# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.2905998453497896*${_u_distance} variable latticeconst_converted equal 4.2905998453497896*1 lattice bcc ${latticeconst_converted} lattice bcc 4.29059984534979 Lattice spacing in x,y,z = 4.2906 4.2906 4.2906 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (42.906 42.906 42.906) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms create_atoms CPU = 0.00030303 secs variable mass_converted equal 22.98977*${_u_mass} variable mass_converted equal 22.98977*1 # specify which KIM Model to use pair_style kim EAM_Dynamo_NicholAckland_2016_Na__MO_048172193005_000 pair_coeff * * Na mass 1 ${mass_converted} mass 1 22.98977 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 78986.7124724339 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 78986.7124724339/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 78986.7124724339/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 78986.7124724339/(1*1*${_u_distance}) variable V0_metal equal 78986.7124724339/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 78986.7124724339*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 78986.7124724339 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.57778 ghost atom cutoff = 7.57778 binsize = 3.78889, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.57778 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -2142.2527 -2142.2527 -2218.0001 -2218.0001 293.15 293.15 78986.712 78986.712 1024.3124 1024.3124 1000 -2077.6257 -2077.6257 -2152.0066 -2152.0066 287.86149 287.86149 83614.187 83614.187 -231.76438 -231.76438 Loop time of 5.59061 on 1 procs for 1000 steps with 2000 atoms Performance: 15.454 ns/day, 1.553 hours/ns, 178.871 timesteps/s 36.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.2325 | 5.2325 | 5.2325 | 0.0 | 93.59 Neigh | 0.047108 | 0.047108 | 0.047108 | 0.0 | 0.84 Comm | 0.039385 | 0.039385 | 0.039385 | 0.0 | 0.70 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.22204 | 0.22204 | 0.22204 | 0.0 | 3.97 Other | | 0.04955 | | | 0.89 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97334 ave 97334 max 97334 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97334 Ave neighs/atom = 48.667 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -2077.6257 -2077.6257 -2152.0066 -2152.0066 287.86149 287.86149 83614.187 83614.187 -231.76438 -231.76438 2000 -2075.2228 -2075.2228 -2151.879 -2151.879 296.66737 296.66737 83538.239 83538.239 -135.15525 -135.15525 Loop time of 5.44986 on 1 procs for 1000 steps with 2000 atoms Performance: 15.854 ns/day, 1.514 hours/ns, 183.491 timesteps/s 39.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 4.8642 | 4.8642 | 4.8642 | 0.0 | 89.25 Neigh | 0.16894 | 0.16894 | 0.16894 | 0.0 | 3.10 Comm | 0.059548 | 0.059548 | 0.059548 | 0.0 | 1.09 Output | 3.9101e-05 | 3.9101e-05 | 3.9101e-05 | 0.0 | 0.00 Modify | 0.29734 | 0.29734 | 0.29734 | 0.0 | 5.46 Other | | 0.05978 | | | 1.10 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97902 ave 97902 max 97902 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97902 Ave neighs/atom = 48.951 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -2075.2228 -2075.2228 -2151.879 -2151.879 296.66737 296.66737 83538.239 83538.239 -135.15525 -135.15525 3000 -2072.8661 -2072.8661 -2150.022 -2150.022 298.601 298.601 83421.465 83421.465 2.9115518 2.9115518 Loop time of 6.11211 on 1 procs for 1000 steps with 2000 atoms Performance: 14.136 ns/day, 1.698 hours/ns, 163.610 timesteps/s 34.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.5897 | 5.5897 | 5.5897 | 0.0 | 91.45 Neigh | 0.18973 | 0.18973 | 0.18973 | 0.0 | 3.10 Comm | 0.059735 | 0.059735 | 0.059735 | 0.0 | 0.98 Output | 3.8147e-05 | 3.8147e-05 | 3.8147e-05 | 0.0 | 0.00 Modify | 0.24299 | 0.24299 | 0.24299 | 0.0 | 3.98 Other | | 0.0299 | | | 0.49 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 98108 ave 98108 max 98108 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 98108 Ave neighs/atom = 49.054 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -2072.8661 -2072.8661 -2150.022 -2150.022 298.601 298.601 83421.465 83421.465 2.9115518 2.9115518 4000 -2079.1515 -2079.1515 -2152.9122 -2152.9122 285.46134 285.46134 83322.644 83322.644 -66.67673 -66.67673 Loop time of 6.33737 on 1 procs for 1000 steps with 2000 atoms Performance: 13.633 ns/day, 1.760 hours/ns, 157.794 timesteps/s 33.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.8936 | 5.8936 | 5.8936 | 0.0 | 93.00 Neigh | 0.1283 | 0.1283 | 0.1283 | 0.0 | 2.02 Comm | 0.10242 | 0.10242 | 0.10242 | 0.0 | 1.62 Output | 3.2187e-05 | 3.2187e-05 | 3.2187e-05 | 0.0 | 0.00 Modify | 0.16332 | 0.16332 | 0.16332 | 0.0 | 2.58 Other | | 0.0497 | | | 0.78 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 98450 ave 98450 max 98450 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 98450 Ave neighs/atom = 49.225 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -2079.1515 -2079.1515 -2152.9122 -2152.9122 285.46134 285.46134 83322.644 83322.644 -66.67673 -66.67673 5000 -2073.3058 -2073.3058 -2150.0927 -2150.0927 297.17346 297.17346 83279.781 83279.781 237.31067 237.31067 Loop time of 6.50648 on 1 procs for 1000 steps with 2000 atoms Performance: 13.279 ns/day, 1.807 hours/ns, 153.693 timesteps/s 33.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.9662 | 5.9662 | 5.9662 | 0.0 | 91.70 Neigh | 0.14694 | 0.14694 | 0.14694 | 0.0 | 2.26 Comm | 0.08006 | 0.08006 | 0.08006 | 0.0 | 1.23 Output | 2.3127e-05 | 2.3127e-05 | 2.3127e-05 | 0.0 | 0.00 Modify | 0.28347 | 0.28347 | 0.28347 | 0.0 | 4.36 Other | | 0.02976 | | | 0.46 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2937 ave 2937 max 2937 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 98224 ave 98224 max 98224 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 98224 Ave neighs/atom = 49.112 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 294.798708229021, Press = -70.4592220222103 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -2073.3058 -2073.3058 -2150.0927 -2150.0927 297.17346 297.17346 83279.781 83279.781 237.31067 237.31067 6000 -2075.178 -2075.178 -2152.6408 -2152.6408 299.78912 299.78912 83674.778 83674.778 -263.94083 -263.94083 Loop time of 6.4516 on 1 procs for 1000 steps with 2000 atoms Performance: 13.392 ns/day, 1.792 hours/ns, 155.000 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.9075 | 5.9075 | 5.9075 | 0.0 | 91.57 Neigh | 0.084303 | 0.084303 | 0.084303 | 0.0 | 1.31 Comm | 0.079967 | 0.079967 | 0.079967 | 0.0 | 1.24 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.32961 | 0.32961 | 0.32961 | 0.0 | 5.11 Other | | 0.05018 | | | 0.78 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 98050 ave 98050 max 98050 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 98050 Ave neighs/atom = 49.025 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.359253677436, Press = 21.6075273624174 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -2075.178 -2075.178 -2152.6408 -2152.6408 299.78912 299.78912 83674.778 83674.778 -263.94083 -263.94083 7000 -2074.5749 -2074.5749 -2151.0865 -2151.0865 296.10754 296.10754 83136.423 83136.423 307.73312 307.73312 Loop time of 6.24802 on 1 procs for 1000 steps with 2000 atoms Performance: 13.828 ns/day, 1.736 hours/ns, 160.051 timesteps/s 34.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.8863 | 5.8863 | 5.8863 | 0.0 | 94.21 Neigh | 0.10523 | 0.10523 | 0.10523 | 0.0 | 1.68 Comm | 0.019625 | 0.019625 | 0.019625 | 0.0 | 0.31 Output | 2.1935e-05 | 2.1935e-05 | 2.1935e-05 | 0.0 | 0.00 Modify | 0.22693 | 0.22693 | 0.22693 | 0.0 | 3.63 Other | | 0.009911 | | | 0.16 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 98330 ave 98330 max 98330 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 98330 Ave neighs/atom = 49.165 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 294.194837413329, Press = -1.28113618000105 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -2074.5749 -2074.5749 -2151.0865 -2151.0865 296.10754 296.10754 83136.423 83136.423 307.73312 307.73312 8000 -2075.3708 -2075.3708 -2152.8336 -2152.8336 299.78911 299.78911 83579.586 83579.586 -135.55288 -135.55288 Loop time of 6.48581 on 1 procs for 1000 steps with 2000 atoms Performance: 13.321 ns/day, 1.802 hours/ns, 154.183 timesteps/s 33.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.9121 | 5.9121 | 5.9121 | 0.0 | 91.15 Neigh | 0.12653 | 0.12653 | 0.12653 | 0.0 | 1.95 Comm | 0.13131 | 0.13131 | 0.13131 | 0.0 | 2.02 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.28594 | 0.28594 | 0.28594 | 0.0 | 4.41 Other | | 0.02994 | | | 0.46 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97598 ave 97598 max 97598 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97598 Ave neighs/atom = 48.799 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.473469247049, Press = 0.84029456797367 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -2075.3708 -2075.3708 -2152.8336 -2152.8336 299.78911 299.78911 83579.586 83579.586 -135.55288 -135.55288 9000 -2072.1135 -2072.1135 -2150.7146 -2150.7146 304.19445 304.19445 83264.217 83264.217 128.01503 128.01503 Loop time of 6.47688 on 1 procs for 1000 steps with 2000 atoms Performance: 13.340 ns/day, 1.799 hours/ns, 154.395 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.85 | 5.85 | 5.85 | 0.0 | 90.32 Neigh | 0.20858 | 0.20858 | 0.20858 | 0.0 | 3.22 Comm | 0.12014 | 0.12014 | 0.12014 | 0.0 | 1.85 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.24815 | 0.24815 | 0.24815 | 0.0 | 3.83 Other | | 0.05 | | | 0.77 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 98278 ave 98278 max 98278 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 98278 Ave neighs/atom = 49.139 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.085348142524, Press = 2.52256210338812 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -2072.1135 -2072.1135 -2150.7146 -2150.7146 304.19445 304.19445 83264.217 83264.217 128.01503 128.01503 10000 -2076.4946 -2076.4946 -2153.3944 -2153.3944 297.60996 297.60996 83694.541 83694.541 -331.94165 -331.94165 Loop time of 6.3988 on 1 procs for 1000 steps with 2000 atoms Performance: 13.503 ns/day, 1.777 hours/ns, 156.279 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.7738 | 5.7738 | 5.7738 | 0.0 | 90.23 Neigh | 0.16794 | 0.16794 | 0.16794 | 0.0 | 2.62 Comm | 0.039715 | 0.039715 | 0.039715 | 0.0 | 0.62 Output | 6.0081e-05 | 6.0081e-05 | 6.0081e-05 | 0.0 | 0.00 Modify | 0.40748 | 0.40748 | 0.40748 | 0.0 | 6.37 Other | | 0.009843 | | | 0.15 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97422 ave 97422 max 97422 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97422 Ave neighs/atom = 48.711 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.25206799733, Press = -0.732619517132142 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -2076.4946 -2076.4946 -2153.3944 -2153.3944 297.60996 297.60996 83694.541 83694.541 -331.94165 -331.94165 11000 -2075.8827 -2075.8827 -2151.0817 -2151.0817 291.02811 291.02811 83328.827 83328.827 57.817894 57.817894 Loop time of 6.23462 on 1 procs for 1000 steps with 2000 atoms Performance: 13.858 ns/day, 1.732 hours/ns, 160.395 timesteps/s 34.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.6894 | 5.6894 | 5.6894 | 0.0 | 91.26 Neigh | 0.14625 | 0.14625 | 0.14625 | 0.0 | 2.35 Comm | 0.039821 | 0.039821 | 0.039821 | 0.0 | 0.64 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.32924 | 0.32924 | 0.32924 | 0.0 | 5.28 Other | | 0.02987 | | | 0.48 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 98070 ave 98070 max 98070 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 98070 Ave neighs/atom = 49.035 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.44156565653, Press = 3.16779544771749 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -2075.8827 -2075.8827 -2151.0817 -2151.0817 291.02811 291.02811 83328.827 83328.827 57.817894 57.817894 12000 -2075.3097 -2075.3097 -2150.1392 -2150.1392 289.59771 289.59771 83200.434 83200.434 231.94777 231.94777 Loop time of 6.00471 on 1 procs for 1000 steps with 2000 atoms Performance: 14.389 ns/day, 1.668 hours/ns, 166.536 timesteps/s 35.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.6031 | 5.6031 | 5.6031 | 0.0 | 93.31 Neigh | 0.12642 | 0.12642 | 0.12642 | 0.0 | 2.11 Comm | 0.019457 | 0.019457 | 0.019457 | 0.0 | 0.32 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.18615 | 0.18615 | 0.18615 | 0.0 | 3.10 Other | | 0.06959 | | | 1.16 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 98150 ave 98150 max 98150 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 98150 Ave neighs/atom = 49.075 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.700580399572, Press = -0.847544127497542 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -2075.3097 -2075.3097 -2150.1392 -2150.1392 289.59771 289.59771 83200.434 83200.434 231.94777 231.94777 13000 -2075.614 -2075.614 -2150.7991 -2150.7991 290.97399 290.97399 83662.861 83662.861 -267.30283 -267.30283 Loop time of 6.38385 on 1 procs for 1000 steps with 2000 atoms Performance: 13.534 ns/day, 1.773 hours/ns, 156.645 timesteps/s 33.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.6782 | 5.6782 | 5.6782 | 0.0 | 88.95 Neigh | 0.23048 | 0.23048 | 0.23048 | 0.0 | 3.61 Comm | 0.059438 | 0.059438 | 0.059438 | 0.0 | 0.93 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.38601 | 0.38601 | 0.38601 | 0.0 | 6.05 Other | | 0.02968 | | | 0.46 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97774 ave 97774 max 97774 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97774 Ave neighs/atom = 48.887 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.590088170875, Press = 1.33473349084569 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -2075.614 -2075.614 -2150.7991 -2150.7991 290.97399 290.97399 83662.861 83662.861 -267.30283 -267.30283 14000 -2078.1364 -2078.1364 -2150.8982 -2150.8982 281.59583 281.59583 83070.907 83070.907 252.42238 252.42238 Loop time of 5.88236 on 1 procs for 1000 steps with 2000 atoms Performance: 14.688 ns/day, 1.634 hours/ns, 170.000 timesteps/s 35.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.4521 | 5.4521 | 5.4521 | 0.0 | 92.69 Neigh | 0.11559 | 0.11559 | 0.11559 | 0.0 | 1.97 Comm | 0.059307 | 0.059307 | 0.059307 | 0.0 | 1.01 Output | 2.718e-05 | 2.718e-05 | 2.718e-05 | 0.0 | 0.00 Modify | 0.24592 | 0.24592 | 0.24592 | 0.0 | 4.18 Other | | 0.009436 | | | 0.16 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 98524 ave 98524 max 98524 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 98524 Ave neighs/atom = 49.262 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.456504809745, Press = -1.30115160069357 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -2078.1364 -2078.1364 -2150.8982 -2150.8982 281.59583 281.59583 83070.907 83070.907 252.42238 252.42238 15000 -2075.1401 -2075.1401 -2152.2866 -2152.2866 298.56505 298.56505 83407.121 83407.121 -107.34877 -107.34877 Loop time of 5.53586 on 1 procs for 1000 steps with 2000 atoms Performance: 15.607 ns/day, 1.538 hours/ns, 180.640 timesteps/s 38.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.1204 | 5.1204 | 5.1204 | 0.0 | 92.50 Neigh | 0.097579 | 0.097579 | 0.097579 | 0.0 | 1.76 Comm | 0.039583 | 0.039583 | 0.039583 | 0.0 | 0.72 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.23834 | 0.23834 | 0.23834 | 0.0 | 4.31 Other | | 0.03988 | | | 0.72 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 98308 ave 98308 max 98308 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 98308 Ave neighs/atom = 49.154 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.563723195496, Press = 1.06538819992179 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -2075.1401 -2075.1401 -2152.2866 -2152.2866 298.56505 298.56505 83407.121 83407.121 -107.34877 -107.34877 16000 -2077.225 -2077.225 -2152.7105 -2152.7105 292.13684 292.13684 83193.132 83193.132 170.40667 170.40667 Loop time of 5.32763 on 1 procs for 1000 steps with 2000 atoms Performance: 16.217 ns/day, 1.480 hours/ns, 187.701 timesteps/s 39.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 4.9553 | 4.9553 | 4.9553 | 0.0 | 93.01 Neigh | 0.12022 | 0.12022 | 0.12022 | 0.0 | 2.26 Comm | 0.039453 | 0.039453 | 0.039453 | 0.0 | 0.74 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.20269 | 0.20269 | 0.20269 | 0.0 | 3.80 Other | | 0.00998 | | | 0.19 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 98576 ave 98576 max 98576 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 98576 Ave neighs/atom = 49.288 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.598962156211, Press = 1.18661396461232 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -2077.225 -2077.225 -2152.7105 -2152.7105 292.13684 292.13684 83193.132 83193.132 170.40667 170.40667 17000 -2073.2594 -2073.2594 -2148.9555 -2148.9555 292.95204 292.95204 83735.76 83735.76 -174.77192 -174.77192 Loop time of 4.98359 on 1 procs for 1000 steps with 2000 atoms Performance: 17.337 ns/day, 1.384 hours/ns, 200.659 timesteps/s 41.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 4.6923 | 4.6923 | 4.6923 | 0.0 | 94.16 Neigh | 0.077974 | 0.077974 | 0.077974 | 0.0 | 1.56 Comm | 0.047052 | 0.047052 | 0.047052 | 0.0 | 0.94 Output | 2.1935e-05 | 2.1935e-05 | 2.1935e-05 | 0.0 | 0.00 Modify | 0.1363 | 0.1363 | 0.1363 | 0.0 | 2.74 Other | | 0.0299 | | | 0.60 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97688 ave 97688 max 97688 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97688 Ave neighs/atom = 48.844 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.555231211629, Press = 1.12295784860297 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -2073.2594 -2073.2594 -2148.9555 -2148.9555 292.95204 292.95204 83735.76 83735.76 -174.77192 -174.77192 18000 -2074.4086 -2074.4086 -2150.5682 -2150.5682 294.74544 294.74544 82866.077 82866.077 572.98664 572.98664 Loop time of 5.3405 on 1 procs for 1000 steps with 2000 atoms Performance: 16.178 ns/day, 1.483 hours/ns, 187.248 timesteps/s 39.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 4.8774 | 4.8774 | 4.8774 | 0.0 | 91.33 Neigh | 0.10747 | 0.10747 | 0.10747 | 0.0 | 2.01 Comm | 0.039657 | 0.039657 | 0.039657 | 0.0 | 0.74 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.30624 | 0.30624 | 0.30624 | 0.0 | 5.73 Other | | 0.009667 | | | 0.18 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 98434 ave 98434 max 98434 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 98434 Ave neighs/atom = 49.217 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.464028490253, Press = -0.666136903976985 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -2074.4086 -2074.4086 -2150.5682 -2150.5682 294.74544 294.74544 82866.077 82866.077 572.98664 572.98664 19000 -2073.6171 -2073.6171 -2150.249 -2150.249 296.57369 296.57369 83609.36 83609.36 -207.55768 -207.55768 Loop time of 6.00018 on 1 procs for 1000 steps with 2000 atoms Performance: 14.400 ns/day, 1.667 hours/ns, 166.662 timesteps/s 35.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.4742 | 5.4742 | 5.4742 | 0.0 | 91.23 Neigh | 0.12816 | 0.12816 | 0.12816 | 0.0 | 2.14 Comm | 0.059623 | 0.059623 | 0.059623 | 0.0 | 0.99 Output | 3.0041e-05 | 3.0041e-05 | 3.0041e-05 | 0.0 | 0.00 Modify | 0.2882 | 0.2882 | 0.2882 | 0.0 | 4.80 Other | | 0.04993 | | | 0.83 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97886 ave 97886 max 97886 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97886 Ave neighs/atom = 48.943 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.364016863007, Press = 1.02946433475926 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -2073.6171 -2073.6171 -2150.249 -2150.249 296.57369 296.57369 83609.36 83609.36 -207.55768 -207.55768 20000 -2076.7124 -2076.7124 -2151.0532 -2151.0532 287.70662 287.70662 83213.869 83213.869 210.69221 210.69221 Loop time of 5.86035 on 1 procs for 1000 steps with 2000 atoms Performance: 14.743 ns/day, 1.628 hours/ns, 170.638 timesteps/s 36.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.5257 | 5.5257 | 5.5257 | 0.0 | 94.29 Neigh | 0.064755 | 0.064755 | 0.064755 | 0.0 | 1.10 Comm | 0.039371 | 0.039371 | 0.039371 | 0.0 | 0.67 Output | 2.2173e-05 | 2.2173e-05 | 2.2173e-05 | 0.0 | 0.00 Modify | 0.18053 | 0.18053 | 0.18053 | 0.0 | 3.08 Other | | 0.04998 | | | 0.85 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 98372 ave 98372 max 98372 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 98372 Ave neighs/atom = 49.186 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.352241950435, Press = 0.733522986287633 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -2076.7124 -2076.7124 -2151.0532 -2151.0532 287.70662 287.70662 83213.869 83213.869 210.69221 210.69221 21000 -2073.5833 -2073.5833 -2150.7274 -2150.7274 298.55583 298.55583 83565.911 83565.911 -132.86824 -132.86824 Loop time of 5.0471 on 1 procs for 1000 steps with 2000 atoms Performance: 17.119 ns/day, 1.402 hours/ns, 198.133 timesteps/s 42.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 4.7285 | 4.7285 | 4.7285 | 0.0 | 93.69 Neigh | 0.080622 | 0.080622 | 0.080622 | 0.0 | 1.60 Comm | 0.039446 | 0.039446 | 0.039446 | 0.0 | 0.78 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.18877 | 0.18877 | 0.18877 | 0.0 | 3.74 Other | | 0.009697 | | | 0.19 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97444 ave 97444 max 97444 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97444 Ave neighs/atom = 48.722 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 83390.8073369184 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0