# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.840916037559509*${_u_distance} variable latticeconst_converted equal 4.840916037559509*1 lattice fcc ${latticeconst_converted} lattice fcc 4.84091603755951 Lattice spacing in x,y,z = 4.84092 4.84092 4.84092 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (48.4092 48.4092 48.4092) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000470877 secs variable mass_converted equal 40.078*${_u_mass} variable mass_converted equal 40.078*1 # specify which KIM Model to use pair_style kim LJ_ElliottAkerson_2015_Universal__MO_959249795837_003 pair_coeff * * Ca mass 1 ${mass_converted} mass 1 40.078 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 113444.292373223 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 113444.292373223/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 113444.292373223/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 113444.292373223/(1*1*${_u_distance}) variable V0_metal equal 113444.292373223/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 113444.292373223*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 113444.292373223 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 20.5307 ghost atom cutoff = 20.5307 binsize = 10.2653, bins = 5 5 5 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 20.5307 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -4266.6318 -4266.6318 -4418.1643 -4418.1643 293.15 293.15 113444.29 113444.29 1426.7359 1426.7359 1000 -4093.8644 -4093.8644 -4247.1434 -4247.1434 296.52851 296.52851 116513.14 116513.14 1052.3597 1052.3597 Loop time of 62.2112 on 1 procs for 1000 steps with 4000 atoms Performance: 1.389 ns/day, 17.281 hours/ns, 16.074 timesteps/s 43.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 61.083 | 61.083 | 61.083 | 0.0 | 98.19 Neigh | 0.36366 | 0.36366 | 0.36366 | 0.0 | 0.58 Comm | 0.33984 | 0.33984 | 0.33984 | 0.0 | 0.55 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.37666 | 0.37666 | 0.37666 | 0.0 | 0.61 Other | | 0.04847 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.99246e+06 ave 4.99246e+06 max 4.99246e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4992460 Ave neighs/atom = 1248.12 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -4093.8644 -4093.8644 -4247.1434 -4247.1434 296.52851 296.52851 116513.14 116513.14 1052.3597 1052.3597 2000 -4114.3131 -4114.3131 -4263.9131 -4263.9131 289.41134 289.41134 116411.83 116411.83 205.88469 205.88469 Loop time of 58.4265 on 1 procs for 1000 steps with 4000 atoms Performance: 1.479 ns/day, 16.230 hours/ns, 17.116 timesteps/s 45.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 57.632 | 57.632 | 57.632 | 0.0 | 98.64 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.28725 | 0.28725 | 0.28725 | 0.0 | 0.49 Output | 4.4107e-05 | 4.4107e-05 | 4.4107e-05 | 0.0 | 0.00 Modify | 0.45894 | 0.45894 | 0.45894 | 0.0 | 0.79 Other | | 0.0485 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.97283e+06 ave 4.97283e+06 max 4.97283e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4972828 Ave neighs/atom = 1243.21 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -4114.3131 -4114.3131 -4263.9131 -4263.9131 289.41134 289.41134 116411.83 116411.83 205.88469 205.88469 3000 -4101.3653 -4101.3653 -4253.4732 -4253.4732 294.26294 294.26294 116658.82 116658.82 -0.83886995 -0.83886995 Loop time of 56.4126 on 1 procs for 1000 steps with 4000 atoms Performance: 1.532 ns/day, 15.670 hours/ns, 17.727 timesteps/s 47.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 55.692 | 55.692 | 55.692 | 0.0 | 98.72 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.34675 | 0.34675 | 0.34675 | 0.0 | 0.61 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.32558 | 0.32558 | 0.32558 | 0.0 | 0.58 Other | | 0.04805 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.97767e+06 ave 4.97767e+06 max 4.97767e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4977670 Ave neighs/atom = 1244.42 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -4101.3653 -4101.3653 -4253.4732 -4253.4732 294.26294 294.26294 116658.82 116658.82 -0.83886995 -0.83886995 4000 -4113.0245 -4113.0245 -4261.8283 -4261.8283 287.87098 287.87098 116553.35 116553.35 -209.91666 -209.91666 Loop time of 54.0478 on 1 procs for 1000 steps with 4000 atoms Performance: 1.599 ns/day, 15.013 hours/ns, 18.502 timesteps/s 49.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 53.471 | 53.471 | 53.471 | 0.0 | 98.93 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.33014 | 0.33014 | 0.33014 | 0.0 | 0.61 Output | 4.3869e-05 | 4.3869e-05 | 4.3869e-05 | 0.0 | 0.00 Modify | 0.20815 | 0.20815 | 0.20815 | 0.0 | 0.39 Other | | 0.03828 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.96782e+06 ave 4.96782e+06 max 4.96782e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4967818 Ave neighs/atom = 1241.95 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -4113.0245 -4113.0245 -4261.8283 -4261.8283 287.87098 287.87098 116553.35 116553.35 -209.91666 -209.91666 5000 -4101.6787 -4101.6787 -4256.6874 -4256.6874 299.87468 299.87468 116623.16 116623.16 -69.792523 -69.792523 Loop time of 55.0577 on 1 procs for 1000 steps with 4000 atoms Performance: 1.569 ns/day, 15.294 hours/ns, 18.163 timesteps/s 48.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 54.387 | 54.387 | 54.387 | 0.0 | 98.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20518 | 0.20518 | 0.20518 | 0.0 | 0.37 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.43755 | 0.43755 | 0.43755 | 0.0 | 0.79 Other | | 0.02811 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.97223e+06 ave 4.97223e+06 max 4.97223e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4972230 Ave neighs/atom = 1243.06 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 298.892056741733, Press = -26.28598929153 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -4101.6787 -4101.6787 -4256.6874 -4256.6874 299.87468 299.87468 116623.16 116623.16 -69.792523 -69.792523 6000 -4110.8604 -4110.8604 -4259.9286 -4259.9286 288.38267 288.38267 116482.71 116482.71 205.52716 205.52716 Loop time of 55.6617 on 1 procs for 1000 steps with 4000 atoms Performance: 1.552 ns/day, 15.462 hours/ns, 17.966 timesteps/s 48.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 55.027 | 55.027 | 55.027 | 0.0 | 98.86 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26468 | 0.26468 | 0.26468 | 0.0 | 0.48 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.30171 | 0.30171 | 0.30171 | 0.0 | 0.54 Other | | 0.06845 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.96973e+06 ave 4.96973e+06 max 4.96973e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4969730 Ave neighs/atom = 1242.43 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.225763652313, Press = -5.69407495823245 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -4110.8604 -4110.8604 -4259.9286 -4259.9286 288.38267 288.38267 116482.71 116482.71 205.52716 205.52716 7000 -4103.8524 -4103.8524 -4256.1638 -4256.1638 294.65665 294.65665 116609.17 116609.17 -4.8964684 -4.8964684 Loop time of 54.1949 on 1 procs for 1000 steps with 4000 atoms Performance: 1.594 ns/day, 15.054 hours/ns, 18.452 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 53.637 | 53.637 | 53.637 | 0.0 | 98.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24645 | 0.24645 | 0.24645 | 0.0 | 0.45 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.26287 | 0.26287 | 0.26287 | 0.0 | 0.49 Other | | 0.04897 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.97517e+06 ave 4.97517e+06 max 4.97517e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4975174 Ave neighs/atom = 1243.79 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.351111665227, Press = -14.9990523419556 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -4103.8524 -4103.8524 -4256.1638 -4256.1638 294.65665 294.65665 116609.17 116609.17 -4.8964684 -4.8964684 8000 -4107.4598 -4107.4598 -4259.2919 -4259.2919 293.72958 293.72958 116722.37 116722.37 -705.59571 -705.59571 Loop time of 53.9405 on 1 procs for 1000 steps with 4000 atoms Performance: 1.602 ns/day, 14.983 hours/ns, 18.539 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 53.266 | 53.266 | 53.266 | 0.0 | 98.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24523 | 0.24523 | 0.24523 | 0.0 | 0.45 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.34144 | 0.34144 | 0.34144 | 0.0 | 0.63 Other | | 0.08816 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.96997e+06 ave 4.96997e+06 max 4.96997e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4969972 Ave neighs/atom = 1242.49 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.162668092371, Press = -5.36530991344388 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -4107.4598 -4107.4598 -4259.2919 -4259.2919 293.72958 293.72958 116722.37 116722.37 -705.59571 -705.59571 9000 -4101.776 -4101.776 -4255.8369 -4255.8369 298.04122 298.04122 116682.11 116682.11 -244.75168 -244.75168 Loop time of 53.7313 on 1 procs for 1000 steps with 4000 atoms Performance: 1.608 ns/day, 14.925 hours/ns, 18.611 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 53.037 | 53.037 | 53.037 | 0.0 | 98.71 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.28542 | 0.28542 | 0.28542 | 0.0 | 0.53 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.32055 | 0.32055 | 0.32055 | 0.0 | 0.60 Other | | 0.08824 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.96666e+06 ave 4.96666e+06 max 4.96666e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4966662 Ave neighs/atom = 1241.67 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.798884709465, Press = -4.0390157679498 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -4101.776 -4101.776 -4255.8369 -4255.8369 298.04122 298.04122 116682.11 116682.11 -244.75168 -244.75168 10000 -4108.3992 -4108.3992 -4257.907 -4257.907 289.23307 289.23307 116589.12 116589.12 -77.019035 -77.019035 Loop time of 53.9161 on 1 procs for 1000 steps with 4000 atoms Performance: 1.602 ns/day, 14.977 hours/ns, 18.547 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 53.225 | 53.225 | 53.225 | 0.0 | 98.72 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.32562 | 0.32562 | 0.32562 | 0.0 | 0.60 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.31689 | 0.31689 | 0.31689 | 0.0 | 0.59 Other | | 0.0487 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.96776e+06 ave 4.96776e+06 max 4.96776e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4967762 Ave neighs/atom = 1241.94 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.653653757013, Press = -0.802776735470798 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -4108.3992 -4108.3992 -4257.907 -4257.907 289.23307 289.23307 116589.12 116589.12 -77.019035 -77.019035 11000 -4101.2236 -4101.2236 -4253.941 -4253.941 295.44222 295.44222 116688.21 116688.21 -154.78757 -154.78757 Loop time of 54.0706 on 1 procs for 1000 steps with 4000 atoms Performance: 1.598 ns/day, 15.020 hours/ns, 18.494 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 53.479 | 53.479 | 53.479 | 0.0 | 98.91 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26101 | 0.26101 | 0.26101 | 0.0 | 0.48 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.28213 | 0.28213 | 0.28213 | 0.0 | 0.52 Other | | 0.0482 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.97145e+06 ave 4.97145e+06 max 4.97145e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4971448 Ave neighs/atom = 1242.86 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.836757251423, Press = 0.0494592960650981 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -4101.2236 -4101.2236 -4253.941 -4253.941 295.44222 295.44222 116688.21 116688.21 -154.78757 -154.78757 12000 -4108.9982 -4108.9982 -4260.092 -4260.092 292.30127 292.30127 116603.76 116603.76 -275.73561 -275.73561 Loop time of 53.6486 on 1 procs for 1000 steps with 4000 atoms Performance: 1.610 ns/day, 14.902 hours/ns, 18.640 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 53.11 | 53.11 | 53.11 | 0.0 | 99.00 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20054 | 0.20054 | 0.20054 | 0.0 | 0.37 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.30983 | 0.30983 | 0.30983 | 0.0 | 0.58 Other | | 0.02824 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.96727e+06 ave 4.96727e+06 max 4.96727e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4967268 Ave neighs/atom = 1241.82 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.881669554719, Press = 1.1469765127458 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -4108.9982 -4108.9982 -4260.092 -4260.092 292.30127 292.30127 116603.76 116603.76 -275.73561 -275.73561 13000 -4105.2019 -4105.2019 -4255.6007 -4255.6007 290.9567 290.9567 116733.3 116733.3 -477.50883 -477.50883 Loop time of 53.6315 on 1 procs for 1000 steps with 4000 atoms Performance: 1.611 ns/day, 14.898 hours/ns, 18.646 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 52.999 | 52.999 | 52.999 | 0.0 | 98.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.18512 | 0.18512 | 0.18512 | 0.0 | 0.35 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.39924 | 0.39924 | 0.39924 | 0.0 | 0.74 Other | | 0.0484 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.97108e+06 ave 4.97108e+06 max 4.97108e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4971084 Ave neighs/atom = 1242.77 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.888965157065, Press = -0.0509220980460108 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -4105.2019 -4105.2019 -4255.6007 -4255.6007 290.9567 290.9567 116733.3 116733.3 -477.50883 -477.50883 14000 -4105.6836 -4105.6836 -4255.1816 -4255.1816 289.21411 289.21411 116714.8 116714.8 -380.35804 -380.35804 Loop time of 53.7479 on 1 procs for 1000 steps with 4000 atoms Performance: 1.608 ns/day, 14.930 hours/ns, 18.605 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 53.046 | 53.046 | 53.046 | 0.0 | 98.69 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.27898 | 0.27898 | 0.27898 | 0.0 | 0.52 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.33478 | 0.33478 | 0.33478 | 0.0 | 0.62 Other | | 0.08838 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.9657e+06 ave 4.9657e+06 max 4.9657e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4965696 Ave neighs/atom = 1241.42 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.726971802225, Press = 2.37072433527111 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -4105.6836 -4105.6836 -4255.1816 -4255.1816 289.21411 289.21411 116714.8 116714.8 -380.35804 -380.35804 15000 -4105.2886 -4105.2886 -4256.5767 -4256.5767 292.67696 292.67696 116608.61 116608.61 -46.718927 -46.718927 Loop time of 59.1934 on 1 procs for 1000 steps with 4000 atoms Performance: 1.460 ns/day, 16.443 hours/ns, 16.894 timesteps/s 45.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.585 | 58.585 | 58.585 | 0.0 | 98.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2484 | 0.2484 | 0.2484 | 0.0 | 0.42 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.29162 | 0.29162 | 0.29162 | 0.0 | 0.49 Other | | 0.0683 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.96647e+06 ave 4.96647e+06 max 4.96647e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4966474 Ave neighs/atom = 1241.62 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.802883239205, Press = 1.83042359201279 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -4105.2886 -4105.2886 -4256.5767 -4256.5767 292.67696 292.67696 116608.61 116608.61 -46.718927 -46.718927 16000 -4110.2763 -4110.2763 -4261.2012 -4261.2012 291.97437 291.97437 116508.47 116508.47 40.974635 40.974635 Loop time of 62.7002 on 1 procs for 1000 steps with 4000 atoms Performance: 1.378 ns/day, 17.417 hours/ns, 15.949 timesteps/s 43.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 61.827 | 61.827 | 61.827 | 0.0 | 98.61 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.40438 | 0.40438 | 0.40438 | 0.0 | 0.64 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.42088 | 0.42088 | 0.42088 | 0.0 | 0.67 Other | | 0.04798 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.97032e+06 ave 4.97032e+06 max 4.97032e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4970318 Ave neighs/atom = 1242.58 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.694714312973, Press = 1.9470386222391 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -4110.2763 -4110.2763 -4261.2012 -4261.2012 291.97437 291.97437 116508.47 116508.47 40.974635 40.974635 17000 -4106.5222 -4106.5222 -4256.265 -4256.265 289.68759 289.68759 116534.98 116534.98 265.04044 265.04044 Loop time of 59.5121 on 1 procs for 1000 steps with 4000 atoms Performance: 1.452 ns/day, 16.531 hours/ns, 16.803 timesteps/s 45.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.747 | 58.747 | 58.747 | 0.0 | 98.71 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26547 | 0.26547 | 0.26547 | 0.0 | 0.45 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.42313 | 0.42313 | 0.42313 | 0.0 | 0.71 Other | | 0.07694 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.97399e+06 ave 4.97399e+06 max 4.97399e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4973988 Ave neighs/atom = 1243.5 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.666232849188, Press = 0.372979089767001 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -4106.5222 -4106.5222 -4256.265 -4256.265 289.68759 289.68759 116534.98 116534.98 265.04044 265.04044 18000 -4111.191 -4111.191 -4260.6481 -4260.6481 289.13498 289.13498 116480.26 116480.26 170.29013 170.29013 Loop time of 60.814 on 1 procs for 1000 steps with 4000 atoms Performance: 1.421 ns/day, 16.893 hours/ns, 16.444 timesteps/s 44.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.072 | 60.072 | 60.072 | 0.0 | 98.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24528 | 0.24528 | 0.24528 | 0.0 | 0.40 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.42938 | 0.42938 | 0.42938 | 0.0 | 0.71 Other | | 0.06725 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.97281e+06 ave 4.97281e+06 max 4.97281e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4972808 Ave neighs/atom = 1243.2 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.483364680693, Press = 0.565303329831101 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -4111.191 -4111.191 -4260.6481 -4260.6481 289.13498 289.13498 116480.26 116480.26 170.29013 170.29013 19000 -4104.0901 -4104.0901 -4255.1546 -4255.1546 292.24452 292.24452 116402.45 116402.45 896.04484 896.04484 Loop time of 62.6306 on 1 procs for 1000 steps with 4000 atoms Performance: 1.380 ns/day, 17.397 hours/ns, 15.967 timesteps/s 42.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 61.948 | 61.948 | 61.948 | 0.0 | 98.91 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.31448 | 0.31448 | 0.31448 | 0.0 | 0.50 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.27997 | 0.27997 | 0.27997 | 0.0 | 0.45 Other | | 0.08783 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.97481e+06 ave 4.97481e+06 max 4.97481e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4974812 Ave neighs/atom = 1243.7 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.429556173888, Press = 0.263993985865196 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -4104.0901 -4104.0901 -4255.1546 -4255.1546 292.24452 292.24452 116402.45 116402.45 896.04484 896.04484 20000 -4105.441 -4105.441 -4261.623 -4261.623 302.14462 302.14462 116366.55 116366.55 613.85433 613.85433 Loop time of 61.9194 on 1 procs for 1000 steps with 4000 atoms Performance: 1.395 ns/day, 17.200 hours/ns, 16.150 timesteps/s 43.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 61.19 | 61.19 | 61.19 | 0.0 | 98.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.28605 | 0.28605 | 0.28605 | 0.0 | 0.46 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.36047 | 0.36047 | 0.36047 | 0.0 | 0.58 Other | | 0.08252 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.97773e+06 ave 4.97773e+06 max 4.97773e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4977732 Ave neighs/atom = 1244.43 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.338405062459, Press = -0.282097775326612 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -4105.441 -4105.441 -4261.623 -4261.623 302.14462 302.14462 116366.55 116366.55 613.85433 613.85433 21000 -4107.6314 -4107.6314 -4258.6488 -4258.6488 292.15337 292.15337 116378.96 116378.96 729.99158 729.99158 Loop time of 61.8086 on 1 procs for 1000 steps with 4000 atoms Performance: 1.398 ns/day, 17.169 hours/ns, 16.179 timesteps/s 43.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 61.177 | 61.177 | 61.177 | 0.0 | 98.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.29407 | 0.29407 | 0.29407 | 0.0 | 0.48 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.24958 | 0.24958 | 0.24958 | 0.0 | 0.40 Other | | 0.08776 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.97971e+06 ave 4.97971e+06 max 4.97971e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4979708 Ave neighs/atom = 1244.93 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.283526216232, Press = -0.883266055266981 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -4107.6314 -4107.6314 -4258.6488 -4258.6488 292.15337 292.15337 116378.96 116378.96 729.99158 729.99158 22000 -4102.6194 -4102.6194 -4255.3822 -4255.3822 295.53 295.53 116597.67 116597.67 93.05886 93.05886 Loop time of 61.8287 on 1 procs for 1000 steps with 4000 atoms Performance: 1.397 ns/day, 17.175 hours/ns, 16.174 timesteps/s 43.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 61.095 | 61.095 | 61.095 | 0.0 | 98.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.28556 | 0.28556 | 0.28556 | 0.0 | 0.46 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.35997 | 0.35997 | 0.35997 | 0.0 | 0.58 Other | | 0.08826 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.97774e+06 ave 4.97774e+06 max 4.97774e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4977736 Ave neighs/atom = 1244.43 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.259381915516, Press = -0.618140484704103 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 25.73 | 25.73 | 25.73 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -4102.6194 -4102.6194 -4255.3822 -4255.3822 295.53 295.53 116597.67 116597.67 93.05886 93.05886 23000 -4107.6071 -4107.6071 -4261.3387 -4261.3387 297.40417 297.40417 116580.61 116580.61 -268.81762 -268.81762 Loop time of 62.8885 on 1 procs for 1000 steps with 4000 atoms Performance: 1.374 ns/day, 17.469 hours/ns, 15.901 timesteps/s 42.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 62.156 | 62.156 | 62.156 | 0.0 | 98.84 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14426 | 0.14426 | 0.14426 | 0.0 | 0.23 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.52054 | 0.52054 | 0.52054 | 0.0 | 0.83 Other | | 0.0678 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 21327 ave 21327 max 21327 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 4.97011e+06 ave 4.97011e+06 max 4.97011e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4970112 Ave neighs/atom = 1242.53 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 116573.224334686 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0