# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.2905998453497896*${_u_distance} variable latticeconst_converted equal 4.2905998453497896*1 lattice bcc ${latticeconst_converted} lattice bcc 4.29059984534979 Lattice spacing in x,y,z = 4.2906 4.2906 4.2906 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (42.906 42.906 42.906) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms create_atoms CPU = 0.000301123 secs variable mass_converted equal 22.98977*${_u_mass} variable mass_converted equal 22.98977*1 # specify which KIM Model to use pair_style kim EAM_Dynamo_NicholAckland_2016_Na__MO_048172193005_000 pair_coeff * * Na mass 1 ${mass_converted} mass 1 22.98977 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 78986.7124724339 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 78986.7124724339/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 78986.7124724339/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 78986.7124724339/(1*1*${_u_distance}) variable V0_metal equal 78986.7124724339/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 78986.7124724339*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 78986.7124724339 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.57778 ghost atom cutoff = 7.57778 binsize = 3.78889, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.57778 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -2137.0849 -2137.0849 -2218.0001 -2218.0001 313.15 313.15 78986.712 78986.712 1094.1955 1094.1955 1000 -2066.2963 -2066.2963 -2145.9206 -2145.9206 308.15421 308.15421 83688.046 83688.046 -171.3577 -171.3577 Loop time of 5.01061 on 1 procs for 1000 steps with 2000 atoms Performance: 17.243 ns/day, 1.392 hours/ns, 199.577 timesteps/s 41.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 4.6408 | 4.6408 | 4.6408 | 0.0 | 92.62 Neigh | 0.087798 | 0.087798 | 0.087798 | 0.0 | 1.75 Comm | 0.039404 | 0.039404 | 0.039404 | 0.0 | 0.79 Output | 3.7909e-05 | 3.7909e-05 | 3.7909e-05 | 0.0 | 0.00 Modify | 0.22289 | 0.22289 | 0.22289 | 0.0 | 4.45 Other | | 0.01966 | | | 0.39 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 96774 ave 96774 max 96774 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 96774 Ave neighs/atom = 48.387 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -2066.2963 -2066.2963 -2145.9206 -2145.9206 308.15421 308.15421 83688.046 83688.046 -171.3577 -171.3577 2000 -2065.5636 -2065.5636 -2143.3871 -2143.3871 301.18495 301.18495 83601.904 83601.904 -89.339735 -89.339735 Loop time of 5.27292 on 1 procs for 1000 steps with 2000 atoms Performance: 16.386 ns/day, 1.465 hours/ns, 189.648 timesteps/s 40.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 4.819 | 4.819 | 4.819 | 0.0 | 91.39 Neigh | 0.12765 | 0.12765 | 0.12765 | 0.0 | 2.42 Comm | 0.12961 | 0.12961 | 0.12961 | 0.0 | 2.46 Output | 4.0054e-05 | 4.0054e-05 | 4.0054e-05 | 0.0 | 0.00 Modify | 0.16665 | 0.16665 | 0.16665 | 0.0 | 3.16 Other | | 0.02996 | | | 0.57 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97558 ave 97558 max 97558 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97558 Ave neighs/atom = 48.779 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -2065.5636 -2065.5636 -2143.3871 -2143.3871 301.18495 301.18495 83601.904 83601.904 -89.339735 -89.339735 3000 -2063.6805 -2063.6805 -2145.7539 -2145.7539 317.63235 317.63235 83646.384 83646.384 -103.27368 -103.27368 Loop time of 6.1284 on 1 procs for 1000 steps with 2000 atoms Performance: 14.098 ns/day, 1.702 hours/ns, 163.175 timesteps/s 33.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.6478 | 5.6478 | 5.6478 | 0.0 | 92.16 Neigh | 0.10731 | 0.10731 | 0.10731 | 0.0 | 1.75 Comm | 0.019101 | 0.019101 | 0.019101 | 0.0 | 0.31 Output | 3.0994e-05 | 3.0994e-05 | 3.0994e-05 | 0.0 | 0.00 Modify | 0.30449 | 0.30449 | 0.30449 | 0.0 | 4.97 Other | | 0.04964 | | | 0.81 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97332 ave 97332 max 97332 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97332 Ave neighs/atom = 48.666 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -2063.6805 -2063.6805 -2145.7539 -2145.7539 317.63235 317.63235 83646.384 83646.384 -103.27368 -103.27368 4000 -2064.6588 -2064.6588 -2146.4289 -2146.4289 316.45872 316.45872 83280.975 83280.975 200.85998 200.85998 Loop time of 5.58294 on 1 procs for 1000 steps with 2000 atoms Performance: 15.476 ns/day, 1.551 hours/ns, 179.117 timesteps/s 38.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.1847 | 5.1847 | 5.1847 | 0.0 | 92.87 Neigh | 0.18563 | 0.18563 | 0.18563 | 0.0 | 3.32 Comm | 0.039539 | 0.039539 | 0.039539 | 0.0 | 0.71 Output | 5.2929e-05 | 5.2929e-05 | 5.2929e-05 | 0.0 | 0.00 Modify | 0.16312 | 0.16312 | 0.16312 | 0.0 | 2.92 Other | | 0.009902 | | | 0.18 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97952 ave 97952 max 97952 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97952 Ave neighs/atom = 48.976 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -2064.6588 -2064.6588 -2146.4289 -2146.4289 316.45872 316.45872 83280.975 83280.975 200.85998 200.85998 5000 -2063.1167 -2063.1167 -2145.758 -2145.758 319.83041 319.83041 83636.437 83636.437 -42.032351 -42.032351 Loop time of 5.93875 on 1 procs for 1000 steps with 2000 atoms Performance: 14.549 ns/day, 1.650 hours/ns, 168.386 timesteps/s 35.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.3545 | 5.3545 | 5.3545 | 0.0 | 90.16 Neigh | 0.23104 | 0.23104 | 0.23104 | 0.0 | 3.89 Comm | 0.059761 | 0.059761 | 0.059761 | 0.0 | 1.01 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.26352 | 0.26352 | 0.26352 | 0.0 | 4.44 Other | | 0.02995 | | | 0.50 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97248 ave 97248 max 97248 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97248 Ave neighs/atom = 48.624 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 315.987792339074, Press = 72.6292383669668 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -2063.1167 -2063.1167 -2145.758 -2145.758 319.83041 319.83041 83636.437 83636.437 -42.032351 -42.032351 6000 -2066.4824 -2066.4824 -2147.2222 -2147.2222 312.47139 312.47139 83607.798 83607.798 -41.191692 -41.191692 Loop time of 5.75789 on 1 procs for 1000 steps with 2000 atoms Performance: 15.005 ns/day, 1.599 hours/ns, 173.675 timesteps/s 37.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.2847 | 5.2847 | 5.2847 | 0.0 | 91.78 Neigh | 0.16627 | 0.16627 | 0.16627 | 0.0 | 2.89 Comm | 0.059448 | 0.059448 | 0.059448 | 0.0 | 1.03 Output | 2.2888e-05 | 2.2888e-05 | 2.2888e-05 | 0.0 | 0.00 Modify | 0.2376 | 0.2376 | 0.2376 | 0.0 | 4.13 Other | | 0.00987 | | | 0.17 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 96934 ave 96934 max 96934 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 96934 Ave neighs/atom = 48.467 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.564324065265, Press = -26.3356072909354 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -2066.4824 -2066.4824 -2147.2222 -2147.2222 312.47139 312.47139 83607.798 83607.798 -41.191692 -41.191692 7000 -2062.9347 -2062.9347 -2145.2594 -2145.2594 318.60517 318.60517 83297.275 83297.275 295.52734 295.52734 Loop time of 6.46602 on 1 procs for 1000 steps with 2000 atoms Performance: 13.362 ns/day, 1.796 hours/ns, 154.655 timesteps/s 33.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 6.1168 | 6.1168 | 6.1168 | 0.0 | 94.60 Neigh | 0.11195 | 0.11195 | 0.11195 | 0.0 | 1.73 Comm | 0.01969 | 0.01969 | 0.01969 | 0.0 | 0.30 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.2074 | 0.2074 | 0.2074 | 0.0 | 3.21 Other | | 0.01016 | | | 0.16 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2939 ave 2939 max 2939 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97918 ave 97918 max 97918 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97918 Ave neighs/atom = 48.959 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.229258885957, Press = -1.75498655097305 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -2062.9347 -2062.9347 -2145.2594 -2145.2594 318.60517 318.60517 83297.275 83297.275 295.52734 295.52734 8000 -2065.1084 -2065.1084 -2147.2149 -2147.2149 317.76072 317.76072 83872.293 83872.293 -348.3538 -348.3538 Loop time of 6.28451 on 1 procs for 1000 steps with 2000 atoms Performance: 13.748 ns/day, 1.746 hours/ns, 159.121 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.7323 | 5.7323 | 5.7323 | 0.0 | 91.21 Neigh | 0.1641 | 0.1641 | 0.1641 | 0.0 | 2.61 Comm | 0.079442 | 0.079442 | 0.079442 | 0.0 | 1.26 Output | 2.1935e-05 | 2.1935e-05 | 2.1935e-05 | 0.0 | 0.00 Modify | 0.25869 | 0.25869 | 0.25869 | 0.0 | 4.12 Other | | 0.04995 | | | 0.79 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97222 ave 97222 max 97222 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97222 Ave neighs/atom = 48.611 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.066430990186, Press = -3.96212202395754 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -2065.1084 -2065.1084 -2147.2149 -2147.2149 317.76072 317.76072 83872.293 83872.293 -348.3538 -348.3538 9000 -2062.1865 -2062.1865 -2145.292 -2145.292 321.62686 321.62686 83264.223 83264.223 351.3108 351.3108 Loop time of 6.36457 on 1 procs for 1000 steps with 2000 atoms Performance: 13.575 ns/day, 1.768 hours/ns, 157.120 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.7562 | 5.7562 | 5.7562 | 0.0 | 90.44 Neigh | 0.15154 | 0.15154 | 0.15154 | 0.0 | 2.38 Comm | 0.13958 | 0.13958 | 0.13958 | 0.0 | 2.19 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.28735 | 0.28735 | 0.28735 | 0.0 | 4.51 Other | | 0.02988 | | | 0.47 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97540 ave 97540 max 97540 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97540 Ave neighs/atom = 48.77 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.454986235268, Press = -2.51753602386451 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -2062.1865 -2062.1865 -2145.292 -2145.292 321.62686 321.62686 83264.223 83264.223 351.3108 351.3108 10000 -2065.9459 -2065.9459 -2147.7409 -2147.7409 316.55517 316.55517 83760.252 83760.252 -202.73841 -202.73841 Loop time of 6.46191 on 1 procs for 1000 steps with 2000 atoms Performance: 13.371 ns/day, 1.795 hours/ns, 154.753 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.9377 | 5.9377 | 5.9377 | 0.0 | 91.89 Neigh | 0.13306 | 0.13306 | 0.13306 | 0.0 | 2.06 Comm | 0.059613 | 0.059613 | 0.059613 | 0.0 | 0.92 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.30167 | 0.30167 | 0.30167 | 0.0 | 4.67 Other | | 0.02986 | | | 0.46 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97272 ave 97272 max 97272 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97272 Ave neighs/atom = 48.636 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.347569355179, Press = 0.965473928429723 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -2065.9459 -2065.9459 -2147.7409 -2147.7409 316.55517 316.55517 83760.252 83760.252 -202.73841 -202.73841 11000 -2067.3905 -2067.3905 -2145.2159 -2145.2159 301.19214 301.19214 83398.28 83398.28 63.044896 63.044896 Loop time of 6.44014 on 1 procs for 1000 steps with 2000 atoms Performance: 13.416 ns/day, 1.789 hours/ns, 155.276 timesteps/s 33.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.997 | 5.997 | 5.997 | 0.0 | 93.12 Neigh | 0.10681 | 0.10681 | 0.10681 | 0.0 | 1.66 Comm | 0.019599 | 0.019599 | 0.019599 | 0.0 | 0.30 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.28667 | 0.28667 | 0.28667 | 0.0 | 4.45 Other | | 0.02999 | | | 0.47 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97434 ave 97434 max 97434 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97434 Ave neighs/atom = 48.717 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.049433187434, Press = -2.05387050344247 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -2067.3905 -2067.3905 -2145.2159 -2145.2159 301.19214 301.19214 83398.28 83398.28 63.044896 63.044896 12000 -2069.3156 -2069.3156 -2147.2253 -2147.2253 301.51859 301.51859 83433.467 83433.467 36.942953 36.942953 Loop time of 6.38914 on 1 procs for 1000 steps with 2000 atoms Performance: 13.523 ns/day, 1.775 hours/ns, 156.516 timesteps/s 33.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.8868 | 5.8868 | 5.8868 | 0.0 | 92.14 Neigh | 0.14742 | 0.14742 | 0.14742 | 0.0 | 2.31 Comm | 0.01935 | 0.01935 | 0.01935 | 0.0 | 0.30 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.32571 | 0.32571 | 0.32571 | 0.0 | 5.10 Other | | 0.00985 | | | 0.15 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 98118 ave 98118 max 98118 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 98118 Ave neighs/atom = 49.059 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.94100794832, Press = 0.683494645729278 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -2069.3156 -2069.3156 -2147.2253 -2147.2253 301.51859 301.51859 83433.467 83433.467 36.942953 36.942953 13000 -2066.5551 -2066.5551 -2146.2292 -2146.2292 308.34716 308.34716 83620.121 83620.121 -139.11217 -139.11217 Loop time of 5.77071 on 1 procs for 1000 steps with 2000 atoms Performance: 14.972 ns/day, 1.603 hours/ns, 173.289 timesteps/s 36.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.3492 | 5.3492 | 5.3492 | 0.0 | 92.70 Neigh | 0.14713 | 0.14713 | 0.14713 | 0.0 | 2.55 Comm | 0.059198 | 0.059198 | 0.059198 | 0.0 | 1.03 Output | 3.0041e-05 | 3.0041e-05 | 3.0041e-05 | 0.0 | 0.00 Modify | 0.20541 | 0.20541 | 0.20541 | 0.0 | 3.56 Other | | 0.009723 | | | 0.17 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97136 ave 97136 max 97136 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97136 Ave neighs/atom = 48.568 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.921801924097, Press = -3.30146639052737 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -2066.5551 -2066.5551 -2146.2292 -2146.2292 308.34716 308.34716 83620.121 83620.121 -139.11217 -139.11217 14000 -2063.9757 -2063.9757 -2146.1761 -2146.1761 318.12379 318.12379 83301.068 83301.068 199.66248 199.66248 Loop time of 6.13073 on 1 procs for 1000 steps with 2000 atoms Performance: 14.093 ns/day, 1.703 hours/ns, 163.113 timesteps/s 34.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.6732 | 5.6732 | 5.6732 | 0.0 | 92.54 Neigh | 0.14033 | 0.14033 | 0.14033 | 0.0 | 2.29 Comm | 0.019805 | 0.019805 | 0.019805 | 0.0 | 0.32 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.28747 | 0.28747 | 0.28747 | 0.0 | 4.69 Other | | 0.009943 | | | 0.16 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97790 ave 97790 max 97790 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97790 Ave neighs/atom = 48.895 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.977800633942, Press = -0.520422025252413 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -2063.9757 -2063.9757 -2146.1761 -2146.1761 318.12379 318.12379 83301.068 83301.068 199.66248 199.66248 15000 -2062.3683 -2062.3683 -2143.4235 -2143.4235 313.6919 313.6919 83839.519 83839.519 -240.06555 -240.06555 Loop time of 5.98 on 1 procs for 1000 steps with 2000 atoms Performance: 14.448 ns/day, 1.661 hours/ns, 167.224 timesteps/s 34.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.5374 | 5.5374 | 5.5374 | 0.0 | 92.60 Neigh | 0.14692 | 0.14692 | 0.14692 | 0.0 | 2.46 Comm | 0.079217 | 0.079217 | 0.079217 | 0.0 | 1.32 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.20688 | 0.20688 | 0.20688 | 0.0 | 3.46 Other | | 0.009529 | | | 0.16 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2939 ave 2939 max 2939 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97184 ave 97184 max 97184 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97184 Ave neighs/atom = 48.592 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.121755300125, Press = -0.92243607065199 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -2062.3683 -2062.3683 -2143.4235 -2143.4235 313.6919 313.6919 83839.519 83839.519 -240.06555 -240.06555 16000 -2069.7795 -2069.7795 -2148.1998 -2148.1998 303.49476 303.49476 83355.545 83355.545 28.237094 28.237094 Loop time of 5.65516 on 1 procs for 1000 steps with 2000 atoms Performance: 15.278 ns/day, 1.571 hours/ns, 176.830 timesteps/s 37.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.2719 | 5.2719 | 5.2719 | 0.0 | 93.22 Neigh | 0.10665 | 0.10665 | 0.10665 | 0.0 | 1.89 Comm | 0.059422 | 0.059422 | 0.059422 | 0.0 | 1.05 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.20728 | 0.20728 | 0.20728 | 0.0 | 3.67 Other | | 0.009912 | | | 0.18 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97788 ave 97788 max 97788 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97788 Ave neighs/atom = 48.894 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.018374428101, Press = -0.429230793852847 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -2069.7795 -2069.7795 -2148.1998 -2148.1998 303.49476 303.49476 83355.545 83355.545 28.237094 28.237094 17000 -2064.0197 -2064.0197 -2144.3697 -2144.3697 310.96255 310.96255 83385.448 83385.448 128.12227 128.12227 Loop time of 6.35173 on 1 procs for 1000 steps with 2000 atoms Performance: 13.603 ns/day, 1.764 hours/ns, 157.437 timesteps/s 33.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.8818 | 5.8818 | 5.8818 | 0.0 | 92.60 Neigh | 0.16231 | 0.16231 | 0.16231 | 0.0 | 2.56 Comm | 0.059622 | 0.059622 | 0.059622 | 0.0 | 0.94 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.19798 | 0.19798 | 0.19798 | 0.0 | 3.12 Other | | 0.05001 | | | 0.79 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97504 ave 97504 max 97504 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97504 Ave neighs/atom = 48.752 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.936299411262, Press = -0.392899607539958 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -2064.0197 -2064.0197 -2144.3697 -2144.3697 310.96255 310.96255 83385.448 83385.448 128.12227 128.12227 18000 -2067.3183 -2067.3183 -2148.2521 -2148.2521 313.22212 313.22212 83745.343 83745.343 -241.05924 -241.05924 Loop time of 6.05275 on 1 procs for 1000 steps with 2000 atoms Performance: 14.275 ns/day, 1.681 hours/ns, 165.214 timesteps/s 34.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.491 | 5.491 | 5.491 | 0.0 | 90.72 Neigh | 0.20605 | 0.20605 | 0.20605 | 0.0 | 3.40 Comm | 0.079413 | 0.079413 | 0.079413 | 0.0 | 1.31 Output | 2.1935e-05 | 2.1935e-05 | 2.1935e-05 | 0.0 | 0.00 Modify | 0.26657 | 0.26657 | 0.26657 | 0.0 | 4.40 Other | | 0.009726 | | | 0.16 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97480 ave 97480 max 97480 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97480 Ave neighs/atom = 48.74 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.890338659287, Press = -0.7127352692984 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -2067.3183 -2067.3183 -2148.2521 -2148.2521 313.22212 313.22212 83745.343 83745.343 -241.05924 -241.05924 19000 -2062.4977 -2062.4977 -2144.5086 -2144.5086 317.39083 317.39083 83354.763 83354.763 206.74886 206.74886 Loop time of 5.37707 on 1 procs for 1000 steps with 2000 atoms Performance: 16.068 ns/day, 1.494 hours/ns, 185.975 timesteps/s 39.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 4.9585 | 4.9585 | 4.9585 | 0.0 | 92.22 Neigh | 0.087016 | 0.087016 | 0.087016 | 0.0 | 1.62 Comm | 0.069793 | 0.069793 | 0.069793 | 0.0 | 1.30 Output | 3.0994e-05 | 3.0994e-05 | 3.0994e-05 | 0.0 | 0.00 Modify | 0.25197 | 0.25197 | 0.25197 | 0.0 | 4.69 Other | | 0.009785 | | | 0.18 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97554 ave 97554 max 97554 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97554 Ave neighs/atom = 48.777 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.911074963308, Press = -0.91252336733006 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -2062.4977 -2062.4977 -2144.5086 -2144.5086 317.39083 317.39083 83354.763 83354.763 206.74886 206.74886 20000 -2065.4711 -2065.4711 -2146.0403 -2146.0403 311.81103 311.81103 83636.51 83636.51 -134.09238 -134.09238 Loop time of 5.62634 on 1 procs for 1000 steps with 2000 atoms Performance: 15.356 ns/day, 1.563 hours/ns, 177.735 timesteps/s 37.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.3033 | 5.3033 | 5.3033 | 0.0 | 94.26 Neigh | 0.087458 | 0.087458 | 0.087458 | 0.0 | 1.55 Comm | 0.059117 | 0.059117 | 0.059117 | 0.0 | 1.05 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.12646 | 0.12646 | 0.12646 | 0.0 | 2.25 Other | | 0.05002 | | | 0.89 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2943 ave 2943 max 2943 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97608 ave 97608 max 97608 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97608 Ave neighs/atom = 48.804 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.974594567424, Press = 0.284172394733779 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -2065.4711 -2065.4711 -2146.0403 -2146.0403 311.81103 311.81103 83636.51 83636.51 -134.09238 -134.09238 21000 -2063.0574 -2063.0574 -2146.0688 -2146.0688 321.26276 321.26276 83479.399 83479.399 96.50136 96.50136 Loop time of 6.12005 on 1 procs for 1000 steps with 2000 atoms Performance: 14.118 ns/day, 1.700 hours/ns, 163.397 timesteps/s 34.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.675 | 5.675 | 5.675 | 0.0 | 92.73 Neigh | 0.14892 | 0.14892 | 0.14892 | 0.0 | 2.43 Comm | 0.019778 | 0.019778 | 0.019778 | 0.0 | 0.32 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.24635 | 0.24635 | 0.24635 | 0.0 | 4.03 Other | | 0.03 | | | 0.49 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97424 ave 97424 max 97424 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97424 Ave neighs/atom = 48.712 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.876661420443, Press = -1.45293345031351 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -2063.0574 -2063.0574 -2146.0688 -2146.0688 321.26276 321.26276 83479.399 83479.399 96.50136 96.50136 22000 -2069.7563 -2069.7563 -2147.0889 -2147.0889 299.28517 299.28517 83339.451 83339.451 54.381854 54.381854 Loop time of 5.17433 on 1 procs for 1000 steps with 2000 atoms Performance: 16.698 ns/day, 1.437 hours/ns, 193.262 timesteps/s 40.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 4.787 | 4.787 | 4.787 | 0.0 | 92.51 Neigh | 0.10959 | 0.10959 | 0.10959 | 0.0 | 2.12 Comm | 0.039074 | 0.039074 | 0.039074 | 0.0 | 0.76 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.20886 | 0.20886 | 0.20886 | 0.0 | 4.04 Other | | 0.02981 | | | 0.58 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97962 ave 97962 max 97962 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97962 Ave neighs/atom = 48.981 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.847176393389, Press = 1.27500717908013 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -2069.7563 -2069.7563 -2147.0889 -2147.0889 299.28517 299.28517 83339.451 83339.451 54.381854 54.381854 23000 -2063.8149 -2063.8149 -2145.7193 -2145.7193 316.97837 316.97837 83717.126 83717.126 -208.92037 -208.92037 Loop time of 4.34314 on 1 procs for 1000 steps with 2000 atoms Performance: 19.893 ns/day, 1.206 hours/ns, 230.248 timesteps/s 48.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 4.0486 | 4.0486 | 4.0486 | 0.0 | 93.22 Neigh | 0.10683 | 0.10683 | 0.10683 | 0.0 | 2.46 Comm | 0.039234 | 0.039234 | 0.039234 | 0.0 | 0.90 Output | 2.1935e-05 | 2.1935e-05 | 2.1935e-05 | 0.0 | 0.00 Modify | 0.11865 | 0.11865 | 0.11865 | 0.0 | 2.73 Other | | 0.02977 | | | 0.69 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97088 ave 97088 max 97088 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97088 Ave neighs/atom = 48.544 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.797659909031, Press = -1.10320190131747 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -2063.8149 -2063.8149 -2145.7193 -2145.7193 316.97837 316.97837 83717.126 83717.126 -208.92037 -208.92037 24000 -2063.2003 -2063.2003 -2145.2769 -2145.2769 317.645 317.645 83208.155 83208.155 377.03719 377.03719 Loop time of 5.69737 on 1 procs for 1000 steps with 2000 atoms Performance: 15.165 ns/day, 1.583 hours/ns, 175.520 timesteps/s 36.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.2814 | 5.2814 | 5.2814 | 0.0 | 92.70 Neigh | 0.13598 | 0.13598 | 0.13598 | 0.0 | 2.39 Comm | 0.039215 | 0.039215 | 0.039215 | 0.0 | 0.69 Output | 2.1935e-05 | 2.1935e-05 | 2.1935e-05 | 0.0 | 0.00 Modify | 0.23071 | 0.23071 | 0.23071 | 0.0 | 4.05 Other | | 0.01002 | | | 0.18 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97864 ave 97864 max 97864 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97864 Ave neighs/atom = 48.932 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.860298822827, Press = 0.124044036398227 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -2063.2003 -2063.2003 -2145.2769 -2145.2769 317.645 317.645 83208.155 83208.155 377.03719 377.03719 25000 -2064.4795 -2064.4795 -2146.0452 -2146.0452 315.66777 315.66777 83535.023 83535.023 -42.565674 -42.565674 Loop time of 5.74784 on 1 procs for 1000 steps with 2000 atoms Performance: 15.032 ns/day, 1.597 hours/ns, 173.978 timesteps/s 37.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.3622 | 5.3622 | 5.3622 | 0.0 | 93.29 Neigh | 0.065036 | 0.065036 | 0.065036 | 0.0 | 1.13 Comm | 0.059318 | 0.059318 | 0.059318 | 0.0 | 1.03 Output | 2.1935e-05 | 2.1935e-05 | 2.1935e-05 | 0.0 | 0.00 Modify | 0.23117 | 0.23117 | 0.23117 | 0.0 | 4.02 Other | | 0.03011 | | | 0.52 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97396 ave 97396 max 97396 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97396 Ave neighs/atom = 48.698 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.905657683093, Press = -0.892113085379317 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -2064.4795 -2064.4795 -2146.0452 -2146.0452 315.66777 315.66777 83535.023 83535.023 -42.565674 -42.565674 26000 -2064.9448 -2064.9448 -2146.9855 -2146.9855 317.5061 317.5061 83426.704 83426.704 76.310825 76.310825 Loop time of 5.15536 on 1 procs for 1000 steps with 2000 atoms Performance: 16.759 ns/day, 1.432 hours/ns, 193.973 timesteps/s 40.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 4.7923 | 4.7923 | 4.7923 | 0.0 | 92.96 Neigh | 0.10562 | 0.10562 | 0.10562 | 0.0 | 2.05 Comm | 0.039051 | 0.039051 | 0.039051 | 0.0 | 0.76 Output | 5.1975e-05 | 5.1975e-05 | 5.1975e-05 | 0.0 | 0.00 Modify | 0.20849 | 0.20849 | 0.20849 | 0.0 | 4.04 Other | | 0.009824 | | | 0.19 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97764 ave 97764 max 97764 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97764 Ave neighs/atom = 48.882 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.929452107937, Press = 0.46648614088572 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 26000 -2064.9448 -2064.9448 -2146.9855 -2146.9855 317.5061 317.5061 83426.704 83426.704 76.310825 76.310825 27000 -2065.3606 -2065.3606 -2146.214 -2146.214 312.91093 312.91093 83523.011 83523.011 -38.483114 -38.483114 Loop time of 5.37656 on 1 procs for 1000 steps with 2000 atoms Performance: 16.070 ns/day, 1.493 hours/ns, 185.992 timesteps/s 39.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 4.9922 | 4.9922 | 4.9922 | 0.0 | 92.85 Neigh | 0.14607 | 0.14607 | 0.14607 | 0.0 | 2.72 Comm | 0.018874 | 0.018874 | 0.018874 | 0.0 | 0.35 Output | 5.5075e-05 | 5.5075e-05 | 5.5075e-05 | 0.0 | 0.00 Modify | 0.20962 | 0.20962 | 0.20962 | 0.0 | 3.90 Other | | 0.009731 | | | 0.18 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97440 ave 97440 max 97440 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97440 Ave neighs/atom = 48.72 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.964803346965, Press = -0.831028279324889 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 27000 -2065.3606 -2065.3606 -2146.214 -2146.214 312.91093 312.91093 83523.011 83523.011 -38.483114 -38.483114 28000 -2064.4822 -2064.4822 -2145.5256 -2145.5256 313.64614 313.64614 83526.476 83526.476 90.76342 90.76342 Loop time of 5.10933 on 1 procs for 1000 steps with 2000 atoms Performance: 16.910 ns/day, 1.419 hours/ns, 195.720 timesteps/s 40.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 4.6146 | 4.6146 | 4.6146 | 0.0 | 90.32 Neigh | 0.086595 | 0.086595 | 0.086595 | 0.0 | 1.69 Comm | 0.059331 | 0.059331 | 0.059331 | 0.0 | 1.16 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.33898 | 0.33898 | 0.33898 | 0.0 | 6.63 Other | | 0.009765 | | | 0.19 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2941 ave 2941 max 2941 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 97462 ave 97462 max 97462 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 97462 Ave neighs/atom = 48.731 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 83537.5249334137 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0