Traceback (most recent call last): File "../../td/SurfaceEnergyCubicCrystalBrokenBondFit__TD_955413365818_004/runner", line 275, in indices, energies, surfaceEnergyDict, calcTime, surfaceVectorDict, surfaceEnergyUnrelaxed, surfaceP0, surfaceP1 = sweepSurfaces( File "../../td/SurfaceEnergyCubicCrystalBrokenBondFit__TD_955413365818_004/runner", line 66, in sweepSurfaces E_unrelaxed, E_relaxed, surf_lattice_vect, p0, p1 = getSurfaceEnergy( File "../../td/SurfaceEnergyCubicCrystalBrokenBondFit__TD_955413365818_004/runner", line 127, in getSurfaceEnergy e_unrelaxed, e_relaxed, pos_unrelaxed, pos_relaxed = surface_energy(surf) File "/work2/08773/bwaters/stampede2/bwaters/job-1b4c725f-75af-42d1-ac10-a9fbcad90d2b-007-73369838-5d11-49bf-9447-6b9235e5dbb8/TE_378149060769_004-and-MO_943864507178_000-1657843048/staged_job_files/repository/td/SurfaceEnergyCubicCrystalBrokenBondFit__TD_955413365818_004/surface.py", line 211, in surface_energy dyn.run(fmax=accuracy) File "/usr/local/lib/python3.8/dist-packages/ase/optimize/optimize.py", line 269, in run return Dynamics.run(self) File "/usr/local/lib/python3.8/dist-packages/ase/optimize/optimize.py", line 156, in run for converged in Dynamics.irun(self): File "/usr/local/lib/python3.8/dist-packages/ase/optimize/optimize.py", line 143, in irun self.log() File "/usr/local/lib/python3.8/dist-packages/ase/optimize/optimize.py", line 285, in log e = self.atoms.get_potential_energy( File "/usr/local/lib/python3.8/dist-packages/ase/atoms.py", line 728, in get_potential_energy energy = self._calc.get_potential_energy( File "/usr/local/lib/python3.8/dist-packages/ase/calculators/calculator.py", line 709, in get_potential_energy energy = self.get_property('energy', atoms) File "/usr/local/lib/python3.8/dist-packages/ase/calculators/calculator.py", line 731, in get_property system_changes = self.check_state(atoms) File "/usr/local/lib/python3.8/dist-packages/ase/calculators/kim/kimmodel.py", line 315, in check_state system_changes = compare_atoms( File "/usr/local/lib/python3.8/dist-packages/ase/calculators/calculator.py", line 96, in compare_atoms if not equal(getattr(atoms1, prop), getattr(atoms2, prop), File "/usr/local/lib/python3.8/dist-packages/ase/calculators/calculator.py", line 232, in equal return np.allclose(a, b, rtol=rtol, atol=atol) File "<__array_function__ internals>", line 5, in allclose File "/usr/local/lib/python3.8/dist-packages/numpy/core/numeric.py", line 2249, in allclose res = all(isclose(a, b, rtol=rtol, atol=atol, equal_nan=equal_nan)) File "<__array_function__ internals>", line 5, in isclose File "/usr/local/lib/python3.8/dist-packages/numpy/core/numeric.py", line 2357, in isclose if all(xfin) and all(yfin): File "<__array_function__ internals>", line 5, in all File "/usr/local/lib/python3.8/dist-packages/numpy/core/fromnumeric.py", line 2367, in all @array_function_dispatch(_all_dispatcher) File "../../td/SurfaceEnergyCubicCrystalBrokenBondFit__TD_955413365818_004/runner", line 229, in handler1 raise Exception("first calculation took too long, aborting model-test pair") Exception: first calculation took too long, aborting model-test pair Command exited with non-zero status 1 {"realtime":3604.15,"usertime":3600.76,"systime":38.71,"memmax":219616,"memavg":0}