-------------------------------------------------------------------------- By default, for Open MPI 4.0 and later, infiniband ports on a device are not used by default. The intent is to use UCX for these devices. You can override this policy by setting the btl_openib_allow_ib MCA parameter to true. Local host: c450-011 Local adapter: hfi1_0 Local port: 1 -------------------------------------------------------------------------- -------------------------------------------------------------------------- WARNING: There was an error initializing an OpenFabrics device. Local host: c450-011 Local device: hfi1_0 -------------------------------------------------------------------------- -------------------------------------------------------------------------- By default, for Open MPI 4.0 and later, infiniband ports on a device are not used by default. The intent is to use UCX for these devices. You can override this policy by setting the btl_openib_allow_ib MCA parameter to true. Local host: c450-011 Local adapter: hfi1_0 Local port: 1 -------------------------------------------------------------------------- -------------------------------------------------------------------------- WARNING: There was an error initializing an OpenFabrics device. Local host: c450-011 Local device: hfi1_0 -------------------------------------------------------------------------- double free or corruption (!prev) [c450-011:260348] *** Process received signal *** [c450-011:260348] Signal: Aborted (6) [c450-011:260348] Signal code: (-6) [c450-011:260348] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x46210)[0x2b8ac4a63210] [c450-011:260348] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x2b8ac4a6318b] [c450-011:260348] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x2b8ac4a42859] [c450-011:260348] [ 3] /lib/x86_64-linux-gnu/libc.so.6(+0x903ee)[0x2b8ac4aad3ee] [c450-011:260348] [ 4] /lib/x86_64-linux-gnu/libc.so.6(+0x9847c)[0x2b8ac4ab547c] [c450-011:260348] [ 5] /lib/x86_64-linux-gnu/libc.so.6(+0x9a12c)[0x2b8ac4ab712c] [c450-011:260348] [ 6] /work/07753/dskarls/stampede2/jobs/dskarls/job-fd4b601f-e6dc-45a7-8d5c-10885b44163c-007-dfc442c9-cf70-46c6-b8b5-b84a2906e5cd/TE_359837946434_003-and-MO_315965276297_000-1638724461/staged_job_files/repository/md/EDIP_LAMMPS__MD_783584031339_000/libkim-api-model-driver.so(_ZN4EDIP7DestroyEPN3KIM12ModelDestroyE+0xeb)[0x2b8ad42d1b6b] [c450-011:260348] [ 7] /usr/local/lib/libkim-api.so.2(_ZN3KIM19ModelImplementation12ModelDestroyEv+0x23b)[0x2b8ac52da54b] [c450-011:260348] [ 8] /usr/local/lib/libkim-api.so.2(_ZN3KIM19ModelImplementation7DestroyEPPS0_+0x3d1)[0x2b8ac52f7de1] [c450-011:260348] [ 9] /usr/local/lib/libkim-api.so.2(_ZN3KIM5Model7DestroyEPPS0_+0x18)[0x2b8ac52a82c8] [c450-011:260348] [10] /usr/local/lib/libkim-api.so.2(KIM_Model_Destroy+0x33)[0x2b8ac5310bc3] [c450-011:260348] [11] /usr/local/lib/liblammps.so.0(_ZN9LAMMPS_NS7PairKIM8kim_freeEv+0x73)[0x2b8ac43d2c83] [c450-011:260348] [12] /usr/local/lib/liblammps.so.0(_ZN9LAMMPS_NS7PairKIMD1Ev+0x14c)[0x2b8ac43d2e3c] [c450-011:260348] [13] /usr/local/lib/liblammps.so.0(_ZN9LAMMPS_NS7PairKIMD0Ev+0xd)[0x2b8ac43d2f2d] [c450-011:260348] [14] /usr/local/lib/liblammps.so.0(_ZN9LAMMPS_NS5ForceD1Ev+0xa8)[0x2b8ac41c9de8] [c450-011:260348] [15] /usr/local/lib/liblammps.so.0(_ZN9LAMMPS_NS5ForceD0Ev+0xd)[0x2b8ac41ca1ad] [c450-011:260348] [16] /usr/local/lib/liblammps.so.0(_ZN9LAMMPS_NS6LAMMPS7destroyEv+0x45)[0x2b8ac420fae5] [c450-011:260348] [17] /usr/local/lib/liblammps.so.0(_ZN9LAMMPS_NS5Input5clearEv+0x32)[0x2b8ac41fc462] [c450-011:260348] [18] /usr/local/lib/liblammps.so.0(_ZN9LAMMPS_NS5Input15execute_commandEv+0x960)[0x2b8ac4205b70] [c450-011:260348] [19] /usr/local/lib/liblammps.so.0(_ZN9LAMMPS_NS5Input4fileEv+0x17e)[0x2b8ac42060ce] [c450-011:260348] [20] lammps(+0x132e)[0x56361298232e] [c450-011:260348] [21] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x2b8ac4a440b3] [c450-011:260348] [22] lammps(+0x13ae)[0x5636129823ae] [c450-011:260348] *** End of error message *** ../../td/CohesiveEnergyVsLatticeConstant__TD_554653289799_003/runner: line 234: 260348 Aborted lammps -in output/lammps.in > output/lammps.log {"realtime":15.40,"usertime":9.30,"systime":2.80,"memmax":67644,"memavg":0}