# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.525483399629593*${_u_distance} variable latticeconst_converted equal 4.525483399629593*1 lattice fcc ${latticeconst_converted} lattice fcc 4.52548339962959 Lattice spacing in x,y,z = 4.5254834 4.5254834 4.5254834 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (45.254834 45.254834 45.254834) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.001 seconds variable mass_converted equal 40.078*${_u_mass} variable mass_converted equal 40.078*1 kim_interactions Ca #=== BEGIN kim_interactions ================================== pair_style kim MEAM_LAMMPS_KimJeonLee_2015_MgCa__MO_611309973581_000 pair_coeff * * Ca #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 40.078 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 92681.9000258757 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 92681.9000258757/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 92681.9000258757/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 92681.9000258757/(1*1*${_u_distance}) variable V0_metal equal 92681.9000258757/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 92681.9000258757*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 92681.9000258757 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 9 ghost atom cutoff = 9 binsize = 4.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 9 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 5.370 | 5.370 | 5.370 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -6038.1292 -6038.1292 -6200 -6200 313.15 313.15 92681.9 92681.9 1865.4866 1865.4866 1000 -5876.3028 -5876.3028 -6039.8647 -6039.8647 316.42151 316.42151 95269.968 95269.968 -422.23268 -422.23268 Loop time of 193.283 on 1 procs for 1000 steps with 4000 atoms Performance: 0.447 ns/day, 53.690 hours/ns, 5.174 timesteps/s 69.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 192.82 | 192.82 | 192.82 | 0.0 | 99.76 Neigh | 0.16788 | 0.16788 | 0.16788 | 0.0 | 0.09 Comm | 0.042753 | 0.042753 | 0.042753 | 0.0 | 0.02 Output | 7.03e-05 | 7.03e-05 | 7.03e-05 | 0.0 | 0.00 Modify | 0.21606 | 0.21606 | 0.21606 | 0.0 | 0.11 Other | | 0.0384 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6321.00 ave 6321 max 6321 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539280.0 ave 539280 max 539280 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539280 Ave neighs/atom = 134.82000 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -5876.3028 -5876.3028 -6039.8647 -6039.8647 316.42151 316.42151 95269.968 95269.968 -422.23268 -422.23268 2000 -5887.8034 -5887.8034 -6049.7566 -6049.7566 313.30942 313.30942 95033.412 95033.412 -58.1426 -58.1426 Loop time of 185.662 on 1 procs for 1000 steps with 4000 atoms Performance: 0.465 ns/day, 51.573 hours/ns, 5.386 timesteps/s 73.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 185.16 | 185.16 | 185.16 | 0.0 | 99.73 Neigh | 0.18371 | 0.18371 | 0.18371 | 0.0 | 0.10 Comm | 0.044118 | 0.044118 | 0.044118 | 0.0 | 0.02 Output | 4.4e-05 | 4.4e-05 | 4.4e-05 | 0.0 | 0.00 Modify | 0.26108 | 0.26108 | 0.26108 | 0.0 | 0.14 Other | | 0.01815 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6417.00 ave 6417 max 6417 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539538.0 ave 539538 max 539538 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539538 Ave neighs/atom = 134.88450 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -5887.8034 -5887.8034 -6049.7566 -6049.7566 313.30942 313.30942 95033.412 95033.412 -58.1426 -58.1426 3000 -5874.2062 -5874.2062 -6041.3685 -6041.3685 323.38688 323.38688 95122.74 95122.74 13.663814 13.663814 Loop time of 177.534 on 1 procs for 1000 steps with 4000 atoms Performance: 0.487 ns/day, 49.315 hours/ns, 5.633 timesteps/s 77.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 177.08 | 177.08 | 177.08 | 0.0 | 99.75 Neigh | 0.15226 | 0.15226 | 0.15226 | 0.0 | 0.09 Comm | 0.062883 | 0.062883 | 0.062883 | 0.0 | 0.04 Output | 6.19e-05 | 6.19e-05 | 6.19e-05 | 0.0 | 0.00 Modify | 0.21716 | 0.21716 | 0.21716 | 0.0 | 0.12 Other | | 0.0183 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6377.00 ave 6377 max 6377 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539140.0 ave 539140 max 539140 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539140 Ave neighs/atom = 134.78500 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -5874.2062 -5874.2062 -6041.3685 -6041.3685 323.38688 323.38688 95122.74 95122.74 13.663814 13.663814 4000 -5886.6397 -5886.6397 -6046.8423 -6046.8423 309.92292 309.92292 95073.54 95073.54 -81.584453 -81.584453 Loop time of 164.821 on 1 procs for 1000 steps with 4000 atoms Performance: 0.524 ns/day, 45.784 hours/ns, 6.067 timesteps/s 83.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 164.39 | 164.39 | 164.39 | 0.0 | 99.74 Neigh | 0.16181 | 0.16181 | 0.16181 | 0.0 | 0.10 Comm | 0.063084 | 0.063084 | 0.063084 | 0.0 | 0.04 Output | 4.91e-05 | 4.91e-05 | 4.91e-05 | 0.0 | 0.00 Modify | 0.1862 | 0.1862 | 0.1862 | 0.0 | 0.11 Other | | 0.01824 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6300.00 ave 6300 max 6300 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539608.0 ave 539608 max 539608 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539608 Ave neighs/atom = 134.90200 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -5886.6397 -5886.6397 -6046.8423 -6046.8423 309.92292 309.92292 95073.54 95073.54 -81.584453 -81.584453 5000 -5877.4469 -5877.4469 -6040.8781 -6040.8781 316.16881 316.16881 95161.76 95161.76 -138.87571 -138.87571 Loop time of 170.608 on 1 procs for 1000 steps with 4000 atoms Performance: 0.506 ns/day, 47.391 hours/ns, 5.861 timesteps/s 80.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 170.15 | 170.15 | 170.15 | 0.0 | 99.73 Neigh | 0.19259 | 0.19259 | 0.19259 | 0.0 | 0.11 Comm | 0.04319 | 0.04319 | 0.04319 | 0.0 | 0.03 Output | 2.89e-05 | 2.89e-05 | 2.89e-05 | 0.0 | 0.00 Modify | 0.20014 | 0.20014 | 0.20014 | 0.0 | 0.12 Other | | 0.01837 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6331.00 ave 6331 max 6331 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 538836.0 ave 538836 max 538836 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 538836 Ave neighs/atom = 134.70900 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 314.821231637244, Press = -244.517305993647 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -5877.4469 -5877.4469 -6040.8781 -6040.8781 316.16881 316.16881 95161.76 95161.76 -138.87571 -138.87571 6000 -5884.205 -5884.205 -6043.4032 -6043.4032 307.97987 307.97987 94916.298 94916.298 532.54919 532.54919 Loop time of 172.942 on 1 procs for 1000 steps with 4000 atoms Performance: 0.500 ns/day, 48.040 hours/ns, 5.782 timesteps/s 79.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 172.43 | 172.43 | 172.43 | 0.0 | 99.70 Neigh | 0.19088 | 0.19088 | 0.19088 | 0.0 | 0.11 Comm | 0.063214 | 0.063214 | 0.063214 | 0.0 | 0.04 Output | 3.67e-05 | 3.67e-05 | 3.67e-05 | 0.0 | 0.00 Modify | 0.24343 | 0.24343 | 0.24343 | 0.0 | 0.14 Other | | 0.01833 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6378.00 ave 6378 max 6378 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539882.0 ave 539882 max 539882 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539882 Ave neighs/atom = 134.97050 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.456151916949, Press = -5.98643367293109 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -5884.205 -5884.205 -6043.4032 -6043.4032 307.97987 307.97987 94916.298 94916.298 532.54919 532.54919 7000 -5877.7877 -5877.7877 -6039.8058 -6039.8058 313.43504 313.43504 95291.095 95291.095 -525.58836 -525.58836 Loop time of 172.329 on 1 procs for 1000 steps with 4000 atoms Performance: 0.501 ns/day, 47.869 hours/ns, 5.803 timesteps/s 79.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 171.74 | 171.74 | 171.74 | 0.0 | 99.66 Neigh | 0.22449 | 0.22449 | 0.22449 | 0.0 | 0.13 Comm | 0.043121 | 0.043121 | 0.043121 | 0.0 | 0.03 Output | 3.56e-05 | 3.56e-05 | 3.56e-05 | 0.0 | 0.00 Modify | 0.2988 | 0.2988 | 0.2988 | 0.0 | 0.17 Other | | 0.01815 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6370.00 ave 6370 max 6370 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539706.0 ave 539706 max 539706 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539706 Ave neighs/atom = 134.92650 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.162607995021, Press = 7.83258421774339 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -5877.7877 -5877.7877 -6039.8058 -6039.8058 313.43504 313.43504 95291.095 95291.095 -525.58836 -525.58836 8000 -5882.9192 -5882.9192 -6043.7898 -6043.7898 311.21493 311.21493 95127.039 95127.039 -122.74715 -122.74715 Loop time of 168.119 on 1 procs for 1000 steps with 4000 atoms Performance: 0.514 ns/day, 46.700 hours/ns, 5.948 timesteps/s 81.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 167.66 | 167.66 | 167.66 | 0.0 | 99.73 Neigh | 0.20536 | 0.20536 | 0.20536 | 0.0 | 0.12 Comm | 0.04485 | 0.04485 | 0.04485 | 0.0 | 0.03 Output | 3.3e-05 | 3.3e-05 | 3.3e-05 | 0.0 | 0.00 Modify | 0.18761 | 0.18761 | 0.18761 | 0.0 | 0.11 Other | | 0.01874 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6319.00 ave 6319 max 6319 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 538592.0 ave 538592 max 538592 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 538592 Ave neighs/atom = 134.64800 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.43336604479, Press = -14.3327226482855 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -5882.9192 -5882.9192 -6043.7898 -6043.7898 311.21493 311.21493 95127.039 95127.039 -122.74715 -122.74715 9000 -5879.0747 -5879.0747 -6043.7512 -6043.7512 318.57791 318.57791 94980.31 94980.31 342.22181 342.22181 Loop time of 169.353 on 1 procs for 1000 steps with 4000 atoms Performance: 0.510 ns/day, 47.043 hours/ns, 5.905 timesteps/s 81.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 168.84 | 168.84 | 168.84 | 0.0 | 99.70 Neigh | 0.22676 | 0.22676 | 0.22676 | 0.0 | 0.13 Comm | 0.063821 | 0.063821 | 0.063821 | 0.0 | 0.04 Output | 2.79e-05 | 2.79e-05 | 2.79e-05 | 0.0 | 0.00 Modify | 0.18452 | 0.18452 | 0.18452 | 0.0 | 0.11 Other | | 0.03817 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6358.00 ave 6358 max 6358 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539572.0 ave 539572 max 539572 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539572 Ave neighs/atom = 134.89300 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.201331619363, Press = 0.300634131370891 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -5879.0747 -5879.0747 -6043.7512 -6043.7512 318.57791 318.57791 94980.31 94980.31 342.22181 342.22181 10000 -5888.298 -5888.298 -6047.1127 -6047.1127 307.2379 307.2379 95087.105 95087.105 -142.13492 -142.13492 Loop time of 169.964 on 1 procs for 1000 steps with 4000 atoms Performance: 0.508 ns/day, 47.212 hours/ns, 5.884 timesteps/s 80.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 169.53 | 169.53 | 169.53 | 0.0 | 99.74 Neigh | 0.19055 | 0.19055 | 0.19055 | 0.0 | 0.11 Comm | 0.042716 | 0.042716 | 0.042716 | 0.0 | 0.03 Output | 3.37e-05 | 3.37e-05 | 3.37e-05 | 0.0 | 0.00 Modify | 0.18306 | 0.18306 | 0.18306 | 0.0 | 0.11 Other | | 0.01824 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6338.00 ave 6338 max 6338 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539380.0 ave 539380 max 539380 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539380 Ave neighs/atom = 134.84500 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.042513253473, Press = -1.9948840895668 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -5888.298 -5888.298 -6047.1127 -6047.1127 307.2379 307.2379 95087.105 95087.105 -142.13492 -142.13492 11000 -5877.4056 -5877.4056 -6039.985 -6039.985 314.52089 314.52089 95099.371 95099.371 44.562996 44.562996 Loop time of 223.974 on 1 procs for 1000 steps with 4000 atoms Performance: 0.386 ns/day, 62.215 hours/ns, 4.465 timesteps/s 61.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 223.43 | 223.43 | 223.43 | 0.0 | 99.76 Neigh | 0.25642 | 0.25642 | 0.25642 | 0.0 | 0.11 Comm | 0.043037 | 0.043037 | 0.043037 | 0.0 | 0.02 Output | 3.09e-05 | 3.09e-05 | 3.09e-05 | 0.0 | 0.00 Modify | 0.22292 | 0.22292 | 0.22292 | 0.0 | 0.10 Other | | 0.0181 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6296.00 ave 6296 max 6296 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 538990.0 ave 538990 max 538990 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 538990 Ave neighs/atom = 134.74750 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.966635642225, Press = -3.81860428784286 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -5877.4056 -5877.4056 -6039.985 -6039.985 314.52089 314.52089 95099.371 95099.371 44.562996 44.562996 12000 -5882.073 -5882.073 -6042.7963 -6042.7963 310.93008 310.93008 95099.525 95099.525 -11.490685 -11.490685 Loop time of 206.891 on 1 procs for 1000 steps with 4000 atoms Performance: 0.418 ns/day, 57.470 hours/ns, 4.833 timesteps/s 66.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 206.36 | 206.36 | 206.36 | 0.0 | 99.75 Neigh | 0.16139 | 0.16139 | 0.16139 | 0.0 | 0.08 Comm | 0.082948 | 0.082948 | 0.082948 | 0.0 | 0.04 Output | 3.53e-05 | 3.53e-05 | 3.53e-05 | 0.0 | 0.00 Modify | 0.26423 | 0.26423 | 0.26423 | 0.0 | 0.13 Other | | 0.01837 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6363.00 ave 6363 max 6363 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539548.0 ave 539548 max 539548 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539548 Ave neighs/atom = 134.88700 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.1783148652, Press = -0.394484493087269 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -5882.073 -5882.073 -6042.7963 -6042.7963 310.93008 310.93008 95099.525 95099.525 -11.490685 -11.490685 13000 -5880.4379 -5880.4379 -6046.2016 -6046.2016 320.68125 320.68125 95230.831 95230.831 -479.05004 -479.05004 Loop time of 215.672 on 1 procs for 1000 steps with 4000 atoms Performance: 0.401 ns/day, 59.909 hours/ns, 4.637 timesteps/s 63.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 215.17 | 215.17 | 215.17 | 0.0 | 99.76 Neigh | 0.1462 | 0.1462 | 0.1462 | 0.0 | 0.07 Comm | 0.065734 | 0.065734 | 0.065734 | 0.0 | 0.03 Output | 3.56e-05 | 3.56e-05 | 3.56e-05 | 0.0 | 0.00 Modify | 0.25696 | 0.25696 | 0.25696 | 0.0 | 0.12 Other | | 0.03835 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6408.00 ave 6408 max 6408 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539032.0 ave 539032 max 539032 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539032 Ave neighs/atom = 134.75800 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.178108758171, Press = -2.40393502513426 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -5880.4379 -5880.4379 -6046.2016 -6046.2016 320.68125 320.68125 95230.831 95230.831 -479.05004 -479.05004 14000 -5883.6064 -5883.6064 -6047.0593 -6047.0593 316.21077 316.21077 94881.167 94881.167 519.78466 519.78466 Loop time of 208.959 on 1 procs for 1000 steps with 4000 atoms Performance: 0.413 ns/day, 58.044 hours/ns, 4.786 timesteps/s 65.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 208.38 | 208.38 | 208.38 | 0.0 | 99.72 Neigh | 0.1567 | 0.1567 | 0.1567 | 0.0 | 0.07 Comm | 0.10075 | 0.10075 | 0.10075 | 0.0 | 0.05 Output | 3.72e-05 | 3.72e-05 | 3.72e-05 | 0.0 | 0.00 Modify | 0.28744 | 0.28744 | 0.28744 | 0.0 | 0.14 Other | | 0.03815 | | | 0.02 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6296.00 ave 6296 max 6296 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539164.0 ave 539164 max 539164 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539164 Ave neighs/atom = 134.79100 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.261675947769, Press = -2.8252588692858 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -5883.6064 -5883.6064 -6047.0593 -6047.0593 316.21077 316.21077 94881.167 94881.167 519.78466 519.78466 15000 -5882.8555 -5882.8555 -6045.0858 -6045.0858 313.84548 313.84548 95168.109 95168.109 -275.55811 -275.55811 Loop time of 214.451 on 1 procs for 1000 steps with 4000 atoms Performance: 0.403 ns/day, 59.570 hours/ns, 4.663 timesteps/s 63.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 213.97 | 213.97 | 213.97 | 0.0 | 99.77 Neigh | 0.18221 | 0.18221 | 0.18221 | 0.0 | 0.08 Comm | 0.083113 | 0.083113 | 0.083113 | 0.0 | 0.04 Output | 3.68e-05 | 3.68e-05 | 3.68e-05 | 0.0 | 0.00 Modify | 0.20207 | 0.20207 | 0.20207 | 0.0 | 0.09 Other | | 0.0185 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6302.00 ave 6302 max 6302 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539276.0 ave 539276 max 539276 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539276 Ave neighs/atom = 134.81900 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.057781441969, Press = 2.08999280419413 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -5882.8555 -5882.8555 -6045.0858 -6045.0858 313.84548 313.84548 95168.109 95168.109 -275.55811 -275.55811 16000 -5880.0137 -5880.0137 -6043.7393 -6043.7393 316.73839 316.73839 95197.065 95197.065 -274.18835 -274.18835 Loop time of 208.235 on 1 procs for 1000 steps with 4000 atoms Performance: 0.415 ns/day, 57.843 hours/ns, 4.802 timesteps/s 65.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 207.64 | 207.64 | 207.64 | 0.0 | 99.72 Neigh | 0.20403 | 0.20403 | 0.20403 | 0.0 | 0.10 Comm | 0.062942 | 0.062942 | 0.062942 | 0.0 | 0.03 Output | 2.92e-05 | 2.92e-05 | 2.92e-05 | 0.0 | 0.00 Modify | 0.26788 | 0.26788 | 0.26788 | 0.0 | 0.13 Other | | 0.05817 | | | 0.03 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6331.00 ave 6331 max 6331 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539010.0 ave 539010 max 539010 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539010 Ave neighs/atom = 134.75250 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.051048709315, Press = -2.31178802045395 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -5880.0137 -5880.0137 -6043.7393 -6043.7393 316.73839 316.73839 95197.065 95197.065 -274.18835 -274.18835 17000 -5880.2869 -5880.2869 -6044.8235 -6044.8235 318.30738 318.30738 95103.266 95103.266 -31.774321 -31.774321 Loop time of 207.636 on 1 procs for 1000 steps with 4000 atoms Performance: 0.416 ns/day, 57.677 hours/ns, 4.816 timesteps/s 65.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 207.2 | 207.2 | 207.2 | 0.0 | 99.79 Neigh | 0.17616 | 0.17616 | 0.17616 | 0.0 | 0.08 Comm | 0.042666 | 0.042666 | 0.042666 | 0.0 | 0.02 Output | 3.55e-05 | 3.55e-05 | 3.55e-05 | 0.0 | 0.00 Modify | 0.20138 | 0.20138 | 0.20138 | 0.0 | 0.10 Other | | 0.01801 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6277.00 ave 6277 max 6277 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539102.0 ave 539102 max 539102 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539102 Ave neighs/atom = 134.77550 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.031477158783, Press = -1.22468075803868 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -5880.2869 -5880.2869 -6044.8235 -6044.8235 318.30738 318.30738 95103.266 95103.266 -31.774321 -31.774321 18000 -5882.302 -5882.302 -6044.0559 -6044.0559 312.92386 312.92386 95043.261 95043.261 110.58949 110.58949 Loop time of 199.303 on 1 procs for 1000 steps with 4000 atoms Performance: 0.434 ns/day, 55.362 hours/ns, 5.017 timesteps/s 68.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 198.85 | 198.85 | 198.85 | 0.0 | 99.77 Neigh | 0.16345 | 0.16345 | 0.16345 | 0.0 | 0.08 Comm | 0.042516 | 0.042516 | 0.042516 | 0.0 | 0.02 Output | 3.57e-05 | 3.57e-05 | 3.57e-05 | 0.0 | 0.00 Modify | 0.22738 | 0.22738 | 0.22738 | 0.0 | 0.11 Other | | 0.01785 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6366.00 ave 6366 max 6366 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539082.0 ave 539082 max 539082 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539082 Ave neighs/atom = 134.77050 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.086415214554, Press = -0.615558070496494 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -5882.302 -5882.302 -6044.0559 -6044.0559 312.92386 312.92386 95043.261 95043.261 110.58949 110.58949 19000 -5877.6379 -5877.6379 -6043.5796 -6043.5796 321.02545 321.02545 95188.386 95188.386 -193.01067 -193.01067 Loop time of 194.457 on 1 procs for 1000 steps with 4000 atoms Performance: 0.444 ns/day, 54.016 hours/ns, 5.143 timesteps/s 70.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 193.92 | 193.92 | 193.92 | 0.0 | 99.72 Neigh | 0.22744 | 0.22744 | 0.22744 | 0.0 | 0.12 Comm | 0.1128 | 0.1128 | 0.1128 | 0.0 | 0.06 Output | 3.65e-05 | 3.65e-05 | 3.65e-05 | 0.0 | 0.00 Modify | 0.18135 | 0.18135 | 0.18135 | 0.0 | 0.09 Other | | 0.018 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6321.00 ave 6321 max 6321 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539426.0 ave 539426 max 539426 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539426 Ave neighs/atom = 134.85650 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.133824610604, Press = -0.325699166300433 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -5877.6379 -5877.6379 -6043.5796 -6043.5796 321.02545 321.02545 95188.386 95188.386 -193.01067 -193.01067 20000 -5882.6123 -5882.6123 -6043.7937 -6043.7937 311.81618 311.81618 95131.047 95131.047 -166.41452 -166.41452 Loop time of 197.568 on 1 procs for 1000 steps with 4000 atoms Performance: 0.437 ns/day, 54.880 hours/ns, 5.062 timesteps/s 69.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 197.05 | 197.05 | 197.05 | 0.0 | 99.74 Neigh | 0.23129 | 0.23129 | 0.23129 | 0.0 | 0.12 Comm | 0.064021 | 0.064021 | 0.064021 | 0.0 | 0.03 Output | 3.52e-05 | 3.52e-05 | 3.52e-05 | 0.0 | 0.00 Modify | 0.20104 | 0.20104 | 0.20104 | 0.0 | 0.10 Other | | 0.01775 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6281.00 ave 6281 max 6281 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539052.0 ave 539052 max 539052 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539052 Ave neighs/atom = 134.76300 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.1650692493, Press = -1.64680371503984 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -5882.6123 -5882.6123 -6043.7937 -6043.7937 311.81618 311.81618 95131.047 95131.047 -166.41452 -166.41452 21000 -5877.4441 -5877.4441 -6039.9138 -6039.9138 314.30872 314.30872 95062.491 95062.491 214.84507 214.84507 Loop time of 197.853 on 1 procs for 1000 steps with 4000 atoms Performance: 0.437 ns/day, 54.959 hours/ns, 5.054 timesteps/s 69.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 197.25 | 197.25 | 197.25 | 0.0 | 99.70 Neigh | 0.29443 | 0.29443 | 0.29443 | 0.0 | 0.15 Comm | 0.062864 | 0.062864 | 0.062864 | 0.0 | 0.03 Output | 4.51e-05 | 4.51e-05 | 4.51e-05 | 0.0 | 0.00 Modify | 0.22804 | 0.22804 | 0.22804 | 0.0 | 0.12 Other | | 0.01801 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6292.00 ave 6292 max 6292 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539264.0 ave 539264 max 539264 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539264 Ave neighs/atom = 134.81600 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.104591409737, Press = -0.885717957835222 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -5877.4441 -5877.4441 -6039.9138 -6039.9138 314.30872 314.30872 95062.491 95062.491 214.84507 214.84507 22000 -5880.985 -5880.985 -6042.7722 -6042.7722 312.98827 312.98827 95178.134 95178.134 -208.16072 -208.16072 Loop time of 193.997 on 1 procs for 1000 steps with 4000 atoms Performance: 0.445 ns/day, 53.888 hours/ns, 5.155 timesteps/s 70.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 193.47 | 193.47 | 193.47 | 0.0 | 99.73 Neigh | 0.20163 | 0.20163 | 0.20163 | 0.0 | 0.10 Comm | 0.043221 | 0.043221 | 0.043221 | 0.0 | 0.02 Output | 2.94e-05 | 2.94e-05 | 2.94e-05 | 0.0 | 0.00 Modify | 0.26075 | 0.26075 | 0.26075 | 0.0 | 0.13 Other | | 0.01833 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6364.00 ave 6364 max 6364 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539634.0 ave 539634 max 539634 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539634 Ave neighs/atom = 134.90850 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.118343766214, Press = 0.251086784395598 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -5880.985 -5880.985 -6042.7722 -6042.7722 312.98827 312.98827 95178.134 95178.134 -208.16072 -208.16072 23000 -5878.7645 -5878.7645 -6045.2823 -6045.2823 322.14003 322.14003 95162.082 95162.082 -214.25825 -214.25825 Loop time of 195.988 on 1 procs for 1000 steps with 4000 atoms Performance: 0.441 ns/day, 54.441 hours/ns, 5.102 timesteps/s 69.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 195.49 | 195.49 | 195.49 | 0.0 | 99.75 Neigh | 0.15061 | 0.15061 | 0.15061 | 0.0 | 0.08 Comm | 0.063304 | 0.063304 | 0.063304 | 0.0 | 0.03 Output | 3.24e-05 | 3.24e-05 | 3.24e-05 | 0.0 | 0.00 Modify | 0.26364 | 0.26364 | 0.26364 | 0.0 | 0.13 Other | | 0.0182 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6351.00 ave 6351 max 6351 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539108.0 ave 539108 max 539108 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539108 Ave neighs/atom = 134.77700 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.16238235563, Press = -1.83148561859228 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.377 | 5.377 | 5.377 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -5878.7645 -5878.7645 -6045.2823 -6045.2823 322.14003 322.14003 95162.082 95162.082 -214.25825 -214.25825 24000 -5882.7977 -5882.7977 -6044.5068 -6044.5068 312.83723 312.83723 94895.054 94895.054 490.59621 490.59621 Loop time of 199.719 on 1 procs for 1000 steps with 4000 atoms Performance: 0.433 ns/day, 55.478 hours/ns, 5.007 timesteps/s 68.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 199.16 | 199.16 | 199.16 | 0.0 | 99.72 Neigh | 0.20186 | 0.20186 | 0.20186 | 0.0 | 0.10 Comm | 0.067471 | 0.067471 | 0.067471 | 0.0 | 0.03 Output | 3.61e-05 | 3.61e-05 | 3.61e-05 | 0.0 | 0.00 Modify | 0.27399 | 0.27399 | 0.27399 | 0.0 | 0.14 Other | | 0.01828 | | | 0.01 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6316.00 ave 6316 max 6316 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 539576.0 ave 539576 max 539576 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 539576 Ave neighs/atom = 134.89400 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 95097.4415155598 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0