# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.195095829665661*${_u_distance} variable latticeconst_converted equal 4.195095829665661*1 lattice bcc ${latticeconst_converted} lattice bcc 4.19509582966566 Lattice spacing in x,y,z = 4.1950958 4.1950958 4.1950958 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (41.950958 41.950958 41.950958) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms create_atoms CPU = 0.000 seconds variable mass_converted equal 22.98977*${_u_mass} variable mass_converted equal 22.98977*1 kim_interactions Na #=== BEGIN kim_interactions ================================== pair_style kim MEAM_LAMMPS_KimKoLee_2020_Na__MO_321355778754_000 pair_coeff * * Na #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 22.98977 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 73828.7742291291 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 73828.7742291291/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 73828.7742291291/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 73828.7742291291/(1*1*${_u_distance}) variable V0_metal equal 73828.7742291291/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 73828.7742291291*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 73828.7742291291 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -2145.0192 -2145.0192 -2225.9344 -2225.9344 313.15 313.15 73828.774 73828.774 1170.6385 1170.6385 1000 -2050.8334 -2050.8334 -2131.0125 -2131.0125 310.3012 310.3012 77921.564 77921.564 -272.08541 -272.08541 Loop time of 20.1886 on 1 procs for 1000 steps with 2000 atoms Performance: 4.280 ns/day, 5.608 hours/ns, 49.533 timesteps/s 88.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 20.004 | 20.004 | 20.004 | 0.0 | 99.08 Neigh | 0.04603 | 0.04603 | 0.04603 | 0.0 | 0.23 Comm | 0.042452 | 0.042452 | 0.042452 | 0.0 | 0.21 Output | 4.45e-05 | 4.45e-05 | 4.45e-05 | 0.0 | 0.00 Modify | 0.086245 | 0.086245 | 0.086245 | 0.0 | 0.43 Other | | 0.01028 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2777.00 ave 2777 max 2777 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 63326.0 ave 63326 max 63326 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 63326 Ave neighs/atom = 31.663000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -2050.8334 -2050.8334 -2131.0125 -2131.0125 310.3012 310.3012 77921.564 77921.564 -272.08541 -272.08541 2000 -2057.0877 -2057.0877 -2137.9137 -2137.9137 312.80503 312.80503 77485.571 77485.571 -89.924292 -89.924292 Loop time of 19.5611 on 1 procs for 1000 steps with 2000 atoms Performance: 4.417 ns/day, 5.434 hours/ns, 51.122 timesteps/s 93.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 19.388 | 19.388 | 19.388 | 0.0 | 99.11 Neigh | 0.045298 | 0.045298 | 0.045298 | 0.0 | 0.23 Comm | 0.020379 | 0.020379 | 0.020379 | 0.0 | 0.10 Output | 5.27e-05 | 5.27e-05 | 5.27e-05 | 0.0 | 0.00 Modify | 0.097439 | 0.097439 | 0.097439 | 0.0 | 0.50 Other | | 0.01015 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2849.00 ave 2849 max 2849 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 63018.0 ave 63018 max 63018 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 63018 Ave neighs/atom = 31.509000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -2057.0877 -2057.0877 -2137.9137 -2137.9137 312.80503 312.80503 77485.571 77485.571 -89.924292 -89.924292 3000 -2056.753 -2056.753 -2136.1822 -2136.1822 307.39914 307.39914 77364.336 77364.336 261.61148 261.61148 Loop time of 18.9799 on 1 procs for 1000 steps with 2000 atoms Performance: 4.552 ns/day, 5.272 hours/ns, 52.687 timesteps/s 95.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 18.81 | 18.81 | 18.81 | 0.0 | 99.11 Neigh | 0.044234 | 0.044234 | 0.044234 | 0.0 | 0.23 Comm | 0.020339 | 0.020339 | 0.020339 | 0.0 | 0.11 Output | 4.49e-05 | 4.49e-05 | 4.49e-05 | 0.0 | 0.00 Modify | 0.094851 | 0.094851 | 0.094851 | 0.0 | 0.50 Other | | 0.01009 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2846.00 ave 2846 max 2846 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62952.0 ave 62952 max 62952 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62952 Ave neighs/atom = 31.476000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -2056.753 -2056.753 -2136.1822 -2136.1822 307.39914 307.39914 77364.336 77364.336 261.61148 261.61148 4000 -2054.6305 -2054.6305 -2137.2734 -2137.2734 319.83634 319.83634 77703.15 77703.15 -339.37664 -339.37664 Loop time of 19.0157 on 1 procs for 1000 steps with 2000 atoms Performance: 4.544 ns/day, 5.282 hours/ns, 52.588 timesteps/s 95.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 18.832 | 18.832 | 18.832 | 0.0 | 99.03 Neigh | 0.047164 | 0.047164 | 0.047164 | 0.0 | 0.25 Comm | 0.040731 | 0.040731 | 0.040731 | 0.0 | 0.21 Output | 3.73e-05 | 3.73e-05 | 3.73e-05 | 0.0 | 0.00 Modify | 0.085734 | 0.085734 | 0.085734 | 0.0 | 0.45 Other | | 0.01007 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2852.00 ave 2852 max 2852 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62610.0 ave 62610 max 62610 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62610 Ave neighs/atom = 31.305000 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -2054.6305 -2054.6305 -2137.2734 -2137.2734 319.83634 319.83634 77703.15 77703.15 -339.37664 -339.37664 5000 -2056.8305 -2056.8305 -2138.3168 -2138.3168 315.36036 315.36036 77412.673 77412.673 46.250123 46.250123 Loop time of 18.8159 on 1 procs for 1000 steps with 2000 atoms Performance: 4.592 ns/day, 5.227 hours/ns, 53.146 timesteps/s 96.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 18.638 | 18.638 | 18.638 | 0.0 | 99.05 Neigh | 0.04188 | 0.04188 | 0.04188 | 0.0 | 0.22 Comm | 0.020237 | 0.020237 | 0.020237 | 0.0 | 0.11 Output | 3.08e-05 | 3.08e-05 | 3.08e-05 | 0.0 | 0.00 Modify | 0.10621 | 0.10621 | 0.10621 | 0.0 | 0.56 Other | | 0.009979 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2829.00 ave 2829 max 2829 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62892.0 ave 62892 max 62892 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62892 Ave neighs/atom = 31.446000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.990354356078, Press = -60.498492363124 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -2056.8305 -2056.8305 -2138.3168 -2138.3168 315.36036 315.36036 77412.673 77412.673 46.250123 46.250123 6000 -2054.3045 -2054.3045 -2136.5563 -2136.5563 318.32299 318.32299 77499.58 77499.58 -33.040831 -33.040831 Loop time of 19.1626 on 1 procs for 1000 steps with 2000 atoms Performance: 4.509 ns/day, 5.323 hours/ns, 52.185 timesteps/s 94.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 18.999 | 18.999 | 18.999 | 0.0 | 99.15 Neigh | 0.042917 | 0.042917 | 0.042917 | 0.0 | 0.22 Comm | 0.02018 | 0.02018 | 0.02018 | 0.0 | 0.11 Output | 3.54e-05 | 3.54e-05 | 3.54e-05 | 0.0 | 0.00 Modify | 0.090051 | 0.090051 | 0.090051 | 0.0 | 0.47 Other | | 0.01007 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2840.00 ave 2840 max 2840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62838.0 ave 62838 max 62838 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62838 Ave neighs/atom = 31.419000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.873542027664, Press = 0.18147447141429 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -2054.3045 -2054.3045 -2136.5563 -2136.5563 318.32299 318.32299 77499.58 77499.58 -33.040831 -33.040831 7000 -2056.3661 -2056.3661 -2137.4153 -2137.4153 313.66882 313.66882 77792.898 77792.898 -352.63239 -352.63239 Loop time of 18.5903 on 1 procs for 1000 steps with 2000 atoms Performance: 4.648 ns/day, 5.164 hours/ns, 53.791 timesteps/s 96.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 18.428 | 18.428 | 18.428 | 0.0 | 99.13 Neigh | 0.042959 | 0.042959 | 0.042959 | 0.0 | 0.23 Comm | 0.020179 | 0.020179 | 0.020179 | 0.0 | 0.11 Output | 4.14e-05 | 4.14e-05 | 4.14e-05 | 0.0 | 0.00 Modify | 0.089514 | 0.089514 | 0.089514 | 0.0 | 0.48 Other | | 0.009963 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2855.00 ave 2855 max 2855 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62678.0 ave 62678 max 62678 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62678 Ave neighs/atom = 31.339000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.540553490077, Press = -0.34208316989727 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -2056.3661 -2056.3661 -2137.4153 -2137.4153 313.66882 313.66882 77792.898 77792.898 -352.63239 -352.63239 8000 -2054.3094 -2054.3094 -2136.0925 -2136.0925 316.50931 316.50931 77376.832 77376.832 229.64674 229.64674 Loop time of 19.7632 on 1 procs for 1000 steps with 2000 atoms Performance: 4.372 ns/day, 5.490 hours/ns, 50.599 timesteps/s 90.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 19.591 | 19.591 | 19.591 | 0.0 | 99.13 Neigh | 0.044682 | 0.044682 | 0.044682 | 0.0 | 0.23 Comm | 0.022994 | 0.022994 | 0.022994 | 0.0 | 0.12 Output | 2.81e-05 | 2.81e-05 | 2.81e-05 | 0.0 | 0.00 Modify | 0.094409 | 0.094409 | 0.094409 | 0.0 | 0.48 Other | | 0.01015 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2881.00 ave 2881 max 2881 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 63154.0 ave 63154 max 63154 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 63154 Ave neighs/atom = 31.577000 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 314.149405537409, Press = -6.65790535516591 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -2054.3094 -2054.3094 -2136.0925 -2136.0925 316.50931 316.50931 77376.832 77376.832 229.64674 229.64674 9000 -2059.7968 -2059.7968 -2139.4299 -2139.4299 308.18822 308.18822 77499.006 77499.006 -133.44206 -133.44206 Loop time of 18.3042 on 1 procs for 1000 steps with 2000 atoms Performance: 4.720 ns/day, 5.085 hours/ns, 54.632 timesteps/s 98.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 18.141 | 18.141 | 18.141 | 0.0 | 99.11 Neigh | 0.04331 | 0.04331 | 0.04331 | 0.0 | 0.24 Comm | 0.020182 | 0.020182 | 0.020182 | 0.0 | 0.11 Output | 3.13e-05 | 3.13e-05 | 3.13e-05 | 0.0 | 0.00 Modify | 0.090059 | 0.090059 | 0.090059 | 0.0 | 0.49 Other | | 0.009976 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2829.00 ave 2829 max 2829 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 63476.0 ave 63476 max 63476 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 63476 Ave neighs/atom = 31.738000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.187362872156, Press = 5.83139014728937 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -2059.7968 -2059.7968 -2139.4299 -2139.4299 308.18822 308.18822 77499.006 77499.006 -133.44206 -133.44206 10000 -2059.6705 -2059.6705 -2139.5166 -2139.5166 309.01281 309.01281 77357.917 77357.917 -11.202291 -11.202291 Loop time of 18.5949 on 1 procs for 1000 steps with 2000 atoms Performance: 4.646 ns/day, 5.165 hours/ns, 53.778 timesteps/s 96.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 18.427 | 18.427 | 18.427 | 0.0 | 99.10 Neigh | 0.044079 | 0.044079 | 0.044079 | 0.0 | 0.24 Comm | 0.020208 | 0.020208 | 0.020208 | 0.0 | 0.11 Output | 2.98e-05 | 2.98e-05 | 2.98e-05 | 0.0 | 0.00 Modify | 0.093687 | 0.093687 | 0.093687 | 0.0 | 0.50 Other | | 0.01005 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2840.00 ave 2840 max 2840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 63094.0 ave 63094 max 63094 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 63094 Ave neighs/atom = 31.547000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.903731831069, Press = -6.43631757559962 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -2059.6705 -2059.6705 -2139.5166 -2139.5166 309.01281 309.01281 77357.917 77357.917 -11.202291 -11.202291 11000 -2053.6794 -2053.6794 -2135.7191 -2135.7191 317.50212 317.50212 77397.55 77397.55 233.60531 233.60531 Loop time of 18.8394 on 1 procs for 1000 steps with 2000 atoms Performance: 4.586 ns/day, 5.233 hours/ns, 53.080 timesteps/s 96.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 18.651 | 18.651 | 18.651 | 0.0 | 99.00 Neigh | 0.047806 | 0.047806 | 0.047806 | 0.0 | 0.25 Comm | 0.021066 | 0.021066 | 0.021066 | 0.0 | 0.11 Output | 3.18e-05 | 3.18e-05 | 3.18e-05 | 0.0 | 0.00 Modify | 0.10989 | 0.10989 | 0.10989 | 0.0 | 0.58 Other | | 0.009996 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2860.00 ave 2860 max 2860 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 63364.0 ave 63364 max 63364 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 63364 Ave neighs/atom = 31.682000 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.982295825025, Press = 0.970317345204832 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -2053.6794 -2053.6794 -2135.7191 -2135.7191 317.50212 317.50212 77397.55 77397.55 233.60531 233.60531 12000 -2056.9693 -2056.9693 -2136.8035 -2136.8035 308.96674 308.96674 77718.021 77718.021 -222.08165 -222.08165 Loop time of 18.7162 on 1 procs for 1000 steps with 2000 atoms Performance: 4.616 ns/day, 5.199 hours/ns, 53.430 timesteps/s 96.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 18.55 | 18.55 | 18.55 | 0.0 | 99.11 Neigh | 0.04546 | 0.04546 | 0.04546 | 0.0 | 0.24 Comm | 0.020412 | 0.020412 | 0.020412 | 0.0 | 0.11 Output | 3.57e-05 | 3.57e-05 | 3.57e-05 | 0.0 | 0.00 Modify | 0.090375 | 0.090375 | 0.090375 | 0.0 | 0.48 Other | | 0.009979 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2840.00 ave 2840 max 2840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62796.0 ave 62796 max 62796 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62796 Ave neighs/atom = 31.398000 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.858802756621, Press = -0.817067966713922 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -2056.9693 -2056.9693 -2136.8035 -2136.8035 308.96674 308.96674 77718.021 77718.021 -222.08165 -222.08165 13000 -2055.8665 -2055.8665 -2137.4282 -2137.4282 315.65198 315.65198 77315.864 77315.864 191.33956 191.33956 Loop time of 18.3671 on 1 procs for 1000 steps with 2000 atoms Performance: 4.704 ns/day, 5.102 hours/ns, 54.445 timesteps/s 98.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 18.205 | 18.205 | 18.205 | 0.0 | 99.12 Neigh | 0.041404 | 0.041404 | 0.041404 | 0.0 | 0.23 Comm | 0.020338 | 0.020338 | 0.020338 | 0.0 | 0.11 Output | 3.23e-05 | 3.23e-05 | 3.23e-05 | 0.0 | 0.00 Modify | 0.089583 | 0.089583 | 0.089583 | 0.0 | 0.49 Other | | 0.01031 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2844.00 ave 2844 max 2844 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62780.0 ave 62780 max 62780 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62780 Ave neighs/atom = 31.390000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.918484868654, Press = -1.24373039974037 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -2055.8665 -2055.8665 -2137.4282 -2137.4282 315.65198 315.65198 77315.864 77315.864 191.33956 191.33956 14000 -2057.6724 -2057.6724 -2138.5031 -2138.5031 312.82303 312.82303 77535.239 77535.239 -190.23644 -190.23644 Loop time of 18.9192 on 1 procs for 1000 steps with 2000 atoms Performance: 4.567 ns/day, 5.255 hours/ns, 52.856 timesteps/s 96.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 18.733 | 18.733 | 18.733 | 0.0 | 99.02 Neigh | 0.043391 | 0.043391 | 0.043391 | 0.0 | 0.23 Comm | 0.020589 | 0.020589 | 0.020589 | 0.0 | 0.11 Output | 3.16e-05 | 3.16e-05 | 3.16e-05 | 0.0 | 0.00 Modify | 0.11173 | 0.11173 | 0.11173 | 0.0 | 0.59 Other | | 0.01041 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2852.00 ave 2852 max 2852 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 63140.0 ave 63140 max 63140 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 63140 Ave neighs/atom = 31.570000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.705774216116, Press = 1.52329934710079 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -2057.6724 -2057.6724 -2138.5031 -2138.5031 312.82303 312.82303 77535.239 77535.239 -190.23644 -190.23644 15000 -2060.2804 -2060.2804 -2140.4851 -2140.4851 310.40048 310.40048 77562.868 77562.868 -216.19202 -216.19202 Loop time of 17.7875 on 1 procs for 1000 steps with 2000 atoms Performance: 4.857 ns/day, 4.941 hours/ns, 56.219 timesteps/s 99.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.624 | 17.624 | 17.624 | 0.0 | 99.08 Neigh | 0.0444 | 0.0444 | 0.0444 | 0.0 | 0.25 Comm | 0.019929 | 0.019929 | 0.019929 | 0.0 | 0.11 Output | 2.82e-05 | 2.82e-05 | 2.82e-05 | 0.0 | 0.00 Modify | 0.089598 | 0.089598 | 0.089598 | 0.0 | 0.50 Other | | 0.01003 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2834.00 ave 2834 max 2834 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62610.0 ave 62610 max 62610 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62610 Ave neighs/atom = 31.305000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.743035427272, Press = -2.22502464383704 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -2060.2804 -2060.2804 -2140.4851 -2140.4851 310.40048 310.40048 77562.868 77562.868 -216.19202 -216.19202 16000 -2053.947 -2053.947 -2137.0654 -2137.0654 321.67673 321.67673 77183.237 77183.237 316.41529 316.41529 Loop time of 17.651 on 1 procs for 1000 steps with 2000 atoms Performance: 4.895 ns/day, 4.903 hours/ns, 56.654 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.487 | 17.487 | 17.487 | 0.0 | 99.07 Neigh | 0.045857 | 0.045857 | 0.045857 | 0.0 | 0.26 Comm | 0.019839 | 0.019839 | 0.019839 | 0.0 | 0.11 Output | 2.4e-05 | 2.4e-05 | 2.4e-05 | 0.0 | 0.00 Modify | 0.088964 | 0.088964 | 0.088964 | 0.0 | 0.50 Other | | 0.009787 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2853.00 ave 2853 max 2853 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 63574.0 ave 63574 max 63574 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 63574 Ave neighs/atom = 31.787000 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.989794447, Press = -0.277264240747407 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -2053.947 -2053.947 -2137.0654 -2137.0654 321.67673 321.67673 77183.237 77183.237 316.41529 316.41529 17000 -2052.705 -2052.705 -2133.1498 -2133.1498 311.3298 311.3298 77798.836 77798.836 -269.205 -269.205 Loop time of 17.1699 on 1 procs for 1000 steps with 2000 atoms Performance: 5.032 ns/day, 4.769 hours/ns, 58.241 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.01 | 17.01 | 17.01 | 0.0 | 99.07 Neigh | 0.043867 | 0.043867 | 0.043867 | 0.0 | 0.26 Comm | 0.019472 | 0.019472 | 0.019472 | 0.0 | 0.11 Output | 2.47e-05 | 2.47e-05 | 2.47e-05 | 0.0 | 0.00 Modify | 0.087392 | 0.087392 | 0.087392 | 0.0 | 0.51 Other | | 0.009596 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2854.00 ave 2854 max 2854 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62402.0 ave 62402 max 62402 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62402 Ave neighs/atom = 31.201000 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.183302167611, Press = 0.230087740431366 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -2052.705 -2052.705 -2133.1498 -2133.1498 311.3298 311.3298 77798.836 77798.836 -269.205 -269.205 18000 -2058.9176 -2058.9176 -2138.9927 -2138.9927 309.89902 309.89902 77462.105 77462.105 17.068212 17.068212 Loop time of 17.0191 on 1 procs for 1000 steps with 2000 atoms Performance: 5.077 ns/day, 4.728 hours/ns, 58.758 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 16.861 | 16.861 | 16.861 | 0.0 | 99.07 Neigh | 0.041028 | 0.041028 | 0.041028 | 0.0 | 0.24 Comm | 0.019451 | 0.019451 | 0.019451 | 0.0 | 0.11 Output | 2.71e-05 | 2.71e-05 | 2.71e-05 | 0.0 | 0.00 Modify | 0.088194 | 0.088194 | 0.088194 | 0.0 | 0.52 Other | | 0.009523 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2842.00 ave 2842 max 2842 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62880.0 ave 62880 max 62880 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62880 Ave neighs/atom = 31.440000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.164823080406, Press = -0.396039183383833 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -2058.9176 -2058.9176 -2138.9927 -2138.9927 309.89902 309.89902 77462.105 77462.105 17.068212 17.068212 19000 -2059.0618 -2059.0618 -2138.7573 -2138.7573 308.4299 308.4299 77250.68 77250.68 219.10466 219.10466 Loop time of 16.2145 on 1 procs for 1000 steps with 2000 atoms Performance: 5.329 ns/day, 4.504 hours/ns, 61.673 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 16.062 | 16.062 | 16.062 | 0.0 | 99.06 Neigh | 0.039504 | 0.039504 | 0.039504 | 0.0 | 0.24 Comm | 0.01889 | 0.01889 | 0.01889 | 0.0 | 0.12 Output | 2.39e-05 | 2.39e-05 | 2.39e-05 | 0.0 | 0.00 Modify | 0.084654 | 0.084654 | 0.084654 | 0.0 | 0.52 Other | | 0.009228 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2849.00 ave 2849 max 2849 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 63108.0 ave 63108 max 63108 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 63108 Ave neighs/atom = 31.554000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.126331943736, Press = 1.47369488250595 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -2059.0618 -2059.0618 -2138.7573 -2138.7573 308.4299 308.4299 77250.68 77250.68 219.10466 219.10466 20000 -2057.4044 -2057.4044 -2137.1689 -2137.1689 308.69667 308.69667 77952.372 77952.372 -412.94306 -412.94306 Loop time of 15.5382 on 1 procs for 1000 steps with 2000 atoms Performance: 5.560 ns/day, 4.316 hours/ns, 64.357 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.39 | 15.39 | 15.39 | 0.0 | 99.04 Neigh | 0.037815 | 0.037815 | 0.037815 | 0.0 | 0.24 Comm | 0.01984 | 0.01984 | 0.01984 | 0.0 | 0.13 Output | 2.41e-05 | 2.41e-05 | 2.41e-05 | 0.0 | 0.00 Modify | 0.081814 | 0.081814 | 0.081814 | 0.0 | 0.53 Other | | 0.009013 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2853.00 ave 2853 max 2853 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62486.0 ave 62486 max 62486 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62486 Ave neighs/atom = 31.243000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.050236694657, Press = -1.25991214674569 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -2057.4044 -2057.4044 -2137.1689 -2137.1689 308.69667 308.69667 77952.372 77952.372 -412.94306 -412.94306 21000 -2057.9919 -2057.9919 -2138.2496 -2138.2496 310.60575 310.60575 77329.877 77329.877 187.86204 187.86204 Loop time of 15.138 on 1 procs for 1000 steps with 2000 atoms Performance: 5.707 ns/day, 4.205 hours/ns, 66.059 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 14.994 | 14.994 | 14.994 | 0.0 | 99.05 Neigh | 0.036868 | 0.036868 | 0.036868 | 0.0 | 0.24 Comm | 0.017937 | 0.017937 | 0.017937 | 0.0 | 0.12 Output | 5.06e-05 | 5.06e-05 | 5.06e-05 | 0.0 | 0.00 Modify | 0.080767 | 0.080767 | 0.080767 | 0.0 | 0.53 Other | | 0.008745 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2864.00 ave 2864 max 2864 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62950.0 ave 62950 max 62950 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62950 Ave neighs/atom = 31.475000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.026112391876, Press = -0.704455576258384 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -2057.9919 -2057.9919 -2138.2496 -2138.2496 310.60575 310.60575 77329.877 77329.877 187.86204 187.86204 22000 -2053.7316 -2053.7316 -2136.1794 -2136.1794 319.08159 319.08159 77501.187 77501.187 91.039304 91.039304 Loop time of 15.6352 on 1 procs for 1000 steps with 2000 atoms Performance: 5.526 ns/day, 4.343 hours/ns, 63.958 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.485 | 15.485 | 15.485 | 0.0 | 99.04 Neigh | 0.040877 | 0.040877 | 0.040877 | 0.0 | 0.26 Comm | 0.018405 | 0.018405 | 0.018405 | 0.0 | 0.12 Output | 2.44e-05 | 2.44e-05 | 2.44e-05 | 0.0 | 0.00 Modify | 0.081852 | 0.081852 | 0.081852 | 0.0 | 0.52 Other | | 0.009011 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2827.00 ave 2827 max 2827 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62972.0 ave 62972 max 62972 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62972 Ave neighs/atom = 31.486000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.955837190407, Press = 0.243855135316867 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -2053.7316 -2053.7316 -2136.1794 -2136.1794 319.08159 319.08159 77501.187 77501.187 91.039304 91.039304 23000 -2055.0213 -2055.0213 -2136.6422 -2136.6422 315.88129 315.88129 77693.89 77693.89 -85.957402 -85.957402 Loop time of 15.166 on 1 procs for 1000 steps with 2000 atoms Performance: 5.697 ns/day, 4.213 hours/ns, 65.937 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.019 | 15.019 | 15.019 | 0.0 | 99.03 Neigh | 0.039162 | 0.039162 | 0.039162 | 0.0 | 0.26 Comm | 0.018184 | 0.018184 | 0.018184 | 0.0 | 0.12 Output | 6.6e-05 | 6.6e-05 | 6.6e-05 | 0.0 | 0.00 Modify | 0.081238 | 0.081238 | 0.081238 | 0.0 | 0.54 Other | | 0.008814 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2846.00 ave 2846 max 2846 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62636.0 ave 62636 max 62636 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62636 Ave neighs/atom = 31.318000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 77502.1300119198 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0