# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.195095829665661*${_u_distance} variable latticeconst_converted equal 4.195095829665661*1 lattice bcc ${latticeconst_converted} lattice bcc 4.19509582966566 Lattice spacing in x,y,z = 4.1950958 4.1950958 4.1950958 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (41.950958 41.950958 41.950958) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms using lattice units in orthogonal box = (0 0 0) to (41.950958 41.950958 41.950958) create_atoms CPU = 0.002 seconds variable mass_converted equal 22.98977*${_u_mass} variable mass_converted equal 22.98977*1 kim_interactions Na WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Na #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_KimKoLee_2020_Na__MO_321355778754_002 pair_coeff * * Na #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 22.98977 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 73828.7742291291 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 73828.7742291291/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 73828.7742291291/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 73828.7742291291/(1*1*${_u_distance}) variable V0_metal equal 73828.7742291291/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 73828.7742291291*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 73828.7742291291 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_321355778754_002#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -2160.5227 -2160.5227 -2225.9344 -2225.9344 253.15 253.15 73828.774 73828.774 946.34215 946.34215 1000 -2085.0463 -2085.0463 -2148.8478 -2148.8478 246.9181 246.9181 77192.139 77192.139 -308.82832 -308.82832 Loop time of 79.9562 on 1 procs for 1000 steps with 2000 atoms Performance: 1.081 ns/day, 22.210 hours/ns, 12.507 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 79.321 | 79.321 | 79.321 | 0.0 | 99.21 Neigh | 0.15116 | 0.15116 | 0.15116 | 0.0 | 0.19 Comm | 0.080459 | 0.080459 | 0.080459 | 0.0 | 0.10 Output | 0.00021182 | 0.00021182 | 0.00021182 | 0.0 | 0.00 Modify | 0.34875 | 0.34875 | 0.34875 | 0.0 | 0.44 Other | | 0.05486 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2838 ave 2838 max 2838 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62838 ave 62838 max 62838 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62838 Ave neighs/atom = 31.419 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -2085.0463 -2085.0463 -2148.8478 -2148.8478 246.9181 246.9181 77192.139 77192.139 -308.82832 -308.82832 2000 -2091.894 -2091.894 -2157.4622 -2157.4622 253.75571 253.75571 76726.53 76726.53 -88.441783 -88.441783 Loop time of 79.5486 on 1 procs for 1000 steps with 2000 atoms Performance: 1.086 ns/day, 22.097 hours/ns, 12.571 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 78.932 | 78.932 | 78.932 | 0.0 | 99.22 Neigh | 0.15138 | 0.15138 | 0.15138 | 0.0 | 0.19 Comm | 0.077514 | 0.077514 | 0.077514 | 0.0 | 0.10 Output | 0.00020003 | 0.00020003 | 0.00020003 | 0.0 | 0.00 Modify | 0.33338 | 0.33338 | 0.33338 | 0.0 | 0.42 Other | | 0.05443 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2910 ave 2910 max 2910 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62550 ave 62550 max 62550 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62550 Ave neighs/atom = 31.275 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -2091.894 -2091.894 -2157.4622 -2157.4622 253.75571 253.75571 76726.53 76726.53 -88.441783 -88.441783 3000 -2091.3569 -2091.3569 -2157.1199 -2157.1199 254.50979 254.50979 76674.969 76674.969 120.9712 120.9712 Loop time of 79.5847 on 1 procs for 1000 steps with 2000 atoms Performance: 1.086 ns/day, 22.107 hours/ns, 12.565 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 78.967 | 78.967 | 78.967 | 0.0 | 99.22 Neigh | 0.15166 | 0.15166 | 0.15166 | 0.0 | 0.19 Comm | 0.077945 | 0.077945 | 0.077945 | 0.0 | 0.10 Output | 0.00019988 | 0.00019988 | 0.00019988 | 0.0 | 0.00 Modify | 0.33339 | 0.33339 | 0.33339 | 0.0 | 0.42 Other | | 0.05456 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2881 ave 2881 max 2881 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62658 ave 62658 max 62658 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62658 Ave neighs/atom = 31.329 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -2091.3569 -2091.3569 -2157.1199 -2157.1199 254.50979 254.50979 76674.969 76674.969 120.9712 120.9712 4000 -2091.1035 -2091.1035 -2155.71 -2155.71 250.03365 250.03365 76732.593 76732.593 8.621149 8.621149 Loop time of 79.6373 on 1 procs for 1000 steps with 2000 atoms Performance: 1.085 ns/day, 22.121 hours/ns, 12.557 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 79.02 | 79.02 | 79.02 | 0.0 | 99.22 Neigh | 0.15161 | 0.15161 | 0.15161 | 0.0 | 0.19 Comm | 0.077459 | 0.077459 | 0.077459 | 0.0 | 0.10 Output | 0.00020041 | 0.00020041 | 0.00020041 | 0.0 | 0.00 Modify | 0.33404 | 0.33404 | 0.33404 | 0.0 | 0.42 Other | | 0.0543 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2890 ave 2890 max 2890 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62152 ave 62152 max 62152 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62152 Ave neighs/atom = 31.076 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -2091.1035 -2091.1035 -2155.71 -2155.71 250.03365 250.03365 76732.593 76732.593 8.621149 8.621149 5000 -2090.0365 -2090.0365 -2155.2527 -2155.2527 252.39338 252.39338 76883.778 76883.778 -133.75085 -133.75085 Loop time of 81.2309 on 1 procs for 1000 steps with 2000 atoms Performance: 1.064 ns/day, 22.564 hours/ns, 12.311 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 80.584 | 80.584 | 80.584 | 0.0 | 99.20 Neigh | 0.16715 | 0.16715 | 0.16715 | 0.0 | 0.21 Comm | 0.079121 | 0.079121 | 0.079121 | 0.0 | 0.10 Output | 0.00021312 | 0.00021312 | 0.00021312 | 0.0 | 0.00 Modify | 0.3452 | 0.3452 | 0.3452 | 0.0 | 0.42 Other | | 0.05503 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2880 ave 2880 max 2880 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62518 ave 62518 max 62518 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62518 Ave neighs/atom = 31.259 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.097065193239, Press = -79.9181505919714 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -2090.0365 -2090.0365 -2155.2527 -2155.2527 252.39338 252.39338 76883.778 76883.778 -133.75085 -133.75085 6000 -2091.4631 -2091.4631 -2157.5091 -2157.5091 255.60476 255.60476 76442.764 76442.764 256.82924 256.82924 Loop time of 92.9591 on 1 procs for 1000 steps with 2000 atoms Performance: 0.929 ns/day, 25.822 hours/ns, 10.757 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 92.201 | 92.201 | 92.201 | 0.0 | 99.18 Neigh | 0.17943 | 0.17943 | 0.17943 | 0.0 | 0.19 Comm | 0.088223 | 0.088223 | 0.088223 | 0.0 | 0.09 Output | 0.00021689 | 0.00021689 | 0.00021689 | 0.0 | 0.00 Modify | 0.43048 | 0.43048 | 0.43048 | 0.0 | 0.46 Other | | 0.05933 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2902 ave 2902 max 2902 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62918 ave 62918 max 62918 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62918 Ave neighs/atom = 31.459 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.606960305817, Press = -8.63613127301441 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -2091.4631 -2091.4631 -2157.5091 -2157.5091 255.60476 255.60476 76442.764 76442.764 256.82924 256.82924 7000 -2090.2771 -2090.2771 -2156.3728 -2156.3728 255.79724 255.79724 77071.499 77071.499 -410.03172 -410.03172 Loop time of 92.902 on 1 procs for 1000 steps with 2000 atoms Performance: 0.930 ns/day, 25.806 hours/ns, 10.764 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 92.139 | 92.139 | 92.139 | 0.0 | 99.18 Neigh | 0.17853 | 0.17853 | 0.17853 | 0.0 | 0.19 Comm | 0.089142 | 0.089142 | 0.089142 | 0.0 | 0.10 Output | 0.00026687 | 0.00026687 | 0.00026687 | 0.0 | 0.00 Modify | 0.43544 | 0.43544 | 0.43544 | 0.0 | 0.47 Other | | 0.06008 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2881 ave 2881 max 2881 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 61952 ave 61952 max 61952 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 61952 Ave neighs/atom = 30.976 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.695223580037, Press = -16.1211779390054 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -2090.2771 -2090.2771 -2156.3728 -2156.3728 255.79724 255.79724 77071.499 77071.499 -410.03172 -410.03172 8000 -2088.4589 -2088.4589 -2153.6659 -2153.6659 252.35803 252.35803 76871.358 76871.358 62.83069 62.83069 Loop time of 80.4924 on 1 procs for 1000 steps with 2000 atoms Performance: 1.073 ns/day, 22.359 hours/ns, 12.424 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 79.833 | 79.833 | 79.833 | 0.0 | 99.18 Neigh | 0.16646 | 0.16646 | 0.16646 | 0.0 | 0.21 Comm | 0.080035 | 0.080035 | 0.080035 | 0.0 | 0.10 Output | 0.00016746 | 0.00016746 | 0.00016746 | 0.0 | 0.00 Modify | 0.35868 | 0.35868 | 0.35868 | 0.0 | 0.45 Other | | 0.05387 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2895 ave 2895 max 2895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62706 ave 62706 max 62706 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62706 Ave neighs/atom = 31.353 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.586235230256, Press = 1.84008808390517 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -2088.4589 -2088.4589 -2153.6659 -2153.6659 252.35803 252.35803 76871.358 76871.358 62.83069 62.83069 9000 -2090.9839 -2090.9839 -2156.7846 -2156.7846 254.65576 254.65576 76561.131 76561.131 177.34429 177.34429 Loop time of 80.1121 on 1 procs for 1000 steps with 2000 atoms Performance: 1.078 ns/day, 22.253 hours/ns, 12.483 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 79.457 | 79.457 | 79.457 | 0.0 | 99.18 Neigh | 0.16613 | 0.16613 | 0.16613 | 0.0 | 0.21 Comm | 0.079996 | 0.079996 | 0.079996 | 0.0 | 0.10 Output | 0.00016917 | 0.00016917 | 0.00016917 | 0.0 | 0.00 Modify | 0.35469 | 0.35469 | 0.35469 | 0.0 | 0.44 Other | | 0.0538 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2880 ave 2880 max 2880 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62870 ave 62870 max 62870 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62870 Ave neighs/atom = 31.435 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.474279271227, Press = -1.1448609357623 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -2090.9839 -2090.9839 -2156.7846 -2156.7846 254.65576 254.65576 76561.131 76561.131 177.34429 177.34429 10000 -2091.1025 -2091.1025 -2155.4673 -2155.4673 249.09813 249.09813 76770.747 76770.747 -81.59001 -81.59001 Loop time of 80.026 on 1 procs for 1000 steps with 2000 atoms Performance: 1.080 ns/day, 22.229 hours/ns, 12.496 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 79.385 | 79.385 | 79.385 | 0.0 | 99.20 Neigh | 0.15214 | 0.15214 | 0.15214 | 0.0 | 0.19 Comm | 0.079243 | 0.079243 | 0.079243 | 0.0 | 0.10 Output | 0.00017052 | 0.00017052 | 0.00017052 | 0.0 | 0.00 Modify | 0.35523 | 0.35523 | 0.35523 | 0.0 | 0.44 Other | | 0.05425 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2884 ave 2884 max 2884 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62572 ave 62572 max 62572 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62572 Ave neighs/atom = 31.286 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.339126408344, Press = -3.27499840632134 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -2091.1025 -2091.1025 -2155.4673 -2155.4673 249.09813 249.09813 76770.747 76770.747 -81.59001 -81.59001 11000 -2087.3335 -2087.3335 -2153.5781 -2153.5781 256.37349 256.37349 76927.132 76927.132 -178.70415 -178.70415 Loop time of 80.2096 on 1 procs for 1000 steps with 2000 atoms Performance: 1.077 ns/day, 22.280 hours/ns, 12.467 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 79.554 | 79.554 | 79.554 | 0.0 | 99.18 Neigh | 0.16596 | 0.16596 | 0.16596 | 0.0 | 0.21 Comm | 0.080082 | 0.080082 | 0.080082 | 0.0 | 0.10 Output | 0.00016713 | 0.00016713 | 0.00016713 | 0.0 | 0.00 Modify | 0.35524 | 0.35524 | 0.35524 | 0.0 | 0.44 Other | | 0.05414 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2873 ave 2873 max 2873 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62440 ave 62440 max 62440 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62440 Ave neighs/atom = 31.22 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.504047243545, Press = -0.983172080650373 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -2087.3335 -2087.3335 -2153.5781 -2153.5781 256.37349 256.37349 76927.132 76927.132 -178.70415 -178.70415 12000 -2090.738 -2090.738 -2155.5001 -2155.5001 250.63604 250.63604 76739.224 76739.224 29.855674 29.855674 Loop time of 80.015 on 1 procs for 1000 steps with 2000 atoms Performance: 1.080 ns/day, 22.226 hours/ns, 12.498 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 79.358 | 79.358 | 79.358 | 0.0 | 99.18 Neigh | 0.16603 | 0.16603 | 0.16603 | 0.0 | 0.21 Comm | 0.080249 | 0.080249 | 0.080249 | 0.0 | 0.10 Output | 0.00016865 | 0.00016865 | 0.00016865 | 0.0 | 0.00 Modify | 0.35637 | 0.35637 | 0.35637 | 0.0 | 0.45 Other | | 0.05404 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2891 ave 2891 max 2891 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62530 ave 62530 max 62530 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62530 Ave neighs/atom = 31.265 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.70374315876, Press = -2.00466473039047 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -2090.738 -2090.738 -2155.5001 -2155.5001 250.63604 250.63604 76739.224 76739.224 29.855674 29.855674 13000 -2089.4871 -2089.4871 -2154.9031 -2154.9031 253.16699 253.16699 76781.58 76781.58 -113.52474 -113.52474 Loop time of 79.9667 on 1 procs for 1000 steps with 2000 atoms Performance: 1.080 ns/day, 22.213 hours/ns, 12.505 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 79.324 | 79.324 | 79.324 | 0.0 | 99.20 Neigh | 0.153 | 0.153 | 0.153 | 0.0 | 0.19 Comm | 0.079776 | 0.079776 | 0.079776 | 0.0 | 0.10 Output | 0.00016971 | 0.00016971 | 0.00016971 | 0.0 | 0.00 Modify | 0.35595 | 0.35595 | 0.35595 | 0.0 | 0.45 Other | | 0.05379 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2900 ave 2900 max 2900 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62662 ave 62662 max 62662 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62662 Ave neighs/atom = 31.331 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.688201465621, Press = -1.72541702320006 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -2089.4871 -2089.4871 -2154.9031 -2154.9031 253.16699 253.16699 76781.58 76781.58 -113.52474 -113.52474 14000 -2088.9672 -2088.9672 -2154.5977 -2154.5977 253.99687 253.99687 76742.915 76742.915 29.864722 29.864722 Loop time of 88.1564 on 1 procs for 1000 steps with 2000 atoms Performance: 0.980 ns/day, 24.488 hours/ns, 11.343 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 87.452 | 87.452 | 87.452 | 0.0 | 99.20 Neigh | 0.15979 | 0.15979 | 0.15979 | 0.0 | 0.18 Comm | 0.085232 | 0.085232 | 0.085232 | 0.0 | 0.10 Output | 0.00021336 | 0.00021336 | 0.00021336 | 0.0 | 0.00 Modify | 0.40132 | 0.40132 | 0.40132 | 0.0 | 0.46 Other | | 0.05833 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2892 ave 2892 max 2892 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62474 ave 62474 max 62474 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62474 Ave neighs/atom = 31.237 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.803999606099, Press = -1.91717721592774 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -2088.9672 -2088.9672 -2154.5977 -2154.5977 253.99687 253.99687 76742.915 76742.915 29.864722 29.864722 15000 -2090.7599 -2090.7599 -2155.3943 -2155.3943 250.14183 250.14183 76781.476 76781.476 -16.501887 -16.501887 Loop time of 80.853 on 1 procs for 1000 steps with 2000 atoms Performance: 1.069 ns/day, 22.459 hours/ns, 12.368 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 80.191 | 80.191 | 80.191 | 0.0 | 99.18 Neigh | 0.16643 | 0.16643 | 0.16643 | 0.0 | 0.21 Comm | 0.079433 | 0.079433 | 0.079433 | 0.0 | 0.10 Output | 0.00016849 | 0.00016849 | 0.00016849 | 0.0 | 0.00 Modify | 0.3606 | 0.3606 | 0.3606 | 0.0 | 0.45 Other | | 0.05506 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2878 ave 2878 max 2878 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62510 ave 62510 max 62510 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62510 Ave neighs/atom = 31.255 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.925311386175, Press = -1.04379985516776 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -2090.7599 -2090.7599 -2155.3943 -2155.3943 250.14183 250.14183 76781.476 76781.476 -16.501887 -16.501887 16000 -2088.4408 -2088.4408 -2154.1148 -2154.1148 254.16513 254.16513 76732.822 76732.822 129.72355 129.72355 Loop time of 79.5851 on 1 procs for 1000 steps with 2000 atoms Performance: 1.086 ns/day, 22.107 hours/ns, 12.565 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 78.945 | 78.945 | 78.945 | 0.0 | 99.20 Neigh | 0.15129 | 0.15129 | 0.15129 | 0.0 | 0.19 Comm | 0.078113 | 0.078113 | 0.078113 | 0.0 | 0.10 Output | 0.00016753 | 0.00016753 | 0.00016753 | 0.0 | 0.00 Modify | 0.35518 | 0.35518 | 0.35518 | 0.0 | 0.45 Other | | 0.05529 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2873 ave 2873 max 2873 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62680 ave 62680 max 62680 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62680 Ave neighs/atom = 31.34 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.826583000049, Press = -2.44531685267877 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -2088.4408 -2088.4408 -2154.1148 -2154.1148 254.16513 254.16513 76732.822 76732.822 129.72355 129.72355 17000 -2089.8906 -2089.8906 -2155.3622 -2155.3622 253.38179 253.38179 76961.899 76961.899 -158.10733 -158.10733 Loop time of 79.6101 on 1 procs for 1000 steps with 2000 atoms Performance: 1.085 ns/day, 22.114 hours/ns, 12.561 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 78.957 | 78.957 | 78.957 | 0.0 | 99.18 Neigh | 0.16515 | 0.16515 | 0.16515 | 0.0 | 0.21 Comm | 0.078161 | 0.078161 | 0.078161 | 0.0 | 0.10 Output | 0.00019829 | 0.00019829 | 0.00019829 | 0.0 | 0.00 Modify | 0.35481 | 0.35481 | 0.35481 | 0.0 | 0.45 Other | | 0.05495 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2873 ave 2873 max 2873 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62590 ave 62590 max 62590 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62590 Ave neighs/atom = 31.295 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.857899150285, Press = -0.61532259674229 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -2089.8906 -2089.8906 -2155.3622 -2155.3622 253.38179 253.38179 76961.899 76961.899 -158.10733 -158.10733 18000 -2086.2864 -2086.2864 -2153.1769 -2153.1769 258.8732 258.8732 76662.999 76662.999 287.00819 287.00819 Loop time of 79.9098 on 1 procs for 1000 steps with 2000 atoms Performance: 1.081 ns/day, 22.197 hours/ns, 12.514 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 79.254 | 79.254 | 79.254 | 0.0 | 99.18 Neigh | 0.16628 | 0.16628 | 0.16628 | 0.0 | 0.21 Comm | 0.079465 | 0.079465 | 0.079465 | 0.0 | 0.10 Output | 0.00016851 | 0.00016851 | 0.00016851 | 0.0 | 0.00 Modify | 0.35573 | 0.35573 | 0.35573 | 0.0 | 0.45 Other | | 0.05458 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2891 ave 2891 max 2891 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62640 ave 62640 max 62640 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62640 Ave neighs/atom = 31.32 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.127658180367, Press = -0.438412092896876 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -2086.2864 -2086.2864 -2153.1769 -2153.1769 258.8732 258.8732 76662.999 76662.999 287.00819 287.00819 19000 -2090.7312 -2090.7312 -2158.369 -2158.369 261.76526 261.76526 76577.841 76577.841 0.35699285 0.35699285 Loop time of 80.2628 on 1 procs for 1000 steps with 2000 atoms Performance: 1.076 ns/day, 22.295 hours/ns, 12.459 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 79.621 | 79.621 | 79.621 | 0.0 | 99.20 Neigh | 0.1518 | 0.1518 | 0.1518 | 0.0 | 0.19 Comm | 0.078817 | 0.078817 | 0.078817 | 0.0 | 0.10 Output | 0.00016613 | 0.00016613 | 0.00016613 | 0.0 | 0.00 Modify | 0.35699 | 0.35699 | 0.35699 | 0.0 | 0.44 Other | | 0.05415 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2913 ave 2913 max 2913 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62448 ave 62448 max 62448 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62448 Ave neighs/atom = 31.224 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.206868064198, Press = -1.22725290025692 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -2090.7312 -2090.7312 -2158.369 -2158.369 261.76526 261.76526 76577.841 76577.841 0.35699285 0.35699285 20000 -2089.1025 -2089.1025 -2154.7161 -2154.7161 253.93135 253.93135 77116.522 77116.522 -285.36832 -285.36832 Loop time of 79.6163 on 1 procs for 1000 steps with 2000 atoms Performance: 1.085 ns/day, 22.116 hours/ns, 12.560 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 78.966 | 78.966 | 78.966 | 0.0 | 99.18 Neigh | 0.1652 | 0.1652 | 0.1652 | 0.0 | 0.21 Comm | 0.07775 | 0.07775 | 0.07775 | 0.0 | 0.10 Output | 0.00016686 | 0.00016686 | 0.00016686 | 0.0 | 0.00 Modify | 0.35272 | 0.35272 | 0.35272 | 0.0 | 0.44 Other | | 0.05417 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2879 ave 2879 max 2879 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62256 ave 62256 max 62256 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62256 Ave neighs/atom = 31.128 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.300130376512, Press = -1.10974448666456 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -2089.1025 -2089.1025 -2154.7161 -2154.7161 253.93135 253.93135 77116.522 77116.522 -285.36832 -285.36832 21000 -2090.5746 -2090.5746 -2154.9961 -2154.9961 249.31777 249.31777 76563.093 76563.093 242.5626 242.5626 Loop time of 79.5565 on 1 procs for 1000 steps with 2000 atoms Performance: 1.086 ns/day, 22.099 hours/ns, 12.570 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 78.905 | 78.905 | 78.905 | 0.0 | 99.18 Neigh | 0.16524 | 0.16524 | 0.16524 | 0.0 | 0.21 Comm | 0.078241 | 0.078241 | 0.078241 | 0.0 | 0.10 Output | 0.00016757 | 0.00016757 | 0.00016757 | 0.0 | 0.00 Modify | 0.35365 | 0.35365 | 0.35365 | 0.0 | 0.44 Other | | 0.05449 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2908 ave 2908 max 2908 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62812 ave 62812 max 62812 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62812 Ave neighs/atom = 31.406 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.257668126324, Press = -0.253742862526286 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -2090.5746 -2090.5746 -2154.9961 -2154.9961 249.31777 249.31777 76563.093 76563.093 242.5626 242.5626 22000 -2092.0455 -2092.0455 -2157.3256 -2157.3256 252.64071 252.64071 76520.911 76520.911 104.05708 104.05708 Loop time of 79.6255 on 1 procs for 1000 steps with 2000 atoms Performance: 1.085 ns/day, 22.118 hours/ns, 12.559 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 78.975 | 78.975 | 78.975 | 0.0 | 99.18 Neigh | 0.16491 | 0.16491 | 0.16491 | 0.0 | 0.21 Comm | 0.078073 | 0.078073 | 0.078073 | 0.0 | 0.10 Output | 0.00016745 | 0.00016745 | 0.00016745 | 0.0 | 0.00 Modify | 0.35317 | 0.35317 | 0.35317 | 0.0 | 0.44 Other | | 0.05392 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2908 ave 2908 max 2908 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62348 ave 62348 max 62348 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62348 Ave neighs/atom = 31.174 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.272035599286, Press = -2.07196655088794 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -2092.0455 -2092.0455 -2157.3256 -2157.3256 252.64071 252.64071 76520.911 76520.911 104.05708 104.05708 23000 -2088.1753 -2088.1753 -2154.0077 -2154.0077 254.77799 254.77799 77035.29 77035.29 -370.17191 -370.17191 Loop time of 79.9931 on 1 procs for 1000 steps with 2000 atoms Performance: 1.080 ns/day, 22.220 hours/ns, 12.501 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 79.354 | 79.354 | 79.354 | 0.0 | 99.20 Neigh | 0.1519 | 0.1519 | 0.1519 | 0.0 | 0.19 Comm | 0.078661 | 0.078661 | 0.078661 | 0.0 | 0.10 Output | 0.00016731 | 0.00016731 | 0.00016731 | 0.0 | 0.00 Modify | 0.35466 | 0.35466 | 0.35466 | 0.0 | 0.44 Other | | 0.0541 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2906 ave 2906 max 2906 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62574 ave 62574 max 62574 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62574 Ave neighs/atom = 31.287 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.203576634184, Press = -0.59651840942918 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -2088.1753 -2088.1753 -2154.0077 -2154.0077 254.77799 254.77799 77035.29 77035.29 -370.17191 -370.17191 24000 -2087.8864 -2087.8864 -2154.7218 -2154.7218 258.66006 258.66006 76722.651 76722.651 125.01665 125.01665 Loop time of 79.4378 on 1 procs for 1000 steps with 2000 atoms Performance: 1.088 ns/day, 22.066 hours/ns, 12.588 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 78.802 | 78.802 | 78.802 | 0.0 | 99.20 Neigh | 0.15154 | 0.15154 | 0.15154 | 0.0 | 0.19 Comm | 0.07748 | 0.07748 | 0.07748 | 0.0 | 0.10 Output | 0.0001665 | 0.0001665 | 0.0001665 | 0.0 | 0.00 Modify | 0.35282 | 0.35282 | 0.35282 | 0.0 | 0.44 Other | | 0.05411 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2879 ave 2879 max 2879 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62920 ave 62920 max 62920 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62920 Ave neighs/atom = 31.46 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 76747.7627742931 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0