# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 6.070152866840363*${_u_distance} variable latticeconst_converted equal 6.070152866840363*1 lattice fcc ${latticeconst_converted} lattice fcc 6.07015286684036 Lattice spacing in x,y,z = 6.07015 6.07015 6.07015 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (60.7015 60.7015 60.7015) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000468016 secs variable mass_converted equal 87.62*${_u_mass} variable mass_converted equal 87.62*1 # specify which KIM Model to use pair_style kim Morse_Shifted_GirifalcoWeizer_1959HighCutoff_Sr__MO_497591319122_003 WARNING: KIM Model does not provide `partialParticleVirial'; virial per atom will be zero (src/KIM/pair_kim.cpp:979) pair_coeff * * Sr mass 1 ${mass_converted} mass 1 87.62 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 223665.440515879 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 223665.440515879/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 223665.440515879/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 223665.440515879/(1*1*${_u_distance}) variable V0_metal equal 223665.440515879/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 223665.440515879*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 223665.440515879 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 273.15*${_u_temperature} variable temp_converted equal 273.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 273.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "273.15 - 0.2" variable T_up equal "273.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 20.5961 ghost atom cutoff = 20.5961 binsize = 10.298, bins = 6 6 6 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 20.5961 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 16.55 | 16.55 | 16.55 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -6781.2224 -6781.2224 -6922.4167 -6922.4167 273.15 273.15 223665.44 223665.44 674.27651 674.27651 1000 -6623.9328 -6623.9328 -6765.3594 -6765.3594 273.59931 273.59931 228907.73 228907.73 -258.37209 -258.37209 Loop time of 117.031 on 1 procs for 1000 steps with 4000 atoms Performance: 0.738 ns/day, 32.508 hours/ns, 8.545 timesteps/s 50.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 115.6 | 115.6 | 115.6 | 0.0 | 98.78 Neigh | 0.91445 | 0.91445 | 0.91445 | 0.0 | 0.78 Comm | 0.17578 | 0.17578 | 0.17578 | 0.0 | 0.15 Output | 4.3869e-05 | 4.3869e-05 | 4.3869e-05 | 0.0 | 0.00 Modify | 0.31366 | 0.31366 | 0.31366 | 0.0 | 0.27 Other | | 0.023 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54568e+06 ave 2.54568e+06 max 2.54568e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2545680 Ave neighs/atom = 636.42 Neighbor list builds = 6 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -6623.9328 -6623.9328 -6765.3594 -6765.3594 273.59931 273.59931 228907.73 228907.73 -258.37209 -258.37209 2000 -6631.314 -6631.314 -6774.942 -6774.942 277.85812 277.85812 228196.04 228196.04 -0.56412188 -0.56412188 Loop time of 108.212 on 1 procs for 1000 steps with 4000 atoms Performance: 0.798 ns/day, 30.059 hours/ns, 9.241 timesteps/s 55.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 107.14 | 107.14 | 107.14 | 0.0 | 99.01 Neigh | 0.69346 | 0.69346 | 0.69346 | 0.0 | 0.64 Comm | 0.10455 | 0.10455 | 0.10455 | 0.0 | 0.10 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.2334 | 0.2334 | 0.2334 | 0.0 | 0.22 Other | | 0.04297 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.55071e+06 ave 2.55071e+06 max 2.55071e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2550706 Ave neighs/atom = 637.677 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -6631.314 -6631.314 -6774.942 -6774.942 277.85812 277.85812 228196.04 228196.04 -0.56412188 -0.56412188 3000 -6638.1804 -6638.1804 -6783.74 -6783.74 281.59491 281.59491 228071.8 228071.8 -17.732316 -17.732316 Loop time of 91.981 on 1 procs for 1000 steps with 4000 atoms Performance: 0.939 ns/day, 25.550 hours/ns, 10.872 timesteps/s 64.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 91.024 | 91.024 | 91.024 | 0.0 | 98.96 Neigh | 0.54787 | 0.54787 | 0.54787 | 0.0 | 0.60 Comm | 0.11417 | 0.11417 | 0.11417 | 0.0 | 0.12 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.23244 | 0.23244 | 0.23244 | 0.0 | 0.25 Other | | 0.06285 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.55239e+06 ave 2.55239e+06 max 2.55239e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2552390 Ave neighs/atom = 638.097 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -6638.1804 -6638.1804 -6783.74 -6783.74 281.59491 281.59491 228071.8 228071.8 -17.732316 -17.732316 4000 -6642.7056 -6642.7056 -6779.2423 -6779.2423 264.13935 264.13935 228133.62 228133.62 -47.379749 -47.379749 Loop time of 87.8651 on 1 procs for 1000 steps with 4000 atoms Performance: 0.983 ns/day, 24.407 hours/ns, 11.381 timesteps/s 68.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 86.871 | 86.871 | 86.871 | 0.0 | 98.87 Neigh | 0.57234 | 0.57234 | 0.57234 | 0.0 | 0.65 Comm | 0.084583 | 0.084583 | 0.084583 | 0.0 | 0.10 Output | 4.3154e-05 | 4.3154e-05 | 4.3154e-05 | 0.0 | 0.00 Modify | 0.29428 | 0.29428 | 0.29428 | 0.0 | 0.33 Other | | 0.04292 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.55627e+06 ave 2.55627e+06 max 2.55627e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2556268 Ave neighs/atom = 639.067 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -6642.7056 -6642.7056 -6779.2423 -6779.2423 264.13935 264.13935 228133.62 228133.62 -47.379749 -47.379749 5000 -6632.9991 -6632.9991 -6775.1161 -6775.1161 274.93496 274.93496 227778.52 227778.52 210.85965 210.85965 Loop time of 78.6432 on 1 procs for 1000 steps with 4000 atoms Performance: 1.099 ns/day, 21.845 hours/ns, 12.716 timesteps/s 75.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 77.904 | 77.904 | 77.904 | 0.0 | 99.06 Neigh | 0.43155 | 0.43155 | 0.43155 | 0.0 | 0.55 Comm | 0.11064 | 0.11064 | 0.11064 | 0.0 | 0.14 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.17401 | 0.17401 | 0.17401 | 0.0 | 0.22 Other | | 0.02283 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54959e+06 ave 2.54959e+06 max 2.54959e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2549594 Ave neighs/atom = 637.399 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 278.276975682123, Press = 60.6061768414405 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -6632.9991 -6632.9991 -6775.1161 -6775.1161 274.93496 274.93496 227778.52 227778.52 210.85965 210.85965 6000 -6638.5379 -6638.5379 -6776.798 -6776.798 267.4736 267.4736 228395.71 228395.71 -147.3111 -147.3111 Loop time of 76.1846 on 1 procs for 1000 steps with 4000 atoms Performance: 1.134 ns/day, 21.162 hours/ns, 13.126 timesteps/s 78.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 75.259 | 75.259 | 75.259 | 0.0 | 98.79 Neigh | 0.54398 | 0.54398 | 0.54398 | 0.0 | 0.71 Comm | 0.085459 | 0.085459 | 0.085459 | 0.0 | 0.11 Output | 3.0041e-05 | 3.0041e-05 | 3.0041e-05 | 0.0 | 0.00 Modify | 0.23278 | 0.23278 | 0.23278 | 0.0 | 0.31 Other | | 0.06294 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54932e+06 ave 2.54932e+06 max 2.54932e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2549316 Ave neighs/atom = 637.329 Neighbor list builds = 6 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.393232124522, Press = -0.524442713428688 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -6638.5379 -6638.5379 -6776.798 -6776.798 267.4736 267.4736 228395.71 228395.71 -147.3111 -147.3111 7000 -6631.0058 -6631.0058 -6777.4573 -6777.4573 283.32042 283.32042 228238.93 228238.93 -31.168901 -31.168901 Loop time of 96.0129 on 1 procs for 1000 steps with 4000 atoms Performance: 0.900 ns/day, 26.670 hours/ns, 10.415 timesteps/s 62.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 94.936 | 94.936 | 94.936 | 0.0 | 98.88 Neigh | 0.51987 | 0.51987 | 0.51987 | 0.0 | 0.54 Comm | 0.19605 | 0.19605 | 0.19605 | 0.0 | 0.20 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.31742 | 0.31742 | 0.31742 | 0.0 | 0.33 Other | | 0.04312 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.55567e+06 ave 2.55567e+06 max 2.55567e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2555668 Ave neighs/atom = 638.917 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.333503451531, Press = 7.62217283608157 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -6631.0058 -6631.0058 -6777.4573 -6777.4573 283.32042 283.32042 228238.93 228238.93 -31.168901 -31.168901 8000 -6637.7513 -6637.7513 -6777.7497 -6777.7497 270.83651 270.83651 227858.53 227858.53 119.53362 119.53362 Loop time of 94.9642 on 1 procs for 1000 steps with 4000 atoms Performance: 0.910 ns/day, 26.379 hours/ns, 10.530 timesteps/s 62.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 93.952 | 93.952 | 93.952 | 0.0 | 98.93 Neigh | 0.53894 | 0.53894 | 0.53894 | 0.0 | 0.57 Comm | 0.14602 | 0.14602 | 0.14602 | 0.0 | 0.15 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.30456 | 0.30456 | 0.30456 | 0.0 | 0.32 Other | | 0.02293 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.55071e+06 ave 2.55071e+06 max 2.55071e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2550706 Ave neighs/atom = 637.677 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.148695694089, Press = 0.943774987617572 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -6637.7513 -6637.7513 -6777.7497 -6777.7497 270.83651 270.83651 227858.53 227858.53 119.53362 119.53362 9000 -6633.4105 -6633.4105 -6775.266 -6775.266 274.42902 274.42902 228457.99 228457.99 -152.98758 -152.98758 Loop time of 112.13 on 1 procs for 1000 steps with 4000 atoms Performance: 0.771 ns/day, 31.147 hours/ns, 8.918 timesteps/s 53.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.85 | 110.85 | 110.85 | 0.0 | 98.86 Neigh | 0.92336 | 0.92336 | 0.92336 | 0.0 | 0.82 Comm | 0.10535 | 0.10535 | 0.10535 | 0.0 | 0.09 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.22859 | 0.22859 | 0.22859 | 0.0 | 0.20 Other | | 0.0232 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54961e+06 ave 2.54961e+06 max 2.54961e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2549612 Ave neighs/atom = 637.403 Neighbor list builds = 6 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.261304159045, Press = 1.16063869183548 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -6633.4105 -6633.4105 -6775.266 -6775.266 274.42902 274.42902 228457.99 228457.99 -152.98758 -152.98758 10000 -6634.4864 -6634.4864 -6776.5776 -6776.5776 274.885 274.885 228111.78 228111.78 14.153808 14.153808 Loop time of 125.382 on 1 procs for 1000 steps with 4000 atoms Performance: 0.689 ns/day, 34.828 hours/ns, 7.976 timesteps/s 47.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 124.27 | 124.27 | 124.27 | 0.0 | 99.11 Neigh | 0.73654 | 0.73654 | 0.73654 | 0.0 | 0.59 Comm | 0.11345 | 0.11345 | 0.11345 | 0.0 | 0.09 Output | 3.0041e-05 | 3.0041e-05 | 3.0041e-05 | 0.0 | 0.00 Modify | 0.23999 | 0.23999 | 0.23999 | 0.0 | 0.19 Other | | 0.02344 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.55495e+06 ave 2.55495e+06 max 2.55495e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2554948 Ave neighs/atom = 638.737 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.477148505764, Press = 2.16985250762224 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -6634.4864 -6634.4864 -6776.5776 -6776.5776 274.885 274.885 228111.78 228111.78 14.153808 14.153808 11000 -6629.891 -6629.891 -6773.1092 -6773.1092 277.06542 277.06542 228127.9 228127.9 60.399697 60.399697 Loop time of 140.132 on 1 procs for 1000 steps with 4000 atoms Performance: 0.617 ns/day, 38.925 hours/ns, 7.136 timesteps/s 42.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 138.74 | 138.74 | 138.74 | 0.0 | 99.01 Neigh | 0.8262 | 0.8262 | 0.8262 | 0.0 | 0.59 Comm | 0.21542 | 0.21542 | 0.21542 | 0.0 | 0.15 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.30789 | 0.30789 | 0.30789 | 0.0 | 0.22 Other | | 0.0432 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.55093e+06 ave 2.55093e+06 max 2.55093e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2550934 Ave neighs/atom = 637.734 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.446827873655, Press = 1.0389565274021 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -6629.891 -6629.891 -6773.1092 -6773.1092 277.06542 277.06542 228127.9 228127.9 60.399697 60.399697 12000 -6631.8219 -6631.8219 -6773.5465 -6773.5465 274.17585 274.17585 228306.06 228306.06 -46.994621 -46.994621 Loop time of 146.404 on 1 procs for 1000 steps with 4000 atoms Performance: 0.590 ns/day, 40.668 hours/ns, 6.830 timesteps/s 40.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 144.83 | 144.83 | 144.83 | 0.0 | 98.92 Neigh | 0.92454 | 0.92454 | 0.92454 | 0.0 | 0.63 Comm | 0.1852 | 0.1852 | 0.1852 | 0.0 | 0.13 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.38058 | 0.38058 | 0.38058 | 0.0 | 0.26 Other | | 0.08464 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.55384e+06 ave 2.55384e+06 max 2.55384e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2553842 Ave neighs/atom = 638.461 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.440385690164, Press = 0.706649451494692 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -6631.8219 -6631.8219 -6773.5465 -6773.5465 274.17585 274.17585 228306.06 228306.06 -46.994621 -46.994621 13000 -6631.0081 -6631.0081 -6773.5729 -6773.5729 275.80122 275.80122 228199.51 228199.51 9.7373469 9.7373469 Loop time of 137.364 on 1 procs for 1000 steps with 4000 atoms Performance: 0.629 ns/day, 38.157 hours/ns, 7.280 timesteps/s 43.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 135.71 | 135.71 | 135.71 | 0.0 | 98.79 Neigh | 1.0489 | 1.0489 | 1.0489 | 0.0 | 0.76 Comm | 0.18552 | 0.18552 | 0.18552 | 0.0 | 0.14 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.39943 | 0.39943 | 0.39943 | 0.0 | 0.29 Other | | 0.02305 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.55277e+06 ave 2.55277e+06 max 2.55277e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2552772 Ave neighs/atom = 638.193 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.307639903171, Press = 1.04018911658872 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -6631.0081 -6631.0081 -6773.5729 -6773.5729 275.80122 275.80122 228199.51 228199.51 9.7373469 9.7373469 14000 -6634.3301 -6634.3301 -6775.8587 -6775.8587 273.79672 273.79672 228184.39 228184.39 -11.841165 -11.841165 Loop time of 138 on 1 procs for 1000 steps with 4000 atoms Performance: 0.626 ns/day, 38.333 hours/ns, 7.246 timesteps/s 43.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 136.59 | 136.59 | 136.59 | 0.0 | 98.98 Neigh | 0.86986 | 0.86986 | 0.86986 | 0.0 | 0.63 Comm | 0.24534 | 0.24534 | 0.24534 | 0.0 | 0.18 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.26777 | 0.26777 | 0.26777 | 0.0 | 0.19 Other | | 0.02313 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.55235e+06 ave 2.55235e+06 max 2.55235e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2552350 Ave neighs/atom = 638.087 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.34936514621, Press = 0.686140766385479 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -6634.3301 -6634.3301 -6775.8587 -6775.8587 273.79672 273.79672 228184.39 228184.39 -11.841165 -11.841165 15000 -6635.6137 -6635.6137 -6778.2621 -6778.2621 275.96288 275.96288 228166.47 228166.47 -27.416547 -27.416547 Loop time of 135.985 on 1 procs for 1000 steps with 4000 atoms Performance: 0.635 ns/day, 37.774 hours/ns, 7.354 timesteps/s 44.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.64 | 134.64 | 134.64 | 0.0 | 99.01 Neigh | 0.83355 | 0.83355 | 0.83355 | 0.0 | 0.61 Comm | 0.16494 | 0.16494 | 0.16494 | 0.0 | 0.12 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.27869 | 0.27869 | 0.27869 | 0.0 | 0.20 Other | | 0.06309 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.55328e+06 ave 2.55328e+06 max 2.55328e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2553284 Ave neighs/atom = 638.321 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.244106332904, Press = 0.595644283457026 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -6635.6137 -6635.6137 -6778.2621 -6778.2621 275.96288 275.96288 228166.47 228166.47 -27.416547 -27.416547 16000 -6634.8502 -6634.8502 -6777.5877 -6777.5877 276.13534 276.13534 228076.73 228076.73 24.018975 24.018975 Loop time of 137.834 on 1 procs for 1000 steps with 4000 atoms Performance: 0.627 ns/day, 38.287 hours/ns, 7.255 timesteps/s 43.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 136.49 | 136.49 | 136.49 | 0.0 | 99.03 Neigh | 0.77298 | 0.77298 | 0.77298 | 0.0 | 0.56 Comm | 0.13541 | 0.13541 | 0.13541 | 0.0 | 0.10 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.36931 | 0.36931 | 0.36931 | 0.0 | 0.27 Other | | 0.06416 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.55255e+06 ave 2.55255e+06 max 2.55255e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2552552 Ave neighs/atom = 638.138 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.294734975563, Press = 0.558214092498476 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -6634.8502 -6634.8502 -6777.5877 -6777.5877 276.13534 276.13534 228076.73 228076.73 24.018975 24.018975 17000 -6635.7619 -6635.7619 -6775.729 -6775.729 270.77585 270.77585 228095.57 228095.57 24.63808 24.63808 Loop time of 130.319 on 1 procs for 1000 steps with 4000 atoms Performance: 0.663 ns/day, 36.200 hours/ns, 7.673 timesteps/s 45.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 128.98 | 128.98 | 128.98 | 0.0 | 98.97 Neigh | 0.72201 | 0.72201 | 0.72201 | 0.0 | 0.55 Comm | 0.27591 | 0.27591 | 0.27591 | 0.0 | 0.21 Output | 4.1008e-05 | 4.1008e-05 | 4.1008e-05 | 0.0 | 0.00 Modify | 0.28115 | 0.28115 | 0.28115 | 0.0 | 0.22 Other | | 0.05704 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.55239e+06 ave 2.55239e+06 max 2.55239e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2552388 Ave neighs/atom = 638.097 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.279310642063, Press = 0.25772640160035 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -6635.7619 -6635.7619 -6775.729 -6775.729 270.77585 270.77585 228095.57 228095.57 24.63808 24.63808 18000 -6637.0645 -6637.0645 -6777.0156 -6777.0156 270.74494 270.74494 228356.21 228356.21 -117.99664 -117.99664 Loop time of 131.263 on 1 procs for 1000 steps with 4000 atoms Performance: 0.658 ns/day, 36.462 hours/ns, 7.618 timesteps/s 45.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 129.64 | 129.64 | 129.64 | 0.0 | 98.77 Neigh | 1.0756 | 1.0756 | 1.0756 | 0.0 | 0.82 Comm | 0.20589 | 0.20589 | 0.20589 | 0.0 | 0.16 Output | 4.9114e-05 | 4.9114e-05 | 4.9114e-05 | 0.0 | 0.00 Modify | 0.31367 | 0.31367 | 0.31367 | 0.0 | 0.24 Other | | 0.02311 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.55197e+06 ave 2.55197e+06 max 2.55197e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2551968 Ave neighs/atom = 637.992 Neighbor list builds = 6 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.298955603878, Press = 0.595780026297273 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -6637.0645 -6637.0645 -6777.0156 -6777.0156 270.74494 270.74494 228356.21 228356.21 -117.99664 -117.99664 19000 -6635.0606 -6635.0606 -6777.1477 -6777.1477 274.87711 274.87711 227778.59 227778.59 183.64283 183.64283 Loop time of 134.893 on 1 procs for 1000 steps with 4000 atoms Performance: 0.641 ns/day, 37.470 hours/ns, 7.413 timesteps/s 44.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.61 | 133.61 | 133.61 | 0.0 | 99.05 Neigh | 0.88216 | 0.88216 | 0.88216 | 0.0 | 0.65 Comm | 0.10446 | 0.10446 | 0.10446 | 0.0 | 0.08 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.25777 | 0.25777 | 0.25777 | 0.0 | 0.19 Other | | 0.04297 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.55236e+06 ave 2.55236e+06 max 2.55236e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2552364 Ave neighs/atom = 638.091 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.352580597635, Press = 0.796035106557416 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -6635.0606 -6635.0606 -6777.1477 -6777.1477 274.87711 274.87711 227778.59 227778.59 183.64283 183.64283 20000 -6636.3629 -6636.3629 -6777.3252 -6777.3252 272.70109 272.70109 228155.54 228155.54 -20.45317 -20.45317 Loop time of 134.485 on 1 procs for 1000 steps with 4000 atoms Performance: 0.642 ns/day, 37.357 hours/ns, 7.436 timesteps/s 44.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.96 | 132.96 | 132.96 | 0.0 | 98.86 Neigh | 0.98896 | 0.98896 | 0.98896 | 0.0 | 0.74 Comm | 0.16507 | 0.16507 | 0.16507 | 0.0 | 0.12 Output | 0.00011992 | 0.00011992 | 0.00011992 | 0.0 | 0.00 Modify | 0.32991 | 0.32991 | 0.32991 | 0.0 | 0.25 Other | | 0.0432 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.55011e+06 ave 2.55011e+06 max 2.55011e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2550114 Ave neighs/atom = 637.529 Neighbor list builds = 6 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T273.15.out" else "print 'not_converged' file output/vol_T273.15.out" print '${V}' file output/vol_T273.15.out 228137.934046067 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0