311 secs variable mass_converted equal 63.546*${_u_mass} variable mass_converted equal 63.546*1 # specify which KIM Model to use pair_style kim EMT_Asap_Standard_JacobsenStoltzeNorskov_1996_Cu__MO_396616545191_001 pair_coeff * * Cu mass 1 ${mass_converted} mass 1 63.546 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 46376.1026745624 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 46376.1026745624/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 46376.1026745624/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 46376.1026745624/(1*1*${_u_distance}) variable V0_metal equal 46376.1026745624/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 46376.1026745624*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 46376.1026745624 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.98409 ghost atom cutoff = 6.98409 binsize = 3.49204, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.98409 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -13915.516 -13915.516 -14046.372 -14046.372 253.15 253.15 46376.103 46376.103 3013.7658 3013.7658 1000 -13772.132 -13772.132 -13906.661 -13906.661 260.2564 260.2564 47128.232 47128.232 -544.24128 -544.24128 Loop time of 68.6472 on 1 procs for 1000 steps with 4000 atoms Performance: 1.259 ns/day, 19.069 hours/ns, 14.567 timesteps/s 37.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.15 | 68.15 | 68.15 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077231 | 0.077231 | 0.077231 | 0.0 | 0.11 Output | 4.4107e-05 | 4.4107e-05 | 4.4107e-05 | 0.0 | 0.00 Modify | 0.37101 | 0.37101 | 0.37101 | 0.0 | 0.54 Other | | 0.04909 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536000 ave 536000 max 536000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536000 Ave neighs/atom = 134 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -13772.132 -13772.132 -13906.661 -13906.661 260.2564 260.2564 47128.232 47128.232 -544.24128 -544.24128 2000 -13784.861 -13784.861 -13914.33 -13914.33 250.46575 250.46575 47086.038 47086.038 -353.91095 -353.91095 Loop time of 73.4994 on 1 procs for 1000 steps with 4000 atoms Performance: 1.176 ns/day, 20.417 hours/ns, 13.606 timesteps/s 37.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 72.912 | 72.912 | 72.912 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077841 | 0.077841 | 0.077841 | 0.0 | 0.11 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.47029 | 0.47029 | 0.47029 | 0.0 | 0.64 Other | | 0.03942 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534052 ave 534052 max 534052 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534052 Ave neighs/atom = 133.513 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -13784.861 -13784.861 -13914.33 -13914.33 250.46575 250.46575 47086.038 47086.038 -353.91095 -353.91095 3000 -13779.143 -13779.143 -13907.363 -13907.363 248.05059 248.05059 47118.245 47118.245 -422.59924 -422.59924 Loop time of 70.7196 on 1 procs for 1000 steps with 4000 atoms Performance: 1.222 ns/day, 19.644 hours/ns, 14.140 timesteps/s 39.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 70.235 | 70.235 | 70.235 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058014 | 0.058014 | 0.058014 | 0.0 | 0.08 Output | 4.1008e-05 | 4.1008e-05 | 4.1008e-05 | 0.0 | 0.00 Modify | 0.36691 | 0.36691 | 0.36691 | 0.0 | 0.52 Other | | 0.05932 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5845 ave 5845 max 5845 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534532 ave 534532 max 534532 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534532 Ave neighs/atom = 133.633 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -13779.143 -13779.143 -13907.363 -13907.363 248.05059 248.05059 47118.245 47118.245 -422.59924 -422.59924 4000 -13782.18 -13782.18 -13911.934 -13911.934 251.01737 251.01737 47049.677 47049.677 921.88991 921.88991 Loop time of 71.8668 on 1 procs for 1000 steps with 4000 atoms Performance: 1.202 ns/day, 19.963 hours/ns, 13.915 timesteps/s 38.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 71.415 | 71.415 | 71.415 | 0.0 | 99.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11799 | 0.11799 | 0.11799 | 0.0 | 0.16 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.29462 | 0.29462 | 0.29462 | 0.0 | 0.41 Other | | 0.03935 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534188 ave 534188 max 534188 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534188 Ave neighs/atom = 133.547 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -13782.18 -13782.18 -13911.934 -13911.934 251.01737 251.01737 47049.677 47049.677 921.88991 921.88991 5000 -13781.808 -13781.808 -13912.002 -13912.002 251.86775 251.86775 47063.6 47063.6 512.48781 512.48781 Loop time of 68.2834 on 1 procs for 1000 steps with 4000 atoms Performance: 1.265 ns/day, 18.968 hours/ns, 14.645 timesteps/s 40.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 67.7 | 67.7 | 67.7 | 0.0 | 99.15 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13736 | 0.13736 | 0.13736 | 0.0 | 0.20 Output | 3.0994e-05 | 3.0994e-05 | 3.0994e-05 | 0.0 | 0.00 Modify | 0.40684 | 0.40684 | 0.40684 | 0.0 | 0.60 Other | | 0.03918 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5842 ave 5842 max 5842 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534428 ave 534428 max 534428 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534428 Ave neighs/atom = 133.607 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.118101435672, Press = -385.812614420871 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -13781.808 -13781.808 -13912.002 -13912.002 251.86775 251.86775 47063.6 47063.6 512.48781 512.48781 6000 -13780.385 -13780.385 -13910.422 -13910.422 251.56648 251.56648 47090.571 47090.571 -4.1025114 -4.1025114 Loop time of 70.1943 on 1 procs for 1000 steps with 4000 atoms Performance: 1.231 ns/day, 19.498 hours/ns, 14.246 timesteps/s 39.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.681 | 69.681 | 69.681 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.0778 | 0.0778 | 0.0778 | 0.0 | 0.11 Output | 0.020082 | 0.020082 | 0.020082 | 0.0 | 0.03 Modify | 0.35643 | 0.35643 | 0.35643 | 0.0 | 0.51 Other | | 0.05921 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5842 ave 5842 max 5842 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534512 ave 534512 max 534512 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534512 Ave neighs/atom = 133.628 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.811619845526, Press = -26.2320172270982 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -13780.385 -13780.385 -13910.422 -13910.422 251.56648 251.56648 47090.571 47090.571 -4.1025114 -4.1025114 7000 -13781.75 -13781.75 -13915.643 -13915.643 259.02483 259.02483 47084.647 47084.647 -376.07452 -376.07452 Loop time of 68.8078 on 1 procs for 1000 steps with 4000 atoms Performance: 1.256 ns/day, 19.113 hours/ns, 14.533 timesteps/s 40.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.114 | 68.114 | 68.114 | 0.0 | 98.99 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19817 | 0.19817 | 0.19817 | 0.0 | 0.29 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.37609 | 0.37609 | 0.37609 | 0.0 | 0.55 Other | | 0.1194 | | | 0.17 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5842 ave 5842 max 5842 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534458 ave 534458 max 534458 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534458 Ave neighs/atom = 133.614 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.003716154663, Press = -6.9439683863376 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -13781.75 -13781.75 -13915.643 -13915.643 259.02483 259.02483 47084.647 47084.647 -376.07452 -376.07452 8000 -13778.435 -13778.435 -13910.345 -13910.345 255.18884 255.18884 47122.506 47122.506 -830.85732 -830.85732 Loop time of 69.1604 on 1 procs for 1000 steps with 4000 atoms Performance: 1.249 ns/day, 19.211 hours/ns, 14.459 timesteps/s 39.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.548 | 68.548 | 68.548 | 0.0 | 99.11 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.097959 | 0.097959 | 0.097959 | 0.0 | 0.14 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.49556 | 0.49556 | 0.49556 | 0.0 | 0.72 Other | | 0.01924 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534794 ave 534794 max 534794 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534794 Ave neighs/atom = 133.698 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.982374404707, Press = -4.3537049757458 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -13778.435 -13778.435 -13910.345 -13910.345 255.18884 255.18884 47122.506 47122.506 -830.85732 -830.85732 9000 -13783.682 -13783.682 -13914.706 -13914.706 253.4745 253.4745 47024.741 47024.741 1331.6393 1331.6393 Loop time of 68.8684 on 1 procs for 1000 steps with 4000 atoms Performance: 1.255 ns/day, 19.130 hours/ns, 14.520 timesteps/s 40.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.354 | 68.354 | 68.354 | 0.0 | 99.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057914 | 0.057914 | 0.057914 | 0.0 | 0.08 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.39742 | 0.39742 | 0.39742 | 0.0 | 0.58 Other | | 0.05928 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534268 ave 534268 max 534268 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534268 Ave neighs/atom = 133.567 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.053541431974, Press = 2.0938807513852 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -13783.682 -13783.682 -13914.706 -13914.706 253.4745 253.4745 47024.741 47024.741 1331.6393 1331.6393 10000 -13778.094 -13778.094 -13910.101 -13910.101 255.37571 255.37571 47040.548 47040.548 1484.1252 1484.1252 Loop time of 69.6721 on 1 procs for 1000 steps with 4000 atoms Performance: 1.240 ns/day, 19.353 hours/ns, 14.353 timesteps/s 39.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.187 | 69.187 | 69.187 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058041 | 0.058041 | 0.058041 | 0.0 | 0.08 Output | 9.6083e-05 | 9.6083e-05 | 9.6083e-05 | 0.0 | 0.00 Modify | 0.36739 | 0.36739 | 0.36739 | 0.0 | 0.53 Other | | 0.05939 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5843 ave 5843 max 5843 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534836 ave 534836 max 534836 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534836 Ave neighs/atom = 133.709 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.329124134404, Press = -13.3160407266438 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -13778.094 -13778.094 -13910.101 -13910.101 255.37571 255.37571 47040.548 47040.548 1484.1252 1484.1252 11000 -13782.232 -13782.232 -13912.82 -13912.82 252.63178 252.63178 47122.283 47122.283 -1166.9473 -1166.9473 Loop time of 68.2089 on 1 procs for 1000 steps with 4000 atoms Performance: 1.267 ns/day, 18.947 hours/ns, 14.661 timesteps/s 40.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 67.6 | 67.6 | 67.6 | 0.0 | 99.11 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13821 | 0.13821 | 0.13821 | 0.0 | 0.20 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.40188 | 0.40188 | 0.40188 | 0.0 | 0.59 Other | | 0.06907 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534514 ave 534514 max 534514 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534514 Ave neighs/atom = 133.629 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.411285773325, Press = -7.89674545186936 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -13782.232 -13782.232 -13912.82 -13912.82 252.63178 252.63178 47122.283 47122.283 -1166.9473 -1166.9473 12000 -13781.309 -13781.309 -13912.627 -13912.627 254.04431 254.04431 47106.946 47106.946 -684.70627 -684.70627 Loop time of 65.9833 on 1 procs for 1000 steps with 4000 atoms Performance: 1.309 ns/day, 18.329 hours/ns, 15.155 timesteps/s 41.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 65.55 | 65.55 | 65.55 | 0.0 | 99.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077119 | 0.077119 | 0.077119 | 0.0 | 0.12 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.29635 | 0.29635 | 0.29635 | 0.0 | 0.45 Other | | 0.06033 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5842 ave 5842 max 5842 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534268 ave 534268 max 534268 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534268 Ave neighs/atom = 133.567 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.322695086865, Press = -1.60782478607303 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -13781.309 -13781.309 -13912.627 -13912.627 254.04431 254.04431 47106.946 47106.946 -684.70627 -684.70627 13000 -13778.805 -13778.805 -13910.197 -13910.197 254.18731 254.18731 47062.471 47062.471 833.23885 833.23885 Loop time of 66.2649 on 1 procs for 1000 steps with 4000 atoms Performance: 1.304 ns/day, 18.407 hours/ns, 15.091 timesteps/s 41.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 65.733 | 65.733 | 65.733 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.085808 | 0.085808 | 0.085808 | 0.0 | 0.13 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.42686 | 0.42686 | 0.42686 | 0.0 | 0.64 Other | | 0.0193 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534394 ave 534394 max 534394 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534394 Ave neighs/atom = 133.599 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.257887169636, Press = -2.39027646792693 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -13778.805 -13778.805 -13910.197 -13910.197 254.18731 254.18731 47062.471 47062.471 833.23885 833.23885 14000 -13784.822 -13784.822 -13914.318 -13914.318 250.51869 250.51869 47019.571 47019.571 1499.8786 1499.8786 Loop time of 67.8681 on 1 procs for 1000 steps with 4000 atoms Performance: 1.273 ns/day, 18.852 hours/ns, 14.734 timesteps/s 40.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 67.334 | 67.334 | 67.334 | 0.0 | 99.21 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.09833 | 0.09833 | 0.09833 | 0.0 | 0.14 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.35682 | 0.35682 | 0.35682 | 0.0 | 0.53 Other | | 0.07935 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534562 ave 534562 max 534562 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534562 Ave neighs/atom = 133.641 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.221039925582, Press = -3.69077784339666 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -13784.822 -13784.822 -13914.318 -13914.318 250.51869 250.51869 47019.571 47019.571 1499.8786 1499.8786 15000 -13781.058 -13781.058 -13911.869 -13911.869 253.06371 253.06371 47087.206 47087.206 -76.402437 -76.402437 Loop time of 65.6722 on 1 procs for 1000 steps with 4000 atoms Performance: 1.316 ns/day, 18.242 hours/ns, 15.227 timesteps/s 41.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 65.139 | 65.139 | 65.139 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.0979 | 0.0979 | 0.0979 | 0.0 | 0.15 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.39636 | 0.39636 | 0.39636 | 0.0 | 0.60 Other | | 0.03916 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534770 ave 534770 max 534770 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534770 Ave neighs/atom = 133.692 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.245487467567, Press = -9.19522822819215 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -13781.058 -13781.058 -13911.869 -13911.869 253.06371 253.06371 47087.206 47087.206 -76.402437 -76.402437 16000 -13780.41 -13780.41 -13912.713 -13912.713 255.94846 255.94846 47137.738 47137.738 -1531.5049 -1531.5049 Loop time of 65.1544 on 1 procs for 1000 steps with 4000 atoms Performance: 1.326 ns/day, 18.098 hours/ns, 15.348 timesteps/s 42.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 64.679 | 64.679 | 64.679 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037862 | 0.037862 | 0.037862 | 0.0 | 0.06 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.40783 | 0.40783 | 0.40783 | 0.0 | 0.63 Other | | 0.02996 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534396 ave 534396 max 534396 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534396 Ave neighs/atom = 133.599 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.17804899511, Press = -1.0614087433414 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -13780.41 -13780.41 -13912.713 -13912.713 255.94846 255.94846 47137.738 47137.738 -1531.5049 -1531.5049 17000 -13785.675 -13785.675 -13912.976 -13912.976 246.27267 246.27267 47063.9 47063.9 396.31806 396.31806 Loop time of 66.1352 on 1 procs for 1000 steps with 4000 atoms Performance: 1.306 ns/day, 18.371 hours/ns, 15.121 timesteps/s 41.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 65.639 | 65.639 | 65.639 | 0.0 | 99.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057989 | 0.057989 | 0.057989 | 0.0 | 0.09 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.41856 | 0.41856 | 0.41856 | 0.0 | 0.63 Other | | 0.01915 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5842 ave 5842 max 5842 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534278 ave 534278 max 534278 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534278 Ave neighs/atom = 133.57 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.163325033004, Press = -0.207630066337496 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -13785.675 -13785.675 -13912.976 -13912.976 246.27267 246.27267 47063.9 47063.9 396.31806 396.31806 18000 -13780.791 -13780.791 -13914.079 -13914.079 257.85516 257.85516 47067.327 47067.327 293.84774 293.84774 Loop time of 65.5344 on 1 procs for 1000 steps with 4000 atoms Performance: 1.318 ns/day, 18.204 hours/ns, 15.259 timesteps/s 42.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 64.977 | 64.977 | 64.977 | 0.0 | 99.15 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.118 | 0.118 | 0.118 | 0.0 | 0.18 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.40036 | 0.40036 | 0.40036 | 0.0 | 0.61 Other | | 0.03934 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5843 ave 5843 max 5843 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534586 ave 534586 max 534586 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534586 Ave neighs/atom = 133.647 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.212417888294, Press = -1.3346140993775 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -13780.791 -13780.791 -13914.079 -13914.079 257.85516 257.85516 47067.327 47067.327 293.84774 293.84774 19000 -13783.672 -13783.672 -13914.834 -13914.834 253.74228 253.74228 47096.321 47096.321 -704.53858 -704.53858 Loop time of 65.8212 on 1 procs for 1000 steps with 4000 atoms Performance: 1.313 ns/day, 18.284 hours/ns, 15.193 timesteps/s 41.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 65.247 | 65.247 | 65.247 | 0.0 | 99.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098033 | 0.098033 | 0.098033 | 0.0 | 0.15 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.40686 | 0.40686 | 0.40686 | 0.0 | 0.62 Other | | 0.06931 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534582 ave 534582 max 534582 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534582 Ave neighs/atom = 133.645 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.259797794565, Press = -3.56326656788072 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -13783.672 -13783.672 -13914.834 -13914.834 253.74228 253.74228 47096.321 47096.321 -704.53858 -704.53858 20000 -13774.461 -13774.461 -13908.686 -13908.686 259.66744 259.66744 47170.985 47170.985 -1891.3421 -1891.3421 Loop time of 65.8654 on 1 procs for 1000 steps with 4000 atoms Performance: 1.312 ns/day, 18.296 hours/ns, 15.182 timesteps/s 42.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 65.411 | 65.411 | 65.411 | 0.0 | 99.31 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077993 | 0.077993 | 0.077993 | 0.0 | 0.12 Output | 3.0994e-05 | 3.0994e-05 | 3.0994e-05 | 0.0 | 0.00 Modify | 0.33735 | 0.33735 | 0.33735 | 0.0 | 0.51 Other | | 0.03933 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5842 ave 5842 max 5842 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534488 ave 534488 max 534488 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534488 Ave neighs/atom = 133.622 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.318834223107, Press = -0.555355839290806 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -13774.461 -13774.461 -13908.686 -13908.686 259.66744 259.66744 47170.985 47170.985 -1891.3421 -1891.3421 21000 -13781.784 -13781.784 -13913.891 -13913.891 255.56849 255.56849 47052.012 47052.012 712.12405 712.12405 Loop time of 63.5125 on 1 procs for 1000 steps with 4000 atoms Performance: 1.360 ns/day, 17.642 hours/ns, 15.745 timesteps/s 43.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.028 | 63.028 | 63.028 | 0.0 | 99.24 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12785 | 0.12785 | 0.12785 | 0.0 | 0.20 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.31723 | 0.31723 | 0.31723 | 0.0 | 0.50 Other | | 0.03909 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534194 ave 534194 max 534194 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534194 Ave neighs/atom = 133.548 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.362573545968, Press = 1.24480340581877 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -13781.784 -13781.784 -13913.891 -13913.891 255.56849 255.56849 47052.012 47052.012 712.12405 712.12405 22000 -13779.812 -13779.812 -13913.187 -13913.187 258.02354 258.02354 47069.355 47069.355 331.91991 331.91991 Loop time of 63.101 on 1 procs for 1000 steps with 4000 atoms Performance: 1.369 ns/day, 17.528 hours/ns, 15.848 timesteps/s 43.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 62.625 | 62.625 | 62.625 | 0.0 | 99.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077992 | 0.077992 | 0.077992 | 0.0 | 0.12 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.33859 | 0.33859 | 0.33859 | 0.0 | 0.54 Other | | 0.05912 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534664 ave 534664 max 534664 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534664 Ave neighs/atom = 133.666 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.318229510029, Press = -2.31946490052038 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -13779.812 -13779.812 -13913.187 -13913.187 258.02354 258.02354 47069.355 47069.355 331.91991 331.91991 23000 -13785.202 -13785.202 -13913.242 -13913.242 247.70216 247.70216 47084.332 47084.332 -208.46066 -208.46066 Loop time of 58.1143 on 1 procs for 1000 steps with 4000 atoms Performance: 1.487 ns/day, 16.143 hours/ns, 17.207 timesteps/s 47.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 57.631 | 57.631 | 57.631 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058776 | 0.058776 | 0.058776 | 0.0 | 0.10 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.34492 | 0.34492 | 0.34492 | 0.0 | 0.59 Other | | 0.07928 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5844 ave 5844 max 5844 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534532 ave 534532 max 534532 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534532 Ave neighs/atom = 133.633 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.223987280143, Press = -2.73611621862648 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -13785.202 -13785.202 -13913.242 -13913.242 247.70216 247.70216 47084.332 47084.332 -208.46066 -208.46066 24000 -13781.441 -13781.441 -13911.143 -13911.143 250.9174 250.9174 47110.064 47110.064 -688.83943 -688.83943 Loop time of 55.2508 on 1 procs for 1000 steps with 4000 atoms Performance: 1.564 ns/day, 15.347 hours/ns, 18.099 timesteps/s 49.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 54.736 | 54.736 | 54.736 | 0.0 | 99.07 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037695 | 0.037695 | 0.037695 | 0.0 | 0.07 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.43751 | 0.43751 | 0.43751 | 0.0 | 0.79 Other | | 0.03926 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534600 ave 534600 max 534600 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534600 Ave neighs/atom = 133.65 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.207689352861, Press = -2.03801303832297 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -13781.441 -13781.441 -13911.143 -13911.143 250.9174 250.9174 47110.064 47110.064 -688.83943 -688.83943 25000 -13774.998 -13774.998 -13908.954 -13908.954 259.14565 259.14565 47101.772 47101.772 -42.595275 -42.595275 Loop time of 55.0716 on 1 procs for 1000 steps with 4000 atoms Performance: 1.569 ns/day, 15.298 hours/ns, 18.158 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 54.637 | 54.637 | 54.637 | 0.0 | 99.21 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.078097 | 0.078097 | 0.078097 | 0.0 | 0.14 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.31725 | 0.31725 | 0.31725 | 0.0 | 0.58 Other | | 0.03931 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5844 ave 5844 max 5844 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 534382 ave 534382 max 534382 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 534382 Ave neighs/atom = 133.595 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 47084.9877539087 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0