# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.5721513450145785*${_u_distance} variable latticeconst_converted equal 5.5721513450145785*1 lattice fcc ${latticeconst_converted} lattice fcc 5.57215134501458 Lattice spacing in x,y,z = 5.57215 5.57215 5.57215 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (55.7215 55.7215 55.7215) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.019062 secs variable mass_converted equal 40.078*${_u_mass} variable mass_converted equal 40.078*1 kim_interactions Ca #=== BEGIN kim_interactions ================================== pair_style kim Morse_Shifted_GirifalcoWeizer_1959MedCutoff_Ca__MO_562200212426_004 pair_coeff * * Ca #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 40.078 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 173009.006140434 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 173009.006140434/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 173009.006140434/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 173009.006140434/(1*1*${_u_distance}) variable V0_metal equal 173009.006140434/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 173009.006140434*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 173009.006140434 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 333.15*${_u_temperature} variable temp_converted equal 333.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 333.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "333.15 - 0.2" variable T_up equal "333.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 16.0067 ghost atom cutoff = 16.0067 binsize = 8.00335, bins = 7 7 7 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 16.0067 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.434 | 9.434 | 9.434 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -7156.606 -7156.606 -7328.815 -7328.815 333.15 333.15 173009.01 173009.01 1063.1748 1063.1748 1000 -6966.4234 -6966.4234 -7141.4473 -7141.4473 338.59552 338.59552 177440.17 177440.17 -303.21935 -303.21935 Loop time of 124.984 on 1 procs for 1000 steps with 4000 atoms Performance: 0.691 ns/day, 34.718 hours/ns, 8.001 timesteps/s 38.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.94 | 122.94 | 122.94 | 0.0 | 98.36 Neigh | 1.3073 | 1.3073 | 1.3073 | 0.0 | 1.05 Comm | 0.20504 | 0.20504 | 0.20504 | 0.0 | 0.16 Output | 5.1022e-05 | 5.1022e-05 | 5.1022e-05 | 0.0 | 0.00 Modify | 0.48994 | 0.48994 | 0.48994 | 0.0 | 0.39 Other | | 0.04265 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51445e+06 ave 1.51445e+06 max 1.51445e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1514454 Ave neighs/atom = 378.613 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -6966.4234 -6966.4234 -7141.4473 -7141.4473 338.59552 338.59552 177440.17 177440.17 -303.21935 -303.21935 2000 -6988.8753 -6988.8753 -7153.8434 -7153.8434 319.14202 319.14202 176741.25 176741.25 61.170306 61.170306 Loop time of 131.255 on 1 procs for 1000 steps with 4000 atoms Performance: 0.658 ns/day, 36.460 hours/ns, 7.619 timesteps/s 36.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 128.9 | 128.9 | 128.9 | 0.0 | 98.20 Neigh | 1.3916 | 1.3916 | 1.3916 | 0.0 | 1.06 Comm | 0.27146 | 0.27146 | 0.27146 | 0.0 | 0.21 Output | 5.9128e-05 | 5.9128e-05 | 5.9128e-05 | 0.0 | 0.00 Modify | 0.63101 | 0.63101 | 0.63101 | 0.0 | 0.48 Other | | 0.06388 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51674e+06 ave 1.51674e+06 max 1.51674e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1516736 Ave neighs/atom = 379.184 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -6988.8753 -6988.8753 -7153.8434 -7153.8434 319.14202 319.14202 176741.25 176741.25 61.170306 61.170306 3000 -6968.809 -6968.809 -7145.3418 -7145.3418 341.51451 341.51451 176991.16 176991.16 52.379031 52.379031 Loop time of 125.668 on 1 procs for 1000 steps with 4000 atoms Performance: 0.688 ns/day, 34.908 hours/ns, 7.957 timesteps/s 37.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.26 | 123.26 | 123.26 | 0.0 | 98.09 Neigh | 1.375 | 1.375 | 1.375 | 0.0 | 1.09 Comm | 0.2741 | 0.2741 | 0.2741 | 0.0 | 0.22 Output | 6.1035e-05 | 6.1035e-05 | 6.1035e-05 | 0.0 | 0.00 Modify | 0.70379 | 0.70379 | 0.70379 | 0.0 | 0.56 Other | | 0.05274 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51572e+06 ave 1.51572e+06 max 1.51572e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1515724 Ave neighs/atom = 378.931 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -6968.809 -6968.809 -7145.3418 -7145.3418 341.51451 341.51451 176991.16 176991.16 52.379031 52.379031 4000 -6982.2129 -6982.2129 -7152.2839 -7152.2839 329.01386 329.01386 176963.99 176963.99 -80.927063 -80.927063 Loop time of 119.209 on 1 procs for 1000 steps with 4000 atoms Performance: 0.725 ns/day, 33.114 hours/ns, 8.389 timesteps/s 40.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 117.18 | 117.18 | 117.18 | 0.0 | 98.30 Neigh | 1.1864 | 1.1864 | 1.1864 | 0.0 | 1.00 Comm | 0.21572 | 0.21572 | 0.21572 | 0.0 | 0.18 Output | 5.0068e-05 | 5.0068e-05 | 5.0068e-05 | 0.0 | 0.00 Modify | 0.57427 | 0.57427 | 0.57427 | 0.0 | 0.48 Other | | 0.05528 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51593e+06 ave 1.51593e+06 max 1.51593e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1515934 Ave neighs/atom = 378.983 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -6982.2129 -6982.2129 -7152.2839 -7152.2839 329.01386 329.01386 176963.99 176963.99 -80.927063 -80.927063 5000 -6977.9333 -6977.9333 -7151.1268 -7151.1268 335.05464 335.05464 176757.9 176757.9 149.43141 149.43141 Loop time of 116.992 on 1 procs for 1000 steps with 4000 atoms Performance: 0.739 ns/day, 32.498 hours/ns, 8.548 timesteps/s 40.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.99 | 114.99 | 114.99 | 0.0 | 98.29 Neigh | 1.1133 | 1.1133 | 1.1133 | 0.0 | 0.95 Comm | 0.22762 | 0.22762 | 0.22762 | 0.0 | 0.19 Output | 3.8147e-05 | 3.8147e-05 | 3.8147e-05 | 0.0 | 0.00 Modify | 0.54318 | 0.54318 | 0.54318 | 0.0 | 0.46 Other | | 0.1149 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51627e+06 ave 1.51627e+06 max 1.51627e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1516268 Ave neighs/atom = 379.067 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 337.752756559723, Press = 31.5262383852112 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -6977.9333 -6977.9333 -7151.1268 -7151.1268 335.05464 335.05464 176757.9 176757.9 149.43141 149.43141 6000 -6974.3867 -6974.3867 -7148.6136 -7148.6136 337.05366 337.05366 177185.72 177185.72 -200.46557 -200.46557 Loop time of 120.502 on 1 procs for 1000 steps with 4000 atoms Performance: 0.717 ns/day, 33.473 hours/ns, 8.299 timesteps/s 39.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 118.39 | 118.39 | 118.39 | 0.0 | 98.25 Neigh | 1.1801 | 1.1801 | 1.1801 | 0.0 | 0.98 Comm | 0.17984 | 0.17984 | 0.17984 | 0.0 | 0.15 Output | 3.8862e-05 | 3.8862e-05 | 3.8862e-05 | 0.0 | 0.00 Modify | 0.70324 | 0.70324 | 0.70324 | 0.0 | 0.58 Other | | 0.04813 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51491e+06 ave 1.51491e+06 max 1.51491e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1514906 Ave neighs/atom = 378.726 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.737266374903, Press = 11.6938223701761 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -6974.3867 -6974.3867 -7148.6136 -7148.6136 337.05366 337.05366 177185.72 177185.72 -200.46557 -200.46557 7000 -6979.3566 -6979.3566 -7153.2893 -7153.2893 336.48474 336.48474 176919.71 176919.71 -32.140068 -32.140068 Loop time of 129.527 on 1 procs for 1000 steps with 4000 atoms Performance: 0.667 ns/day, 35.980 hours/ns, 7.720 timesteps/s 36.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.23 | 127.23 | 127.23 | 0.0 | 98.23 Neigh | 1.1369 | 1.1369 | 1.1369 | 0.0 | 0.88 Comm | 0.22489 | 0.22489 | 0.22489 | 0.0 | 0.17 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.82647 | 0.82647 | 0.82647 | 0.0 | 0.64 Other | | 0.1036 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51378e+06 ave 1.51378e+06 max 1.51378e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1513776 Ave neighs/atom = 378.444 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.02691141723, Press = -7.27636192090485 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -6979.3566 -6979.3566 -7153.2893 -7153.2893 336.48474 336.48474 176919.71 176919.71 -32.140068 -32.140068 8000 -6971.8316 -6971.8316 -7147.0494 -7147.0494 338.97081 338.97081 176770.49 176770.49 199.86888 199.86888 Loop time of 123.287 on 1 procs for 1000 steps with 4000 atoms Performance: 0.701 ns/day, 34.246 hours/ns, 8.111 timesteps/s 39.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 121.12 | 121.12 | 121.12 | 0.0 | 98.24 Neigh | 1.2012 | 1.2012 | 1.2012 | 0.0 | 0.97 Comm | 0.23139 | 0.23139 | 0.23139 | 0.0 | 0.19 Output | 3.7193e-05 | 3.7193e-05 | 3.7193e-05 | 0.0 | 0.00 Modify | 0.63314 | 0.63314 | 0.63314 | 0.0 | 0.51 Other | | 0.1057 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51644e+06 ave 1.51644e+06 max 1.51644e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1516436 Ave neighs/atom = 379.109 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.684553668243, Press = 5.00930137542848 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -6971.8316 -6971.8316 -7147.0494 -7147.0494 338.97081 338.97081 176770.49 176770.49 199.86888 199.86888 9000 -6981.4668 -6981.4668 -7149.0502 -7149.0502 324.20138 324.20138 177124.52 177124.52 -193.57232 -193.57232 Loop time of 116.593 on 1 procs for 1000 steps with 4000 atoms Performance: 0.741 ns/day, 32.387 hours/ns, 8.577 timesteps/s 40.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.72 | 114.72 | 114.72 | 0.0 | 98.40 Neigh | 0.98627 | 0.98627 | 0.98627 | 0.0 | 0.85 Comm | 0.28913 | 0.28913 | 0.28913 | 0.0 | 0.25 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.53775 | 0.53775 | 0.53775 | 0.0 | 0.46 Other | | 0.05525 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51556e+06 ave 1.51556e+06 max 1.51556e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1515564 Ave neighs/atom = 378.891 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.446752665054, Press = 0.219089818929455 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -6981.4668 -6981.4668 -7149.0502 -7149.0502 324.20138 324.20138 177124.52 177124.52 -193.57232 -193.57232 10000 -6972.0397 -6972.0397 -7147.7107 -7147.7107 339.84739 339.84739 176903.07 176903.07 76.378977 76.378977 Loop time of 110.731 on 1 procs for 1000 steps with 4000 atoms Performance: 0.780 ns/day, 30.759 hours/ns, 9.031 timesteps/s 42.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 108.87 | 108.87 | 108.87 | 0.0 | 98.32 Neigh | 0.89182 | 0.89182 | 0.89182 | 0.0 | 0.81 Comm | 0.1715 | 0.1715 | 0.1715 | 0.0 | 0.15 Output | 4.8161e-05 | 4.8161e-05 | 4.8161e-05 | 0.0 | 0.00 Modify | 0.67731 | 0.67731 | 0.67731 | 0.0 | 0.61 Other | | 0.1219 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51602e+06 ave 1.51602e+06 max 1.51602e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1516020 Ave neighs/atom = 379.005 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.580037133999, Press = 0.227731267504535 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -6972.0397 -6972.0397 -7147.7107 -7147.7107 339.84739 339.84739 176903.07 176903.07 76.378977 76.378977 11000 -6979.9064 -6979.9064 -7150.0232 -7150.0232 329.10234 329.10234 176967.36 176967.36 -48.995942 -48.995942 Loop time of 106.587 on 1 procs for 1000 steps with 4000 atoms Performance: 0.811 ns/day, 29.608 hours/ns, 9.382 timesteps/s 44.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 104.78 | 104.78 | 104.78 | 0.0 | 98.30 Neigh | 0.90655 | 0.90655 | 0.90655 | 0.0 | 0.85 Comm | 0.2901 | 0.2901 | 0.2901 | 0.0 | 0.27 Output | 4.9114e-05 | 4.9114e-05 | 4.9114e-05 | 0.0 | 0.00 Modify | 0.58593 | 0.58593 | 0.58593 | 0.0 | 0.55 Other | | 0.02904 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51622e+06 ave 1.51622e+06 max 1.51622e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1516216 Ave neighs/atom = 379.054 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.73224225062, Press = 1.08370685020375 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -6979.9064 -6979.9064 -7150.0232 -7150.0232 329.10234 329.10234 176967.36 176967.36 -48.995942 -48.995942 12000 -6972.1872 -6972.1872 -7148.0896 -7148.0896 340.29523 340.29523 176987.54 176987.54 -5.9847343 -5.9847343 Loop time of 106.608 on 1 procs for 1000 steps with 4000 atoms Performance: 0.810 ns/day, 29.613 hours/ns, 9.380 timesteps/s 44.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 104.75 | 104.75 | 104.75 | 0.0 | 98.26 Neigh | 1.0673 | 1.0673 | 1.0673 | 0.0 | 1.00 Comm | 0.22703 | 0.22703 | 0.22703 | 0.0 | 0.21 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.46527 | 0.46527 | 0.46527 | 0.0 | 0.44 Other | | 0.09997 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51614e+06 ave 1.51614e+06 max 1.51614e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1516140 Ave neighs/atom = 379.035 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.872662205477, Press = 0.0783038134406907 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -6972.1872 -6972.1872 -7148.0896 -7148.0896 340.29523 340.29523 176987.54 176987.54 -5.9847343 -5.9847343 13000 -6982.8787 -6982.8787 -7151.607 -7151.607 326.41646 326.41646 176812.01 176812.01 61.309081 61.309081 Loop time of 104.693 on 1 procs for 1000 steps with 4000 atoms Performance: 0.825 ns/day, 29.081 hours/ns, 9.552 timesteps/s 45.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 103.02 | 103.02 | 103.02 | 0.0 | 98.40 Neigh | 0.90106 | 0.90106 | 0.90106 | 0.0 | 0.86 Comm | 0.15408 | 0.15408 | 0.15408 | 0.0 | 0.15 Output | 4.8161e-05 | 4.8161e-05 | 4.8161e-05 | 0.0 | 0.00 Modify | 0.51225 | 0.51225 | 0.51225 | 0.0 | 0.49 Other | | 0.11 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51679e+06 ave 1.51679e+06 max 1.51679e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1516786 Ave neighs/atom = 379.197 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.729916224123, Press = 0.869673617691332 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -6982.8787 -6982.8787 -7151.607 -7151.607 326.41646 326.41646 176812.01 176812.01 61.309081 61.309081 14000 -6979.2147 -6979.2147 -7148.5049 -7148.5049 327.50333 327.50333 177047.77 177047.77 -106.33136 -106.33136 Loop time of 95.3477 on 1 procs for 1000 steps with 4000 atoms Performance: 0.906 ns/day, 26.485 hours/ns, 10.488 timesteps/s 49.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 93.947 | 93.947 | 93.947 | 0.0 | 98.53 Neigh | 0.78869 | 0.78869 | 0.78869 | 0.0 | 0.83 Comm | 0.18907 | 0.18907 | 0.18907 | 0.0 | 0.20 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.38125 | 0.38125 | 0.38125 | 0.0 | 0.40 Other | | 0.04118 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51637e+06 ave 1.51637e+06 max 1.51637e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1516370 Ave neighs/atom = 379.092 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.645985650516, Press = 0.681727553045714 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -6979.2147 -6979.2147 -7148.5049 -7148.5049 327.50333 327.50333 177047.77 177047.77 -106.33136 -106.33136 15000 -6974.2514 -6974.2514 -7145.8792 -7145.8792 332.0257 332.0257 176859.87 176859.87 107.44548 107.44548 Loop time of 88.8893 on 1 procs for 1000 steps with 4000 atoms Performance: 0.972 ns/day, 24.691 hours/ns, 11.250 timesteps/s 53.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 87.378 | 87.378 | 87.378 | 0.0 | 98.30 Neigh | 0.79017 | 0.79017 | 0.79017 | 0.0 | 0.89 Comm | 0.16226 | 0.16226 | 0.16226 | 0.0 | 0.18 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.49916 | 0.49916 | 0.49916 | 0.0 | 0.56 Other | | 0.05991 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51612e+06 ave 1.51612e+06 max 1.51612e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1516122 Ave neighs/atom = 379.031 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.657770383232, Press = -0.996042022217215 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -6974.2514 -6974.2514 -7145.8792 -7145.8792 332.0257 332.0257 176859.87 176859.87 107.44548 107.44548 16000 -6975.7529 -6975.7529 -7148.9437 -7148.9437 335.04926 335.04926 176825.95 176825.95 113.19608 113.19608 Loop time of 74.0793 on 1 procs for 1000 steps with 4000 atoms Performance: 1.166 ns/day, 20.578 hours/ns, 13.499 timesteps/s 63.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 72.88 | 72.88 | 72.88 | 0.0 | 98.38 Neigh | 0.61012 | 0.61012 | 0.61012 | 0.0 | 0.82 Comm | 0.15523 | 0.15523 | 0.15523 | 0.0 | 0.21 Output | 6.1035e-05 | 6.1035e-05 | 6.1035e-05 | 0.0 | 0.00 Modify | 0.3918 | 0.3918 | 0.3918 | 0.0 | 0.53 Other | | 0.04172 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51772e+06 ave 1.51772e+06 max 1.51772e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1517718 Ave neighs/atom = 379.43 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.573131849607, Press = 1.81046115566479 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -6975.7529 -6975.7529 -7148.9437 -7148.9437 335.04926 335.04926 176825.95 176825.95 113.19608 113.19608 17000 -6978.921 -6978.921 -7149.9433 -7149.9433 330.85418 330.85418 177213.07 177213.07 -261.6984 -261.6984 Loop time of 79.6626 on 1 procs for 1000 steps with 4000 atoms Performance: 1.085 ns/day, 22.128 hours/ns, 12.553 timesteps/s 60.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 78.361 | 78.361 | 78.361 | 0.0 | 98.37 Neigh | 0.76582 | 0.76582 | 0.76582 | 0.0 | 0.96 Comm | 0.15579 | 0.15579 | 0.15579 | 0.0 | 0.20 Output | 6.1035e-05 | 6.1035e-05 | 6.1035e-05 | 0.0 | 0.00 Modify | 0.30671 | 0.30671 | 0.30671 | 0.0 | 0.39 Other | | 0.0728 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51439e+06 ave 1.51439e+06 max 1.51439e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1514386 Ave neighs/atom = 378.596 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.572348543385, Press = -0.473704251974288 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -6978.921 -6978.921 -7149.9433 -7149.9433 330.85418 330.85418 177213.07 177213.07 -261.6984 -261.6984 18000 -6976.242 -6976.242 -7148.2688 -7148.2688 332.79744 332.79744 176509.62 176509.62 392.61495 392.61495 Loop time of 74.1555 on 1 procs for 1000 steps with 4000 atoms Performance: 1.165 ns/day, 20.599 hours/ns, 13.485 timesteps/s 63.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 72.89 | 72.89 | 72.89 | 0.0 | 98.29 Neigh | 0.66536 | 0.66536 | 0.66536 | 0.0 | 0.90 Comm | 0.16262 | 0.16262 | 0.16262 | 0.0 | 0.22 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.37801 | 0.37801 | 0.37801 | 0.0 | 0.51 Other | | 0.05913 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51808e+06 ave 1.51808e+06 max 1.51808e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1518080 Ave neighs/atom = 379.52 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.59155373326, Press = -0.021030396162731 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -6976.242 -6976.242 -7148.2688 -7148.2688 332.79744 332.79744 176509.62 176509.62 392.61495 392.61495 19000 -6979.4236 -6979.4236 -7149.7605 -7149.7605 329.52832 329.52832 177217.81 177217.81 -257.75325 -257.75325 Loop time of 70.9623 on 1 procs for 1000 steps with 4000 atoms Performance: 1.218 ns/day, 19.712 hours/ns, 14.092 timesteps/s 67.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.713 | 69.713 | 69.713 | 0.0 | 98.24 Neigh | 0.64635 | 0.64635 | 0.64635 | 0.0 | 0.91 Comm | 0.17729 | 0.17729 | 0.17729 | 0.0 | 0.25 Output | 6.1035e-05 | 6.1035e-05 | 6.1035e-05 | 0.0 | 0.00 Modify | 0.37563 | 0.37563 | 0.37563 | 0.0 | 0.53 Other | | 0.05031 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51555e+06 ave 1.51555e+06 max 1.51555e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1515548 Ave neighs/atom = 378.887 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.527685000942, Press = 1.47293156240213 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -6979.4236 -6979.4236 -7149.7605 -7149.7605 329.52832 329.52832 177217.81 177217.81 -257.75325 -257.75325 20000 -6972.1187 -6972.1187 -7149.2111 -7149.2111 342.5972 342.5972 177048.06 177048.06 -67.398117 -67.398117 Loop time of 76.3814 on 1 procs for 1000 steps with 4000 atoms Performance: 1.131 ns/day, 21.217 hours/ns, 13.092 timesteps/s 62.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 75.23 | 75.23 | 75.23 | 0.0 | 98.49 Neigh | 0.55922 | 0.55922 | 0.55922 | 0.0 | 0.73 Comm | 0.16818 | 0.16818 | 0.16818 | 0.0 | 0.22 Output | 3.7193e-05 | 3.7193e-05 | 3.7193e-05 | 0.0 | 0.00 Modify | 0.38191 | 0.38191 | 0.38191 | 0.0 | 0.50 Other | | 0.0419 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51515e+06 ave 1.51515e+06 max 1.51515e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1515148 Ave neighs/atom = 378.787 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.531670631855, Press = -0.447975984430989 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -6972.1187 -6972.1187 -7149.2111 -7149.2111 342.5972 342.5972 177048.06 177048.06 -67.398117 -67.398117 21000 -6979.547 -6979.547 -7151.2484 -7151.2484 332.16798 332.16798 176813.02 176813.02 81.337232 81.337232 Loop time of 71.6566 on 1 procs for 1000 steps with 4000 atoms Performance: 1.206 ns/day, 19.905 hours/ns, 13.955 timesteps/s 67.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 70.394 | 70.394 | 70.394 | 0.0 | 98.24 Neigh | 0.67477 | 0.67477 | 0.67477 | 0.0 | 0.94 Comm | 0.17998 | 0.17998 | 0.17998 | 0.0 | 0.25 Output | 3.7193e-05 | 3.7193e-05 | 3.7193e-05 | 0.0 | 0.00 Modify | 0.37836 | 0.37836 | 0.37836 | 0.0 | 0.53 Other | | 0.02931 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51618e+06 ave 1.51618e+06 max 1.51618e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1516182 Ave neighs/atom = 379.046 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.5897566625, Press = 0.526391924286473 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -6979.547 -6979.547 -7151.2484 -7151.2484 332.16798 332.16798 176813.02 176813.02 81.337232 81.337232 22000 -6973.3221 -6973.3221 -7148.6017 -7148.6017 339.09032 339.09032 177156.27 177156.27 -154.88381 -154.88381 Loop time of 78.3236 on 1 procs for 1000 steps with 4000 atoms Performance: 1.103 ns/day, 21.757 hours/ns, 12.768 timesteps/s 60.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 76.943 | 76.943 | 76.943 | 0.0 | 98.24 Neigh | 0.76961 | 0.76961 | 0.76961 | 0.0 | 0.98 Comm | 0.16178 | 0.16178 | 0.16178 | 0.0 | 0.21 Output | 3.7909e-05 | 3.7909e-05 | 3.7909e-05 | 0.0 | 0.00 Modify | 0.39383 | 0.39383 | 0.39383 | 0.0 | 0.50 Other | | 0.05501 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51567e+06 ave 1.51567e+06 max 1.51567e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1515670 Ave neighs/atom = 378.918 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.601738302709, Press = 0.201794533624525 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -6973.3221 -6973.3221 -7148.6017 -7148.6017 339.09032 339.09032 177156.27 177156.27 -154.88381 -154.88381 23000 -6979.2711 -6979.2711 -7150.2351 -7150.2351 330.74147 330.74147 176759.33 176759.33 151.22013 151.22013 Loop time of 71.4848 on 1 procs for 1000 steps with 4000 atoms Performance: 1.209 ns/day, 19.857 hours/ns, 13.989 timesteps/s 65.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 70.358 | 70.358 | 70.358 | 0.0 | 98.42 Neigh | 0.61464 | 0.61464 | 0.61464 | 0.0 | 0.86 Comm | 0.16032 | 0.16032 | 0.16032 | 0.0 | 0.22 Output | 4.8161e-05 | 4.8161e-05 | 4.8161e-05 | 0.0 | 0.00 Modify | 0.30482 | 0.30482 | 0.30482 | 0.0 | 0.43 Other | | 0.04687 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51576e+06 ave 1.51576e+06 max 1.51576e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1515758 Ave neighs/atom = 378.94 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.498302840801, Press = -0.303480972744243 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -6979.2711 -6979.2711 -7150.2351 -7150.2351 330.74147 330.74147 176759.33 176759.33 151.22013 151.22013 24000 -6974.2118 -6974.2118 -7147.8808 -7147.8808 335.97438 335.97438 176963.01 176963.01 8.0359823 8.0359823 Loop time of 73.6163 on 1 procs for 1000 steps with 4000 atoms Performance: 1.174 ns/day, 20.449 hours/ns, 13.584 timesteps/s 64.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 72.372 | 72.372 | 72.372 | 0.0 | 98.31 Neigh | 0.71333 | 0.71333 | 0.71333 | 0.0 | 0.97 Comm | 0.14601 | 0.14601 | 0.14601 | 0.0 | 0.20 Output | 4.3869e-05 | 4.3869e-05 | 4.3869e-05 | 0.0 | 0.00 Modify | 0.35525 | 0.35525 | 0.35525 | 0.0 | 0.48 Other | | 0.0292 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51975e+06 ave 1.51975e+06 max 1.51975e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1519752 Ave neighs/atom = 379.938 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.399329433791, Press = 1.61613097969925 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -6974.2118 -6974.2118 -7147.8808 -7147.8808 335.97438 335.97438 176963.01 176963.01 8.0359823 8.0359823 25000 -6980.1183 -6980.1183 -7150.6374 -7150.6374 329.88082 329.88082 177134.47 177134.47 -203.04511 -203.04511 Loop time of 69.361 on 1 procs for 1000 steps with 4000 atoms Performance: 1.246 ns/day, 19.267 hours/ns, 14.417 timesteps/s 68.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.255 | 68.255 | 68.255 | 0.0 | 98.41 Neigh | 0.6092 | 0.6092 | 0.6092 | 0.0 | 0.88 Comm | 0.18121 | 0.18121 | 0.18121 | 0.0 | 0.26 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.28661 | 0.28661 | 0.28661 | 0.0 | 0.41 Other | | 0.02872 | | | 0.04 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51422e+06 ave 1.51422e+06 max 1.51422e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1514216 Ave neighs/atom = 378.554 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.362604837148, Press = -0.308006695999011 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -6980.1183 -6980.1183 -7150.6374 -7150.6374 329.88082 329.88082 177134.47 177134.47 -203.04511 -203.04511 26000 -6976.5762 -6976.5762 -7150.4614 -7150.4614 336.39262 336.39262 176697.36 176697.36 205.93842 205.93842 Loop time of 62.7171 on 1 procs for 1000 steps with 4000 atoms Performance: 1.378 ns/day, 17.421 hours/ns, 15.945 timesteps/s 76.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 61.669 | 61.669 | 61.669 | 0.0 | 98.33 Neigh | 0.53502 | 0.53502 | 0.53502 | 0.0 | 0.85 Comm | 0.17077 | 0.17077 | 0.17077 | 0.0 | 0.27 Output | 4.7922e-05 | 4.7922e-05 | 4.7922e-05 | 0.0 | 0.00 Modify | 0.31382 | 0.31382 | 0.31382 | 0.0 | 0.50 Other | | 0.02883 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51515e+06 ave 1.51515e+06 max 1.51515e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1515152 Ave neighs/atom = 378.788 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.313953843359, Press = 0.235801790204877 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 26000 -6976.5762 -6976.5762 -7150.4614 -7150.4614 336.39262 336.39262 176697.36 176697.36 205.93842 205.93842 27000 -6976.1098 -6976.1098 -7149.4017 -7149.4017 335.24492 335.24492 177139.12 177139.12 -170.9643 -170.9643 Loop time of 60.841 on 1 procs for 1000 steps with 4000 atoms Performance: 1.420 ns/day, 16.900 hours/ns, 16.436 timesteps/s 77.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 59.759 | 59.759 | 59.759 | 0.0 | 98.22 Neigh | 0.57399 | 0.57399 | 0.57399 | 0.0 | 0.94 Comm | 0.14011 | 0.14011 | 0.14011 | 0.0 | 0.23 Output | 4.7922e-05 | 4.7922e-05 | 4.7922e-05 | 0.0 | 0.00 Modify | 0.31281 | 0.31281 | 0.31281 | 0.0 | 0.51 Other | | 0.05482 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51614e+06 ave 1.51614e+06 max 1.51614e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1516142 Ave neighs/atom = 379.036 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.266139385823, Press = 0.343441129886816 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 9.438 | 9.438 | 9.438 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 27000 -6976.1098 -6976.1098 -7149.4017 -7149.4017 335.24492 335.24492 177139.12 177139.12 -170.9643 -170.9643 28000 -6981.3442 -6981.3442 -7151.8972 -7151.8972 329.94636 329.94636 176861.41 176861.41 18.014262 18.014262 Loop time of 62.086 on 1 procs for 1000 steps with 4000 atoms Performance: 1.392 ns/day, 17.246 hours/ns, 16.107 timesteps/s 76.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.999 | 60.999 | 60.999 | 0.0 | 98.25 Neigh | 0.63525 | 0.63525 | 0.63525 | 0.0 | 1.02 Comm | 0.15056 | 0.15056 | 0.15056 | 0.0 | 0.24 Output | 4.8876e-05 | 4.8876e-05 | 4.8876e-05 | 0.0 | 0.00 Modify | 0.27178 | 0.27178 | 0.27178 | 0.0 | 0.44 Other | | 0.02912 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10895 ave 10895 max 10895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.51632e+06 ave 1.51632e+06 max 1.51632e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1516322 Ave neighs/atom = 379.08 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T333.15.out" else "print 'not_converged' file output/vol_T333.15.out" print '${V}' file output/vol_T333.15.out 176928.326369524 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0