# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.195095829665661*${_u_distance} variable latticeconst_converted equal 4.195095829665661*1 lattice bcc ${latticeconst_converted} lattice bcc 4.19509582966566 Lattice spacing in x,y,z = 4.1950958 4.1950958 4.1950958 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (41.950958 41.950958 41.950958) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms create_atoms CPU = 0.000 seconds variable mass_converted equal 22.98977*${_u_mass} variable mass_converted equal 22.98977*1 kim_interactions Na #=== BEGIN kim_interactions ================================== pair_style kim MEAM_LAMMPS_KimKoLee_2020_NaSn__MO_329881861557_000 pair_coeff * * Na #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 22.98977 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 73828.7742291291 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 73828.7742291291/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 73828.7742291291/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 73828.7742291291/(1*1*${_u_distance}) variable V0_metal equal 73828.7742291291/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 73828.7742291291*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 73828.7742291291 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -2145.0192 -2145.0192 -2225.9344 -2225.9344 313.15 313.15 73828.774 73828.774 1170.6385 1170.6385 1000 -2050.8334 -2050.8334 -2131.0125 -2131.0125 310.3012 310.3012 77921.564 77921.564 -272.08541 -272.08541 Loop time of 32.2804 on 1 procs for 1000 steps with 2000 atoms Performance: 2.677 ns/day, 8.967 hours/ns, 30.979 timesteps/s 65.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 32.038 | 32.038 | 32.038 | 0.0 | 99.25 Neigh | 0.069521 | 0.069521 | 0.069521 | 0.0 | 0.22 Comm | 0.051434 | 0.051434 | 0.051434 | 0.0 | 0.16 Output | 4.8e-05 | 4.8e-05 | 4.8e-05 | 0.0 | 0.00 Modify | 0.11126 | 0.11126 | 0.11126 | 0.0 | 0.34 Other | | 0.01025 | | | 0.03 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2777.00 ave 2777 max 2777 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 63326.0 ave 63326 max 63326 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 63326 Ave neighs/atom = 31.663000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -2050.8334 -2050.8334 -2131.0125 -2131.0125 310.3012 310.3012 77921.564 77921.564 -272.08541 -272.08541 2000 -2057.0877 -2057.0877 -2137.9137 -2137.9137 312.80503 312.80503 77485.571 77485.571 -89.924292 -89.924292 Loop time of 31.9028 on 1 procs for 1000 steps with 2000 atoms Performance: 2.708 ns/day, 8.862 hours/ns, 31.345 timesteps/s 68.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.694 | 31.694 | 31.694 | 0.0 | 99.35 Neigh | 0.051896 | 0.051896 | 0.051896 | 0.0 | 0.16 Comm | 0.040262 | 0.040262 | 0.040262 | 0.0 | 0.13 Output | 3.76e-05 | 3.76e-05 | 3.76e-05 | 0.0 | 0.00 Modify | 0.1061 | 0.1061 | 0.1061 | 0.0 | 0.33 Other | | 0.009993 | | | 0.03 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2849.00 ave 2849 max 2849 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 63018.0 ave 63018 max 63018 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 63018 Ave neighs/atom = 31.509000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -2057.0877 -2057.0877 -2137.9137 -2137.9137 312.80503 312.80503 77485.571 77485.571 -89.924292 -89.924292 3000 -2056.753 -2056.753 -2136.1822 -2136.1822 307.39914 307.39914 77364.336 77364.336 261.61148 261.61148 Loop time of 29.2765 on 1 procs for 1000 steps with 2000 atoms Performance: 2.951 ns/day, 8.132 hours/ns, 34.157 timesteps/s 73.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.078 | 29.078 | 29.078 | 0.0 | 99.32 Neigh | 0.043691 | 0.043691 | 0.043691 | 0.0 | 0.15 Comm | 0.019956 | 0.019956 | 0.019956 | 0.0 | 0.07 Output | 4.28e-05 | 4.28e-05 | 4.28e-05 | 0.0 | 0.00 Modify | 0.12509 | 0.12509 | 0.12509 | 0.0 | 0.43 Other | | 0.01001 | | | 0.03 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2846.00 ave 2846 max 2846 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62952.0 ave 62952 max 62952 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62952 Ave neighs/atom = 31.476000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -2056.753 -2056.753 -2136.1822 -2136.1822 307.39914 307.39914 77364.336 77364.336 261.61148 261.61148 4000 -2054.6305 -2054.6305 -2137.2734 -2137.2734 319.83634 319.83634 77703.15 77703.15 -339.37664 -339.37664 Loop time of 31.8369 on 1 procs for 1000 steps with 2000 atoms Performance: 2.714 ns/day, 8.844 hours/ns, 31.410 timesteps/s 68.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.572 | 31.572 | 31.572 | 0.0 | 99.17 Neigh | 0.10959 | 0.10959 | 0.10959 | 0.0 | 0.34 Comm | 0.040039 | 0.040039 | 0.040039 | 0.0 | 0.13 Output | 4.49e-05 | 4.49e-05 | 4.49e-05 | 0.0 | 0.00 Modify | 0.10506 | 0.10506 | 0.10506 | 0.0 | 0.33 Other | | 0.01003 | | | 0.03 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2852.00 ave 2852 max 2852 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62610.0 ave 62610 max 62610 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62610 Ave neighs/atom = 31.305000 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -2054.6305 -2054.6305 -2137.2734 -2137.2734 319.83634 319.83634 77703.15 77703.15 -339.37664 -339.37664 5000 -2056.8305 -2056.8305 -2138.3168 -2138.3168 315.36036 315.36036 77412.673 77412.673 46.250123 46.250123 Loop time of 31.994 on 1 procs for 1000 steps with 2000 atoms Performance: 2.701 ns/day, 8.887 hours/ns, 31.256 timesteps/s 67.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.816 | 31.816 | 31.816 | 0.0 | 99.44 Neigh | 0.062625 | 0.062625 | 0.062625 | 0.0 | 0.20 Comm | 0.019943 | 0.019943 | 0.019943 | 0.0 | 0.06 Output | 3.8e-05 | 3.8e-05 | 3.8e-05 | 0.0 | 0.00 Modify | 0.085977 | 0.085977 | 0.085977 | 0.0 | 0.27 Other | | 0.009916 | | | 0.03 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2829.00 ave 2829 max 2829 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62892.0 ave 62892 max 62892 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62892 Ave neighs/atom = 31.446000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.990354356078, Press = -60.498492363124 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -2056.8305 -2056.8305 -2138.3168 -2138.3168 315.36036 315.36036 77412.673 77412.673 46.250123 46.250123 6000 -2054.3045 -2054.3045 -2136.5563 -2136.5563 318.32299 318.32299 77499.58 77499.58 -33.040831 -33.040831 Loop time of 33.4552 on 1 procs for 1000 steps with 2000 atoms Performance: 2.583 ns/day, 9.293 hours/ns, 29.891 timesteps/s 64.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.231 | 33.231 | 33.231 | 0.0 | 99.33 Neigh | 0.06357 | 0.06357 | 0.06357 | 0.0 | 0.19 Comm | 0.019932 | 0.019932 | 0.019932 | 0.0 | 0.06 Output | 2.81e-05 | 2.81e-05 | 2.81e-05 | 0.0 | 0.00 Modify | 0.13047 | 0.13047 | 0.13047 | 0.0 | 0.39 Other | | 0.01007 | | | 0.03 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2840.00 ave 2840 max 2840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62838.0 ave 62838 max 62838 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62838 Ave neighs/atom = 31.419000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.873542027664, Press = 0.18147447141429 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -2054.3045 -2054.3045 -2136.5563 -2136.5563 318.32299 318.32299 77499.58 77499.58 -33.040831 -33.040831 7000 -2056.3661 -2056.3661 -2137.4153 -2137.4153 313.66882 313.66882 77792.898 77792.898 -352.63239 -352.63239 Loop time of 31.7283 on 1 procs for 1000 steps with 2000 atoms Performance: 2.723 ns/day, 8.813 hours/ns, 31.518 timesteps/s 68.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.484 | 31.484 | 31.484 | 0.0 | 99.23 Neigh | 0.042087 | 0.042087 | 0.042087 | 0.0 | 0.13 Comm | 0.020124 | 0.020124 | 0.020124 | 0.0 | 0.06 Output | 3.88e-05 | 3.88e-05 | 3.88e-05 | 0.0 | 0.00 Modify | 0.17159 | 0.17159 | 0.17159 | 0.0 | 0.54 Other | | 0.01015 | | | 0.03 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2855.00 ave 2855 max 2855 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62678.0 ave 62678 max 62678 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62678 Ave neighs/atom = 31.339000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.540553490077, Press = -0.34208316989727 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -2056.3661 -2056.3661 -2137.4153 -2137.4153 313.66882 313.66882 77792.898 77792.898 -352.63239 -352.63239 8000 -2054.3094 -2054.3094 -2136.0925 -2136.0925 316.50931 316.50931 77376.832 77376.832 229.64674 229.64674 Loop time of 31.9955 on 1 procs for 1000 steps with 2000 atoms Performance: 2.700 ns/day, 8.888 hours/ns, 31.254 timesteps/s 67.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.763 | 31.763 | 31.763 | 0.0 | 99.27 Neigh | 0.058135 | 0.058135 | 0.058135 | 0.0 | 0.18 Comm | 0.020054 | 0.020054 | 0.020054 | 0.0 | 0.06 Output | 3.02e-05 | 3.02e-05 | 3.02e-05 | 0.0 | 0.00 Modify | 0.12402 | 0.12402 | 0.12402 | 0.0 | 0.39 Other | | 0.03004 | | | 0.09 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2881.00 ave 2881 max 2881 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 63154.0 ave 63154 max 63154 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 63154 Ave neighs/atom = 31.577000 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 314.149405537409, Press = -6.65790535516591 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -2054.3094 -2054.3094 -2136.0925 -2136.0925 316.50931 316.50931 77376.832 77376.832 229.64674 229.64674 9000 -2059.7968 -2059.7968 -2139.4299 -2139.4299 308.18822 308.18822 77499.006 77499.006 -133.44206 -133.44206 Loop time of 31.5315 on 1 procs for 1000 steps with 2000 atoms Performance: 2.740 ns/day, 8.759 hours/ns, 31.714 timesteps/s 69.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.349 | 31.349 | 31.349 | 0.0 | 99.42 Neigh | 0.042451 | 0.042451 | 0.042451 | 0.0 | 0.13 Comm | 0.019991 | 0.019991 | 0.019991 | 0.0 | 0.06 Output | 3.36e-05 | 3.36e-05 | 3.36e-05 | 0.0 | 0.00 Modify | 0.11047 | 0.11047 | 0.11047 | 0.0 | 0.35 Other | | 0.01 | | | 0.03 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2829.00 ave 2829 max 2829 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 63476.0 ave 63476 max 63476 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 63476 Ave neighs/atom = 31.738000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.187362872156, Press = 5.83139014728937 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -2059.7968 -2059.7968 -2139.4299 -2139.4299 308.18822 308.18822 77499.006 77499.006 -133.44206 -133.44206 10000 -2059.6705 -2059.6705 -2139.5166 -2139.5166 309.01281 309.01281 77357.917 77357.917 -11.202291 -11.202291 Loop time of 35.4731 on 1 procs for 1000 steps with 2000 atoms Performance: 2.436 ns/day, 9.854 hours/ns, 28.190 timesteps/s 60.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.187 | 35.187 | 35.187 | 0.0 | 99.19 Neigh | 0.06215 | 0.06215 | 0.06215 | 0.0 | 0.18 Comm | 0.020727 | 0.020727 | 0.020727 | 0.0 | 0.06 Output | 0.0004378 | 0.0004378 | 0.0004378 | 0.0 | 0.00 Modify | 0.19218 | 0.19218 | 0.19218 | 0.0 | 0.54 Other | | 0.01014 | | | 0.03 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2840.00 ave 2840 max 2840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 63094.0 ave 63094 max 63094 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 63094 Ave neighs/atom = 31.547000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.903731831069, Press = -6.43631757559962 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -2059.6705 -2059.6705 -2139.5166 -2139.5166 309.01281 309.01281 77357.917 77357.917 -11.202291 -11.202291 11000 -2053.6794 -2053.6794 -2135.7191 -2135.7191 317.50212 317.50212 77397.55 77397.55 233.60531 233.60531 Loop time of 27.8231 on 1 procs for 1000 steps with 2000 atoms Performance: 3.105 ns/day, 7.729 hours/ns, 35.941 timesteps/s 77.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.637 | 27.637 | 27.637 | 0.0 | 99.33 Neigh | 0.046657 | 0.046657 | 0.046657 | 0.0 | 0.17 Comm | 0.020022 | 0.020022 | 0.020022 | 0.0 | 0.07 Output | 3.21e-05 | 3.21e-05 | 3.21e-05 | 0.0 | 0.00 Modify | 0.089823 | 0.089823 | 0.089823 | 0.0 | 0.32 Other | | 0.02993 | | | 0.11 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2860.00 ave 2860 max 2860 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 63364.0 ave 63364 max 63364 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 63364 Ave neighs/atom = 31.682000 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.982295825025, Press = 0.970317345204832 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -2053.6794 -2053.6794 -2135.7191 -2135.7191 317.50212 317.50212 77397.55 77397.55 233.60531 233.60531 12000 -2056.9693 -2056.9693 -2136.8035 -2136.8035 308.96674 308.96674 77718.021 77718.021 -222.08165 -222.08165 Loop time of 30.1165 on 1 procs for 1000 steps with 2000 atoms Performance: 2.869 ns/day, 8.366 hours/ns, 33.204 timesteps/s 71.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.882 | 29.882 | 29.882 | 0.0 | 99.22 Neigh | 0.065935 | 0.065935 | 0.065935 | 0.0 | 0.22 Comm | 0.029992 | 0.029992 | 0.029992 | 0.0 | 0.10 Output | 3.18e-05 | 3.18e-05 | 3.18e-05 | 0.0 | 0.00 Modify | 0.12918 | 0.12918 | 0.12918 | 0.0 | 0.43 Other | | 0.009818 | | | 0.03 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2840.00 ave 2840 max 2840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62796.0 ave 62796 max 62796 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62796 Ave neighs/atom = 31.398000 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.858802756621, Press = -0.817067966713922 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -2056.9693 -2056.9693 -2136.8035 -2136.8035 308.96674 308.96674 77718.021 77718.021 -222.08165 -222.08165 13000 -2055.8665 -2055.8665 -2137.4282 -2137.4282 315.65198 315.65198 77315.864 77315.864 191.33956 191.33956 Loop time of 32.088 on 1 procs for 1000 steps with 2000 atoms Performance: 2.693 ns/day, 8.913 hours/ns, 31.164 timesteps/s 67.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.816 | 31.816 | 31.816 | 0.0 | 99.15 Neigh | 0.0624 | 0.0624 | 0.0624 | 0.0 | 0.19 Comm | 0.060026 | 0.060026 | 0.060026 | 0.0 | 0.19 Output | 3.24e-05 | 3.24e-05 | 3.24e-05 | 0.0 | 0.00 Modify | 0.13987 | 0.13987 | 0.13987 | 0.0 | 0.44 Other | | 0.009934 | | | 0.03 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2844.00 ave 2844 max 2844 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62780.0 ave 62780 max 62780 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62780 Ave neighs/atom = 31.390000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.918484868654, Press = -1.24373039974037 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -2055.8665 -2055.8665 -2137.4282 -2137.4282 315.65198 315.65198 77315.864 77315.864 191.33956 191.33956 14000 -2057.6724 -2057.6724 -2138.5031 -2138.5031 312.82303 312.82303 77535.239 77535.239 -190.23644 -190.23644 Loop time of 31.3558 on 1 procs for 1000 steps with 2000 atoms Performance: 2.755 ns/day, 8.710 hours/ns, 31.892 timesteps/s 69.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.132 | 31.132 | 31.132 | 0.0 | 99.29 Neigh | 0.083644 | 0.083644 | 0.083644 | 0.0 | 0.27 Comm | 0.040072 | 0.040072 | 0.040072 | 0.0 | 0.13 Output | 3.06e-05 | 3.06e-05 | 3.06e-05 | 0.0 | 0.00 Modify | 0.090043 | 0.090043 | 0.090043 | 0.0 | 0.29 Other | | 0.009975 | | | 0.03 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2852.00 ave 2852 max 2852 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 63140.0 ave 63140 max 63140 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 63140 Ave neighs/atom = 31.570000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.705774216116, Press = 1.52329934710079 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -2057.6724 -2057.6724 -2138.5031 -2138.5031 312.82303 312.82303 77535.239 77535.239 -190.23644 -190.23644 15000 -2060.2804 -2060.2804 -2140.4851 -2140.4851 310.40048 310.40048 77562.868 77562.868 -216.19202 -216.19202 Loop time of 27.6186 on 1 procs for 1000 steps with 2000 atoms Performance: 3.128 ns/day, 7.672 hours/ns, 36.207 timesteps/s 78.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.295 | 27.295 | 27.295 | 0.0 | 98.83 Neigh | 0.063424 | 0.063424 | 0.063424 | 0.0 | 0.23 Comm | 0.020122 | 0.020122 | 0.020122 | 0.0 | 0.07 Output | 2.49e-05 | 2.49e-05 | 2.49e-05 | 0.0 | 0.00 Modify | 0.22987 | 0.22987 | 0.22987 | 0.0 | 0.83 Other | | 0.01027 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2834.00 ave 2834 max 2834 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62610.0 ave 62610 max 62610 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62610 Ave neighs/atom = 31.305000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.743035427272, Press = -2.22502464383704 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -2060.2804 -2060.2804 -2140.4851 -2140.4851 310.40048 310.40048 77562.868 77562.868 -216.19202 -216.19202 16000 -2053.947 -2053.947 -2137.0654 -2137.0654 321.67673 321.67673 77183.237 77183.237 316.41529 316.41529 Loop time of 30.3887 on 1 procs for 1000 steps with 2000 atoms Performance: 2.843 ns/day, 8.441 hours/ns, 32.907 timesteps/s 71.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.187 | 30.187 | 30.187 | 0.0 | 99.34 Neigh | 0.047059 | 0.047059 | 0.047059 | 0.0 | 0.15 Comm | 0.020039 | 0.020039 | 0.020039 | 0.0 | 0.07 Output | 3.21e-05 | 3.21e-05 | 3.21e-05 | 0.0 | 0.00 Modify | 0.12461 | 0.12461 | 0.12461 | 0.0 | 0.41 Other | | 0.009925 | | | 0.03 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2853.00 ave 2853 max 2853 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 63574.0 ave 63574 max 63574 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 63574 Ave neighs/atom = 31.787000 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.989794447, Press = -0.277264240747407 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -2053.947 -2053.947 -2137.0654 -2137.0654 321.67673 321.67673 77183.237 77183.237 316.41529 316.41529 17000 -2052.705 -2052.705 -2133.1498 -2133.1498 311.3298 311.3298 77798.836 77798.836 -269.205 -269.205 Loop time of 29.486 on 1 procs for 1000 steps with 2000 atoms Performance: 2.930 ns/day, 8.191 hours/ns, 33.914 timesteps/s 73.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.157 | 29.157 | 29.157 | 0.0 | 98.88 Neigh | 0.07808 | 0.07808 | 0.07808 | 0.0 | 0.26 Comm | 0.060104 | 0.060104 | 0.060104 | 0.0 | 0.20 Output | 2.42e-05 | 2.42e-05 | 2.42e-05 | 0.0 | 0.00 Modify | 0.18082 | 0.18082 | 0.18082 | 0.0 | 0.61 Other | | 0.01004 | | | 0.03 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2854.00 ave 2854 max 2854 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62402.0 ave 62402 max 62402 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62402 Ave neighs/atom = 31.201000 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.183302167611, Press = 0.230087740431366 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -2052.705 -2052.705 -2133.1498 -2133.1498 311.3298 311.3298 77798.836 77798.836 -269.205 -269.205 18000 -2058.9176 -2058.9176 -2138.9927 -2138.9927 309.89902 309.89902 77462.105 77462.105 17.068212 17.068212 Loop time of 27.9859 on 1 procs for 1000 steps with 2000 atoms Performance: 3.087 ns/day, 7.774 hours/ns, 35.732 timesteps/s 77.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.796 | 27.796 | 27.796 | 0.0 | 99.32 Neigh | 0.06457 | 0.06457 | 0.06457 | 0.0 | 0.23 Comm | 0.020004 | 0.020004 | 0.020004 | 0.0 | 0.07 Output | 3.13e-05 | 3.13e-05 | 3.13e-05 | 0.0 | 0.00 Modify | 0.095469 | 0.095469 | 0.095469 | 0.0 | 0.34 Other | | 0.009919 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2842.00 ave 2842 max 2842 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62880.0 ave 62880 max 62880 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62880 Ave neighs/atom = 31.440000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.164823080406, Press = -0.396039183383833 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -2058.9176 -2058.9176 -2138.9927 -2138.9927 309.89902 309.89902 77462.105 77462.105 17.068212 17.068212 19000 -2059.0618 -2059.0618 -2138.7573 -2138.7573 308.4299 308.4299 77250.68 77250.68 219.10466 219.10466 Loop time of 24.9448 on 1 procs for 1000 steps with 2000 atoms Performance: 3.464 ns/day, 6.929 hours/ns, 40.089 timesteps/s 87.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.776 | 24.776 | 24.776 | 0.0 | 99.32 Neigh | 0.044134 | 0.044134 | 0.044134 | 0.0 | 0.18 Comm | 0.020122 | 0.020122 | 0.020122 | 0.0 | 0.08 Output | 3.18e-05 | 3.18e-05 | 3.18e-05 | 0.0 | 0.00 Modify | 0.09412 | 0.09412 | 0.09412 | 0.0 | 0.38 Other | | 0.01006 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2849.00 ave 2849 max 2849 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 63108.0 ave 63108 max 63108 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 63108 Ave neighs/atom = 31.554000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.126331943736, Press = 1.47369488250595 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -2059.0618 -2059.0618 -2138.7573 -2138.7573 308.4299 308.4299 77250.68 77250.68 219.10466 219.10466 20000 -2057.4044 -2057.4044 -2137.1689 -2137.1689 308.69667 308.69667 77952.372 77952.372 -412.94306 -412.94306 Loop time of 24.6708 on 1 procs for 1000 steps with 2000 atoms Performance: 3.502 ns/day, 6.853 hours/ns, 40.534 timesteps/s 87.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.486 | 24.486 | 24.486 | 0.0 | 99.25 Neigh | 0.063826 | 0.063826 | 0.063826 | 0.0 | 0.26 Comm | 0.021289 | 0.021289 | 0.021289 | 0.0 | 0.09 Output | 3.22e-05 | 3.22e-05 | 3.22e-05 | 0.0 | 0.00 Modify | 0.089327 | 0.089327 | 0.089327 | 0.0 | 0.36 Other | | 0.009936 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2853.00 ave 2853 max 2853 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62486.0 ave 62486 max 62486 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62486 Ave neighs/atom = 31.243000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.050236694657, Press = -1.25991214674569 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -2057.4044 -2057.4044 -2137.1689 -2137.1689 308.69667 308.69667 77952.372 77952.372 -412.94306 -412.94306 21000 -2057.9919 -2057.9919 -2138.2496 -2138.2496 310.60575 310.60575 77329.877 77329.877 187.86204 187.86204 Loop time of 24.2666 on 1 procs for 1000 steps with 2000 atoms Performance: 3.560 ns/day, 6.741 hours/ns, 41.209 timesteps/s 88.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.079 | 24.079 | 24.079 | 0.0 | 99.23 Neigh | 0.043587 | 0.043587 | 0.043587 | 0.0 | 0.18 Comm | 0.041078 | 0.041078 | 0.041078 | 0.0 | 0.17 Output | 5.83e-05 | 5.83e-05 | 5.83e-05 | 0.0 | 0.00 Modify | 0.092622 | 0.092622 | 0.092622 | 0.0 | 0.38 Other | | 0.01008 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2864.00 ave 2864 max 2864 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62950.0 ave 62950 max 62950 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62950 Ave neighs/atom = 31.475000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.026112391876, Press = -0.704455576258384 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -2057.9919 -2057.9919 -2138.2496 -2138.2496 310.60575 310.60575 77329.877 77329.877 187.86204 187.86204 22000 -2053.7316 -2053.7316 -2136.1794 -2136.1794 319.08159 319.08159 77501.187 77501.187 91.039304 91.039304 Loop time of 24.8965 on 1 procs for 1000 steps with 2000 atoms Performance: 3.470 ns/day, 6.916 hours/ns, 40.166 timesteps/s 86.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.675 | 24.675 | 24.675 | 0.0 | 99.11 Neigh | 0.084676 | 0.084676 | 0.084676 | 0.0 | 0.34 Comm | 0.02009 | 0.02009 | 0.02009 | 0.0 | 0.08 Output | 3.11e-05 | 3.11e-05 | 3.11e-05 | 0.0 | 0.00 Modify | 0.10654 | 0.10654 | 0.10654 | 0.0 | 0.43 Other | | 0.01009 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2827.00 ave 2827 max 2827 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62972.0 ave 62972 max 62972 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62972 Ave neighs/atom = 31.486000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.955837190407, Press = 0.243855135316867 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -2053.7316 -2053.7316 -2136.1794 -2136.1794 319.08159 319.08159 77501.187 77501.187 91.039304 91.039304 23000 -2055.0213 -2055.0213 -2136.6422 -2136.6422 315.88129 315.88129 77693.89 77693.89 -85.957402 -85.957402 Loop time of 23.7013 on 1 procs for 1000 steps with 2000 atoms Performance: 3.645 ns/day, 6.584 hours/ns, 42.192 timesteps/s 90.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 23.499 | 23.499 | 23.499 | 0.0 | 99.14 Neigh | 0.063218 | 0.063218 | 0.063218 | 0.0 | 0.27 Comm | 0.019801 | 0.019801 | 0.019801 | 0.0 | 0.08 Output | 2.78e-05 | 2.78e-05 | 2.78e-05 | 0.0 | 0.00 Modify | 0.089875 | 0.089875 | 0.089875 | 0.0 | 0.38 Other | | 0.02985 | | | 0.13 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2846.00 ave 2846 max 2846 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62636.0 ave 62636 max 62636 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62636 Ave neighs/atom = 31.318000 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 77502.1300119198 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0