# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.559938663989308*${_u_distance} variable latticeconst_converted equal 5.559938663989308*1 lattice fcc ${latticeconst_converted} lattice fcc 5.55993866398931 Lattice spacing in x,y,z = 5.55994 5.55994 5.55994 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (55.5994 55.5994 55.5994) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.0305271 secs variable mass_converted equal 40.078*${_u_mass} variable mass_converted equal 40.078*1 # specify which KIM Model to use pair_style kim Morse_Shifted_GirifalcoWeizer_1959HighCutoff_Ca__MO_159753408472_003 WARNING: KIM Model does not provide `partialParticleVirial'; virial per atom will be zero (src/KIM/pair_kim.cpp:979) pair_coeff * * Ca mass 1 ${mass_converted} mass 1 40.078 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 171873.927712051 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 171873.927712051/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 171873.927712051/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 171873.927712051/(1*1*${_u_distance}) variable V0_metal equal 171873.927712051/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 171873.927712051*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 171873.927712051 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 333.15*${_u_temperature} variable temp_converted equal 333.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 333.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "333.15 - 0.2" variable T_up equal "333.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 18.8661 ghost atom cutoff = 18.8661 binsize = 9.43305, bins = 6 6 6 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 18.8661 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 16.55 | 16.55 | 16.55 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -7252.8315 -7252.8315 -7425.0405 -7425.0405 333.15 333.15 171873.93 171873.93 1070.1998 1070.1998 1000 -7062.8207 -7062.8207 -7237.3909 -7237.3909 337.71776 337.71776 176370.36 176370.36 -324.22668 -324.22668 Loop time of 120.947 on 1 procs for 1000 steps with 4000 atoms Performance: 0.714 ns/day, 33.596 hours/ns, 8.268 timesteps/s 48.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 118.77 | 118.77 | 118.77 | 0.0 | 98.20 Neigh | 1.5013 | 1.5013 | 1.5013 | 0.0 | 1.24 Comm | 0.18969 | 0.18969 | 0.18969 | 0.0 | 0.16 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.4428 | 0.4428 | 0.4428 | 0.0 | 0.37 Other | | 0.04346 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54184e+06 ave 2.54184e+06 max 2.54184e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2541844 Ave neighs/atom = 635.461 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -7062.8207 -7062.8207 -7237.3909 -7237.3909 337.71776 337.71776 176370.36 176370.36 -324.22668 -324.22668 2000 -7085.0837 -7085.0837 -7250.9835 -7250.9835 320.9444 320.9444 175610.34 175610.34 88.417477 88.417477 Loop time of 123.854 on 1 procs for 1000 steps with 4000 atoms Performance: 0.698 ns/day, 34.404 hours/ns, 8.074 timesteps/s 46.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.03 | 122.03 | 122.03 | 0.0 | 98.52 Neigh | 1.3829 | 1.3829 | 1.3829 | 0.0 | 1.12 Comm | 0.18611 | 0.18611 | 0.18611 | 0.0 | 0.15 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.19524 | 0.19524 | 0.19524 | 0.0 | 0.16 Other | | 0.06292 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54911e+06 ave 2.54911e+06 max 2.54911e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2549108 Ave neighs/atom = 637.277 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -7085.0837 -7085.0837 -7250.9835 -7250.9835 320.9444 320.9444 175610.34 175610.34 88.417477 88.417477 3000 -7065.6712 -7065.6712 -7241.8729 -7241.8729 340.87424 340.87424 175934.1 175934.1 8.3077715 8.3077715 Loop time of 144.88 on 1 procs for 1000 steps with 4000 atoms Performance: 0.596 ns/day, 40.244 hours/ns, 6.902 timesteps/s 40.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 142.78 | 142.78 | 142.78 | 0.0 | 98.55 Neigh | 1.4742 | 1.4742 | 1.4742 | 0.0 | 1.02 Comm | 0.19032 | 0.19032 | 0.19032 | 0.0 | 0.13 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.40692 | 0.40692 | 0.40692 | 0.0 | 0.28 Other | | 0.02341 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54563e+06 ave 2.54563e+06 max 2.54563e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2545626 Ave neighs/atom = 636.407 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -7065.6712 -7065.6712 -7241.8729 -7241.8729 340.87424 340.87424 175934.1 175934.1 8.3077715 8.3077715 4000 -7078.9716 -7078.9716 -7250.3951 -7250.3951 331.63039 331.63039 175815.58 175815.58 -54.346512 -54.346512 Loop time of 137.596 on 1 procs for 1000 steps with 4000 atoms Performance: 0.628 ns/day, 38.221 hours/ns, 7.268 timesteps/s 42.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 135.53 | 135.53 | 135.53 | 0.0 | 98.50 Neigh | 1.4088 | 1.4088 | 1.4088 | 0.0 | 1.02 Comm | 0.22334 | 0.22334 | 0.22334 | 0.0 | 0.16 Output | 4.22e-05 | 4.22e-05 | 4.22e-05 | 0.0 | 0.00 Modify | 0.3745 | 0.3745 | 0.3745 | 0.0 | 0.27 Other | | 0.06334 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54641e+06 ave 2.54641e+06 max 2.54641e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2546414 Ave neighs/atom = 636.604 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -7078.9716 -7078.9716 -7250.3951 -7250.3951 331.63039 331.63039 175815.58 175815.58 -54.346512 -54.346512 5000 -7074.6425 -7074.6425 -7242.5137 -7242.5137 324.75811 324.75811 175678.31 175678.31 170.37563 170.37563 Loop time of 134.189 on 1 procs for 1000 steps with 4000 atoms Performance: 0.644 ns/day, 37.275 hours/ns, 7.452 timesteps/s 43.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 131.91 | 131.91 | 131.91 | 0.0 | 98.30 Neigh | 1.6042 | 1.6042 | 1.6042 | 0.0 | 1.20 Comm | 0.24653 | 0.24653 | 0.24653 | 0.0 | 0.18 Output | 5.1975e-05 | 5.1975e-05 | 5.1975e-05 | 0.0 | 0.00 Modify | 0.36251 | 0.36251 | 0.36251 | 0.0 | 0.27 Other | | 0.06301 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54929e+06 ave 2.54929e+06 max 2.54929e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2549286 Ave neighs/atom = 637.322 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 335.716651791229, Press = 97.0126523264422 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -7074.6425 -7074.6425 -7242.5137 -7242.5137 324.75811 324.75811 175678.31 175678.31 170.37563 170.37563 6000 -7072.4779 -7072.4779 -7245.6751 -7245.6751 335.06164 335.06164 176162.39 176162.39 -286.84504 -286.84504 Loop time of 135.214 on 1 procs for 1000 steps with 4000 atoms Performance: 0.639 ns/day, 37.559 hours/ns, 7.396 timesteps/s 43.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.25 | 133.25 | 133.25 | 0.0 | 98.55 Neigh | 1.2775 | 1.2775 | 1.2775 | 0.0 | 0.94 Comm | 0.22659 | 0.22659 | 0.22659 | 0.0 | 0.17 Output | 5.9843e-05 | 5.9843e-05 | 5.9843e-05 | 0.0 | 0.00 Modify | 0.41876 | 0.41876 | 0.41876 | 0.0 | 0.31 Other | | 0.04328 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54933e+06 ave 2.54933e+06 max 2.54933e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2549332 Ave neighs/atom = 637.333 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 334.02640618397, Press = 2.3449172326716 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -7072.4779 -7072.4779 -7245.6751 -7245.6751 335.06164 335.06164 176162.39 176162.39 -286.84504 -286.84504 7000 -7073.7901 -7073.7901 -7244.6521 -7244.6521 330.54412 330.54412 175437.58 175437.58 387.65169 387.65169 Loop time of 133.517 on 1 procs for 1000 steps with 4000 atoms Performance: 0.647 ns/day, 37.088 hours/ns, 7.490 timesteps/s 43.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 131.19 | 131.19 | 131.19 | 0.0 | 98.26 Neigh | 1.7782 | 1.7782 | 1.7782 | 0.0 | 1.33 Comm | 0.207 | 0.207 | 0.207 | 0.0 | 0.16 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.29837 | 0.29837 | 0.29837 | 0.0 | 0.22 Other | | 0.04315 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54896e+06 ave 2.54896e+06 max 2.54896e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2548956 Ave neighs/atom = 637.239 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.114623286734, Press = -2.7818543942018 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -7073.7901 -7073.7901 -7244.6521 -7244.6521 330.54412 330.54412 175437.58 175437.58 387.65169 387.65169 8000 -7069.9105 -7069.9105 -7244.0685 -7244.0685 336.92042 336.92042 176004.04 176004.04 -108.33863 -108.33863 Loop time of 132.019 on 1 procs for 1000 steps with 4000 atoms Performance: 0.654 ns/day, 36.672 hours/ns, 7.575 timesteps/s 44.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 129.67 | 129.67 | 129.67 | 0.0 | 98.22 Neigh | 1.7391 | 1.7391 | 1.7391 | 0.0 | 1.32 Comm | 0.20579 | 0.20579 | 0.20579 | 0.0 | 0.16 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.36216 | 0.36216 | 0.36216 | 0.0 | 0.27 Other | | 0.04294 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.5461e+06 ave 2.5461e+06 max 2.5461e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2546100 Ave neighs/atom = 636.525 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.733190211102, Press = 6.48966368566447 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -7069.9105 -7069.9105 -7244.0685 -7244.0685 336.92042 336.92042 176004.04 176004.04 -108.33863 -108.33863 9000 -7075.267 -7075.267 -7245.6041 -7245.6041 329.52861 329.52861 175875.1 175875.1 -36.285888 -36.285888 Loop time of 129.803 on 1 procs for 1000 steps with 4000 atoms Performance: 0.666 ns/day, 36.056 hours/ns, 7.704 timesteps/s 45.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.7 | 127.7 | 127.7 | 0.0 | 98.38 Neigh | 1.5272 | 1.5272 | 1.5272 | 0.0 | 1.18 Comm | 0.25456 | 0.25456 | 0.25456 | 0.0 | 0.20 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.25628 | 0.25628 | 0.25628 | 0.0 | 0.20 Other | | 0.06304 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54612e+06 ave 2.54612e+06 max 2.54612e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2546116 Ave neighs/atom = 636.529 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.474417120828, Press = -0.78560967471558 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -7075.267 -7075.267 -7245.6041 -7245.6041 329.52861 329.52861 175875.1 175875.1 -36.285888 -36.285888 10000 -7070.0451 -7070.0451 -7244.1232 -7244.1232 336.76583 336.76583 175781.23 175781.23 86.339396 86.339396 Loop time of 127.242 on 1 procs for 1000 steps with 4000 atoms Performance: 0.679 ns/day, 35.345 hours/ns, 7.859 timesteps/s 45.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 125.31 | 125.31 | 125.31 | 0.0 | 98.48 Neigh | 1.3234 | 1.3234 | 1.3234 | 0.0 | 1.04 Comm | 0.24115 | 0.24115 | 0.24115 | 0.0 | 0.19 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.32816 | 0.32816 | 0.32816 | 0.0 | 0.26 Other | | 0.0429 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54807e+06 ave 2.54807e+06 max 2.54807e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2548072 Ave neighs/atom = 637.018 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.48665524099, Press = 1.74165345588632 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -7070.0451 -7070.0451 -7244.1232 -7244.1232 336.76583 336.76583 175781.23 175781.23 86.339396 86.339396 11000 -7076.3092 -7076.3092 -7248.5637 -7248.5637 333.23808 333.23808 175938.06 175938.06 -125.52818 -125.52818 Loop time of 128.814 on 1 procs for 1000 steps with 4000 atoms Performance: 0.671 ns/day, 35.782 hours/ns, 7.763 timesteps/s 45.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 126.83 | 126.83 | 126.83 | 0.0 | 98.46 Neigh | 1.3568 | 1.3568 | 1.3568 | 0.0 | 1.05 Comm | 0.18596 | 0.18596 | 0.18596 | 0.0 | 0.14 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.39927 | 0.39927 | 0.39927 | 0.0 | 0.31 Other | | 0.04292 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54635e+06 ave 2.54635e+06 max 2.54635e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2546350 Ave neighs/atom = 636.587 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.33455590463, Press = 0.678860610426784 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -7076.3092 -7076.3092 -7248.5637 -7248.5637 333.23808 333.23808 175938.06 175938.06 -125.52818 -125.52818 12000 -7073.123 -7073.123 -7243.9352 -7243.9352 330.4478 330.4478 175573.6 175573.6 272.07125 272.07125 Loop time of 127.126 on 1 procs for 1000 steps with 4000 atoms Performance: 0.680 ns/day, 35.313 hours/ns, 7.866 timesteps/s 46.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 124.89 | 124.89 | 124.89 | 0.0 | 98.24 Neigh | 1.6062 | 1.6062 | 1.6062 | 0.0 | 1.26 Comm | 0.18743 | 0.18743 | 0.18743 | 0.0 | 0.15 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.33763 | 0.33763 | 0.33763 | 0.0 | 0.27 Other | | 0.1032 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54906e+06 ave 2.54906e+06 max 2.54906e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2549058 Ave neighs/atom = 637.264 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.416794963042, Press = 0.465922602881553 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -7073.123 -7073.123 -7243.9352 -7243.9352 330.4478 330.4478 175573.6 175573.6 272.07125 272.07125 13000 -7074.0236 -7074.0236 -7245.0162 -7245.0162 330.79675 330.79675 176154.55 176154.55 -281.27427 -281.27427 Loop time of 116.576 on 1 procs for 1000 steps with 4000 atoms Performance: 0.741 ns/day, 32.382 hours/ns, 8.578 timesteps/s 50.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.53 | 114.53 | 114.53 | 0.0 | 98.25 Neigh | 1.3509 | 1.3509 | 1.3509 | 0.0 | 1.16 Comm | 0.27865 | 0.27865 | 0.27865 | 0.0 | 0.24 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.35 | 0.35 | 0.35 | 0.0 | 0.30 Other | | 0.06337 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.55202e+06 ave 2.55202e+06 max 2.55202e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2552016 Ave neighs/atom = 638.004 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.502414651771, Press = 2.66550917789412 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -7074.0236 -7074.0236 -7245.0162 -7245.0162 330.79675 330.79675 176154.55 176154.55 -281.27427 -281.27427 14000 -7079.9376 -7079.9376 -7247.8561 -7247.8561 324.84972 324.84972 175735.34 175735.34 34.5488 34.5488 Loop time of 107.802 on 1 procs for 1000 steps with 4000 atoms Performance: 0.801 ns/day, 29.945 hours/ns, 9.276 timesteps/s 54.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 106.25 | 106.25 | 106.25 | 0.0 | 98.56 Neigh | 1.1307 | 1.1307 | 1.1307 | 0.0 | 1.05 Comm | 0.10558 | 0.10558 | 0.10558 | 0.0 | 0.10 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.26809 | 0.26809 | 0.26809 | 0.0 | 0.25 Other | | 0.04348 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54403e+06 ave 2.54403e+06 max 2.54403e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2544028 Ave neighs/atom = 636.007 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.224712635986, Press = -1.08053755446997 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -7079.9376 -7079.9376 -7247.8561 -7247.8561 324.84972 324.84972 175735.34 175735.34 34.5488 34.5488 15000 -7070.5027 -7070.5027 -7244.8277 -7244.8277 337.2435 337.2435 175759.05 175759.05 97.627589 97.627589 Loop time of 100.393 on 1 procs for 1000 steps with 4000 atoms Performance: 0.861 ns/day, 27.887 hours/ns, 9.961 timesteps/s 58.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 98.746 | 98.746 | 98.746 | 0.0 | 98.36 Neigh | 1.1942 | 1.1942 | 1.1942 | 0.0 | 1.19 Comm | 0.14557 | 0.14557 | 0.14557 | 0.0 | 0.15 Output | 2.718e-05 | 2.718e-05 | 2.718e-05 | 0.0 | 0.00 Modify | 0.22422 | 0.22422 | 0.22422 | 0.0 | 0.22 Other | | 0.08296 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.55006e+06 ave 2.55006e+06 max 2.55006e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2550064 Ave neighs/atom = 637.516 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.215435550591, Press = 1.46994269041567 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -7070.5027 -7070.5027 -7244.8277 -7244.8277 337.2435 337.2435 175759.05 175759.05 97.627589 97.627589 16000 -7071.1962 -7071.1962 -7246.7917 -7246.7917 339.70144 339.70144 176045.64 176045.64 -185.57753 -185.57753 Loop time of 90.5171 on 1 procs for 1000 steps with 4000 atoms Performance: 0.955 ns/day, 25.144 hours/ns, 11.048 timesteps/s 64.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 89.055 | 89.055 | 89.055 | 0.0 | 98.38 Neigh | 1.1048 | 1.1048 | 1.1048 | 0.0 | 1.22 Comm | 0.11658 | 0.11658 | 0.11658 | 0.0 | 0.13 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.21808 | 0.21808 | 0.21808 | 0.0 | 0.24 Other | | 0.02278 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54491e+06 ave 2.54491e+06 max 2.54491e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2544908 Ave neighs/atom = 636.227 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.096898961021, Press = 0.326229406690605 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -7071.1962 -7071.1962 -7246.7917 -7246.7917 339.70144 339.70144 176045.64 176045.64 -185.57753 -185.57753 17000 -7073.9827 -7073.9827 -7248.6645 -7248.6645 337.93387 337.93387 175600.39 175600.39 188.10272 188.10272 Loop time of 83.1212 on 1 procs for 1000 steps with 4000 atoms Performance: 1.039 ns/day, 23.089 hours/ns, 12.031 timesteps/s 70.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 82.03 | 82.03 | 82.03 | 0.0 | 98.69 Neigh | 0.74896 | 0.74896 | 0.74896 | 0.0 | 0.90 Comm | 0.10823 | 0.10823 | 0.10823 | 0.0 | 0.13 Output | 5.3883e-05 | 5.3883e-05 | 5.3883e-05 | 0.0 | 0.00 Modify | 0.21078 | 0.21078 | 0.21078 | 0.0 | 0.25 Other | | 0.02289 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54724e+06 ave 2.54724e+06 max 2.54724e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2547238 Ave neighs/atom = 636.809 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.055728101778, Press = 0.30990110110349 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -7073.9827 -7073.9827 -7248.6645 -7248.6645 337.93387 337.93387 175600.39 175600.39 188.10272 188.10272 18000 -7074.2345 -7074.2345 -7245.2199 -7245.2199 330.78284 330.78284 176027.84 176027.84 -172.96866 -172.96866 Loop time of 82.3177 on 1 procs for 1000 steps with 4000 atoms Performance: 1.050 ns/day, 22.866 hours/ns, 12.148 timesteps/s 71.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 81.351 | 81.351 | 81.351 | 0.0 | 98.83 Neigh | 0.58577 | 0.58577 | 0.58577 | 0.0 | 0.71 Comm | 0.13844 | 0.13844 | 0.13844 | 0.0 | 0.17 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.21908 | 0.21908 | 0.21908 | 0.0 | 0.27 Other | | 0.02306 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54957e+06 ave 2.54957e+06 max 2.54957e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2549574 Ave neighs/atom = 637.394 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.159264699792, Press = 0.885622491230906 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -7074.2345 -7074.2345 -7245.2199 -7245.2199 330.78284 330.78284 176027.84 176027.84 -172.96866 -172.96866 19000 -7074.8218 -7074.8218 -7246.7569 -7246.7569 332.62015 332.62015 175744.8 175744.8 72.048152 72.048152 Loop time of 78.635 on 1 procs for 1000 steps with 4000 atoms Performance: 1.099 ns/day, 21.843 hours/ns, 12.717 timesteps/s 74.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 77.451 | 77.451 | 77.451 | 0.0 | 98.49 Neigh | 0.80599 | 0.80599 | 0.80599 | 0.0 | 1.02 Comm | 0.10627 | 0.10627 | 0.10627 | 0.0 | 0.14 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.22904 | 0.22904 | 0.22904 | 0.0 | 0.29 Other | | 0.04284 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54633e+06 ave 2.54633e+06 max 2.54633e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2546328 Ave neighs/atom = 636.582 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.13487949445, Press = -0.475018114011535 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -7074.8218 -7074.8218 -7246.7569 -7246.7569 332.62015 332.62015 175744.8 175744.8 72.048152 72.048152 20000 -7073.1145 -7073.1145 -7245.7024 -7245.7024 333.88303 333.88303 175735.19 175735.19 98.117915 98.117915 Loop time of 68.9612 on 1 procs for 1000 steps with 4000 atoms Performance: 1.253 ns/day, 19.156 hours/ns, 14.501 timesteps/s 85.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 67.725 | 67.725 | 67.725 | 0.0 | 98.21 Neigh | 0.94165 | 0.94165 | 0.94165 | 0.0 | 1.37 Comm | 0.089559 | 0.089559 | 0.089559 | 0.0 | 0.13 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.1618 | 0.1618 | 0.1618 | 0.0 | 0.23 Other | | 0.0432 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54922e+06 ave 2.54922e+06 max 2.54922e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2549222 Ave neighs/atom = 637.306 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.140915671625, Press = 1.74226574351016 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -7073.1145 -7073.1145 -7245.7024 -7245.7024 333.88303 333.88303 175735.19 175735.19 98.117915 98.117915 21000 -7068.2283 -7068.2283 -7243.0723 -7243.0723 338.24752 338.24752 176362.22 176362.22 -416.91029 -416.91029 Loop time of 65.6252 on 1 procs for 1000 steps with 4000 atoms Performance: 1.317 ns/day, 18.229 hours/ns, 15.238 timesteps/s 88.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 64.495 | 64.495 | 64.495 | 0.0 | 98.28 Neigh | 0.81117 | 0.81117 | 0.81117 | 0.0 | 1.24 Comm | 0.10543 | 0.10543 | 0.10543 | 0.0 | 0.16 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.19111 | 0.19111 | 0.19111 | 0.0 | 0.29 Other | | 0.02291 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.53861e+06 ave 2.53861e+06 max 2.53861e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2538610 Ave neighs/atom = 634.653 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.16394195145, Press = -0.780944787201098 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -7068.2283 -7068.2283 -7243.0723 -7243.0723 338.24752 338.24752 176362.22 176362.22 -416.91029 -416.91029 22000 -7076.001 -7076.001 -7246.0152 -7246.0152 328.9039 328.9039 175596.35 175596.35 211.28235 211.28235 Loop time of 76.7865 on 1 procs for 1000 steps with 4000 atoms Performance: 1.125 ns/day, 21.330 hours/ns, 13.023 timesteps/s 76.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 75.331 | 75.331 | 75.331 | 0.0 | 98.10 Neigh | 1.1213 | 1.1213 | 1.1213 | 0.0 | 1.46 Comm | 0.086177 | 0.086177 | 0.086177 | 0.0 | 0.11 Output | 3.0994e-05 | 3.0994e-05 | 3.0994e-05 | 0.0 | 0.00 Modify | 0.20451 | 0.20451 | 0.20451 | 0.0 | 0.27 Other | | 0.04396 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54987e+06 ave 2.54987e+06 max 2.54987e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2549866 Ave neighs/atom = 637.466 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.213081341693, Press = 0.596399357926058 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -7076.001 -7076.001 -7246.0152 -7246.0152 328.9039 328.9039 175596.35 175596.35 211.28235 211.28235 23000 -7071.6268 -7071.6268 -7246.7238 -7246.7238 338.73701 338.73701 176087.92 176087.92 -231.87279 -231.87279 Loop time of 84.6826 on 1 procs for 1000 steps with 4000 atoms Performance: 1.020 ns/day, 23.523 hours/ns, 11.809 timesteps/s 68.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 83.23 | 83.23 | 83.23 | 0.0 | 98.28 Neigh | 1.0176 | 1.0176 | 1.0176 | 0.0 | 1.20 Comm | 0.14546 | 0.14546 | 0.14546 | 0.0 | 0.17 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.26657 | 0.26657 | 0.26657 | 0.0 | 0.31 Other | | 0.02296 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54513e+06 ave 2.54513e+06 max 2.54513e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2545132 Ave neighs/atom = 636.283 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.077701686229, Press = 0.357229586542578 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 16.56 | 16.56 | 16.56 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -7071.6268 -7071.6268 -7246.7238 -7246.7238 338.73701 338.73701 176087.92 176087.92 -231.87279 -231.87279 24000 -7076.8707 -7076.8707 -7248.0821 -7248.0821 331.22005 331.22005 175626.22 175626.22 160.84343 160.84343 Loop time of 91.4655 on 1 procs for 1000 steps with 4000 atoms Performance: 0.945 ns/day, 25.407 hours/ns, 10.933 timesteps/s 63.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 89.655 | 89.655 | 89.655 | 0.0 | 98.02 Neigh | 1.2865 | 1.2865 | 1.2865 | 0.0 | 1.41 Comm | 0.15189 | 0.15189 | 0.15189 | 0.0 | 0.17 Output | 0.0221 | 0.0221 | 0.0221 | 0.0 | 0.02 Modify | 0.31397 | 0.31397 | 0.31397 | 0.0 | 0.34 Other | | 0.03648 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 13969 ave 13969 max 13969 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 2.54767e+06 ave 2.54767e+06 max 2.54767e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 2547668 Ave neighs/atom = 636.917 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T333.15.out" else "print 'not_converged' file output/vol_T333.15.out" print '${V}' file output/vol_T333.15.out 175829.739106753 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0